View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1274_low_16 (Length: 560)

Name: NF1274_low_16
Description: NF1274
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1274_low_16
NF1274_low_16
[»] chr8 (15 HSPs)
chr8 (140-226)||(15647357-15647442)
chr8 (140-191)||(15623602-15623653)
chr8 (29-70)||(444449-444490)
chr8 (29-70)||(38763499-38763540)
chr8 (29-70)||(39433446-39433487)
chr8 (29-70)||(1244689-1244730)
chr8 (29-70)||(2554196-2554237)
chr8 (29-70)||(6953945-6953986)
chr8 (29-66)||(9055393-9055430)
chr8 (29-70)||(38195251-38195292)
chr8 (29-70)||(44356803-44356844)
chr8 (26-70)||(13577110-13577153)
chr8 (30-70)||(13653733-13653773)
chr8 (30-70)||(13712376-13712416)
chr8 (29-69)||(22975839-22975879)
[»] chr4 (20 HSPs)
chr4 (29-70)||(23247582-23247623)
chr4 (29-70)||(3936663-3936704)
chr4 (29-70)||(11144649-11144690)
chr4 (29-70)||(10006376-10006417)
chr4 (29-70)||(10035301-10035342)
chr4 (29-70)||(11198364-11198405)
chr4 (29-70)||(16431652-16431693)
chr4 (29-70)||(17729462-17729503)
chr4 (29-70)||(24664975-24665016)
chr4 (29-70)||(25101374-25101415)
chr4 (29-70)||(32139376-32139417)
chr4 (29-70)||(32180866-32180907)
chr4 (29-70)||(35287491-35287532)
chr4 (29-70)||(38374993-38375034)
chr4 (29-70)||(46120016-46120056)
chr4 (29-70)||(46133150-46133190)
chr4 (29-70)||(49041965-49042006)
chr4 (29-70)||(56361797-56361838)
chr4 (29-70)||(56497592-56497633)
chr4 (34-70)||(49339691-49339727)
[»] chr2 (18 HSPs)
chr2 (29-70)||(2257007-2257048)
chr2 (29-70)||(12599849-12599890)
chr2 (29-70)||(21258652-21258693)
chr2 (29-73)||(27411128-27411172)
chr2 (29-64)||(19595468-19595503)
chr2 (29-71)||(21482502-21482544)
chr2 (29-70)||(4121997-4122038)
chr2 (29-70)||(9383193-9383234)
chr2 (29-70)||(13143144-13143185)
chr2 (29-70)||(15447698-15447739)
chr2 (29-70)||(16390639-16390680)
chr2 (29-70)||(20455927-20455968)
chr2 (29-70)||(24393281-24393322)
chr2 (29-70)||(24592830-24592871)
chr2 (29-70)||(34903553-34903594)
chr2 (29-70)||(36648774-36648815)
chr2 (29-70)||(41859888-41859929)
chr2 (29-70)||(44746583-44746624)
[»] scaffold0100 (1 HSPs)
scaffold0100 (32-70)||(31322-31360)
[»] chr5 (11 HSPs)
chr5 (28-70)||(10032258-10032300)
chr5 (29-79)||(781899-781949)
chr5 (29-70)||(6489043-6489084)
chr5 (29-70)||(6624812-6624853)
chr5 (29-70)||(8024437-8024478)
chr5 (29-70)||(9893655-9893696)
chr5 (29-70)||(13777781-13777822)
chr5 (29-70)||(26590743-26590784)
chr5 (29-70)||(32737820-32737861)
chr5 (29-70)||(37932366-37932407)
chr5 (29-70)||(40715933-40715974)
[»] scaffold0393 (1 HSPs)
scaffold0393 (29-70)||(14800-14841)
[»] chr6 (9 HSPs)
chr6 (29-70)||(12700405-12700446)
chr6 (29-63)||(26400900-26400934)
chr6 (29-70)||(1428830-1428871)
chr6 (29-70)||(2473639-2473680)
chr6 (29-70)||(2726401-2726442)
chr6 (29-70)||(8569745-8569786)
chr6 (29-70)||(12582213-12582254)
chr6 (29-70)||(21598993-21599034)
chr6 (29-70)||(27907935-27907976)
[»] chr3 (20 HSPs)
chr3 (29-70)||(2153485-2153526)
chr3 (29-70)||(4947810-4947851)
chr3 (29-70)||(25441484-25441525)
chr3 (29-70)||(25730438-25730479)
chr3 (29-70)||(28130918-28130959)
chr3 (29-70)||(44582761-44582802)
chr3 (29-70)||(53996335-53996376)
chr3 (30-68)||(14149532-14149570)
chr3 (29-59)||(21506753-21506783)
chr3 (30-72)||(21513325-21513367)
chr3 (29-70)||(334831-334872)
chr3 (29-70)||(6835835-6835876)
chr3 (29-70)||(8075821-8075862)
chr3 (29-70)||(8238600-8238641)
chr3 (29-70)||(13829061-13829102)
chr3 (29-70)||(14827561-14827602)
chr3 (29-70)||(32843246-32843287)
chr3 (29-70)||(35863797-35863838)
chr3 (29-70)||(48849747-48849788)
chr3 (29-70)||(52089352-52089393)
[»] chr1 (18 HSPs)
chr1 (29-70)||(41973291-41973332)
chr1 (29-64)||(24752637-24752672)
chr1 (31-70)||(34766898-34766937)
chr1 (29-72)||(45774611-45774654)
chr1 (29-67)||(5280667-5280705)
chr1 (29-70)||(127110-127151)
chr1 (29-70)||(4715542-4715583)
chr1 (29-70)||(6423745-6423786)
chr1 (29-70)||(8736471-8736512)
chr1 (29-70)||(11354002-11354043)
chr1 (29-70)||(16033434-16033475)
chr1 (29-70)||(29233958-29233999)
chr1 (29-70)||(35778185-35778226)
chr1 (29-70)||(39452497-39452538)
chr1 (29-70)||(40227865-40227906)
chr1 (29-70)||(41884789-41884830)
chr1 (29-69)||(14520980-14521020)
chr1 (30-70)||(42767050-42767090)
[»] chr7 (14 HSPs)
chr7 (31-70)||(31292753-31292792)
chr7 (29-70)||(5804797-5804838)
chr7 (29-70)||(8084463-8084504)
chr7 (29-70)||(12823249-12823290)
chr7 (29-70)||(16577844-16577885)
chr7 (29-70)||(16587777-16587818)
chr7 (29-70)||(20243292-20243333)
chr7 (29-70)||(22690020-22690061)
chr7 (29-70)||(26009312-26009353)
chr7 (29-70)||(27462420-27462461)
chr7 (29-70)||(37624579-37624620)
chr7 (29-70)||(38438833-38438874)
chr7 (29-70)||(44558759-44558799)
chr7 (30-70)||(31038506-31038546)
[»] scaffold0458 (1 HSPs)
