View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1274_low_72 (Length: 281)

Name: NF1274_low_72
Description: NF1274
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1274_low_72
NF1274_low_72
[»] chr4 (55 HSPs)
chr4 (5-237)||(52824120-52824347)
chr4 (1-117)||(20435199-20435314)
chr4 (5-114)||(530732-530840)
chr4 (1-113)||(42274551-42274663)
chr4 (1-114)||(55107524-55107636)
chr4 (1-113)||(18417658-18417769)
chr4 (1-116)||(1298910-1299024)
chr4 (1-118)||(4552781-4552897)
chr4 (1-115)||(13204376-13204489)
chr4 (1-114)||(24969600-24969715)
chr4 (3-113)||(4688308-4688418)
chr4 (5-115)||(27434609-27434718)
chr4 (1-119)||(32318779-32318896)
chr4 (1-117)||(35360674-35360788)
chr4 (1-114)||(23928626-23928738)
chr4 (1-115)||(28809906-28810019)
chr4 (1-116)||(4894967-4895084)
chr4 (1-84)||(21048764-21048845)
chr4 (1-116)||(24915853-24915971)
chr4 (61-118)||(24969537-24969594)
chr4 (221-266)||(52824052-52824097)
chr4 (1-111)||(56552064-56552173)
chr4 (2-115)||(3422489-3422601)
chr4 (61-113)||(32318721-32318773)
chr4 (61-116)||(24915792-24915847)
chr4 (54-115)||(16995665-16995726)
chr4 (59-112)||(37525059-37525112)
chr4 (1-110)||(2272371-2272478)
chr4 (61-117)||(13204495-13204551)
chr4 (61-117)||(42274489-42274545)
chr4 (61-116)||(530667-530722)
chr4 (61-116)||(21048703-21048758)
chr4 (61-115)||(1299030-1299084)
chr4 (61-118)||(4552903-4552960)
chr4 (61-114)||(20435140-20435193)
chr4 (5-87)||(24294494-24294575)
chr4 (61-114)||(27434728-27434781)
chr4 (61-113)||(4688248-4688300)
chr4 (61-117)||(43486197-43486253)
chr4 (61-117)||(55107642-55107698)
chr4 (57-116)||(47465098-47465157)
chr4 (9-44)||(52587382-52587417)
chr4 (2-45)||(55049460-55049503)
chr4 (61-115)||(18417775-18417829)
chr4 (9-43)||(36030997-36031031)
chr4 (56-117)||(11330103-11330164)
chr4 (61-118)||(23928564-23928620)
chr4 (61-114)||(55049400-55049453)
chr4 (61-117)||(36030936-36030992)
chr4 (61-100)||(2272484-2272523)
chr4 (55-114)||(28573947-28574006)
chr4 (61-115)||(3422428-3422482)
chr4 (61-115)||(35360794-35360847)
chr4 (56-110)||(42020203-42020257)
chr4 (1-41)||(9355612-9355652)
[»] chr5 (54 HSPs)
chr5 (1-112)||(24397304-24397415)
chr5 (1-118)||(35420671-35420787)
chr5 (2-115)||(1138558-1138670)
chr5 (1-117)||(15855840-15855955)
chr5 (1-116)||(20476429-20476543)
chr5 (1-115)||(16472954-16473067)
chr5 (1-115)||(19976260-19976374)
chr5 (1-115)||(21259789-21259902)
chr5 (1-87)||(21261970-21262055)
chr5 (3-116)||(4265980-4266092)
chr5 (1-113)||(12744829-12744938)
chr5 (2-116)||(33629405-33629520)
chr5 (1-115)||(12807911-12808023)
chr5 (5-114)||(13754354-13754462)
chr5 (61-117)||(33629342-33629398)
chr5 (57-117)||(35420609-35420669)
chr5 (3-117)||(43539105-43539217)
chr5 (57-120)||(16473069-16473132)
chr5 (61-116)||(20476549-20476604)
chr5 (59-112)||(2255578-2255631)
chr5 (57-114)||(15855957-15856014)
chr5 (67-116)||(21259728-21259777)
chr5 (1-114)||(37655211-37655316)
chr5 (13-114)||(1164866-1164967)
chr5 (5-79)||(1456085-1456158)
chr5 (61-116)||(13754289-13754344)
chr5 (61-115)||(10132372-10132426)
chr5 (54-100)||(35806949-35806995)
chr5 (57-110)||(8364744-8364797)
chr5 (1-115)||(35276351-35276465)
chr5 (1-114)||(37552367-37552473)
chr5 (61-116)||(1138677-1138732)
chr5 (61-116)||(4266100-4266155)
chr5 (57-116)||(10132280-10132339)
chr5 (66-117)||(29141802-29141853)
chr5 (1-43)||(780853-780895)
chr5 (61-114)||(21591213-21591266)
chr5 (61-114)||(21595330-21595383)
chr5 (62-111)||(25751570-25751619)
chr5 (61-110)||(32623219-32623268)
chr5 (61-117)||(37552305-37552361)
chr5 (54-110)||(42522931-42522987)
chr5 (4-43)||(735346-735385)
chr5 (71-118)||(17583367-17583414)
chr5 (13-44)||(32623286-32623317)
chr5 (61-116)||(43539225-43539280)
chr5 (1-39)||(34513477-34513515)
chr5 (66-115)||(780915-780964)
chr5 (2-35)||(1384388-1384421)
chr5 (2-42)||(2538467-2538507)
chr5 (10-42)||(12257582-12257614)
chr5 (1-29)||(21591272-21591300)
chr5 (1-29)||(21595389-21595417)
chr5 (53-117)||(26152718-26152782)
[»] chr1 (72 HSPs)
chr1 (2-113)||(9978111-9978222)
chr1 (2-117)||(15324623-15324738)
chr1 (1-117)||(47940629-47940745)
chr1 (1-116)||(3607788-3607902)
chr1 (1-116)||(5189467-5189581)
chr1 (1-115)||(19797040-19797153)
chr1 (1-115)||(50627130-50627243)
chr1 (1-116)||(19954970-19955084)
chr1 (1-113)||(14387074-14387185)
chr1 (1-117)||(42561354-42561469)
chr1 (1-116)||(27240983-27241097)
chr1 (5-115)||(4299455-4299567)
chr1 (2-115)||(2854592-2854704)
chr1 (2-115)||(48954274-48954386)
chr1 (2-114)||(23698562-23698673)
chr1 (3-114)||(27928359-27928469)
chr1 (3-112)||(50162599-50162708)
chr1 (3-114)||(27926312-27926423)
chr1 (1-116)||(1387778-1387890)
chr1 (1-115)||(9895252-9895365)
chr1 (1-114)||(40647116-40647230)
chr1 (1-114)||(6079384-6079496)
chr1 (1-117)||(51789656-51789769)
chr1 (5-87)||(26208451-26208533)
chr1 (1-98)||(48645073-48645168)
chr1 (53-117)||(49285085-49285149)
chr1 (2-113)||(51276755-51276865)
chr1 (57-118)||(50627245-50627306)
chr1 (13-114)||(21930380-21930481)
chr1 (1-85)||(957617-957701)
chr1 (19-117)||(2125147-2125244)
chr1 (5-110)||(28243957-28244066)
chr1 (1-110)||(22339043-22339151)
chr1 (61-116)||(19954909-19954964)
chr1 (53-116)||(36880287-36880350)
chr1 (56-115)||(36880624-36880683)
chr1 (61-115)||(27240923-27240977)
chr1 (61-114)||(27926251-27926304)
chr1 (61-110)||(27928302-27928351)
chr1 (61-117)||(362475-362531)
chr1 (61-117)||(47940567-47940623)
chr1 (1-40)||(36880584-36880623)
chr1 (56-113)||(1387891-1387948)
chr1 (61-114)||(2125070-2125123)
chr1 (61-118)||(2854528-2854585)
chr1 (61-114)||(9978051-9978104)
chr1 (56-113)||(19796982-19797039)
chr1 (61-118)||(23698498-23698555)
chr1 (2-43)||(29598393-29598434)
chr1 (1-42)||(36007879-36007920)
chr1 (62-114)||(25297966-25298018)
chr1 (1-87)||(27670171-27670255)
chr1 (61-117)||(51789594-51789650)
chr1 (61-100)||(15324745-15324784)
chr1 (61-116)||(48954212-48954267)
chr1 (61-115)||(29598455-29598509)
chr1 (61-115)||(40647236-40647290)
chr1 (61-115)||(42561294-42561348)
chr1 (57-118)||(28447987-28448048)
chr1 (1-42)||(39015252-39015293)
chr1 (1-89)||(2302427-2302515)
chr1 (2-42)||(18651310-18651350)
chr1 (1-45)||(49284353-49284397)
chr1 (5-45)||(50856384-50856424)
chr1 (61-116)||(957707-957762)
chr1 (61-112)||(5189587-5189638)
chr1 (61-112)||(14387017-14387068)
chr1 (61-116)||(21930496-21930551)
chr1 (61-116)||(26208543-26208598)
chr1 (61-99)||(27670261-27670299)
chr1 (61-110)||(50856325-50856374)
chr1 (58-117)||(46691208-46691268)
[»] chr2 (50 HSPs)
chr2 (1-115)||(23835875-23835989)
chr2 (1-115)||(1924039-1924153)
chr2 (1-115)||(34490455-34490568)
chr2 (2-115)||(3116875-3116987)
chr2 (1-114)||(24101891-24102003)
chr2 (5-115)||(20892883-20892993)
chr2 (1-116)||(45408623-45408737)
chr2 (2-116)||(16705731-16705844)
chr2 (1-113)||(7737065-7737177)
chr2 (2-115)||(9281407-9281519)
chr2 (1-114)||(12850601-12850713)
chr2 (1-114)||(22269722-22269834)
chr2 (5-114)||(34455885-34455993)
chr2 (1-117)||(42713836-42713952)
chr2 (1-109)||(2818671-2818778)
chr2 (1-115)||(6605737-6605847)
chr2 (1-123)||(27920564-27920684)
chr2 (1-117)||(9933628-9933743)
chr2 (1-114)||(29229422-29229534)
chr2 (1-114)||(29342722-29342834)
chr2 (56-115)||(34490569-34490628)
chr2 (56-117)||(24101829-24101890)
chr2 (1-113)||(9850817-9850923)
chr2 (61-114)||(2818784-2818837)
chr2 (61-117)||(1923977-1924033)
chr2 (5-110)||(7116374-7116478)
chr2 (61-116)||(7737183-7737238)
chr2 (61-116)||(27920690-27920745)
chr2 (1-112)||(43475946-43476058)
chr2 (67-117)||(6605858-6605908)
chr2 (61-118)||(3116994-3117051)
chr2 (55-116)||(20892997-20893057)
chr2 (61-114)||(45408743-45408796)
chr2 (61-117)||(9933567-9933622)
chr2 (59-115)||(22269838-22269894)
chr2 (61-117)||(42713774-42713830)
chr2 (61-117)||(43858552-43858608)
chr2 (61-114)||(16705851-16705904)
chr2 (61-118)||(17500002-17500059)
chr2 (61-113)||(10552999-10553051)
chr2 (54-90)||(22346486-22346522)
chr2 (57-116)||(37340964-37341023)
chr2 (55-110)||(39243095-39243150)
chr2 (17-100)||(17434755-17434838)
chr2 (61-115)||(43476064-43476118)
chr2 (61-114)||(9281347-9281400)
chr2 (63-117)||(29229358-29229414)
chr2 (63-117)||(29342658-29342714)
chr2 (62-114)||(8111692-8111744)
chr2 (61-93)||(9850779-9850811)
[»] chr7 (56 HSPs)
chr7 (1-118)||(20184297-20184414)
chr7 (1-118)||(24836016-24836132)
chr7 (1-117)||(31231673-31231790)
chr7 (1-115)||(38883220-38883333)
chr7 (1-117)||(30594690-30594805)
chr7 (1-114)||(39617900-39618012)
chr7 (1-114)||(34052279-34052391)
chr7 (1-116)||(30259125-30259239)
chr7 (1-112)||(35339337-35339447)
chr7 (1-115)||(10936529-10936642)
chr7 (1-114)||(3953101-3953213)
chr7 (1-118)||(38528469-38528587)
chr7 (1-114)||(12142192-12142305)
chr7 (1-117)||(9285773-9285888)
chr7 (1-117)||(9289840-9289955)
chr7 (5-115)||(25742494-25742603)
chr7 (3-117)||(48103365-48103478)
chr7 (1-120)||(45997567-45997685)
chr7 (2-84)||(24123815-24123898)
chr7 (17-113)||(35665691-35665786)
chr7 (1-114)||(29277838-29277949)
chr7 (61-118)||(35339274-35339331)
chr7 (1-120)||(37093762-37093880)
chr7 (5-114)||(39143775-39143877)
chr7 (1-83)||(40358146-40358227)
chr7 (5-116)||(47237488-47237601)
chr7 (56-115)||(35665632-35665691)
chr7 (62-116)||(33721825-33721879)
chr7 (61-114)||(24836138-24836191)
chr7 (57-114)||(38883335-38883392)
chr7 (61-117)||(3953039-3953095)
chr7 (61-116)||(34052397-34052452)
chr7 (61-114)||(20184238-20184291)
chr7 (61-114)||(31231614-31231667)
chr7 (61-114)||(48103483-48103536)
chr7 (69-119)||(17101649-17101699)
chr7 (56-114)||(24123755-24123813)
chr7 (61-115)||(30259065-30259119)
chr7 (1-42)||(1402990-1403031)
chr7 (54-91)||(7955004-7955041)
chr7 (1-42)||(10398390-10398431)
chr7 (61-114)||(10936470-10936523)
chr7 (1-42)||(25572883-25572924)
chr7 (53-110)||(38528394-38528451)
chr7 (61-114)||(45997508-45997561)
chr7 (61-116)||(30594811-30594866)
chr7 (1-44)||(33749713-33749756)
chr7 (3-38)||(44148722-44148757)
chr7 (61-115)||(12142311-12142365)
chr7 (61-114)||(9285714-9285767)
chr7 (61-114)||(9289781-9289834)
chr7 (69-114)||(17101700-17101745)
chr7 (1-45)||(16876515-16876559)
chr7 (61-117)||(37093886-37093942)
chr7 (61-113)||(39143713-39143765)
chr7 (55-95)||(40596797-40596837)
[»] chr6 (32 HSPs)
chr6 (1-118)||(13439691-13439808)
chr6 (1-117)||(21380000-21380115)
chr6 (1-115)||(885384-885497)
chr6 (3-113)||(8091063-8091172)
chr6 (1-114)||(11687202-11687314)
chr6 (1-116)||(4890539-4890654)
chr6 (1-117)||(15546629-15546744)
chr6 (1-117)||(18998175-18998291)
chr6 (1-114)||(20501706-20501818)
chr6 (1-114)||(4238852-4238966)
chr6 (1-114)||(3368985-3369097)
chr6 (3-115)||(29609000-29609111)
chr6 (1-113)||(7808610-7808721)
chr6 (1-100)||(14393575-14393676)
chr6 (5-117)||(13172636-13172748)
chr6 (56-113)||(7808722-7808779)
chr6 (57-115)||(11687142-11687200)
chr6 (61-115)||(21379940-21379994)
chr6 (61-118)||(15546750-15546807)
chr6 (61-116)||(8091180-8091235)
chr6 (61-117)||(6433687-6433743)
chr6 (53-116)||(4179136-4179198)
chr6 (61-116)||(13172572-13172627)
chr6 (63-114)||(17367064-17367115)
chr6 (5-110)||(31764388-31764492)
chr6 (61-115)||(885503-885557)
chr6 (61-115)||(4890479-4890533)
chr6 (61-115)||(14393682-14393736)
chr6 (56-110)||(20501819-20501872)
chr6 (2-43)||(17367117-17367158)
chr6 (53-110)||(4076637-4076693)
chr6 (61-109)||(4238972-4239020)
[»] chr3 (76 HSPs)
chr3 (1-116)||(4072332-4072447)
chr3 (1-115)||(25446250-25446362)
chr3 (1-115)||(21969216-21969329)
chr3 (1-115)||(21991652-21991765)
chr3 (1-114)||(36822819-36822931)
chr3 (1-117)||(10441317-10441432)
chr3 (1-116)||(36657492-36657606)
chr3 (1-116)||(45487797-45487911)
chr3 (1-110)||(8831744-8831853)
chr3 (1-114)||(55340352-55340465)
chr3 (1-113)||(10254569-10254681)
chr3 (1-118)||(12838073-12838189)
chr3 (1-117)||(12789603-12789718)
chr3 (7-115)||(36329245-36329352)
chr3 (1-112)||(43639140-43639251)
chr3 (1-116)||(3970550-3970664)
chr3 (1-115)||(25488400-25488513)
chr3 (1-115)||(25561010-25561123)
chr3 (1-115)||(32237453-32237566)
chr3 (5-113)||(10117516-10117624)
chr3 (2-115)||(26906453-26906565)
chr3 (1-113)||(10017115-10017226)
chr3 (2-85)||(22101193-22101276)
chr3 (2-114)||(36278816-36278927)
chr3 (1-119)||(5529886-5530004)
chr3 (1-115)||(39850403-39850517)
chr3 (1-111)||(45712962-45713071)
chr3 (1-114)||(13078222-13078334)
chr3 (2-85)||(22176137-22176220)
chr3 (2-114)||(43150480-43150591)
chr3 (5-118)||(157031-157144)
chr3 (1-115)||(404043-404157)
chr3 (56-117)||(35368546-35368607)
chr3 (13-115)||(38125250-38125351)
chr3 (1-117)||(1476610-1476725)
chr3 (1-117)||(13724046-13724162)
chr3 (5-100)||(50099446-50099542)
chr3 (53-114)||(32362861-32362922)
chr3 (1-115)||(37506185-37506298)
chr3 (56-121)||(39850337-39850402)
chr3 (61-117)||(21969154-21969210)
chr3 (61-117)||(21991590-21991646)
chr3 (2-110)||(26976902-26977009)
chr3 (56-115)||(36822759-36822818)
chr3 (5-117)||(46664173-46664284)
chr3 (61-116)||(50099552-50099607)
chr3 (57-115)||(36657432-36657490)
chr3 (61-115)||(45487917-45487971)
chr3 (61-114)||(22101283-22101336)
chr3 (61-114)||(22176227-22176280)
chr3 (1-107)||(44611440-44611545)
chr3 (61-113)||(8831859-8831911)
chr3 (61-117)||(10117629-10117685)
chr3 (1-45)||(35368801-35368845)
chr3 (61-116)||(25446368-25446422)
chr3 (61-115)||(3970490-3970544)
chr3 (61-115)||(4072272-4072326)
chr3 (2-116)||(26977684-26977801)
chr3 (61-114)||(13078163-13078216)
chr3 (61-113)||(10254687-10254739)
chr3 (57-117)||(10441255-10441315)
chr3 (5-45)||(46679329-46679369)
chr3 (61-112)||(32237396-32237447)
chr3 (61-115)||(26906572-26906626)
chr3 (61-115)||(35368851-35368905)
chr3 (61-115)||(36278755-36278809)
chr3 (5-42)||(37536941-37536978)
chr3 (61-117)||(12838195-12838251)
chr3 (61-117)||(25561129-25561185)
chr3 (61-117)||(26976839-26976895)
chr3 (61-112)||(404163-404213)
chr3 (66-113)||(10017232-10017279)
chr3 (65-116)||(43639079-43639130)
chr3 (56-110)||(5530005-5530059)
chr3 (61-110)||(297541-297590)
chr3 (61-114)||(25488341-25488394)
[»] scaffold0122 (2 HSPs)
scaffold0122 (1-117)||(45831-45946)
scaffold0122 (61-114)||(45952-46005)
[»] chr8 (38 HSPs)
chr8 (1-118)||(15882196-15882313)
chr8 (5-116)||(29781022-29781132)
chr8 (1-115)||(8210322-8210435)
chr8 (1-114)||(23940863-23940976)
chr8 (2-117)||(12234463-12234578)
chr8 (1-115)||(17426687-17426802)
chr8 (1-115)||(38629473-38629586)
chr8 (5-113)||(33100708-33100815)
chr8 (1-113)||(37114239-37114350)
chr8 (1-117)||(38520015-38520130)
chr8 (1-83)||(40891044-40891125)
chr8 (5-114)||(24211341-24211449)
chr8 (61-118)||(15882319-15882376)
chr8 (61-117)||(24211275-24211331)
chr8 (61-116)||(17426626-17426681)
chr8 (56-114)||(33100645-33100703)
chr8 (2-117)||(38405135-38405250)
chr8 (5-115)||(11828659-11828775)
chr8 (61-117)||(35467288-35467344)
chr8 (61-112)||(40891131-40891182)
chr8 (2-85)||(10778686-10778768)
chr8 (61-115)||(24741822-24741876)
chr8 (1-100)||(24741882-24741980)
chr8 (61-115)||(38629592-38629646)
chr8 (2-43)||(4262036-4262077)
chr8 (17-115)||(4035740-4035837)
chr8 (54-118)||(35467167-35467231)
chr8 (61-100)||(4261990-4262029)
chr8 (61-116)||(38520136-38520191)
chr8 (61-110)||(14834676-14834725)
chr8 (2-43)||(25264287-25264328)
chr8 (53-113)||(5356234-5356294)
chr8 (61-116)||(12234585-12234640)
chr8 (61-116)||(23940802-23940857)
chr8 (2-32)||(38515585-38515615)
chr8 (61-110)||(29780963-29781012)
chr8 (10-42)||(29869941-29869973)
chr8 (55-110)||(36898266-36898322)
[»] scaffold0107 (2 HSPs)
scaffold0107 (2-117)||(51060-51174)
scaffold0107 (61-120)||(51181-51240)
[»] scaffold0188 (2 HSPs)
scaffold0188 (1-115)||(7085-7198)
scaffold0188 (61-115)||(7204-7258)
[»] scaffold0163 (2 HSPs)
scaffold0163 (1-114)||(1998-2111)
scaffold0163 (61-117)||(1936-1992)
[»] scaffold0653 (2 HSPs)
scaffold0653 (1-117)||(3452-3567)
scaffold0653 (61-114)||(3393-3446)
[»] scaffold0086 (2 HSPs)
scaffold0086 (1-116)||(48124-48238)
scaffold0086 (61-113)||(48244-48296)
[»] scaffold0595 (2 HSPs)
scaffold0595 (53-115)||(5700-5762)
scaffold0595 (61-116)||(5823-5880)
[»] scaffold0137 (1 HSPs)
scaffold0137 (1-117)||(10113-10227)
[»] scaffold0006 (1 HSPs)
scaffold0006 (17-118)||(72346-72445)
[»] scaffold0069 (1 HSPs)
scaffold0069 (55-116)||(26403-26464)
[»] scaffold0118 (2 HSPs)
scaffold0118 (15-116)||(14440-14540)
scaffold0118 (61-113)||(14560-14612)
[»] scaffold0013 (1 HSPs)
scaffold0013 (1-45)||(94240-94284)


Alignment Details
Target: chr4 (Bit Score: 167; Significance: 2e-89; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 5 - 237
Target Start/End: Complemental strand, 52824347 - 52824120
Alignment:
Q  5 atttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatcta 104  Q
    |||||||||||||||||||||||||||||||| |||||||        ||||||||||||||||||||||||||||||||||| ||| |||||||| |||    
T  52824347 atttcctcaaatccataattttctcaaagtttattatatc-taaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtaccta 52824249  T
Q  105 agttttctcctttagataactcaccccaactaggttgagtgagcttaaaaatgagatgaatactaacggattgattctagattcatcagaattaagctag 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||| ||||||||||||    
T  52824248 agttttctcctttagataactcaccccaactaggttgagtgagcttaaaaatgagatgaatactaac----tgattctagattcatcggaattaagctag 52824153  T
Q  205 gcagtctcgtccacaaagaaagtaacaactact 237  Q
    |||||||||||||||||||||||||||||||||    
T  52824152 gcagtctcgtccacaaagaaagtaacaactact 52824120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 20435199 - 20435314
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||       ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  20435199 catgatttcctcaaatccataattttctcgaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacctaaagaattgta 20435297  T
Q  101 tctaagttttctccttt 117  Q
     ||||||||||||||||    
T  20435298 cctaagttttctccttt 20435314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 530732 - 530840
Alignment:
Q  5 atttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatcta 104  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||| ||| |||||||| |||    
T  530732 atttcctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtaccta 530830  T
Q  105 agttttctcc 114  Q
    ||||||||||    
T  530831 agttttctcc 530840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 42274551 - 42274663
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||       ||| ||||||||||||||||||||||||||| ||| ||| ||||||||    
T  42274551 catgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatatatttttagttaagaaccatacgaaaaacacctaaggaattgta 42274650  T
Q  101 tctaagttttctc 113  Q
     ||||||||||||    
T  42274651 cctaagttttctc 42274663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 55107636 - 55107524
