View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1274_low_37 (Length: 413)
Name: NF1274_low_37
Description: NF1274
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1274_low_37 |
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Alignment Details
Target: chr7 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 92 - 402
Target Start/End: Original strand, 248700 - 249010
Alignment:
| Q |
92 |
gacaatacctcggaagaaattaaaatccaaatgaattaatttgagcataaggtagtattgatcatattttgaggtggcttgtaactaagagctcccaagc |
191 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
248700 |
gacaatacctcagaagaaattaaaatccaaatgaattaatttgagcataaggtagtattgatcatattttgaggtggcttgtaactaagagctcccaagc |
248799 |
T |
|
| Q |
192 |
tgtatacacataggttattctcttgttttaatatctgactacttcctgtgctcttcaagaaaggaacattgcaagaataagaagatgatgaagttcctat |
291 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
248800 |
tgtatacacataggttattctcttgttttaatatctgactacttcctgtgctcttcaagaaaggaacattgcaagaataagaagatgatgaagttcctat |
248899 |
T |
|
| Q |
292 |
caaggttgcttggcagagagacacaatctgtgaattaccatccatggcaattttacagttagttccatccactgatggtatatctaatttgtatgctccc |
391 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
248900 |
caagcttgcttggcagagagacacaatctgtgaattaccatccatggcaattttacagttagttccatccactgatggtatatctaatttgtatgctccc |
248999 |
T |
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| Q |
392 |
tctctgtctgt |
402 |
Q |
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||||||||||| |
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| T |
249000 |
tctctgtctgt |
249010 |
T |
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