scaffold0458 (29-70)||(11135-11176)
[»] scaffold0328 (1 HSPs)
scaffold0328 (29-70)||(7016-7057)
[»] scaffold0262 (1 HSPs)
scaffold0262 (29-70)||(15914-15955)
[»] scaffold0118 (1 HSPs)
scaffold0118 (29-70)||(45448-45489)
[»] scaffold0050 (1 HSPs)
scaffold0050 (29-70)||(53364-53405)
[»] scaffold0026 (1 HSPs)
scaffold0026 (29-70)||(75361-75402)


Alignment Details
Target: chr8 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 15647442 - 15647357
Alignment:
Q  140 aacagcaataatatataagccaaaacagcacttctgaaggagagaaggctgacgtgcaaaacagcaacaacacaggccctgatcctg 226  Q
    ||||||| ||||||||||||||||||||||| ||| ||| |||||||||||| | ||| | || ||| ||||||||||||| |||||    
T  15647442 aacagcattaatatataagccaaaacagcacctctcaagcagagaaggctgaggcgcagagcaacaa-aacacaggccctggtcctg 15647357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 140 - 191
Target Start/End: Complemental strand, 15623653 - 15623602
Alignment:
Q  140 aacagcaataatatataagccaaaacagcacttctgaaggagagaaggctga 191  Q
    ||||||| ||||||||||||||||||||||| ||| ||| ||||||||||||    
T  15623653 aacagcattaatatataagccaaaacagcacctctcaagcagagaaggctga 15623602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 444449 - 444490
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  444449 atatgcaaggtccggggtttaaaccccggccaccacaaaaaa 444490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 38763540 - 38763499
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    ||||||||||||||||||| |||||| |||||||||||||||    
T  38763540 atatgcaaggtctggggttcgaaccctggccaccacaaaaaa 38763499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 39433446 - 39433487
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    ||||||||||||||||||| |||| |||||||||||||||||    
T  39433446 atatgcaaggtctggggttcgaacgccggccaccacaaaaaa 39433487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 1244730 - 1244689
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||| |||||||||||||| ||||||||| ||||||||||||    
T  1244730 atatacaaggtctggggttcgaaccccggacaccacaaaaaa 1244689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 2554237 - 2554196
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    ||||||||||||||||||| ||| || |||||||||||||||    
T  2554237 atatgcaaggtctggggttcgaatcctggccaccacaaaaaa 2554196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 6953945 - 6953986
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||||| |||| |||||||| |||||||||||||    
T  6953945 atatgcaaggtctgtggttcgaaccccgaccaccacaaaaaa 6953986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 9055430 - 9055393
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaa 66  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  9055430 atatgcaaggtctggggtttgaacctcggacaccacaa 9055393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 38195292 - 38195251
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||||| | ||| |||||||||||||||||||||    
T  38195292 atatgcaaggtctgagatttaaaccccggccaccacaaaaaa 38195251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 44356844 - 44356803
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||| |||||| ||||||| ||||||||||||||    
T  44356844 atatgcaaggtccggggttcgaaccccagccaccacaaaaaa 44356803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 13577110 - 13577153
Alignment:
Q  26 atcatatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||||||||| ||| |||||||| |||||||||||||    
T  13577110 atcatatgcaaggtctggagtt-gaaccccgaccaccacaaaaaa 13577153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 70
Target Start/End: Complemental strand, 13653773 - 13653733
Alignment:
Q  30 tatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||| |||||  |||||||||||||||||||||    
T  13653773 tatgcaaggtctagggttcaaaccccggccaccacaaaaaa 13653733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 70
Target Start/End: Complemental strand, 13712416 - 13712376
Alignment:
Q  30 tatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||| |||||  |||||||||||||||||||||    
T  13712416 tatgcaaggtctagggttcaaaccccggccaccacaaaaaa 13712376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 22975839 - 22975879
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaa 69  Q
    |||||||||||||||||||| |||||| |||||||| ||||    
T  22975839 atatgcaaggtctggggtttaaaccccagccaccaccaaaa 22975879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000003; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 23247623 - 23247582
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  23247623 atatgcaaggtctggggtttaaaccccggccaccacaaaaaa 23247582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 3936663 - 3936704
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||| |||||| ||||||||||||||||||||||    