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||       ||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  55107636 catgatttcctcaaatgcataattttctcaaagtttgttatatccaaataa-tatgtatttttagttaagaaccatatgaaaagcacataaggaattgta 55107538  T
Q  101 tctaagttttctcc 114  Q
     |||||||||||||    
T  55107537 cctaagttttctcc 55107524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 18417769 - 18417658
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||       ||| ||||||||||||||||||||||||||||||| ||| ||||||||    
T  18417769 catgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatatatttttagttaagaaccatacgaaaagcacctaaggaattgta 18417671  T
Q  101 tctaagttttctc 113  Q
     ||||||||||||    
T  18417670 cctaagttttctc 18417658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 1299024 - 1298910
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||| |||||||| ||| ||||||||    
T  1299024 catgattttctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacaaaaagcacctaaggaattgta 1298926  T
Q  101 tctaagttttctcctt 116  Q
     |||||||||||||||    
T  1298925 cctaagttttctcctt 1298910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 4552897 - 4552781
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||       ||| ||||||||||||| ||||||| ||||||||| ||| ||||||||    
T  4552897 catgatttcctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatttatttttagttaaaaaccatatgaaaagcacttaaggaattgta 4552799  T
Q  101 tctaagttttctccttta 118  Q
     |||||||||||||||||    
T  4552798 cctaagttttctccttta 4552781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 13204489 - 13204376
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||       |||||||||||||||||||||||||| ||||| || |||  |||||||    
T  13204489 catgatttcctcaaatccataattttcacaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacaaaaagtacctaagtaattgta 13204391  T
Q  101 tctaagttttctcct 115  Q
    |||||||||||||||    
T  13204390 tctaagttttctcct 13204376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 24969600 - 24969715
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnnta--tgtatttttagttaagaaccatacgaaaagcacataaagaattg 98  Q
    |||||||||||||||| ||||||||||||||||||||||||||||        |  ||||||||||||||||||| ||||||||||||| ||| ||||||    
T  24969600 catgatttcctcaaattcataattttctcaaagtttgttatatccaaaaaaaaaaatgtatttttagttaagaactatacgaaaagcacctaaggaattg 24969699  T
Q  99 tatctaagttttctcc 114  Q
    || |||||||||||||    
T  24969700 tacctaagttttctcc 24969715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 4688308 - 4688418
Alignment:
Q  3 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatc 102  Q
    |||||||||||||| || |||||||||||||||||||||||||       |||||||||||| |||||||||||||||||| ||  ||| |||||||| |    
T  4688308 tgatttcctcaaattcacaattttctcaaagtttgttatatccaaaaaaatatgtatttttaattaagaaccatacgaaaatcatctaaggaattgtacc 4688407  T
Q  103 taagttttctc 113  Q
    |||||||||||    
T  4688408 taagttttctc 4688418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 27434718 - 27434609
Alignment:
Q  5 atttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatcta 104  Q
    |||||||||||| ||||||||||||||||||||||||||||        |||||||||||||||||||| |||| ||||||||||||  ||||||| |||    
T  27434718 atttcctcaaattcataattttctcaaagtttgttatatccaaaaaaa-atgtatttttagttaagaactatacaaaaagcacataagaaattgtaccta 27434620  T
Q  105 agttttctcct 115  Q
    |||||||||||    
T  27434619 agttttctcct 27434609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 32318779 - 32318896
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||       ||| |||||||| ||||||| |||| ||||||||| ||||||||||||    
T  32318779 catgatttcctcagatccataattttctcaaagtttgttatatcc-aaaaaatatatatttttaattaagaatcatatgaaaagcacctaaagaattgta 32318877  T
Q  101 tctaagttttctcctttag 119  Q
      ||| |||||||||||||    
T  32318878 cttaaattttctcctttag 32318896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 35360788 - 35360674
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |       |||||||||||||||||||||||||||||||  || |||  |||||||    
T  35360788 catgatttccttaaatccataattttctcaaagtttgttatat-ctaaaaaatatgtatttttagttaagaaccatacgaaaaatacctaataaattgta 35360690  T
Q  101 tctaagttttctccttt 117  Q
     ||||||||||||||||    
T  35360689 -ctaagttttctccttt 35360674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 23928626 - 23928738
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||        || |||||||||||||||| |||||| ||||||| ||| ||||||||    
T  23928626 catgatttcctcaaatccataattttctcaaaatttgttatatccaaaaaaa-atatatttttagttaagaatcatacgcaaagcacctaaggaattgta 23928724  T
Q  101 tctaagttttctcc 114  Q
      ||||||||||||    
T  23928725 cataagttttctcc 23928738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 28809906 - 28810019
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||       ||||||||| |||||||||||||||| |||||||  |||  |||||||    
T  28809906 catgattttctcaaatccataattttctcaaaatttgttatatcc-aaaaaatatgtatttctagttaagaaccataccaaaagcagctaagaaattgta 28810004  T
Q  101 tctaagttttctcct 115  Q
     ||||||||||||||    
T  28810005 cctaagttttctcct 28810019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 4895084 - 4894967
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaa---agcacataaagaatt 97  Q
    |||||||||||||||| |||||||||||||||||||||||||| |       ||||||||||||||||||||| |||| |||   || |||||| |||||    
T  4895084 catgatttcctcaaattcataattttctcaaagtttgttatattc-aaaaaatatgtatttttagttaagaactatacaaaaaacagtacataaggaatt 4894986  T
Q  98 gtatctaagttttctcctt 116  Q
    ||| |||||||||||||||    
T  4894985 gtacctaagttttctcctt 4894967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 21048764 - 21048845
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaag 84  Q
    ||||||||||||||||||||||||||||| ||||||||||||||        ||||||||||||||||||||||||||||||||    
T  21048764 catgatttcctcaaatccataattttctcgaagtttgttatatc--aaaaaatatgtatttttagttaagaaccatacgaaaag 21048845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 24915853 - 24915971
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatcc----nnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaat 96  Q
    |||||||| ||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||| | ||||| ||||||  |||    
T  24915853 catgattttctcaaatccataattttctcaaagtttgttatatccaaaaaaaataatatgtatttttagttaagaaccat-caaaaagtacataagaaat 24915951  T
Q  97 tgtatctaagttttctcctt 116  Q
    |||| |||||||||||||||    
T  24915952 tgtacctaagttttctcctt 24915971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 61 - 118
Target Start/End: Complemental strand, 24969594 - 24969537
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttta 118  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||    
T  24969594 tttagttaagaaccatacgaaaagcacctaaagaattgtacctaagttttctgcttta 24969537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 266
Target Start/End: Complemental strand, 52824097 - 52824052
Alignment:
Q  221 agaaagtaacaactactaagagttcataaaaactgattgatggtat 266  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  52824097 agaaagtaacaactactaagagttcataaaaactgattgatggtat 52824052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 56552173 - 56552064
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||         ||||||||||||| |||||||||| |||||||| ||| ||| ||||    
T  56552173 catgatttcctcaaatccataattttctcaaagtttgttataaccaaggaaa-gtgtatttttagttgagaaccatacaaaaagcacctaaggaaatgta 56552075  T
Q  101 tctaagttttc 111  Q
     || |||||||    
T  56552074 cctgagttttc 56552064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 115
Target Start/End: Original strand, 3422489 - 3422601
Alignment:
Q  2 atgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtat 101  Q
    ||||||| ||||||||||||||||||||||||||| || ||||         || ||||||||||||| ||||||||||||| ||| ||||||||||||     
T  3422489 atgattttctcaaatccataattttctcaaagtttattgtatcgtaaaaag-atatatttttagttaaaaaccatacgaaaaacacctaaagaattgtac 3422587  T
Q  102 ctaagttttctcct 115  Q
    ||||||||| ||||    
T  3422588 ctaagttttgtcct 3422601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 32318773 - 32318721
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 113  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  32318773 tttagttaagaaccatacgaaaagcacataaggaattgtacctaagttttctc 32318721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 24915847 - 24915792
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 116  Q
    ||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  24915847 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcctt 24915792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 16995665 - 16995726
Alignment:
Q  54 atgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 115  Q
    ||||||| |||||||| ||||||||||||| ||| |||||||||||||||||||||| ||||    
T  16995665 atgtattgttagttaaaaaccatacgaaaatcacttaaagaattgtatctaagttttgtcct 16995726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 59 - 112
Target Start/End: Original strand, 37525059 - 37525112
Alignment:
Q  59 tttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttct 112  Q
    ||||||||||||||||| ||||||||||| |||||||||||| |||||||||||    
T  37525059 tttttagttaagaaccacacgaaaagcacctaaagaattgtacctaagttttct 37525112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 2272478 - 2272371
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||||| |||||||||||||| |||||||||||| |||||       | |||| ||||||||||||||||||  |||||||| |||| |||||||    
T  2272478 catgatttccttaaatccataattttatcaaagtttgttctatccaaaaaaat-tgta-ttttagttaagaaccatataaaaagcacctaaaaaattgta 2272381  T
Q  101 tctaagtttt 110  Q
     |||||||||    
T  2272380 actaagtttt 2272371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 13204495 - 13204551
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 117  Q
    ||||||||| |||||||||||||| |||||| |||||||| ||||||||||||||||    
T  13204495 tttagttaaaaaccatacgaaaagtacataaggaattgtacctaagttttctccttt 13204551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 42274545 - 42274489
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 117  Q
    ||||||||||||||||||||||||||  ||| |||||||| ||||||||||||||||    
T  42274545 tttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctccttt 42274489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 530722 - 530667
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 116  Q
    |||||||||||||||||| |||||||| ||| |||||||| |||||||||||||||    
T  530722 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctcctt 530667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 21048758 - 21048703
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 116  Q
    ||||||||||||||||||||||||||  ||| |||||||| |||||||||||||||    
T  21048758 tttagttaagaaccatacgaaaagcatctaacgaattgtacctaagttttctcctt 21048703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 1299030 - 1299084
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 115  Q
    ||||||||||||||||| ||||||||| ||| |||||||| ||||||||||||||    
T  1299030 tttagttaagaaccataagaaaagcacctaaggaattgtacctaagttttctcct 1299084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 118
Target Start/End: Original strand, 4552903 - 4552960
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttta 118  Q
    ||||||||||||||||||  |||||| |||| |||||||| |||||||||||||||||    
T  4552903 tttagttaagaaccatacagaaagcatataaggaattgtacctaagttttctccttta 4552960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 20435193 - 20435140
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 114  Q
    ||||||||||||||||||||||||||  ||| ||||||||| ||||||||||||    
T  20435193 tttagttaagaaccatacgaaaagcatctaaggaattgtatataagttttctcc 20435140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 24294575 - 24294494
Alignment:
Q  5 atttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcac 87  Q
    |||||||||||| | |||||||||||||||||||||||| |       |||||||||||| ||||||| ||||||||||||||    
T  24294575 atttcctcaaattcgtaattttctcaaagtttgttatat-caaaaaaatatgtatttttaattaagaatcatacgaaaagcac 24294494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 27434728 - 27434781
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 114  Q
    ||||||||||||||||||||||||||| ||| ||||||||  ||||||||||||    
T  27434728 tttagttaagaaccatacgaaaagcacctaaggaattgtacttaagttttctcc 27434781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 4688300 - 4688248
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 113  Q
    ||||||||||||||||||||||||||| |||  ||||||| ||||||||||||    
T  4688300 tttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctc 4688248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 43486253 - 43486197
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 117  Q
    ||||||||||||||||| |||||| || ||| |||||||| ||||||||||||||||    
T  43486253 tttagttaagaaccataggaaaagtacctaaggaattgtacctaagttttctccttt 43486197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 55107642 - 55107698
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 117  Q
    |||||| ||||||||||| |||||||| ||| |||||||| ||||||||||||||||    
T  55107642 tttagtaaagaaccatacaaaaagcacctaaggaattgtacctaagttttctccttt 55107698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 116
Target Start/End: Original strand, 47465098 - 47465157
Alignment:
Q  57 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 116  Q
    ||||||||||||| || |||| ||||||||| |||||||||||| ||||||||| |||||    
T  47465098 tatttttagttaaaaatcatatgaaaagcacctaaagaattgtacctaagttttgtcctt 47465157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 52587382 - 52587417
Alignment:
Q  9 cctcaaatccataattttctcaaagtttgttatatc 44  Q
    ||||||||||||||||||||||||||||||||||||    
T  52587382 cctcaaatccataattttctcaaagtttgttatatc 52587417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 55049460 - 55049503
Alignment:
Q  2 atgatttcctcaaatccataattttctcaaagtttgttatatcc 45  Q
    |||||||||||||| |||||||||| ||||||||||||||||||    
T  55049460 atgatttcctcaaacccataattttttcaaagtttgttatatcc 55049503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 18417775 - 18417829
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 115  Q
    |||| ||||||||||||| |||||||| ||| |||||||| ||||||||||||||    
T  18417775 tttaattaagaaccatacaaaaagcacctaaggaattgtacctaagttttctcct 18417829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 36030997 - 36031031
Alignment:
Q  9 cctcaaatccataattttctcaaagtttgttatat 43  Q
    |||||||||||||||||||||||||||||||||||    
T  36030997 cctcaaatccataattttctcaaagtttgttatat 36031031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 11330164 - 11330103
Alignment:
Q  56 gtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 117  Q
    ||||||| ||||||||| |||| ||||||||  |||  ||||||||||||||||||||||||    
T  11330164 gtattttcagttaagaatcatatgaaaagcatctaagaaattgtatctaagttttctccttt 11330103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 118
Target Start/End: Complemental strand, 23928620 - 23928564
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttta 118  Q
    |||||||||||| |||||||||| ||| ||| |||||||| |||||||||||||||||    
T  23928620 tttagttaagaatcatacgaaaaacac-taaggaattgtacctaagttttctccttta 23928564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 55049453 - 55049400
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 114  Q
    ||||||||||||| ||||||||||||| ||| ||||||||  ||||||||||||    
T  55049453 tttagttaagaactatacgaaaagcacctaaggaattgtacataagttttctcc 55049400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 36030992 - 36030936
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 117  Q
    |||||||||||| |||||||||||||| ||| |||||||| |||| |||||| ||||    
T  36030992 tttagttaagaaacatacgaaaagcacgtaaggaattgtacctaacttttcttcttt 36030936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 100
Target Start/End: Original strand, 2272484 - 2272523
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||| ||||||||||||||||||||||||| ||||||||    
T  2272484 tttagctaagaaccatacgaaaagcacataatgaattgta 2272523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 28574006 - 28573947
Alignment:
Q  55 tgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 114  Q
    |||||||| || |||||||||| |||||||||| |||  ||||||| |||||||||||||    
T  28574006 tgtattttaaggtaagaaccatgcgaaaagcacctaagtaattgtacctaagttttctcc 28573947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 3422482 - 3422428
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 115  Q
    |||| |||||||| ||||||||||||| |||  ||||||| ||||||||||||||    
T  3422482 tttaattaagaactatacgaaaagcacctaagaaattgtacctaagttttctcct 3422428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 35360794 - 35360847
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 115  Q
    ||||||||||||||||||||||| ||  |||| ||||||| ||||||||||||||    
T  35360794 tttagttaagaaccatacgaaaaacaactaaaaaattgta-ctaagttttctcct 35360847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 110
Target Start/End: Original strand, 42020203 - 42020257
Alignment:
Q  56 gtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagtttt 110  Q
    ||||||||||||||||||||||| ||||| |  || ||||||||| |||||||||    
T  42020203 gtatttttagttaagaaccatacaaaaagtatctagagaattgtacctaagtttt 42020257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 9355612 - 9355652
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttat 41  Q
    ||||||||||| |||||||||||||||||| | ||||||||    
T  9355612 catgatttccttaaatccataattttctcagaatttgttat 9355652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 6e-37; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 24397304 - 24397415
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  24397304 catgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgta 24397403  T
Q  101 tctaagttttct 112  Q
     |||||||||||    
T  24397404 cctaagttttct 24397415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 35420671 - 35420787
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||  ||| ||||||||    
T  35420671 catgatttcctcaaatccataattttctcaaagtttgttatatc-aaaaaaatatgtatttttagttaagaaccatacgaaaagcatctaaggaattgta 35420769  T
Q  101 tctaagttttctccttta 118  Q
     |||||||||||||||||    
T  35420770 cctaagttttctccttta 35420787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 1138670 - 1138558
Alignment:
Q  2 atgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtat 101  Q
    ||||||| ||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||  |||||||||||     
T  1138670 atgattttctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcaccaaaagaattgtac 1138572  T
Q  102 ctaagttttctcct 115  Q
    ||||||||||||||    
T  1138571 ctaagttttctcct 1138558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 15855955 - 15855840
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||  ||| ||||||||    
