View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1274_low_120 (Length: 204)
Name: NF1274_low_120
Description: NF1274
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1274_low_120 |
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Alignment Details
Target: chr7 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 46230885 - 46230737
Alignment:
| Q |
19 |
aaagaattcaacatcttatcaatttcatcaataagagaggacaacgtttaatnnnnnnnnnnnnnnnnnnnntgctcataacatacggaggaataaattg |
118 |
Q |
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| T |
46230885 |
aaagaattcaacatcttatcaatttcatcactaagagaggacaacgtttaataaaaaaaaaaaa--------tgctcataacatacggaggaataaattg |
46230794 |
T |
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| Q |
119 |
catcaccgatttgatgagaacttctcataccggcttgagataagcccttgctactcc |
175 |
Q |
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| T |
46230793 |
catcaccgatttgatgagaacttctcataccggcttgagataagcccttgctactcc |
46230737 |
T |
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