T  3936663 atatgcaaggtccggggttcgaaccccggccaccacaaaaaa 3936704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 11144690 - 11144649
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    ||||||||||||||||||||||||||||| |||||| |||||    
T  11144690 atatgcaaggtctggggtttgaaccccggacaccaccaaaaa 11144649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 10006376 - 10006417
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    ||||||||||||||||||| |||  |||||||||||||||||    
T  10006376 atatgcaaggtctggggttcgaataccggccaccacaaaaaa 10006417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 10035301 - 10035342
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||||||||||  ||||||||||||||| |||||    
T  10035301 atatgcaaggtctggggttcaaaccccggccaccactaaaaa 10035342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 11198364 - 11198405
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||| ||||||  |||||||||||||||||||||    
T  11198364 atatgcaaggtccggggttcaaaccccggccaccacaaaaaa 11198405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 16431652 - 16431693
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||||||||||  |||||||||| ||||||||||    
T  16431652 atatgcaaggtctggggttcaaaccccggcctccacaaaaaa 16431693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 17729462 - 17729503
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||||||||||  ||||||| |||||||||||||    
T  17729462 atatgcaaggtctggggttcaaaccccgaccaccacaaaaaa 17729503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 24665016 - 24664975
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||| |||||| |||||||| |||||||||||||    
T  24665016 atatgcaaggtccggggttcgaaccccgaccaccacaaaaaa 24664975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 25101415 - 25101374
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    ||||||||||   |||||||||||||||||||||||||||||    
T  25101415 atatgcaagggtcggggtttgaaccccggccaccacaaaaaa 25101374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 32139376 - 32139417
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||| |||||| ||||||||| ||||||||||||    
T  32139376 atatgcaaggtccggggttcgaaccccggacaccacaaaaaa 32139417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 32180866 - 32180907
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||| |||||||||| |||||||| |||||||||||||    
T  32180866 atatgcaaagtctggggttcgaaccccgaccaccacaaaaaa 32180907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 35287532 - 35287491
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||| ||||||  |||||||||||||||||||||    
T  35287532 atatgcaaggtccggggttccaaccccggccaccacaaaaaa 35287491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 38374993 - 38375034
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    ||||||||||||||| |||  |||||||||||||||||||||    
T  38374993 atatgcaaggtctggagttcaaaccccggccaccacaaaaaa 38375034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 46120056 - 46120016
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||| |||||||| ||||||||||||||||||||||    
T  46120056 atatgcaagg-ctggggttcgaaccccggccaccacaaaaaa 46120016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 46133190 - 46133150
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||| |||||||| ||||||||||||||||||||||    
T  46133190 atatgcaagg-ctggggttcgaaccccggccaccacaaaaaa 46133150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 49042006 - 49041965
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||| ||||||  |||||||||||||||||||||    
T  49042006 atatgcaaggtccggggttcaaaccccggccaccacaaaaaa 49041965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 56361838 - 56361797
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||| |||||||| ||||| ||||||||||||||||||||||    
T  56361838 atatacaaggtctagggttcgaaccccggccaccacaaaaaa 56361797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 56497633 - 56497592
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    ||||||||||||||||||| ||| |||||||||||| |||||    
T  56497633 atatgcaaggtctggggttcgaatcccggccaccaccaaaaa 56497592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 49339691 - 49339727
Alignment:
Q  34 caaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||||| ||| ||||||||||||||||||    
T  49339691 caaggtctggggttcgaatcccggccaccacaaaaaa 49339727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000003; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 2257007 - 2257048
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  2257007 atatgcaaggtctggggttcgaaccccggccaccacaaaaaa 2257048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 12599890 - 12599849
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    ||||||||||||||||||| |||||||| |||||||||||||    