T  15855955 catgatttcctcaaatccataattttctcaaagtttgttatatc-aaaaaaatatgtatttttagttaagaaccatacgaaaagcatctaaggaattgta 15855857  T
Q  101 tctaagttttctccttt 117  Q
     ||||||||||||||||    
T  15855856 cctaagttttctccttt 15855840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 20476543 - 20476429
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||        ||||||||||||||||||||||||||||||||||  || |||||||||    
T  20476543 catgatttcctcaaatccataattttctcaaaatttgttatatc-acaaaaatatgtatttttagttaagaaccatacgaaaagcatctagagaattgta 20476445  T
Q  101 tctaagttttctcctt 116  Q
     |||||||||||||||    
T  20476444 cctaagttttctcctt 20476429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 16473067 - 16472954
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| |       ||||||||||||||||||||||||||||||||||  ||| ||||||||    
T  16473067 catgatttcctcaaatccataattttctcaaagtttgttatat-caaaaaaatatgtatttttagttaagaaccatacgaaaagcatctaaggaattgta 16472969  T
Q  101 tctaagttttctcct 115  Q
     ||||||||| ||||    
T  16472968 cctaagttttttcct 16472954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 19976374 - 19976260
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||||||||||||||||||||||| | ||||||       || |||||||||||||||||||||||||||| |||||||| |||| ||    
T  19976374 catgatttcctcaaatccataattttctcaaagtttatcatatccaaaaaaatacgtatttttagttaagaaccatacgaaaatcacataaaaaattata 19976275  T
Q  101 tctaagttttctcct 115  Q
      |||||||||||||    
T  19976274 gttaagttttctcct 19976260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 21259789 - 21259902
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||  ||||||||||||||||||||||||||||       ||||||||||||||||||||||||| |||||| || ||| ||||||||    
T  21259789 catgatttcctcaaaatcataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccataagaaaagtacctaaggaattgta 21259887  T
Q  101 tctaagttttctcct 115  Q
     |||| |||||||||    
T  21259888 cctaaattttctcct 21259902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 21262055 - 21261970
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcac 87  Q
    ||||||||||||||||||| |||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||    
T  21262055 catgatttcctcaaatccacaattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaagaaccatacgaaaagcac 21261970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 4266092 - 4265980
Alignment:
Q  3 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatc 102  Q
    ||||||| |||||||||||||||||| ||||||||||| ||||       ||||||||||||||||||||||||||||||| ||| |||  ||||||| |    
T  4266092 tgatttcttcaaatccataattttcttaaagtttgttacatccaaaaaa-tatgtatttttagttaagaaccatacgaaaaacacctaagaaattgtacc 4265994  T
Q  103 taagttttctcctt 116  Q
    ||||||||||||||    
T  4265993 taagttttctcctt 4265980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 12744938 - 12744829
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||       ||||||||||||||||| |||||||| |||| ||| |||| |||||||    
T  12744938 catgatttcctcaaattcataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaaaaaccatacaaaaaacacctaaa-aattgta 12744841  T
Q  101 tctaagttttctc 113  Q
    | |||||||||||    
T  12744840 t-taagttttctc 12744829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 33629405 - 33629520
Alignment:
Q  2 atgatttcctcaaatccataattttctcaaagtttgttatatcc-nnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||        ||| |||||||||||||||| |||||||||| ||  ||| ||||||||    
T  33629405 atgattttctcaaatccataattttctcaaagtttgttatatccaaaaaatatatatatttttagttaagaatcatacgaaaaacatctaaggaattgta 33629504  T
Q  101 tctaagttttctcctt 116  Q
     |||| ||||||||||    
T  33629505 cctaaattttctcctt 33629520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 12808023 - 12807911
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||||| |||||||||||||| |||||||||||||||| |       ||||||||||||||||| ||||||||||||| ||| |||  |||||||    
T  12808023 catgatttccttaaatccataattttttcaaagtttgttatat-ctaaaaaatatgtatttttagttaaaaaccatacgaaaaacacctaagaaattgta 12807925  T
Q  101 tctaagttttctcct 115  Q
    | |||||||||||||    
T  12807924 t-taagttttctcct 12807911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 13754354 - 13754462
Alignment:
Q  5 atttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatcta 104  Q
    |||||||||||| |||||||||||||||||||| ||||||        ||||||||||||||||||||||||||||||| ||| |||  |||||||  ||    
T  13754354 atttcctcaaattcataattttctcaaagtttgctatatc-aaaaaaatatgtatttttagttaagaaccatacgaaaaacacctaagtaattgtacata 13754452  T
Q  105 agttttctcc 114  Q
    | ||||||||    
T  13754453 aattttctcc 13754462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 33629398 - 33629342
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 117  Q
    |||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||    
T  33629398 tttagttaagaaccataccaaaagcacataaggaattgtacctaagttttctccttt 33629342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 35420669 - 35420609
Alignment:
Q  57 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 117  Q
    ||||||||||||||||||||||||||||||  ||| |||||||| ||||||||||||||||    
T  35420669 tatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctccttt 35420609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 43539217 - 43539105
Alignment:
Q  3 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatc 102  Q
    |||||| || |||||||||||||||||||||||||||||||||       ||||||||| ||||| |||||||||||||||  || |||  ||||||| |    
T  43539217 tgattttcttaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttatagttcagaaccatacgaaaaatacctaagaaattgta-c 43539120  T
Q  103 taagttttctccttt 117  Q
    |||||||||||||||    
T  43539119 taagttttctccttt 43539105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 57 - 120
Target Start/End: Original strand, 16473069 - 16473132
Alignment:
Q  57 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctttaga 120  Q
    ||||||||||||||||||||||||||||||  ||| |||||||| ||||||||||||| |||||    
T  16473069 tatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctccattaga 16473132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 20476549 - 20476604
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 116  Q
    ||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  20476549 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcctt 20476604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 59 - 112
Target Start/End: Original strand, 2255578 - 2255631
Alignment:
Q  59 tttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttct 112  Q
    ||||||||||||||||| ||||||||||| |||||||||||| |||||||||||    
T  2255578 tttttagttaagaaccacacgaaaagcacctaaagaattgtacctaagttttct 2255631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 57 - 114
Target Start/End: Original strand, 15855957 - 15856014
Alignment:
Q  57 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 114  Q
    ||||||||||||||||||||||||||||||  ||| |||||||| |||||||||||||    
T  15855957 tatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcc 15856014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 67 - 116
Target Start/End: Complemental strand, 21259777 - 21259728
Alignment:
Q  67 taagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 116  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  21259777 taagaaccatacgaaaagcacataaagaattgtacgtaagttttctcctt 21259728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 37655211 - 37655316
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||| |||||||||| ||||||||||||||||||||||||| |        |||||||||||||||||||||||||| ||||||      |||||||||    
T  37655211 catgacttcctcaaattcataattttctcaaagtttgttataac--aaaaaatatgtatttttagttaagaaccatacaaaaagc------agaattgta 37655302  T
Q  101 tctaagttttctcc 114  Q
     |||||||||||||    
T  37655303 cctaagttttctcc 37655316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 114
Target Start/End: Original strand, 1164866 - 1164967
Alignment:
Q  13 aaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttct 112  Q
    |||||||||||||| | ||||||| ||||||||       ||| |||||||| |||||||||||||||||||||  ||| |||||||| |||| ||||||    
T  1164866 aaatccataattttttaaaagtttattatatccaaaaaaatatttatttttaattaagaaccatacgaaaagcagctaaggaattgtacctaaattttct 1164965  T
Q  113 cc 114  Q
    ||    
T  1164966 cc 1164967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 1456085 - 1456158
Alignment:
Q  5 atttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacg 79  Q
    |||| ||||||||||||||||||||||||||||||||||||       |||||||||||||| ||||||||||||    
T  1456085 attttctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagtcaagaaccatacg 1456158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 13754344 - 13754289
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 116  Q
    |||||||||||| |||||||||| ||||||| |||||||| |||||||||||||||    
T  13754344 tttagttaagaatcatacgaaaaacacataaggaattgtacctaagttttctcctt 13754289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 10132372 - 10132426
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 115  Q
    |||||||||||||||||| |||| ||||||| |||||||||||||||||| ||||    
T  10132372 tttagttaagaaccatacaaaaaacacataaggaattgtatctaagttttttcct 10132426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 35806995 - 35806949
Alignment:
Q  54 atgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||    
T  35806995 atgtatttttagttaagaaccatatgaaaagcacctaaagaattgta 35806949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 110
Target Start/End: Original strand, 8364744 - 8364797
Alignment:
Q  57 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagtttt 110  Q
    |||||||||||||||||||||| |||||||| ||| |||||||| |||||||||    
T  8364744 tatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagtttt 8364797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 35276351 - 35276465
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||  |||||||||||||||||| ||||||| |||||||        | ||||||||||| ||||||| |||| |||||||  |||  |||||||    
T  35276351 catgattttatcaaatccataattttcttaaagtttattatatctaaaaaaatgtgtatttttaggtaagaactatacaaaaagcatctaataaattgta 35276450  T
Q  101 tctaagttttctcct 115  Q
    |||||||||| ||||    
T  35276451 tctaagttttgtcct 35276465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 37552367 - 37552473
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||| |||||||||| |||||||||||||||||||||||||  |       |||||||||||||| ||||||||||| ||||||      |||||||||    
T  37552367 catgacttcctcaaattcataattttctcaaagtttgttata-acaaaaaaatatgtatttttagtcaagaaccatacaaaaagc------agaattgta 37552459  T
Q  101 tctaagttttctcc 114  Q
     |||||||||||||    
T  37552460 cctaagttttctcc 37552473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 1138677 - 1138732
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 116  Q
    ||||||||||||||||||||||||||  ||  |||||||| |||||||||||||||    
T  1138677 tttagttaagaaccatacgaaaagcagctatggaattgtacctaagttttctcctt 1138732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 4266100 - 4266155
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 116  Q
    ||||||||||||||||||||||| ||| ||| |||||||| | |||||||||||||    
T  4266100 tttagttaagaaccatacgaaaaacacctaaggaattgtaccgaagttttctcctt 4266155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 116
Target Start/End: Complemental strand, 10132339 - 10132280
Alignment:
Q  57 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 116  Q
    |||||||| ||||||||||||| |||| || ||||| ||||||||||||||||| |||||    
T  10132339 tatttttaattaagaaccatacaaaaaacatataaaaaattgtatctaagttttatcctt 10132280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 29141853 - 29141802
Alignment:
Q  66 ttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 117  Q
    |||||||||||||||||| ||| |||  ||||||||||||||||||||||||    
T  29141853 ttaagaaccatacgaaaaacacctaagcaattgtatctaagttttctccttt 29141802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 780853 - 780895
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatat 43  Q
    ||||||||||| |||||||||||||||| ||||||||||||||    
T  780853 catgatttccttaaatccataattttcttaaagtttgttatat 780895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 21591266 - 21591213
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 114  Q
    ||||||| | ||||||||||||||||| ||| |||||||| |||||||||||||    
T  21591266 tttagttcacaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 21591213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 21595383 - 21595330
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 114  Q
    ||||||| | ||||||||||||||||| ||| |||||||| |||||||||||||    
T  21595383 tttagttcacaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 21595330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 25751570 - 25751619
Alignment:
Q  62 ttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttc 111  Q
    |||||||||||||| ||||||||||| |||| ||||||| ||||||||||    
T  25751570 ttagttaagaaccacacgaaaagcacctaaaaaattgtacctaagttttc 25751619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 110
Target Start/End: Complemental strand, 32623268 - 32623219
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagtttt 110  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||||    
T  32623268 tttagttaagaaccatacgaaaaacacctaaggaattgtacctaagtttt 32623219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 37552361 - 37552305
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 117  Q
    |||||||||||||| ||| ||||||||  || |||||||| ||||||||||||||||    
T  37552361 tttagttaagaaccgtacaaaaagcacggaatgaattgtacctaagttttctccttt 37552305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 42522931 - 42522987
Alignment:
Q  54 atgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagtttt 110  Q
    |||||||||||||||||||||| || |||| ||| |||| |||| ||||||||||||    
T  42522931 atgtatttttagttaagaaccaaacaaaaaacacctaaaaaattatatctaagtttt 42522987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 735385 - 735346
Alignment:
Q  4 gatttcctcaaatccataattttctcaaagtttgttatat 43  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  735385 gatttcatcaaattcataattttctcaaagtttgttatat 735346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 71 - 118
Target Start/End: Original strand, 17583367 - 17583414
Alignment:
Q  71 aaccatacgaaaagcacataaagaattgtatctaagttttctccttta 118  Q
    ||||||||||||||||| |||  ||||||| |||||||||||||||||    
T  17583367 aaccatacgaaaagcacctaagaaattgtacctaagttttctccttta 17583414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 44
Target Start/End: Original strand, 32623286 - 32623317
Alignment:
Q  13 aaatccataattttctcaaagtttgttatatc 44  Q
    ||||||||||||||||||||||||||||||||    
T  32623286 aaatccataattttctcaaagtttgttatatc 32623317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 43539225 - 43539280
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 116  Q
    |||||||||| |||||||||||| ||| ||| |||||||| |||| ||||||||||    
T  43539225 tttagttaaggaccatacgaaaaacacctaaggaattgtacctaaattttctcctt 43539280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 34513477 - 34513515
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgtt 39  Q
    ||||||||| ||||| |||||||||||||||||||||||    
T  34513477 catgatttcttcaaacccataattttctcaaagtttgtt 34513515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 115
Target Start/End: Original strand, 780915 - 780964
Alignment:
Q  66 ttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 115  Q
    |||||||||||||||||||||| |||  ||||||| ||||||||| ||||    
T  780915 ttaagaaccatacgaaaagcacctaagaaattgtacctaagttttttcct 780964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 35
Target Start/End: Original strand, 1384388 - 1384421
Alignment:
Q  2 atgatttcctcaaatccataattttctcaaagtt 35  Q
    |||||||||||||||| |||||||||||||||||    
T  1384388 atgatttcctcaaatctataattttctcaaagtt 1384421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 2538507 - 2538467
Alignment:
Q  2 atgatttcctcaaatccataattttctcaaagtttgttata 42  Q
    |||||||  |||||||||||||||||||| |||||||||||    
T  2538507 atgattttttcaaatccataattttctcagagtttgttata 2538467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 42
Target Start/End: Original strand, 12257582 - 12257614
Alignment:
Q  10 ctcaaatccataattttctcaaagtttgttata 42  Q
    ||||||||||||||||| |||||||||||||||    
T  12257582 ctcaaatccataattttttcaaagtttgttata 12257614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 21591272 - 21591300
Alignment:
Q  1 catgatttcctcaaatccataattttctc 29  Q
    |||||||||||||||||||||||||||||    
T  21591272 catgatttcctcaaatccataattttctc 21591300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 21595389 - 21595417
Alignment:
Q  1 catgatttcctcaaatccataattttctc 29  Q
    |||||||||||||||||||||||||||||    
T  21595389 catgatttcctcaaatccataattttctc 21595417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 117
Target Start/End: Original strand, 26152718 - 26152782
Alignment:
Q  53 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 117  Q
    |||||||||||||||||||  ||| |||||||||  |||| | ||||| |||| |||||||||||    
T  26152718 tatgtatttttagttaagagtcattcgaaaagcagttaaaaatttgtagctaaattttctccttt 26152782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 6e-37; HSPs: 72)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 9978111 - 9978222
Alignment:
Q  2 atgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtat 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||| ||| ||||||||     
T  9978111 atgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtac 9978210  T
Q  102 ctaagttttctc 113  Q
    ||||||||||||    
T  9978211 ctaagttttctc 9978222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 15324738 - 15324623
Alignment:
Q  2 atgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtat 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||| |||  |||||||     
T  15324738 atgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaagaaattgtac 15324639  T
Q  102 ctaagttttctccttt 117  Q
    ||||||||||||||||    
T  15324638 ctaagttttctccttt 15324623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 47940629 - 47940745
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||| ||| ||||||||    
T  47940629 catgatttcctcgaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatacgaaaaacacctaaggaattgta 47940728  T
Q  101 tctaagttttctccttt 117  Q
     ||||||||||||||||    
T  47940729 cctaagttttctccttt 47940745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 3607788 - 3607902
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||| |||  |||||||    
T  3607788 catgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacctaagaaattgta 3607886  T
Q  101 tctaagttttctcctt 116  Q
     |||||||||||||||    
T  3607887 cctaagttttctcctt 3607902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 5189581 - 5189467
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  5189581 catgatttccttaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgta 5189483  T
Q  101 tctaagttttctcctt 116  Q
     |||||||||||||||    
T  5189482 cctaagttttctcctt 5189467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 19797040 - 19797153
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||       ||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  19797040 catgatttcctcaaatccataattttttcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgta 19797138  T
Q  101 tctaagttttctcct 115  Q
     ||||||||||||||    
T  19797139 cctaagttttctcct 19797153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 50627243 - 50627130
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||  ||| ||||||||    
T  50627243 catgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcatctaaggaattgta 50627145  T
Q  101 tctaagttttctcct 115  Q
     ||||||||||||||    
T  50627144 cctaagttttctcct 50627130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 19954970 - 19955084
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||| ||||| || ||| ||||||||    
T  19954970 catgatttcctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaagaaccatacaaaaagtacctaaggaattgta 19955068  T
Q  101 tctaagttttctcctt 116  Q
     |||||||||||||||    
T  19955069 cctaagttttctcctt 19955084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 14387074 - 14387185
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||||||||||||||||||||||| ||||||||       ||||||||||||||||||||||||||||||| ||| ||| ||||||||    
T  14387074 catgatttcctcaaatccataattttctcaaagtttattatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaaacacctaaggaattgta 14387172  T
Q  101 tctaagttttctc 113  Q
     ||||||||||||    
T  14387173 cctaagttttctc 14387185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 42561354 - 42561469
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||| |||||||| ||| ||||||||    
T  42561354 catgatttcttcatatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacaaaaagcacctaaggaattgta 42561452  T
Q  101 tctaagttttctccttt 117  Q
     ||||||||||||||||    
T  42561453 cctaagttttctccttt 42561469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 27240983 - 27241097
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||       ||| ||||||||||||||||||||||| ||||||| ||| ||||||||    
T  27240983 catgattttctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatatatttttagttaagaaccatacgcaaagcacctaacgaattgta 27241081  T
Q  101 tctaagttttctcctt 116  Q
     |||||||||||||||    
T  27241082 cctaagttttctcctt 27241097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 4299455 - 4299567
Alignment:
Q  5 atttcctcaaatccataattttctcaaagtttgttatatccnnnnnnn--tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatc 102  Q
    |||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||| ||| ||| |||||||| |    
T  4299455 atttcctcaaatccataattttctcaaagtttgttatatccaaaaaaaaatatgtatttttagttaagaaccatacgaaaaacacctaaggaattgtacc 4299554  T
Q  103 taagttttctcct 115  Q
    |||||||||||||    
T  4299555 taagttttctcct 4299567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 2 - 115
Target Start/End: Original strand, 2854592 - 2854704
Alignment:
Q  2 atgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtat 101  Q
    ||||||||||||||| ||||||||||||||||||||||||||||       ||| |||||||||||||||||||||||||||| || ||| ||||||||     
T  2854592 atgatttcctcaaattcataattttctcaaagtttgttatatccaaaaaa-tatatatttttagttaagaaccatacgaaaaggacctaaggaattgtac 2854690  T
Q  102 ctaagttttctcct 115  Q
    ||||||||||||||    
T  2854691 ctaagttttctcct 2854704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 2 - 115
Target Start/End: Original strand, 48954274 - 48954386
Alignment:
Q  2 atgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtat 101  Q
    ||||||||||||||| ||||||||||||||||||||||||||||       ||| |||||||||||||||||||||||||||| || ||| ||||||||     
T  48954274 atgatttcctcaaattcataattttctcaaagtttgttatatccaaaaaa-tatatatttttagttaagaaccatacgaaaaggacctaaggaattgtac 48954372  T
Q  102 ctaagttttctcct 115  Q
    ||||||||||||||    
T  48954373 ctaagttttctcct 48954386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 23698562 - 23698673
Alignment:
Q  2 atgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtat 101  Q
    ||||||||||||||| ||||||||||||||||||||||||||||       ||| |||||||||||||||||||||||||||| || ||| ||||||||     
T  23698562 atgatttcctcaaattcataattttctcaaagtttgttatatccaaaaaa-tatatatttttagttaagaaccatacgaaaaggacctaaggaattgtac 23698660  T
Q  102 ctaagttttctcc 114  Q
    |||||||||||||    
T  23698661 ctaagttttctcc 23698673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 27928359 - 27928469
Alignment:
Q  3 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatc 102  Q
    |||||||||||| ||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||| ||| ||||||||      
T  27928359 tgatttcctcaa-tccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatacgaaaaacacctaaggaattgtaca 27928457  T
Q  103 taagttttctcc 114  Q
    ||||||||||||    
T  27928458 taagttttctcc 27928469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 50162599 - 50162708
Alignment:
Q  3 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatc 102  Q
    |||||| |||||||| |||||||||||||||||||||||||||       |||||| ||||||||||||||||||| |||||||| ||| |||||||| |    
T  50162599 tgattttctcaaatctataattttctcaaagtttgttatatccaaaaaaatatgtaattttagttaagaaccatacaaaaagcacctaaggaattgtacc 50162698  T
Q  103 taagttttct 112  Q
    ||||||||||    
T  50162699 taagttttct 50162708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 27926312 - 27926423
Alignment:
Q  3 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnn-tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtat 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||| ||| ||||||||     
T  27926312 tgatttcctcaa-tccataattttctcaaagtttgttatatccaaaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtac 27926410  T
Q  102 ctaagttttctcc 114  Q
     ||||||||||||    
T  27926411 ataagttttctcc 27926423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 1387890 - 1387778
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||       ||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  1387890 catgatttcctcaaattcataattttctcaaagtttattatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcac-taaggaattgta 1387793  T
Q  101 tctaagttttctcctt 116  Q
      ||||||||||||||    
T  1387792 -gtaagttttctcctt 1387778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 9895365 - 9895252
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||| |||||||||||||||||||||||||| |       |||||||||||||||||||||||||||||||| || |||| |||| ||    
T  9895365 catgatttcctcaaatacataattttctcaaagtttgttatat-caaaaaaatatgtatttttagttaagaaccatacgaaaagtacctaaaaaattata 9895267  T
Q  101 tctaagttttctcct 115  Q
     |||| |||||||||    
T  9895266 cctaaattttctcct 9895252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 40647230 - 40647116
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatat-ccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||| ||||||||||  ||| |||||||    
T  40647230 catgatttcctcaaatccataattttctcaaagtttgttatataaaaaaaaaatatgtatttttagttaagaaccacacgaaaagcagctaaggaattgt 40647131  T
Q  100 atctaagttttctcc 114  Q
    | |||||||||||||    
T  40647130 aactaagttttctcc 40647116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 6079496 - 6079384
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||| ||||||| |||||||| ||  ||| ||||||||    
T  6079496 catgatttcctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagtgaagaaccgtacgaaaaacatctaaggaattgta 6079398  T
Q  101 tctaagttttctcc 114  Q
     || ||||||||||    
T  6079397 cctgagttttctcc 6079384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 51789656 - 51789769
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||| ||||||||||||||||||| |||||||||         |||| ||||||||||||||||||||||||||||  ||| ||||||||    
T  51789656 catgatttcctcaattccataattttctcaaagtatgttatatctaaaaa---atgtgtttttagttaagaaccatacgaaaagcatttaaggaattgta 51789752  T
Q  101 tctaagttttctccttt 117  Q
     ||||||||||||||||    
T  51789753 cctaagttttctccttt 51789769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 26208533 - 26208451
Alignment:
Q  5 atttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcac 87  Q
    ||||| |||||||||||||||||||||||||||||||||||       ||||||||||||||| |||||||||||||||||||    
T  26208533 atttcttcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttgagaaccatacgaaaagcac 26208451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 48645073 - 48645168
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattg 98  Q
    ||||||||||||||||||||||||||||||||||||||||||| |       |||||||||||||||||||||| |||||||||||| |||| |||||    
T  48645073 catgatttcctcaaatccataattttctcaaagtttgttatat-ctaaaaaatatgtatttttagttaagaacc-tacgaaaagcacctaaaaaattg 48645168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 53 - 117
Target Start/End: Original strand, 49285085 - 49285149
Alignment:
Q  53 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 117  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||    
T  49285085 tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctccttt 49285149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 51276755 - 51276865
Alignment:
Q  2 atgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtat 101  Q
    ||||||||||||||||||||||||||||||||||| ||||||          |||||||||||| ||||||||||||||||||||| |||  |||||||     
T  51276755 atgatttcctcaaatccataattttctcaaagtttattatataaaaaaaaa-atgtatttttagctaagaaccatacgaaaagcacctaagaaattgtac 51276853  T
Q  102 ctaagttttctc 113  Q
    ||||||||||||    
T  51276854 ctaagttttctc 51276865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 57 - 118
Target Start/End: Original strand, 50627245 - 50627306
Alignment:
Q  57 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttta 118  Q
    |||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||    
T  50627245 tatttttagttaagaaccatacgaaaagcatataaggaattgtacctaagttttctccttta 50627306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 114
Target Start/End: Complemental strand, 21930481 - 21930380
Alignment:
Q  13 aaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttct 112  Q
    |||||||||||||||| ||||||||||||||||       ||||||||||||||||||||||||||||||| ||  ||| |||||||| || || |||||    
T  21930481 aaatccataattttcttaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatacgaaaaacaactaaggaattgtaactgaggtttct 21930382  T
Q  113 cc 114  Q
    ||    
T  21930381 cc 21930380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 957701 - 957617
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagc 85  Q
    |||||||| |||||||||||||||||||||||||||||||||||        |||||| ||||||||||||| ||||||||||||    
T  957701 catgattttctcaaatccataattttctcaaagtttgttatatcaaaaaaaatatgtaattttagttaagaatcatacgaaaagc 957617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 2125147 - 2125244
Alignment:
Q  19 ataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 117  Q
    ||||||||||||||||||||||||||        ||||||||||||||||||||| ||||||||||||| |||  ||||||| |||| |||||||||||    
T  2125147 ataattttctcaaagtttgttatatc-aaaaaaatatgtatttttagttaagaactatacgaaaagcacctaagaaattgtacctaaattttctccttt 2125244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 28244066 - 28243957
Alignment:
Q  5 atttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaag-----aaccatacgaaaagcacataaagaattgt 99  Q
    ||||||| |||||||||||||||||||||||||||||||||        |||||||||||||||||     |||||||| ||||||||||| ||||||||    
T  28244066 atttccttaaatccataattttctcaaagtttgttatatccaaaaaag-atgtatttttagttaagaaccaaaccatacaaaaagcacatagagaattgt 28243968  T
Q  100 atctaagtttt 110  Q
    | |||||||||    
T  28243967 acctaagtttt 28243957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 22339043 - 22339151
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||| |||||||||| ||||||||||||| |||| |||||         ||||||||||||||||||||||| ||||||||| |||||||||| |    
T  22339043 catgatttcatcaaatccatcattttctcaaagtctgttctatccaacaaagg-tgtatttttagttaagaaccatatgaaaagcacctaaagaattgca 22339141  T
Q  101 tctaagtttt 110  Q
     |||||||||    
T  22339142 cctaagtttt 22339151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 19954964 - 19954909
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 116  Q
    ||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||    
T  19954964 tttagttaagaactatacgaaaagcacataaggaattgtacctaagttttctcctt 19954909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 116
Target Start/End: Complemental strand, 36880350 - 36880287
Alignment:
Q  53 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 116  Q
    |||||||||||||||| |||||||||||||| ||| |||| ||||||| |||||||||||||||    
T  36880350 tatgtatttttagttaggaaccatacgaaaaacacttaaaaaattgtacctaagttttctcctt 36880287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 56 - 115
Target Start/End: Original strand, 36880624 - 36880683
Alignment:
Q  56 gtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 115  Q
    |||||||||||||||||||||||||||||||  ||| |||||||| ||||||||||||||    
T  36880624 gtatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcct 36880683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 27240977 - 27240923
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 115  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||    
T  27240977 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcct 27240923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 27926304 - 27926251
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 114  Q
    ||||||||||||||||||||||||||||||| ||||| || |||||||||||||    
T  27926304 tttagttaagaaccatacgaaaagcacataaggaattatacctaagttttctcc 27926251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 61 - 110
Target Start/End: Complemental strand, 27928351 - 27928302
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagtttt 110  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  27928351 tttagttaagaaccatacaaaaagcacataaggaattgtatctaagtttt 27928302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 362475 - 362531
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 117  Q
    |||||||||||| |||||||||||||| |||||||||||| |||| |||||||||||    
T  362475 tttagttaagaatcatacgaaaagcacctaaagaattgtacctaaattttctccttt 362531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 47940623 - 47940567
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 117  Q
    ||||||||||||||||||||||||||| |||  ||||||| ||||||||||||||||    
T  47940623 tttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctccttt 47940567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 36880623 - 36880584
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgtta 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  36880623 catgatttcctcaaatccataattttctcaaagtttgtta 36880584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 1387891 - 1387948
Alignment:
Q  56 gtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 113  Q
    |||| ||||||||||||||||||||||||||| ||| |||||||| |||| |||||||    
T  1387891 gtatctttagttaagaaccatacgaaaagcacctaaggaattgtacctaaattttctc 1387948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 2125123 - 2125070
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 114  Q
    |||||||||||||||||||||||||||||||  ||||||| |||| ||||||||    
T  2125123 tttagttaagaaccatacgaaaagcacataagaaattgtaactaaattttctcc 2125070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 118
Target Start/End: Complemental strand, 2854585 - 2854528
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttta 118  Q
    |||||||||||||||||||||||| |  ||| |||||||| |||||||||||||||||    
T  2854585 tttagttaagaaccatacgaaaagtatctaaggaattgtacctaagttttctccttta 2854528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 9978104 - 9978051
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 114  Q
    |||||||||||| |||||||||||||||||| |||||||| |||| ||||||||    
T  9978104 tttagttaagaatcatacgaaaagcacataaggaattgtacctaaattttctcc 9978051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 19797039 - 19796982
Alignment:
Q  56 gtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 113  Q
    |||||||||||||| ||||||||||||||||| |||  ||||||| ||||||||||||    
T  19797039 gtatttttagttaaaaaccatacgaaaagcacctaagaaattgtacctaagttttctc 19796982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 118
Target Start/End: Complemental strand, 23698555 - 23698498
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttta 118  Q
    |||||||||||||||||||||||| |  ||| |||||||| |||||||||||||||||    
T  23698555 tttagttaagaaccatacgaaaagtatctaaggaattgtacctaagttttctccttta 23698498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 29598434 - 29598393
Alignment:
Q  2 atgatttcctcaaatccataattttctcaaagtttgttatat 43  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  29598434 atgatttccttaaatccataattttctcaaagtttgttatat 29598393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 36007879 - 36007920
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttata 42  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  36007879 catgatttcctcaaatacataattttctcaaagtttgttata 36007920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 114
Target Start/End: Original strand, 25297966 - 25298018
Alignment:
Q  62 ttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 114  Q
    |||||||||||||||||||||| ||| ||| |||||||| |||||||||||||    
T  25297966 ttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttctcc 25298018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 27670255 - 27670171
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcac 87  Q
    ||||||||||| |||||||||||||||||||||||| |||||| |       |||||||||||||||||||| ||||| ||||||||    
T  27670255 catgatttccttaaatccataattttctcaaagttttttatattc-aaaaaatatgtatttttagttaagaatcatac-aaaagcac 27670171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 51789650 - 51789594
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 117  Q
    ||||||||| ||||||||||||| ||| ||| |||||||| ||||||||||||||||    
T  51789650 tttagttaaaaaccatacgaaaatcacctaaggaattgtacctaagttttctccttt 51789594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 100
Target Start/End: Original strand, 15324745 - 15324784
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  15324745 tttagttaagaaccatacgaaaagcacataaggaattgta 15324784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 48954267 - 48954212