T  12599890 atatgcaaggtctggggttcgaaccccgaccaccacaaaaaa 12599849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 21258652 - 21258693
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    ||||||||||||||||||| ||| ||||||||||||||||||    
T  21258652 atatgcaaggtctggggttcgaatcccggccaccacaaaaaa 21258693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 27411128 - 27411172
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaatat 73  Q
    |||||||||||| |||||| |||||||||||||||| ||||||||    
T  27411128 atatgcaaggtccggggttcgaaccccggccaccaccaaaaatat 27411172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 64
Target Start/End: Complemental strand, 19595503 - 19595468
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccac 64  Q
    ||||||||||||||||||| ||||||||||||||||    
T  19595503 atatgcaaggtctggggttcgaaccccggccaccac 19595468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 21482544 - 21482502
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaat 71  Q
    |||||||||||| ||||||||||||||| ||||||| ||||||    
T  21482544 atatgcaaggtccggggtttgaaccccgaccaccaccaaaaat 21482502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 4122038 - 4121997
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||||||||||| || ||||||| ||||||||||    
T  4122038 atatgcaaggtctggggtttaaatcccggcctccacaaaaaa 4121997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 9383234 - 9383193
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    ||||||||||| |||||||| |||||| ||||||||||||||    
T  9383234 atatgcaaggtttggggtttcaacccctgccaccacaaaaaa 9383193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 13143144 - 13143185
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||| ||||||||||||| | |||||||||||||    
T  13143144 atatgcaaggtcgggggtttgaaccctgaccaccacaaaaaa 13143185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 15447739 - 15447698
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    ||||||||||||||| |||  |||||||||||||||||||||    
T  15447739 atatgcaaggtctggagttcaaaccccggccaccacaaaaaa 15447698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 16390639 - 16390680
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||| |||||| |||||||||||||||| |||||    
T  16390639 atatgcaaggtccggggttcgaaccccggccaccaccaaaaa 16390680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 20455927 - 20455968
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||| |||||| ||| ||||||||||||||||||    
T  20455927 atatgcaaggtccggggttcgaatcccggccaccacaaaaaa 20455968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 24393281 - 24393322
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||||| |||| ||||||||| ||||||||||||    
T  24393281 atatgcaaggtctgaggttcgaaccccggacaccacaaaaaa 24393322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 24592871 - 24592830
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||||||||||  ||||||||||||||| |||||    
T  24592871 atatgcaaggtctggggttcaaaccccggccaccaccaaaaa 24592830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 34903553 - 34903594
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||||| |||| ||||||||| ||||||||||||    
T  34903553 atatgcaaggtctgaggttcgaaccccggacaccacaaaaaa 34903594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 36648815 - 36648774
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    ||||||||||||| |||||| ||||||| |||||||||||||    
T  36648815 atatgcaaggtctagggtttaaaccccgaccaccacaaaaaa 36648774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 41859888 - 41859929
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||||||||||  |||||||||||||| ||||||    
T  41859888 atatgcaaggtctggggttcaaaccccggccaccataaaaaa 41859929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 44746583 - 44746624
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||| ||| |||||| ||||||||||||||||||||||    
T  44746583 atatgcaaagtccggggttcgaaccccggccaccacaaaaaa 44746624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 70
Target Start/End: Complemental strand, 31360 - 31322
Alignment:
Q  32 tgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  31360 tgcaaggtctggggttcgaaccccggccaccacaaaaaa 31322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000002; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 10032300 - 10032258
Alignment:
Q  28 catatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||| |||||||||||| |||||||||||||||||    
T  10032300 catatgcaaggtttggggtttgaactccggccaccacaaaaaa 10032258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 781899 - 781949
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaatatcatgaa 79  Q
    ||||||||||||||||||| |||||| | ||||||||||||| || |||||    
T  781899 atatgcaaggtctggggttcgaaccctgaccaccacaaaaaaaatgatgaa 781949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 6489043 - 6489084
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||||||||||  ||||||||||||||| |||||    
T  6489043 atatgcaaggtctggggttcaaaccccggccaccaccaaaaa 6489084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 6624812 - 6624853
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||| |||||| |||||||||||||||| |||||    
T  6624812 atatgcaaggtccggggttcgaaccccggccaccaccaaaaa 6624853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 8024437 - 8024478
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    ||||||||||||  |||||||||||||| |||||||||||||    
T  8024437 atatgcaaggtcctgggtttgaaccccgaccaccacaaaaaa 8024478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 9893696 - 9893655
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||||||||||  |||||| ||||||||||||||    
T  9893696 atatgcaaggtctggggttcaaaccccagccaccacaaaaaa 9893655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 13777822 - 13777781
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||||||||||||||||| || ||||| ||||||    
T  13777822 atatgcaaggtctggggtttgaaccctggacaccaaaaaaaa 13777781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 26590743 - 26590784
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    ||||||||||||||||||||||| ||||||||| || |||||    
T  26590743 atatgcaaggtctggggtttgaatcccggccactaccaaaaa 26590784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 32737861 - 32737820
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||| |||||||||| |||| |||||||||||||||||    
T  32737861 atatgcaaagtctggggttcgaactccggccaccacaaaaaa 32737820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 37932366 - 37932407
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||| |||||| |||||| |||||||||||||||    
T  37932366 atatgcaaggtccggggttcgaaccctggccaccacaaaaaa 37932407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 40715974 - 40715933
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||| ||||||  |||||||||||||||||||||    
T  40715974 atatgcaaggtccggggttcaaaccccggccaccacaaaaaa 40715933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 14841 - 14800
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||| |||||||||||||||||||||| ||||||    
T  14841 atatgcaaggtccggggtttgaaccccggccaccataaaaaa 14800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000008; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 12700446 - 12700405
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    ||||||||||||| |||||||||||||||||||||| |||||    
T  12700446 atatgcaaggtctagggtttgaaccccggccaccaccaaaaa 12700405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 26400900 - 26400934
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccacca 63  Q
    |||||||||||| ||||||||||||||||||||||    
T  26400900 atatgcaaggtccggggtttgaaccccggccacca 26400934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 1428830 - 1428871
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||| || |||||||| |||||||||||||||||||||    
T  1428830 atatgcaatgtttggggtttaaaccccggccaccacaaaaaa 1428871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 2473639 - 2473680
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    ||||||||||| |||||||| ||||||||||| |||||||||    
T  2473639 atatgcaaggtatggggtttaaaccccggccatcacaaaaaa 2473680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 2726442 - 2726401
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||| |||||| ||||||||| ||||||||||||    
T  2726442 atatgcaaggtccggggttcgaaccccggtcaccacaaaaaa 2726401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 8569745 - 8569786
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||| ||||||  |||||||||||||||||||||    
T  8569745 atatgcaaggtccggggttcaaaccccggccaccacaaaaaa 8569786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 12582254 - 12582213
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    ||||||||||||||| |||  |||||||||||||||||||||    
T  12582254 atatgcaaggtctggagttcaaaccccggccaccacaaaaaa 12582213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 21598993 - 21599034
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||  ||||||| |||||||||||||||||||||    
T  21598993 atatgcaaggtacggggtttaaaccccggccaccacaaaaaa 21599034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 27907976 - 27907935
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||||||||||  ||||||||||||||| |||||    
T  27907976 atatgcaaggtctggggttcaaaccccggccaccaccaaaaa 27907935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000008; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 2153526 - 2153485
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||||||||||| ||||| |||||||||||||||    
T  2153526 atatgcaaggtctggggtttaaaccctggccaccacaaaaaa 2153485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 4947851 - 4947810