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 116  Q
    ||||||||||||||||| |||||| || ||| |||||||| |||||||||||||||    
T  48954267 tttagttaagaaccatatgaaaagtacctaaggaattgtacctaagttttctcctt 48954212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 29598455 - 29598509
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 115  Q
    |||||||||||||||||| ||||| || ||| |||||||| ||||||||||||||    
T  29598455 tttagttaagaaccatacaaaaagtacctaacgaattgtacctaagttttctcct 29598509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 40647236 - 40647290
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 115  Q
    ||||||||| || |||||||||||||| ||| |||||||| ||||||||||||||    
T  40647236 tttagttaaaaatcatacgaaaagcacctaaggaattgtacctaagttttctcct 40647290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 42561348 - 42561294
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 115  Q
    ||||||||||||||||||||||||||| ||| ||||||||  |||| ||||||||    
T  42561348 tttagttaagaaccatacgaaaagcacctaaggaattgtacttaagatttctcct 42561294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 118
Target Start/End: Original strand, 28447987 - 28448048
Alignment:
Q  57 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttta 118  Q
    |||||||||||| |||| | ||||||| || ||||||||||||| ||||||||| |||||||    
T  28447987 tatttttagttatgaactaaacgaaaaacatataaagaattgtacctaagttttatccttta 28448048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 39015252 - 39015293
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttata 42  Q
    ||||||||| ||||||||||||||||||||||||| ||||||    
T  39015252 catgatttcttcaaatccataattttctcaaagttcgttata 39015293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 2302515 - 2302427
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatac-gaaaagcacat 89  Q
    |||||||||||||||| |||||||||||||||||| | || ||||        ||||| ||||||||||||||||||| |||||||||||    
T  2302515 catgatttcctcaaattcataattttctcaaagttcgctacatccaagaaag-atgtaattttagttaagaaccatacggaaaagcacat 2302427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 18651310 - 18651350
Alignment:
Q  2 atgatttcctcaaatccataattttctcaaagtttgttata 42  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  18651310 atgatttccccaaatccataattttctcaaaatttgttata 18651350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 49284353 - 49284397
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatcc 45  Q
    |||||||| || |||||||||||||| ||||||||||||||||||    
T  49284353 catgattttcttaaatccataattttttcaaagtttgttatatcc 49284397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 50856384 - 50856424
Alignment:
Q  5 atttcctcaaatccataattttctcaaagtttgttatatcc 45  Q
    |||||||||| ||||||||||||||||| ||||||||||||    
T  50856384 atttcctcaagtccataattttctcaaaatttgttatatcc 50856424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 957707 - 957762
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 116  Q
    |||||||||||| |||||||||| ||| |||  ||||||||||||||||| |||||    
T  957707 tttagttaagaatcatacgaaaaacacctaagaaattgtatctaagttttatcctt 957762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 112
Target Start/End: Original strand, 5189587 - 5189638
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttct 112  Q
    ||||||||||||||||||||||||||  ||| |||||||| |||| ||||||    
T  5189587 tttagttaagaaccatacgaaaagcatctaaggaattgtacctaaattttct 5189638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 112
Target Start/End: Complemental strand, 14387068 - 14387017
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttct 112  Q
    |||||||||||||||||||||| |||  ||| |||||||| |||||||||||    
T  14387068 tttagttaagaaccatacgaaatgcatctaaggaattgtacctaagttttct 14387017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 21930496 - 21930551
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 116  Q
    ||||||||||||||||||||||| ||| |||  ||||||| |||| ||||||||||    
T  21930496 tttagttaagaaccatacgaaaaacacctaagtaattgtacctaaattttctcctt 21930551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 26208543 - 26208598
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 116  Q
    ||||||| ||||||||||||||||||| ||| ||||| ||  ||||||||||||||    
T  26208543 tttagttcagaaccatacgaaaagcacctaaggaattatacataagttttctcctt 26208598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 99
Target Start/End: Original strand, 27670261 - 27670299
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgt 99  Q
    ||||||||| ||||||||||||||||||||| |||||||    
T  27670261 tttagttaaaaaccatacgaaaagcacataaggaattgt 27670299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 110
Target Start/End: Complemental strand, 50856374 - 50856325
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagtttt 110  Q
    ||||| |||||| |||||||||||||| ||||||||| || |||||||||    
T  50856374 tttagctaagaatcatacgaaaagcacctaaagaattttacctaagtttt 50856325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 46691208 - 46691268
Alignment:
Q  58 atttttagttaagaaccatac-gaaaagcacataaagaattgtatctaagttttctccttt 117  Q
    |||||||||||| |||||||| ||||| ||  |||||||||||| ||||||||| ||||||    
T  46691208 atttttagttaaaaaccatacagaaaaacatctaaagaattgtacctaagttttgtccttt 46691268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 2e-36; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 23835989 - 23835875
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  23835989 catgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgta 23835890  T
Q  101 tctaagttttctcct 115  Q
      |||||||||||||    
T  23835889 cataagttttctcct 23835875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 1924039 - 1924153
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||| ||| ||||||||    
T  1924039 catgatttcctcgaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatacgaaaaacacctaaggaattgta 1924138  T
Q  101 tctaagttttctcct 115  Q
     ||||||||||||||    
T  1924139 cctaagttttctcct 1924153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 34490568 - 34490455
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  34490568 catgatttcctcagatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaaacacctaaagaattgta 34490470  T
Q  101 tctaagttttctcct 115  Q
     ||||||||||||||    
T  34490469 cctaagttttctcct 34490455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 3116987 - 3116875
Alignment:
Q  2 atgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtat 101  Q
    ||||||| ||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||  |||||||||||     
T  3116987 atgattttctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcaccaaaagaattgtac 3116889  T
Q  102 ctaagttttctcct 115  Q
    ||||||||||||||    
T  3116888 ctaagttttctcct 3116875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 24101891 - 24102003
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  24101891 catgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgta 24101989  T
Q  101 tctaagttttctcc 114  Q
      ||||||||||||    
T  24101990 cttaagttttctcc 24102003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 20892993 - 20892883
Alignment:
Q  5 atttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatcta 104  Q
    ||||| |||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||| |||  ||||||| |||    
T  20892993 atttcatcaaatccataattttctcaaagtttgttatatccataaaaatatgtatttttagttaagaaccatacgaaaagcacctaagaaattgtaccta 20892894  T
Q  105 agttttctcct 115  Q
    |||||||||||    
T  20892893 agttttctcct 20892883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 45408737 - 45408623
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||| |||| ||| ||| ||||||||    
T  45408737 catgatttcctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaagaaccatacaaaaaacacctaaggaattgta 45408639  T
Q  101 tctaagttttctcctt 116  Q
     |||||||||||||||    
T  45408638 cctaagttttctcctt 45408623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 16705844 - 16705731
Alignment:
Q  2 atgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtat 101  Q
    ||||||| |||||| |||||||||| ||||||||||||||||||       ||||||||||||||||||||||||||||||||||| ||| ||||||||     
T  16705844 atgattttctcaaagccataattttatcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtac 16705746  T
Q  102 ctaagttttctcctt 116  Q
    |||||||||||||||    
T  16705745 ctaagttttctcctt 16705731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 7737177 - 7737065
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||| ||||| |||||||| |||  |||||||    
T  7737177 catgatttcctcaaagccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaatcataccaaaagcacctaagaaattgta 7737078  T
Q  101 tctaagttttctc 113  Q
     ||||||||||||    
T  7737077 cctaagttttctc 7737065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 2 - 115
Target Start/End: Original strand, 9281407 - 9281519
Alignment:
Q  2 atgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtat 101  Q
    ||||||||||||||| ||||||||||||||||||||||||||||       ||| |||||||||||||||||||||||||||| || ||| ||||||||     
T  9281407 atgatttcctcaaattcataattttctcaaagtttgttatatccaaaaaa-tatatatttttagttaagaaccatacgaaaaggacctaaggaattgtac 9281505  T
Q  102 ctaagttttctcct 115  Q
    ||||||||||||||    
T  9281506 ctaagttttctcct 9281519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 12850601 - 12850713
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||  | | |||||| |    
T  12850601 catgatttcctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaagaaccatacgaaaagcatctgaggaattgga 12850699  T
Q  101 tctaagttttctcc 114  Q
     |||||||||||||    
T  12850700 cctaagttttctcc 12850713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 22269834 - 22269722
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||| || |||||||||| ||| ||| ||||||||    
T  22269834 catgatttcctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaaaaatcatacgaaaaacacctaaggaattgta 22269736  T
Q  101 tctaagttttctcc 114  Q
     |||||||||||||    
T  22269735 cctaagttttctcc 22269722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 34455993 - 34455885
Alignment:
Q  5 atttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatcta 104  Q
    ||||||||||||| |||||||||||||||||||||||||||       |||||||||||| |||||||||||||||||||||| ||| |||||||| |||    
T  34455993 atttcctcaaatctataattttctcaaagtttgttatatccaaaaaa-tatgtatttttaattaagaaccatacgaaaagcacctaaggaattgtaccta 34455895  T
Q  105 agttttctcc 114  Q
    ||||||||||    
T  34455894 agttttctcc 34455885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 42713836 - 42713952
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||       |||||||||||||||||||| ||| |||||||||| |||  |||||||    
T  42713836 catgattttctcaaatccataattttctcaaagtttattatatccaaaaaaatatgtatttttagttaagaatcatgcgaaaagcacttaagaaattgta 42713935  T
Q  101 tctaagttttctccttt 117  Q
     ||||||||||||||||    
T  42713936 cctaagttttctccttt 42713952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 2818778 - 2818671
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||       |||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  2818778 catgatttcctcaaatccataattttctcaaagtttgatatatccaaaaaa-tatgtatttttagttaagaatcatacgaaaagcacctaaggaattgta 2818680  T
Q  101 tctaagttt 109  Q
     ||||||||    
T  2818679 cctaagttt 2818671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 6605847 - 6605737
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||       ||||||||||||||||||||   |||||||||||||||| ||||||||    
T  6605847 catgatttcctcaaatgcataattttctcaaagtttgttatatccaaataa-tatgtatttttagttaagaa---tacgaaaagcacataaggaattgta 6605752  T
Q  101 tctaagttttctcct 115  Q
     ||||||||||||||    
T  6605751 cctaagttttctcct 6605737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 27920684 - 27920564
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||       |||||| |||||||||||| ||||||||||||||| |||  |||||||    
T  27920684 catgatttcctcaaatccataattttttcaaagtttgttatatcc-aaaaaatatgtagttttagttaagacccatacgaaaagcacctaagaaattgta 27920586  T
Q  101 tctaagttttctcctttagataa 123  Q
     ||||||||||||||| ||||||    
T  27920585 -ctaagttttctccttaagataa 27920564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 9933628 - 9933743
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||| ||||||||||||||||||||||||||| |||||||        ||||||||||||||||||||||||||||||||||| |||  |||||||    
T  9933628 catgattttctcaaatccataattttctcaaagtttattatatc-taaaaaatatgtatttttagttaagaaccatacgaaaagcacctaagaaattgta 9933726  T
Q  101 tctaagttttctccttt 117  Q
     |||| |||||||||||    
T  9933727 cctaaattttctccttt 9933743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 29229422 - 29229534
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaa-gtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgt 99  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||       |||||||||||||||||||||||||||||||| |  |||||||||||    
T  29229422 catgatttcctcaaatccataattttctcaaaagtttattatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagtaactaaagaattgt 29229520  T
Q  100 atctaagttttctcc 114  Q
    | |||||||||||||    
T  29229521 a-ctaagttttctcc 29229534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 29342722 - 29342834
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaa-gtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgt 99  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||       |||||||||||||||||||||||||||||||| |  |||||||||||    
T  29342722 catgatttcctcaaatccataattttctcaaaagtttattatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagtaactaaagaattgt 29342820  T
Q  100 atctaagttttctcc 114  Q
    | |||||||||||||    
T  29342821 a-ctaagttttctcc 29342834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 56 - 115
Target Start/End: Original strand, 34490569 - 34490628
Alignment:
Q  56 gtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 115  Q
    |||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||    
T  34490569 gtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcct 34490628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 24101890 - 24101829
Alignment:
Q  56 gtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 117  Q
    |||| ||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||    
T  24101890 gtatatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctccttt 24101829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 9850817 - 9850923
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||| || |||||||||||||||||||| |||||||||||        ||||||||||||||||||||||||||||||| |||     ||||||||    
T  9850817 catgattttcttaaatccataattttctcaaaatttgttatatc--aaaaaatatgtatttttagttaagaaccatacgaaaaacac----ggaattgta 9850910  T
Q  101 tctaagttttctc 113  Q
     ||||||||||||    
T  9850911 cctaagttttctc 9850923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 2818784 - 2818837
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 114  Q
    ||||||||||||||||||||||| ||| |||||||||||| |||||||||||||    
T  2818784 tttagttaagaaccatacgaaaaacacctaaagaattgtacctaagttttctcc 2818837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 1924033 - 1923977
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 117  Q
    ||||||||||||||||||||||||||| |||  ||||||| ||||||||||||||||    
T  1924033 tttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctccttt 1923977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 7116478 - 7116374
Alignment:
Q  5 atttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatcta 104  Q
    ||||| ||||||||||||||||||||||| ||||| |||||         ||||||||||||| |||||||||||||||| |  |||||||||||| |||    
T  7116478 atttcatcaaatccataattttctcaaagattgttctatccaacaaagg-tgtatttttagttgagaaccatacgaaaagtatctaaagaattgtaccta 7116380  T
Q  105 agtttt 110  Q
    ||||||    
T  7116379 agtttt 7116374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 7737183 - 7737238
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 116  Q
    |||||||||||| |||||||||||||| ||| |||||||| |||||||||||||||    
T  7737183 tttagttaagaatcatacgaaaagcacctaaggaattgtacctaagttttctcctt 7737238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 27920690 - 27920745
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 116  Q
    ||||||||||||||||||||||||||  |||| ||||||| |||||||||||||||    
T  27920690 tttagttaagaaccatacgaaaagcagctaaaaaattgtacctaagttttctcctt 27920745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 43476058 - 43475946
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatcc-nnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgt 99  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||        ||| ||||||||||| | ||||||||||||| ||| | | |||||||    
T  43476058 catgatttcctcaaattcataattttctcaaagtttattatatccaaaaaaaatatatatttttagtttaaaaccatacgaaaatcacctgaggaattgt 43475959  T
Q  100 atctaagttttct 112  Q
    |  ||||||||||    
T  43475958 acataagttttct 43475946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 117
Target Start/End: Original strand, 6605858 - 6605908
Alignment:
Q  67 taagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 117  Q
    |||||||||||| |||||||| |||||||||||| ||||||||||||||||    
T  6605858 taagaaccatacaaaaagcacctaaagaattgtacctaagttttctccttt 6605908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 118
Target Start/End: Original strand, 3116994 - 3117051
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttta 118  Q
    ||||||||||||||||||||||||||  ||  |||||||| |||||||||||||||||    
T  3116994 tttagttaagaaccatacgaaaagcagctatggaattgtacctaagttttctccttta 3117051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 20892997 - 20893057
Alignment:
Q  55 tgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 116  Q
    |||||||||||||||||| |||||||||||||| ||| ||||| || |||||||||||||||    
T  20892997 tgtatttttagttaagaatcatacgaaaagcacctaaggaattata-ctaagttttctcctt 20893057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 45408743 - 45408796
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 114  Q
    |||| |||||||||||||||||||||| ||| |||||||| |||||||||||||    
T  45408743 tttaattaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 45408796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 9933622 - 9933567
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 117  Q
    ||||||||||||||||| ||||||||| ||| |||||||| ||||||||||||||||    
T  9933622 tttagttaagaaccataggaaaagcac-taatgaattgtacctaagttttctccttt 9933567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 22269838 - 22269894
Alignment:
Q  59 tttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 115  Q
    ||||||||||||||||||||||||||||  ||| ||||||||  |||||||||||||    
T  22269838 tttttagttaagaaccatacgaaaagcatctaaggaattgtacgtaagttttctcct 22269894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 42713830 - 42713774