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    ||||| |||||||||||||||||||||| |||||||||||||    
T  4947851 atatgtaaggtctggggtttgaaccccgaccaccacaaaaaa 4947810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 25441525 - 25441484
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||||||||||  |||||||||||||||||||||    
T  25441525 atatgcaaggtctggggttcaaaccccggccaccacaaaaaa 25441484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 25730438 - 25730479
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||| |||||||||||||| ||||||||||||||||||||||    
T  25730438 atatacaaggtctggggttcgaaccccggccaccacaaaaaa 25730479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 28130959 - 28130918
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    ||||||||||||||||||||||| ||||| ||||||||||||    
T  28130959 atatgcaaggtctggggtttgaatcccggacaccacaaaaaa 28130918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 44582761 - 44582802
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||| |||||| ||||||||||||||||||||||    
T  44582761 atatgcaaggtccggggttcgaaccccggccaccacaaaaaa 44582802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 53996335 - 53996376
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    ||||||||||||||||||| ||| ||||||||||||||||||    
T  53996335 atatgcaaggtctggggttcgaatcccggccaccacaaaaaa 53996376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 30 - 68
Target Start/End: Complemental strand, 14149570 - 14149532
Alignment:
Q  30 tatgcaaggtctggggtttgaaccccggccaccacaaaa 68  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  14149570 tatgcaaggtctggggttcgaaccccggacaccacaaaa 14149532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 29 - 59
Target Start/End: Complemental strand, 21506783 - 21506753
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggcc 59  Q
    |||||||||||||||||||||||||||||||    
T  21506783 atatgcaaggtctggggtttgaaccccggcc 21506753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 30 - 72
Target Start/End: Original strand, 21513325 - 21513367
Alignment:
Q  30 tatgcaaggtctggggtttgaaccccggccaccacaaaaaata 72  Q
    |||||||||||||||||| ||| ||| ||||||||||||||||    
T  21513325 tatgcaaggtctggggttcgaatcccagccaccacaaaaaata 21513367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 334872 - 334831
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||| ||||||  |||||||||||||||||||||    
T  334872 atatgcaaggtccggggttcaaaccccggccaccacaaaaaa 334831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 6835876 - 6835835
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    ||||||||||||| ||||| |||||||| |||||||||||||    
T  6835876 atatgcaaggtctagggttcgaaccccgaccaccacaaaaaa 6835835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 8075821 - 8075862
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||||| ||||  |||||||||||||||||||||    
T  8075821 atatgcaaggtctgaggttcaaaccccggccaccacaaaaaa 8075862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 8238600 - 8238641
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||||||||||  ||| |||||||||||||||||    
T  8238600 atatgcaaggtctggggttcaaactccggccaccacaaaaaa 8238641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 13829102 - 13829061
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    ||||||||||||||||||| ||||||| ||||||| ||||||    
T  13829102 atatgcaaggtctggggttcgaacccctgccaccataaaaaa 13829061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 14827561 - 14827602
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    ||||||||| || ||||||| |||||||||||||||||||||    
T  14827561 atatgcaagatccggggtttaaaccccggccaccacaaaaaa 14827602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 32843287 - 32843246
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||||||||||  |||||||||||||||| ||||    
T  32843287 atatgcaaggtctggggttcaaaccccggccaccacacaaaa 32843246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 35863838 - 35863797
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||||||||||  |||| ||||||||||||||||    
T  35863838 atatgcaaggtctggggttcaaacctcggccaccacaaaaaa 35863797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 48849788 - 48849747
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||| ||||||  |||||||||||||||||||||    
T  48849788 atatgcaaggtccggggttcaaaccccggccaccacaaaaaa 48849747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 52089352 - 52089393
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    ||||||||||| ||||||| |||||||||||| |||||||||    
T  52089352 atatgcaaggtttggggttcgaaccccggccatcacaaaaaa 52089393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000008; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 41973291 - 41973332
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||| |||||| ||||||||||||||||||||||    
T  41973291 atatgcaaggtccggggttcgaaccccggccaccacaaaaaa 41973332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 64
Target Start/End: Complemental strand, 24752672 - 24752637
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccac 64  Q
    ||||||||||||||||||| ||||||||||||||||    
T  24752672 atatgcaaggtctggggttcgaaccccggccaccac 24752637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 70
Target Start/End: Original strand, 34766898 - 34766937
Alignment:
Q  31 atgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    ||||||||||||||||| ||||| ||||||||||||||||    
T  34766898 atgcaaggtctggggttcgaacctcggccaccacaaaaaa 34766937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 45774611 - 45774654
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaata 72  Q
    |||||||||||| |||||| ||||||| ||||||||||||||||    
T  45774611 atatgcaaggtccggggttcgaaccccagccaccacaaaaaata 45774654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 29 - 67
Target Start/End: Original strand, 5280667 - 5280705
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaa 67  Q
    ||||||||||||||||||| |||||||| ||||||||||    
T  5280667 atatgcaaggtctggggttcgaaccccgaccaccacaaa 5280705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 127110 - 127151
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||| ||||||| || ||||||||||||||||||    
T  127110 atatgcaaggtccggggtttaaatcccggccaccacaaaaaa 127151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 4715583 - 4715542
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    ||||||||||| ||||||| ||||| ||||||||||||||||    
T  4715583 atatgcaaggtttggggttcgaacctcggccaccacaaaaaa 4715542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 6423786 - 6423745
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||| ||||||  |||||||||||||||||||||    
T  6423786 atatgcaaggtccggggttcaaaccccggccaccacaaaaaa 6423745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 8736471 - 8736512
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||| ||||||  |||||||||||||||||||||    
T  8736471 atatgcaaggtccggggttcaaaccccggccaccacaaaaaa 8736512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 11354043 - 11354002
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    ||||||||||||||||||||||||||||| || || ||||||    
T  11354043 atatgcaaggtctggggtttgaaccccggacagcaaaaaaaa 11354002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 16033475 - 16033434
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||||||||||  ||| |||||||||||||||||    
T  16033475 atatgcaaggtctggggttcaaactccggccaccacaaaaaa 16033434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 29233999 - 29233958
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    ||||||||||||||||||| |||||||  |||||||||||||    
T  29233999 atatgcaaggtctggggttcgaaccccaaccaccacaaaaaa 29233958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 35778226 - 35778185
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||||| |||| |||||||||||||||| |||||    
T  35778226 atatgcaaggtctgaggttcgaaccccggccaccaccaaaaa 35778185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 39452497 - 39452538
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||||||| ||  |||||||||||||||||||||    
T  39452497 atatgcaaggtctgggattcaaaccccggccaccacaaaaaa 39452538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 40227865 - 40227906
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||| |||||||||||||| |||||||| |||||||||||||    
T  40227865 atatacaaggtctggggttcgaaccccgaccaccacaaaaaa 40227906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 41884830 - 41884789
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||| ||||||| |||||| ||||||||||||||||||||||    
T  41884830 atatacaaggtccggggttcgaaccccggccaccacaaaaaa 41884789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 14520980 - 14521020
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaa 69  Q
    |||||||| || ||||||| |||||||||||||||||||||    
T  14520980 atatgcaaagtttggggttcgaaccccggccaccacaaaaa 14521020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 70
Target Start/End: Original strand, 42767050 - 42767090
Alignment:
Q  30 tatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    ||||||| ||||||||||| |||||||||||| ||||||||    
T  42767050 tatgcaaagtctggggtttaaaccccggccactacaaaaaa 42767090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 32; Significance: 0.00000001; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 70
Target Start/End: Complemental strand, 31292792 - 31292753
Alignment:
Q  31 atgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    ||||||||||||||||| |||| |||||||||||||||||    