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 117  Q
    ||||||||||||||||||||||| ||| ||| ||||| ||||||| |||||||||||    
T  42713830 tttagttaagaaccatacgaaaaacacctaaggaattatatctaaattttctccttt 42713774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 43858552 - 43858608
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 117  Q
    |||||||||||||||||||||||| || ||| |||||||| |||| |||||||||||    
T  43858552 tttagttaagaaccatacgaaaagtacctaaggaattgtacctaaattttctccttt 43858608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 16705851 - 16705904
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 114  Q
    ||||||||| ||||||||||||||||| ||| |||||||| |||| ||||||||    
T  16705851 tttagttaaaaaccatacgaaaagcacctaaggaattgtacctaaattttctcc 16705904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 118
Target Start/End: Complemental strand, 17500059 - 17500002
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttta 118  Q
    ||||||||||||||||||||||| |||||||  ||||||||  ||||||| |||||||    
T  17500059 tttagttaagaaccatacgaaaaacacataagaaattgtattcaagttttttccttta 17500002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 10552999 - 10553051
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 113  Q
    |||||||||||| |||||||||| ||| ||| |||||||| ||||||||||||    
T  10552999 tttagttaagaatcatacgaaaaacacctaaggaattgtacctaagttttctc 10553051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 90
Target Start/End: Original strand, 22346486 - 22346522
Alignment:
Q  54 atgtatttttagttaagaaccatacgaaaagcacata 90  Q
    |||||||||||||||| ||||||||||||||||||||    
T  22346486 atgtatttttagttaaaaaccatacgaaaagcacata 22346522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 116
Target Start/End: Complemental strand, 37341023 - 37340964
Alignment:
Q  57 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 116  Q
    |||||||||||||||||||||| ||||  || |||| ||||||| ||||||||| |||||    
T  37341023 tatttttagttaagaaccatacaaaaaatacttaaaaaattgtacctaagttttgtcctt 37340964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 39243095 - 39243150
Alignment:
Q  55 tgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagtttt 110  Q
    |||||||||||| ||||||||||| ||||  || ||||||||||||||||| ||||    
T  39243095 tgtatttttagtcaagaaccatacaaaaaatacctaaagaattgtatctaaatttt 39243150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 17434755 - 17434838
Alignment:
Q  17 ccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||||||||||||||||       ||| | | |||||||||||| |||||||||| ||  ||| ||||||||    
T  17434755 ccataattttctcaaagtttgttatatccaaaaaaatatatttatttagttaagaatcatacgaaaaacatctaaggaattgta 17434838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 43476064 - 43476118
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 115  Q
    ||||||||||||||||||||||| ||| ||| ||||| || |||| |||||||||    
T  43476064 tttagttaagaaccatacgaaaaacacctaaggaattatacctaaattttctcct 43476118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 9281400 - 9281347
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 114  Q
    ||||||||||||||||| |||||| || ||| |||||||| | |||||||||||    
T  9281400 tttagttaagaaccatatgaaaagtacctaaggaattgtaccaaagttttctcc 9281347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 117
Target Start/End: Complemental strand, 29229414 - 29229358
Alignment:
Q  63 tagttaagaaccatacgaaaa--gcacataaagaattgtatctaagttttctccttt 117  Q
    |||||||||| ||||||||||  ||||||||  ||||||| ||||||||||||||||    
T  29229414 tagttaagaatcatacgaaaaaagcacataagtaattgtacctaagttttctccttt 29229358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 117
Target Start/End: Complemental strand, 29342714 - 29342658
Alignment:
Q  63 tagttaagaaccatacgaaaa--gcacataaagaattgtatctaagttttctccttt 117  Q
    |||||||||| ||||||||||  ||||||||  ||||||| ||||||||||||||||    
T  29342714 tagttaagaatcatacgaaaaaagcacataagtaattgtacctaagttttctccttt 29342658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 114
Target Start/End: Original strand, 8111692 - 8111744
Alignment:
Q  62 ttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 114  Q
    ||||||||||||||||| ||||| || |||  ||||||| |||||||||||||    
T  8111692 ttagttaagaaccatacaaaaaggacctaagaaattgtaactaagttttctcc 8111744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 9850811 - 9850779
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaag 93  Q
    ||||||||||||||||||||||||||| |||||    
T  9850811 tttagttaagaaccatacgaaaagcacctaaag 9850779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 9e-36; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 20184297 - 20184414
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||| |||||||||||||  ||| ||||||||    
T  20184297 catgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaatcatacgaaaagcagctaaggaattgta 20184396  T
Q  101 tctaagttttctccttta 118  Q
     |||||||||||||||||    
T  20184397 cctaagttttctccttta 20184414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 24836132 - 24836016
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||| ||||||||||||||||||| |||  |||||||    
T  24836132 catgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttnagaaccatacgaaaagcacctaagcaattgta 24836034  T
Q  101 tctaagttttctccttta 118  Q
     |||||||||||||||||    
T  24836033 cctaagttttctccttta 24836016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 31231673 - 31231790
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatc-cnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||  |       ||||||||||||||||||||||||||||||||||| ||| |||||||    
T  31231673 catgatttcctcaaatccataattttctcaaagtttgttatatgtccaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgt 31231772  T
Q  100 atctaagttttctccttt 117  Q
    | ||||||||||||||||    
T  31231773 acctaagttttctccttt 31231790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 38883333 - 38883220
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||  ||| ||||||||    
T  38883333 catgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcatctaaggaattgta 38883235  T
Q  101 tctaagttttctcct 115  Q
     ||||||||||||||    
T  38883234 cctaagttttctcct 38883220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 30594805 - 30594690
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||| || |||||||||| ||| ||||||||    
T  30594805 catgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaactatgcgaaaagcacctaaggaattgta 30594707  T
Q  101 tctaagttttctccttt 117  Q
     ||||||||||||||||    
T  30594706 cctaagttttctccttt 30594690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 39617900 - 39618012
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||       ||| ||||||||||||||||| ||||||||||||| ||||||||||||    
T  39617900 catgatttcctccaatccataattttctcaaagtttgttatatccaaaaaaatatttatttttagttaagaactatacgaaaagcacctaaagaattgta 39617999  T
Q  101 tctaagttttctcc 114  Q
     |||||||||||||    
T  39618000 -ctaagttttctcc 39618012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 34052391 - 34052279
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||| ||| ||| ||||    
T  34052391 catgatttcctcaaattcataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacctaaggaaatgta 34052293  T
Q  101 tctaagttttctcc 114  Q
     |||||||||||||    
T  34052292 cctaagttttctcc 34052279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 30259125 - 30259239
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||| ||||||||  || ||||||||    
T  30259125 catgattttctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacaaaaagcacccaaggaattgta 30259223  T
Q  101 tctaagttttctcctt 116  Q
     |||||||||||||||    
T  30259224 cctaagttttctcctt 30259239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 35339337 - 35339447
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||       |||||||||||| ||||||||||||||||||| |||||| ||||||||    
T  35339337 catgatttcttcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttatttaagaaccatacgaaaagtacataaggaattgta 35339435  T
Q  101 tctaagttttct 112  Q
     |||||||||||    
T  35339436 cctaagttttct 35339447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 10936529 - 10936642
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||| ||||||||||| |||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  10936529 catgacttcctcaaatctataattttctcaaagtttgttataaccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgta 10936627  T
Q  101 tctaagttttctcct 115  Q
     ||||||||||||||    
T  10936628 cctaagttttctcct 10936642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 3953101 - 3953213
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||       |||||||||||||||||||||||||| ||||| || |||  |||||||    
T  3953101 catgatttcctcaaatccataattttcacaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacaaaaagtacctaagtaattgta 3953199  T
Q  101 tctaagttttctcc 114  Q
    ||||||||||||||    
T  3953200 tctaagttttctcc 3953213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 38528469 - 38528587
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnn-tatgtatttttagttaagaaccatacgaaaagcacataaagaattgt 99  Q
    ||||| |||||| ||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||| ||| |||||||    
T  38528469 catgaattcctcgaatccataattttctcaaagtttgttatataaaaaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgt 38528568  T
Q  100 atctaagttttctccttta 118  Q
    | |||||||||||||||||    
T  38528569 acctaagttttctccttta 38528587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 12142305 - 12142192
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||| |||||||||||||||||||||||| |||||||||||       ||| ||||||||||||||||||||||  ||||||| ||| ||||||||    
T  12142305 catgattttctcaaatccataattttctcaaagattgttatatccaaaaatatatatatttttagttaagaaccatacccaaagcacgtaaggaattgta 12142206  T
Q  101 tctaagttttctcc 114  Q
     |||||||||||||    
T  12142205 cctaagttttctcc 12142192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 9285773 - 9285888
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||||||||||  |||||||| ||||||||||||||||||       |||||||||||| ||||||||||||||||||| || ||||||||||||    
T  9285773 catgatttcctcaaatttataattttatcaaagtttgttatatccaaaaaa-tatgtatttttatttaagaaccatacgaaaagtacctaaagaattgta 9285871  T
Q  101 tctaagttttctccttt 117  Q
     |||| |||||||||||    
T  9285872 cctaaattttctccttt 9285888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 9289840 - 9289955
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||||||||||  |||||||| ||||||||||||||||||       |||||||||||| ||||||||||||||||||| || ||||||||||||    
T  9289840 catgatttcctcaaatttataattttatcaaagtttgttatatccaaaaaa-tatgtatttttatttaagaaccatacgaaaagtacctaaagaattgta 9289938  T
Q  101 tctaagttttctccttt 117  Q
     |||| |||||||||||    
T  9289939 cctaaattttctccttt 9289955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 25742494 - 25742603
Alignment:
Q  5 atttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatcta 104  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||| ||||||||||||||||| |||  ||||| |  ||    
T  25742494 atttcctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaacaaccatacgaaaagcacttaagaaattgcactta 25742592  T
Q  105 agttttctcct 115  Q
    |||||||||||    
T  25742593 agttttctcct 25742603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 48103478 - 48103365
Alignment:
Q  3 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatc 102  Q
    |||||||||||||||||||||  ||||||||||||||||||||       |||||||||||||||||||| |||||||||| ||| |||  ||||||| |    
T  48103478 tgatttcctcaaatccataataatctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaatcatacgaaaaacacctaagaaattgtacc 48103380  T
Q  103 taagttttctccttt 117  Q
    |||||||||||||||    
T  48103379 taagttttctccttt 48103365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 45997567 - 45997685
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||||||||||||||||||||||| ||||||||       ||||||||||||||||||||||||||  ||| ||| ||| |||||| |    
T  45997567 catgatttcctcaaatccataattttctcaaagtttattatatcc-aaaaaatatgtatttttagttaagaaccatacctaaaacacctaaggaattgca 45997665  T
Q  101 tctaagttttctcctttaga 120  Q
     ||| |||||||||| ||||    
T  45997666 cctaggttttctcctctaga 45997685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 24123815 - 24123898
Alignment:
Q  2 atgatttcctcaaatccataattttctcaaagtttgttatatcc-nnnnnnntatgtatttttagttaagaaccatacgaaaag 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||        |||||||||||| |||||||||||||||||||    
T  24123815 atgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaaatatgtatttttaattaagaaccatacgaaaag 24123898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 35665691 - 35665786
Alignment:
Q  17 ccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 113  Q
    |||| ||||||||||||||||||||||||       ||||||||||||||||| ||||||||||||||||| ||| |||||||| ||||||||||||    
T  35665691 ccatgattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaaaaaccatacgaaaagcacctaaggaattgtacctaagttttctc 35665786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 29277949 - 29277838
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||||| ||||||| |||||||||||| |||||| |||||       |  ||||||||||||||||||||||| ||||| || ||||||||||||    
T  29277949 catgatttccttaaatccaaaattttctcaaactttgttgtatccaaaacagt--gtatttttagttaagaaccatacaaaaagtacctaaagaattgta 29277852  T
Q  101 tctaagttttctcc 114  Q
     |||||||||||||    
T  29277851 cctaagttttctcc 29277838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 61 - 118
Target Start/End: Complemental strand, 35339331 - 35339274
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttta 118  Q
    ||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||    
T  35339331 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctccttta 35339274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 37093880 - 37093762
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||||||||||  |||||||||||||||||||||||||||       ||| |||||||| ||||||| ||||||||||  || |||  |||||||    
T  37093880 catgatttcctcaaatttataattttctcaaagtttgttatatcc-aaaaaatatatatttttaattaagaatcatacgaaaaatacctaagaaattgta 37093782  T
Q  101 tctaagttttctcctttaga 120  Q
     |||| ||||||||||||||    
T  37093781 cctaaattttctcctttaga 37093762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 39143775 - 39143877
Alignment:
Q  5 atttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatcta 104  Q
    ||||||||||||||||||| |||||||||||||||||||         ||| ||| | ||||||||||||||||||||| ||| ||| |||||||| |||    
T  39143775 atttcctcaaatccataatattctcaaagtttgttatat-------aatatatatatatagttaagaaccatacgaaaaacacctaatgaattgtaccta 39143867  T
Q  105 agttttctcc 114  Q
    ||||||||||    
T  39143868 agttttctcc 39143877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 40358227 - 40358146
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaa 83  Q
    |||||||||||||||| |||||||||||||||||||||||||| |       |||| ||||||||||||||||||||||||||    
T  40358227 catgatttcctcaaattcataattttctcaaagtttgttatat-caaaaaaatatgcatttttagttaagaaccatacgaaaa 40358146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 47237488 - 47237601
Alignment:
Q  5 atttcctcaaatccataattttctcaaagtttgttatatccnnnnnnnta--tgtatttttagttaagaaccatacgaaaagcacataaagaattgtatc 102  Q
    |||||||| ||||||||||||||||||||||||||||||          |  ||||||||||||||||||||||||||||||||| | |  ||||||| |    
T  47237488 atttcctcgaatccataattttctcaaagtttgttatataaaaaaaaaaaaatgtatttttagttaagaaccatacgaaaagcaccttagaaattgtacc 47237587  T
Q  103 taagttttctcctt 116  Q
    ||||||||||||||    
T  47237588 taagttttctcctt 47237601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 56 - 115
Target Start/End: Complemental strand, 35665691 - 35665632
Alignment:
Q  56 gtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 115  Q
    |||||||||||||||||||||||||||||||| |||  ||||||| ||||||||||||||    
T  35665691 gtatttttagttaagaaccatacgaaaagcacctaagcaattgtacctaagttttctcct 35665632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 33721879 - 33721825
Alignment:
Q  62 ttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 116  Q
    |||||||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  33721879 ttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcctt 33721825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 24836138 - 24836191
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 114  Q
    ||||||||||||||||||||||||||| ||| |||||||| |||||||||||||    
T  24836138 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 24836191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 57 - 114
Target Start/End: Original strand, 38883335 - 38883392
Alignment:
Q  57 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 114  Q
    ||||||||||||||||||||||||||||||  ||| |||||||| |||||||||||||    
T  38883335 tatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcc 38883392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 3953095 - 3953039
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 117  Q
    ||||||||| |||||||||||||| |||||| |||||||| ||||||||||||||||    
T  3953095 tttagttaaaaaccatacgaaaagtacataaggaattgtacctaagttttctccttt 3953039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 34052397 - 34052452
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 116  Q
    ||||| ||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  34052397 tttagctaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcctt 34052452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 20184291 - 20184238
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 114  Q
    |||||||||||| |||||||||||||| ||| |||||||| |||||||||||||    
T  20184291 tttagttaagaatcatacgaaaagcacctaaggaattgtacctaagttttctcc 20184238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 31231667 - 31231614
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 114  Q
    |||||||||||||||||| |||||||| ||| |||||||| |||||||||||||    
T  31231667 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctcc 31231614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 48103483 - 48103536
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 114  Q
    |||||||||||||||||| |||||||| ||||||||||||  ||||||||||||    
T  48103483 tttagttaagaaccatacaaaaagcacctaaagaattgtagataagttttctcc 48103536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 119
Target Start/End: Complemental strand, 17101699 - 17101649
Alignment:
Q  69 agaaccatacgaaaagcacataaagaattgtatctaagttttctcctttag 119  Q
    ||||||||||||||||||| |||  ||||||| ||||||||||||||||||    
T  17101699 agaaccatacgaaaagcacctaagaaattgtacctaagttttctcctttag 17101649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 24123813 - 24123755
Alignment:
Q  56 gtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 114  Q
    ||||||||||||| ||||||||| ||||| |||||| |||||||| |||| ||||||||    
T  24123813 gtatttttagttaggaaccatacaaaaagtacataaggaattgtacctaaattttctcc 24123755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 30259119 - 30259065
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 115  Q
    ||||||||||||||||| ||||||||| ||| |||||||| ||||||||| ||||    
T  30259119 tttagttaagaaccataggaaaagcacctaaggaattgtacctaagttttatcct 30259065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 1403031 - 1402990
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttata 42  Q
    ||||||||||||||||| |||||||||||||| |||||||||    
T  1403031 catgatttcctcaaatctataattttctcaaaatttgttata 1402990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 7955041 - 7955004
Alignment:
Q  54 atgtatttttagttaagaaccatacgaaaagcacataa 91  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  7955041 atgtatttttagttaagaaccatacaaaaagcacataa 7955004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 10398431 - 10398390
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttata 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  10398431 catgatttcctcaaatacataatcttctcaaagtttgttata 10398390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 10936523 - 10936470
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 114  Q
    |||||||||||||| |||||||||||| ||| ||||||||  ||||||||||||    
T  10936523 tttagttaagaaccgtacgaaaagcacctaaggaattgtacataagttttctcc 10936470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 25572924 - 25572883
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttata 42  Q
    ||||||||| ||||| ||||||||||||||||||||||||||    
T  25572924 catgatttcttcaaaaccataattttctcaaagtttgttata 25572883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 110
Target Start/End: Complemental strand, 38528451 - 38528394
Alignment:
Q  53 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagtttt 110  Q
    |||||||||||||||||||||||||| |||||||  ||| |||||||| |||| ||||    
T  38528451 tatgtatttttagttaagaaccatacaaaaagcatttaaggaattgtacctaactttt 38528394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 45997561 - 45997508
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 114  Q
    |||||||||||||||||| |||||||||||   ||||||| |||||||||||||    
T  45997561 tttagttaagaaccatacaaaaagcacatatgaaattgtacctaagttttctcc 45997508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 30594811 - 30594866
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 116  Q
    ||||||||||||||||||||||||||  ||| |||||||| ||||| |||| ||||    
T  30594811 tttagttaagaaccatacgaaaagcatctaaggaattgtacctaagctttcccctt 30594866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 33749756 - 33749713
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatc 44  Q
    ||||||||||| |||| ||||||||||||||||||| |||||||    
T  33749756 catgatttccttaaattcataattttctcaaagtttattatatc 33749713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 38
Target Start/End: Complemental strand, 44148757 - 44148722
Alignment:
Q  3 tgatttcctcaaatccataattttctcaaagtttgt 38  Q
    ||||||||| ||||||||||||||||||||||||||    
T  44148757 tgatttccttaaatccataattttctcaaagtttgt 44148722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 12142311 - 12142365
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 115  Q
    ||||||||||||| ||||||||| ||||||| |||||||| | || |||||||||    
T  12142311 tttagttaagaactatacgaaaaacacataaggaattgtacccaaattttctcct 12142365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 9285767 - 9285714
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 114  Q
    |||| ||||||||||||| ||||||||  || |||||||| |||||||||||||    
T  9285767 tttaattaagaaccatacaaaaagcaccaaatgaattgtacctaagttttctcc 9285714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 9289834 - 9289781
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 114  Q
    |||| ||||||||||||| ||||||||  || |||||||| |||||||||||||    
T  9289834 tttaattaagaaccatacaaaaagcaccaaatgaattgtacctaagttttctcc 9289781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 114
Target Start/End: Original strand, 17101700 - 17101745
Alignment:
Q  69 agaaccatacgaaaagcacataaagaattgtatctaagttttctcc 114  Q
    ||||||||||||||||||| |||  ||||||| |||||||||||||    
T  17101700 agaaccatacgaaaagcacctaagaaattgtacctaagttttctcc 17101745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 16876515 - 16876559
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatcc 45  Q
    |||||||| ||||||||| ||||||||| | ||||||||||||||    
T  16876515 catgattttctcaaatccgtaattttcttagagtttgttatatcc 16876559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 37093886 - 37093942
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 117  Q
    ||||||||| |||||||||||||| || |||  |||||||||||| |||||| ||||    
T  37093886 tttagttaaaaaccatacgaaaagtacctaagaaattgtatctaaattttctacttt 37093942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 39143765 - 39143713
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 113  Q
    |||||| |||||||||||||||||||   || |||||||| ||||||||||||    
T  39143765 tttagtcaagaaccatacgaaaagcatccaatgaattgtacctaagttttctc 39143713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 95
Target Start/End: Original strand, 40596797 - 40596837
Alignment:
Q  55 tgtatttttagttaagaaccatacgaaaagcacataaagaa 95  Q
    |||||||||||||||||||||||| |||| ||| |||||||    
T  40596797 tgtatttttagttaagaaccatacaaaaaacacctaaagaa 40596837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 9e-36; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 13439808 - 13439691
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||| |||||||||||||||||| || ||| ||||||||    
T  13439808 catgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagctaagaaccatacgaaaagtacttaaggaattgta 13439709  T
Q  101 tctaagttttctccttta 118  Q
     |||||||||||||||||    
T  13439708 cctaagttttctccttta 13439691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 21380000 - 21380115
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||       ||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  21380000 catgatttcctcaaattcataattttctcaatgtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgta 21380098  T
Q  101 tctaagttttctccttt 117  Q
     ||||||||||||||||    
T  21380099 cctaagttttctccttt 21380115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 885497 - 885384
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||| |||||||| ||| ||||||||    
T  885497 catgattttctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacaaaaagcacctaaggaattgta 885399  T
Q  101 tctaagttttctcct 115  Q
     ||||||||||||||    
T  885398 cctaagttttctcct 885384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 8091172 - 8091063
Alignment:
Q  3 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatc 102  Q
    ||||||||| |||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  8091172 tgatttccttaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtatc 8091074  T
Q  103 taagttttctc 113  Q
    ||| |||||||    
T  8091073 taaattttctc 8091063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 11687202 - 11687314
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||  ||| ||||||||    
T  11687202 catgatttcctcaaatccataattttctcaaagtttgttatatc-aaaaaaatatgtatttttagttaagaaccatacgaaaagcatctaaggaattgta 11687300  T
Q  101 tctaagttttctcc 114  Q
     |||||||||||||    
T  11687301 cctaagttttctcc 11687314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 4890539 - 4890654
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||       ||||  ||||||||||||||||||||||||||||| ||| ||||||||    
T  4890539 catgatttcctcaaattcataattttctcaaagtttgttatatccaaaaaaatatgcgtttttagttaagaaccatacgaaaagcacctaaggaattgta 4890638  T
Q  101 tctaagttttctcctt 116  Q
     |||| ||||||||||    
T  4890639 cctaaattttctcctt 4890654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 15546744 - 15546629
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||| |||| ||  ||| ||||||||    
T  15546744 catgatttcctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaagaaccatacaaaaaacaactaaggaattgta 15546646  T
Q  101 tctaagttttctccttt 117  Q
     ||||||||||||||||    
T  15546645 cctaagttttctccttt 15546629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 18998175 - 18998291
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||        |||||||||||| |||||||||||||||||||||| ||| ||||||||    
T  18998175 catgatttcctcgaatccataattttctcaaagtttgttatatcaaaaaaaatatgtatttttaattaagaaccatacgaaaagcacctaaggaattgta 18998274  T
Q  101 tctaagttttctccttt 117  Q
     |||| |||||| ||||    
T  18998275 gctaaattttctacttt 18998291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 20501818 - 20501706
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||       ||||||||||||||||||||||||||||||| ||| ||| ||||||||    
T  20501818 catgatttcttcaaatccataattttctcgaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaaacacctaaggaattgta 20501720  T
Q  101 tctaagttttctcc 114  Q
     |||||||||||||    
T  20501719 actaagttttctcc 20501706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 4238966 - 4238852
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnn-tatgtatttttagttaagaaccatacgaaaagcacataaagaattgt 99  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||        |||||||||||| || |||||||||| ||||||||||||||||||||    
T  4238966 catgattttctcaaatccttaattttctcaaagtttgttatatccaaaaaaaatatgtatttttaattgagaaccatacaaaaagcacataaagaattgt 4238867  T
Q  100 atctaagttttctcc 114  Q
    |||||| ||||||||    
T  4238866 atctaaattttctcc 4238852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 3369097 - 3368985
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||| |||||||||||||||||||||||||| |       ||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  3369097 catgatttcctcaaattcataattttctcaaagtttgttatattcaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgta 3368999  T
Q  101 tctaagttttctcc 114  Q
       |||||||||||    
T  3368998 ctcaagttttctcc 3368985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 29609111 - 29609000
Alignment:
Q  3 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatc 102  Q
    ||||||||| ||||||||||||||||||||||||||||| |||        |||||||||||||||||||||| ||||||||||| |||||||||||| |    
T  29609111 tgatttccttaaatccataattttctcaaagtttgttatctccaaaaaag-atgtatttttagttaagaaccacacgaaaagcacttaaagaattgtacc 29609013  T
Q  103 taagttttctcct 115  Q
    |||||||| ||||    
T  29609012 taagttttgtcct 29609000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 7808721 - 7808610
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||       ||||||||||||||||| ||||| ||||||| ||| ||| ||||||||    
T  7808721 catgatttcctcaaatctataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaaaaaccaaacgaaaaacacctaaggaattgta 7808623  T
Q  101 tctaagttttctc 113  Q
     ||||||||||||    
T  7808622 cctaagttttctc 7808610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 14393676 - 14393575
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatcc--nnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattg 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||| |||||||||||||| ||| ||||||    
T  14393676 catgatttcctcaaatccataattttctcaaagtttgttatatccaaaaagaaatatgtatttttagttaagaatcatacgaaaagcacctaaggaattg 14393577  T
Q  99 ta 100  Q
    ||    
T  14393576 ta 14393575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 13172636 - 13172748
Alignment:
Q  5 atttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaa-ttgtatct 103  Q
    |||||||||||||||||||||||||||||||||||||||||       |||||||||||| |||||||||||||||||| ||| ||| ||| |||||  |    
T  13172636 atttcctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttacttaagaaccatacgaaaaacacttaaggaatttgtactt 13172734  T
Q  104 aagttttctccttt 117  Q
    |||||||| |||||    
T  13172735 aagttttcaccttt 13172748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 7808722 - 7808779
Alignment:
Q  56 gtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 113  Q
    |||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||    
T  7808722 gtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctc 7808779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 115
Target Start/End: Complemental strand, 11687200 - 11687142
Alignment:
Q  57 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 115  Q
    ||||||||||||||||||||||||||||||  ||| |||||||| ||||||||||||||    
T  11687200 tatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcct 11687142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 21379994 - 21379940
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 115  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||    
T  21379994 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcct 21379940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 61 - 118
Target Start/End: Original strand, 15546750 - 15546807
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttta 118  Q
    |||| |||||||||||||||||||||| ||| |||||||| |||||||||||||||||    
T  15546750 tttaattaagaaccatacgaaaagcacctaaggaattgtacctaagttttctccttta 15546807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 8091180 - 8091235
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 116  Q
    ||||||||||||||||||||||||||| |||  ||||||| |||||||||||||||    
T  8091180 tttagttaagaaccatacgaaaagcacctaagcaattgtacctaagttttctcctt 8091235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 6433743 - 6433687
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 117  Q
    ||||||||||||||||||||||||||| |||  |||| || ||||||||||||||||    
T  6433743 tttagttaagaaccatacgaaaagcacctaagaaattatacctaagttttctccttt 6433687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 116
Target Start/End: Original strand, 4179136 - 4179198
Alignment:
Q  53 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 116  Q
    |||||| |||||||||||||||||||||||| ||  |||||||||||| ||||||||| |||||    
T  4179136 tatgtagttttagttaagaaccatacgaaaaacatttaaagaattgta-ctaagttttatcctt 4179198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 13172627 - 13172572
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 116  Q
    ||||||||||||||||||||||| ||  || ||||||||| |||||||||||||||    
T  13172627 tttagttaagaaccatacgaaaaacatctagagaattgtacctaagttttctcctt 13172572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 114
Target Start/End: Complemental strand, 17367115 - 17367064
Alignment:
Q  63 tagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 114  Q
    |||||||||| ||||||||||| |||||| |||||||| |||||||||||||    
T  17367115 tagttaagaatcatacgaaaagaacataaggaattgtacctaagttttctcc 17367064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 31764388 - 31764492
Alignment:
Q  5 atttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatcta 104  Q
    |||| ||||||| |||||||||||||||||||||| |||||       ||||||| ||||||||||||| |||||||||| |  |||  ||||||| |||    
T  31764388 attttctcaaattcataattttctcaaagtttgttgtatcc-aaaaaatatgtatctttagttaagaactatacgaaaagtatctaagaaattgtaccta 31764486  T
Q  105 agtttt 110  Q
    ||||||    
T  31764487 agtttt 31764492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 885503 - 885557
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 115  Q
    |||||||||||| |||| ||||||||| ||| |||||||| ||||||||||||||    
T  885503 tttagttaagaatcataggaaaagcacctaaggaattgtacctaagttttctcct 885557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 4890533 - 4890479
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 115  Q
    ||||||||||||||||||||||| ||| |||  ||||||| ||||||||||||||    
T  4890533 tttagttaagaaccatacgaaaaacacctaagaaattgtacctaagttttctcct 4890479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 14393682 - 14393736
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 115  Q
    |||||||||||||||||| |||||||| ||| ||||| || ||||||||||||||    
T  14393682 tttagttaagaaccatacaaaaagcacctaaggaattatacctaagttttctcct 14393736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 110
Target Start/End: Original strand, 20501819 - 20501872
Alignment:
Q  56 gtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagtttt 110  Q
    |||||||||||||||||||||||||||||||| |||  ||||||| |||||||||    
T  20501819 gtatttttagttaagaaccatacgaaaagcacctaagaaattgta-ctaagtttt 20501872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 17367117 - 17367158
Alignment:
Q  2 atgatttcctcaaatccataattttctcaaagtttgttatat 43  Q
    |||||||| |||||| ||||||||||||||||||||||||||    
T  17367117 atgatttcatcaaattcataattttctcaaagtttgttatat 17367158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 110
Target Start/End: Complemental strand, 4076693 - 4076637
Alignment:
Q  53 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagtttt 110  Q
    |||||| ||||| |||||||||||||||||| ||  |||||||||||| |||||||||    
T  4076693 tatgtagttttaattaagaaccatacgaaaaacatttaaagaattgta-ctaagtttt 4076637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 109
Target Start/End: Original strand, 4238972 - 4239020
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttt 109  Q
    |||| ||||||||||||| ||||||||| || |||||||| ||||||||    
T  4238972 tttaattaagaaccatacaaaaagcacagaaggaattgtacctaagttt 4239020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 1e-34; HSPs: 76)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 4072332 - 4072447
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||| ||| ||||||||    
T  4072332 catgatttcctcgaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatacgaaaaacacctaaggaattgta 4072431  T
Q  101 tctaagttttctcctt 116  Q
     |||||||||||||||    
T  4072432 cctaagttttctcctt 4072447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 25446362 - 25446250
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  25446362 catgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatacgaaaagcac-taaggaattgta 25446264  T
Q  101 tctaagttttctcct 115  Q
     ||||||||||||||    
T  25446263 -ctaagttttctcct 25446250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 21969216 - 21969329
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  21969216 catgatttccttaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgta 21969314  T
Q  101 tctaagttttctcct 115  Q
     ||||||||||||||    
T  21969315 cctaagttttctcct 21969329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 21991652 - 21991765
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  21991652 catgatttccttaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgta 21991750  T
Q  101 tctaagttttctcct 115  Q
     ||||||||||||||    
T  21991751 cctaagttttctcct 21991765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 36822819 - 36822931