T  31292792 atgcaaggtctggggttcgaactccggccaccacaaaaaa 31292753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 5804797 - 5804838
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    ||||||||||||  ||||| ||||||||||||||||||||||    
T  5804797 atatgcaaggtccagggttcgaaccccggccaccacaaaaaa 5804838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 8084463 - 8084504
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||| |||||| |||||||||||||||| |||||    
T  8084463 atatgcaaggtccggggttcgaaccccggccaccaccaaaaa 8084504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 12823290 - 12823249
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||||||||||  || ||||||||||||||||||    
T  12823290 atatgcaaggtctggggttcaaatcccggccaccacaaaaaa 12823249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 16577885 - 16577844
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||||||||||  |||| ||||||||||||||||    
T  16577885 atatgcaaggtctggggttcaaacctcggccaccacaaaaaa 16577844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 16587777 - 16587818
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||||||||||  |||| ||||||||||||||||    
T  16587777 atatgcaaggtctggggttcaaacctcggccaccacaaaaaa 16587818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 20243292 - 20243333
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||| |||||||||||||||| |||||| |||||    
T  20243292 atatgcaaggtccggggtttgaaccccggacaccaccaaaaa 20243333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 22690061 - 22690020
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    ||||||||||| ||||||| ||||||||| ||||||||||||    
T  22690061 atatgcaaggtttggggttcgaaccccggacaccacaaaaaa 22690020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 26009312 - 26009353
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    ||||||||||||||||||| |||| |||| ||||||||||||    
T  26009312 atatgcaaggtctggggttcgaactccggacaccacaaaaaa 26009353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 27462461 - 27462420
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||| ||||||  |||||||||||||||||||||    
T  27462461 atatgcaaggtccggggttcaaaccccggccaccacaaaaaa 27462420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 37624579 - 37624620
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||| |||||| ||| ||||||||||||||||||    
T  37624579 atatgcaaggtcgggggttcgaatcccggccaccacaaaaaa 37624620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 38438833 - 38438874
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    ||||||||||| | ||||||||||||||| ||||||||||||    
T  38438833 atatgcaaggtattgggtttgaaccccgggcaccacaaaaaa 38438874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 44558799 - 44558759
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||||| ||||||| |||||||||||||||||||    
T  44558799 atatgcaaggtctgaggtttga-ccccggccaccacaaaaaa 44558759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 70
Target Start/End: Complemental strand, 31038546 - 31038506
Alignment:
Q  30 tatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    ||||||||||||||||||  ||||||||||||||| |||||    
T  31038546 tatgcaaggtctggggttcaaaccccggccaccaccaaaaa 31038506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0458 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0458
Description:

Target: scaffold0458; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 11176 - 11135
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||||||| ||  |||||||||||||||||||||    
T  11176 atatgcaaggtctgggattcaaaccccggccaccacaaaaaa 11135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 7016 - 7057
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    ||||| ||||||||||||| ||| ||||||||||||||||||    
T  7016 atatgtaaggtctggggttcgaatcccggccaccacaaaaaa 7057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 15955 - 15914
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||||||||||  |||||| ||||||||||||||    
T  15955 atatgcaaggtctggggttcaaaccccagccaccacaaaaaa 15914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 45448 - 45489
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||| ||||||||||||  |||||||||||||||    
T  45448 atatgcaaggtccggggtttgaaccttggccaccacaaaaaa 45489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 53405 - 53364
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||||||||||  ||||||| |||||||||||||    
T  53405 atatgcaaggtctggggttcaaaccccgaccaccacaaaaaa 53364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 75361 - 75402
Alignment:
Q  29 atatgcaaggtctggggtttgaaccccggccaccacaaaaaa 70  Q
    |||||||||||| |||||| ||| ||||||||||||||||||    
T  75361 atatgcaaggtccggggttcgaatcccggccaccacaaaaaa 75402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University