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||| |||| |||||||    
T  36822819 catgatttcctcagatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacctaaaaaattgta 36822917  T
Q  101 tctaagttttctcc 114  Q
     |||||||||||||    
T  36822918 cctaagttttctcc 36822931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 10441317 - 10441432
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||| ||| |||||||| ||| ||||||||    
T  10441317 catgatttcctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaagaaccgtaccaaaagcacctaaggaattgta 10441415  T
Q  101 tctaagttttctccttt 117  Q
     ||||||||||||||||    
T  10441416 cctaagttttctccttt 10441432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 36657492 - 36657606
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||  ||| ||||||||    
T  36657492 catgatttcctcaaatccataattttctcaaagtttgttatatc-aaaaaaatatgtatttttagttaagaaccatacgaaaagcatctaaggaattgta 36657590  T
Q  101 tctaagttttctcctt 116  Q
     |||||||||||||||    
T  36657591 cctaagttttctcctt 36657606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 45487911 - 45487797
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||       ||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  45487911 catgatttcctcaaattcataattttctcaatgtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgta 45487813  T
Q  101 tctaagttttctcctt 116  Q
     |||||||||||||||    
T  45487812 cctaagttttctcctt 45487797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 8831853 - 8831744
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||       ||||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  8831853 catgatttcttcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagtttagaaccatacgaaaagcacctaaggaattgta 8831754  T
Q  101 tctaagtttt 110  Q
     |||||||||    
T  8831753 cctaagtttt 8831744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 55340352 - 55340465
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||| |||||  || ||| ||||||||    
T  55340352 catgattttctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatatgaaaaatacctaaggaattgta 55340451  T
Q  101 tctaagttttctcc 114  Q
    ||||||||||||||    
T  55340452 tctaagttttctcc 55340465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 10254681 - 10254569
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||       ||||||||||||||||||||||||| ||||||||| ||| ||||||||    
T  10254681 catgattttctcaaatccataattttttcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatatgaaaagcacctaaggaattgta 10254582  T
Q  101 tctaagttttctc 113  Q
     ||||||||||||    
T  10254581 cctaagttttctc 10254569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 12838189 - 12838073
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||| |||||||| ||| ||||||||    
T  12838189 catgatttcctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaagaaccatacaaaaagcacctaaggaattgta 12838091  T
Q  101 tctaagttttctccttta 118  Q
      |||||||||| |||||    
T  12838090 cataagttttcttcttta 12838073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 12789718 - 12789603
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||       ||||||||||||||||||||||||||||||| ||| ||| ||||||||    
T  12789718 catgatttcctcaaattcataattttttcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaaacacctaaggaattgta 12789620  T
Q  101 tctaagttttctccttt 117  Q
     ||||||||||||||||    
T  12789619 cctaagttttctccttt 12789603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 7 - 115
Target Start/End: Original strand, 36329245 - 36329352
Alignment:
Q  7 ttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaag 106  Q
    |||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||| |||||||||||| |||      
T  36329245 ttcctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacctaaagaattgtagctacc 36329343  T
Q  107 ttttctcct 115  Q
    |||||||||    
T  36329344 ttttctcct 36329352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 43639140 - 43639251
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||       ||| |||||||||||||||| |||||||||||||| ||| ||||||||    
T  43639140 catgatttcttcaaatccataattttctcaaagtttgttatatccaaaaaaatatatatttttagttaagaatcatacgaaaagcacctaaggaattgta 43639239  T
Q  101 tctaagttttct 112  Q
     |||||||||||    
T  43639240 cctaagttttct 43639251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 3970550 - 3970664
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||| || |||  |||||||    
T  3970550 catgatttccttaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagtacctaagaaattgta 3970648  T
Q  101 tctaagttttctcctt 116  Q
     |||||||||||||||    
T  3970649 cctaagttttctcctt 3970664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 25488400 - 25488513
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||| |||||||| ||| ||||||||    
T  25488400 catgatttcttcatatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacaaaaagcacctaaggaattgta 25488498  T
Q  101 tctaagttttctcct 115  Q
     ||||||||||||||    
T  25488499 cctaagttttctcct 25488513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 25561123 - 25561010
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||| |||||||| ||| ||||||||    
T  25561123 catgatttcttcatatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacaaaaagcacctaaggaattgta 25561025  T
Q  101 tctaagttttctcct 115  Q
     ||||||||||||||    
T  25561024 cctaagttttctcct 25561010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 32237453 - 32237566
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||| |||| |||||||||||||||||||||||||||||||       |||||||||||| |||||||||||||||||||||| ||| ||||||||    
T  32237453 catgattttctcagatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttaattaagaaccatacgaaaagcacctaaggaattgta 32237551  T
Q  101 tctaagttttctcct 115  Q
     ||||||||||||||    
T  32237552 cctaagttttctcct 32237566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 5 - 113
Target Start/End: Complemental strand, 10117624 - 10117516
Alignment:
Q  5 atttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatcta 104  Q
    |||| ||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||| ||||||||| ||| ||| |||| |||    
T  10117624 attttctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatatgaaaagcacctaaggaactgtaccta 10117525  T
Q  105 agttttctc 113  Q
    |||||||||    
T  10117524 agttttctc 10117516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 26906565 - 26906453
Alignment:
Q  2 atgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtat 101  Q
    ||||||||||||||| ||||||||||||||||||||||||||||       ||| |||||||||||||||||||||||||||| || ||| ||||||||     
T  26906565 atgatttcctcaaattcataattttctcaaagtttgttatatccaaaaaa-tatatatttttagttaagaaccatacgaaaaggacctaaggaattgtac 26906467  T
Q  102 ctaagttttctcct 115  Q
    ||||||||||||||    
T  26906466 ctaagttttctcct 26906453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 10017226 - 10017115
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||       ||||||||||||||||||||||||| ||||||||| ||| ||||||||    
T  10017226 catgattttctcaaatccataattttttcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatatgaaaagcacctaaggaattgta 10017128  T
Q  101 tctaagttttctc 113  Q
     ||||||||||||    
T  10017127 cctaagttttctc 10017115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 22101276 - 22101193
Alignment:
Q  2 atgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagc 85  Q
    ||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  22101276 atgatttcctcaaatccataattttctcaaagtttgttatatccaacaaaatatgtatttttagttaagaaccatacgaaaagc 22101193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 36278816 - 36278927
Alignment:
Q  2 atgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtat 101  Q
    ||||||||||||||| ||||||||||||||||||||||||||||       ||| |||||||||||||||||||||||||||| || ||| ||||||||     
T  36278816 atgatttcctcaaattcataattttctcaaagtttgttatatccaaaaaa-tatatatttttagttaagaaccatacgaaaaggacctaaggaattgtac 36278914  T
Q  102 ctaagttttctcc 114  Q
    |||||||||||||    
T  36278915 ctaagttttctcc 36278927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 5530004 - 5529886
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||| | ||||| ||||||||||||||||||| |||||||       ||||||||||||||||||||||||||||||||||| |||  |||||||    
T  5530004 catgatttctttaaatctataattttctcaaagtttgatatatccaaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaagaaattgta 5529905  T
Q  101 tctaagttttctcctttag 119  Q
     |||||||||||| |||||    
T  5529904 cctaagttttctcgtttag 5529886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 39850403 - 39850517
Alignment:
Q  1 catgatttcctcaaatccataattttctca-aagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgt 99  Q
    |||||||||||||||||||||||||||||| |||||||||||||||       ||| |||||||||||||||| |||||||||||||| ||| |||||||    
T  39850403 catgatttcctcaaatccataattttctcacaagtttgttatatccaaaaaa-tatatatttttagttaagaatcatacgaaaagcacctaaggaattgt 39850501  T
Q  100 atctaagttttctcct 115  Q
    | ||||||||||||||    
T  39850502 acctaagttttctcct 39850517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 45712962 - 45713071
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||       ||||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  45712962 catgatttcctcaaagccataattttatcaaagtttgttatatccaaaaaa-tatgtatttttagtttagaaccatacgaaaagcacctaaggaattgta 45713060  T
Q  101 tctaagttttc 111  Q
     ||||||||||    
T  45713061 cctaagttttc 45713071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 13078222 - 13078334
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||       |||||||||||||||||||| ||||||||||| || |||  |||||||    
T  13078222 catgatttccttaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaagaatcatacgaaaagtacctaagaaattgta 13078320  T
Q  101 tctaagttttctcc 114  Q
     |||||||||||||    
T  13078321 cctaagttttctcc 13078334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 22176220 - 22176137
Alignment:
Q  2 atgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagc 85  Q
    ||||||||||||||||||||||||||||||||||||| ||||||       |||||||||||||||||||||||||||||||||    
T  22176220 atgatttcctcaaatccataattttctcaaagtttgtaatatccaacaaaatatgtatttttagttaagaaccatacgaaaagc 22176137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 43150591 - 43150480
Alignment:
Q  2 atgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtat 101  Q
    ||||||||||||||| ||||||||||||||||||||||||||||       ||||||||||||||||| ||||||||||||||||| | | |||||| |     
T  43150591 atgatttcctcaaattcataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaaaaaccatacgaaaagcacctgaggaattgcac 43150493  T
Q  102 ctaagttttctcc 114  Q
    |||||||||||||    
T  43150492 ctaagttttctcc 43150480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 157031 - 157144
Alignment:
Q  5 atttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatcta 104  Q
    |||||||||||||||||||||||||||||||||||||||         ||||||||||||| ||||||| |||| |||||||| |||  |||||||| ||    
T  157031 atttcctcaaatccataattttctcaaagtttgttatataaaaaaaaatatgtatttttagctaagaactataccaaaagcacctaagaaattgtatata 157130  T
Q  105 agttttctccttta 118  Q
    ||||||||||||||    
T  157131 agttttctccttta 157144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 404157 - 404043
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||| || |||||||||||||||||||||||||||       ||| ||||||||||||| || |||||||||||||| |||  |||||||    
T  404157 catgatttcctcaagtctataattttctcaaagtttgttatatccaaaaaaatatttatttttagttaaaaatcatacgaaaagcacctaagaaattgta 404058  T
Q  101 tctaagttttctcct 115  Q
      |||||||||||||    
T  404057 cgtaagttttctcct 404043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 35368607 - 35368546
Alignment:
Q  56 gtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 117  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  35368607 gtatttttagttaagaaccatacgaaaagcacataaggaattgtacctaagttttctccttt 35368546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 115
Target Start/End: Original strand, 38125250 - 38125351
Alignment:
Q  13 aaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttct 112  Q
    |||||||||||||||| |||||||||||||| |       ||||||||||||||||||||||||||||||| ||| ||| |||||||| |||||||||||    
T  38125250 aaatccataattttcttaaagtttgttatatacaaaaaa-tatgtatttttagttaagaaccatacgaaaaacacctaatgaattgtacctaagttttct 38125348  T
Q  113 cct 115  Q
    |||    
T  38125349 cct 38125351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 1476610 - 1476725
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||||| |||||||||||| |||||||||||||||| ||        | ||||||||||||||||||||||| ||||||||| ||| ||||||||    
T  1476610 catgatttccttaaatccataattctctcaaagtttgttatctctaaaaaaat-tgtatttttagttaagaaccatatgaaaagcacctaaggaattgta 1476708  T
Q  101 tctaagttttctccttt 117  Q
     ||||||||| ||||||    
T  1476709 cctaagttttatccttt 1476725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 13724046 - 13724162
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||       ||||||||||||||||| ||  ||||||||| ||  ||| ||||||||    
T  13724046 catgatttcttcaaattcataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaaaaattatacgaaaaacatctaaggaattgta 13724145  T
Q  101 tctaagttttctccttt 117  Q
     ||||| ||||||||||    
T  13724146 cctaagatttctccttt 13724162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 50099542 - 50099446
Alignment:
Q  5 atttcctcaaatccataattttctcaaagtttgttatatcc-nnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||| ||||||||||||||||||||||||||||        |||||||||||| |||| ||||||||||||||||| ||| ||||||||    
T  50099542 atttcctcaaattcataattttctcaaagtttgttatatccaaaaaaaatatgtatttttaattaaaaaccatacgaaaagcacctaacgaattgta 50099446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 114
Target Start/End: Complemental strand, 32362922 - 32362861
Alignment:
Q  53 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 114  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||  ||||||||||||    
T  32362922 tatgtatttttagttaagaaccatacgaaaaacacctaaagaattgtagttaagttttctcc 32362861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 37506185 - 37506298
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||| || |||| |||||||||||||||||||||||| |||        |||||||||||||||||||||| ||||||| ||| ||||||||||||    
T  37506185 catgattttcttaaattcataattttctcaaagtttgttatctccaaaaaaa-atgtatttttagttaagaaccacacgaaaaacacctaaagaattgta 37506283  T
Q  101 tctaagttttctcct 115  Q
      |||||||| ||||    
T  37506284 cataagttttgtcct 37506298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 39850402 - 39850337
Alignment:
Q  56 gtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctttagat 121  Q
    |||||||||||||||||||||||||||| ||| ||| |||| ||| ||||||||||||||||||||    
T  39850402 gtatttttagttaagaaccatacgaaaaacacctaaggaatagtacctaagttttctcctttagat 39850337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 21969210 - 21969154
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 117  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||    
T  21969210 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctccttt 21969154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 21991646 - 21991590
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 117  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||    
T  21991646 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctccttt 21991590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 26976902 - 26977009
Alignment:
Q  2 atgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtat 101  Q
    ||||||| ||||||||||||||||||||||||||| || ||||         || ||||||||||||| ||||||||||||| ||| ||||||||||||     
T  26976902 atgattttctcaaatccataattttctcaaagtttattgtatcgtaaaaag-atatatttttagttaaaaaccatacgaaaaacacctaaagaattgtac 26977000  T
Q  102 ctaagtttt 110  Q
    |||||||||    
T  26977001 ctaagtttt 26977009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 56 - 115
Target Start/End: Complemental strand, 36822818 - 36822759
Alignment:
Q  56 gtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 115  Q
    |||||||||||||||||||||||||||||||  ||| |||||||| ||||||||||||||    
T  36822818 gtatttttagttaagaaccatacgaaaagcagctaaggaattgtacctaagttttctcct 36822759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 46664284 - 46664173
Alignment:
Q  5 atttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatcta 104  Q
    |||||||||||| ||||||||||||||||||||||||||         ||||||||||||||||||||| |||||||||  || |||  ||||||| |||    
T  46664284 atttcctcaaattcataattttctcaaagtttgttatat-taaaaaaatatgtatttttagttaagaactatacgaaaaatacctaagaaattgtaccta 46664186  T
Q  105 agttttctccttt 117  Q
    | |||||||||||    
T  46664185 aattttctccttt 46664173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 50099552 - 50099607
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 116  Q
    ||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  50099552 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcctt 50099607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 115
Target Start/End: Complemental strand, 36657490 - 36657432
Alignment:
Q  57 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 115  Q
    ||||||||||||||||||||||||||||||  ||| |||||||| ||||||||||||||    
T  36657490 tatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcct 36657432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 45487917 - 45487971
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 115  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||    
T  45487917 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcct 45487971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 22101283 - 22101336
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 114  Q
    ||||||||||||||||||||||||| ||||| |||||||| |||||||||||||    
T  22101283 tttagttaagaaccatacgaaaagctcataaggaattgtacctaagttttctcc 22101336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 22176227 - 22176280
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 114  Q
    |||||||||||||||||| |||||||||||| |||||||| |||||||||||||    
T  22176227 tttagttaagaaccatacaaaaagcacataaggaattgtacctaagttttctcc 22176280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 44611440 - 44611545
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||| |||||| |||||||||||||||||||||||||| |       ||| ||||||||||||| |||||||| |||| ||| ||| ||||||||    
T  44611440 catgatttcttcaaattcataattttctcaaagtttgttatat-caaaaaaatatatatttttagttaaaaaccatacaaaaaacacctaaggaattgta 44611538  T
Q  101 tctaagt 107  Q
     ||||||    
T  44611539 cctaagt 44611545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 8831859 - 8831911
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 113  Q
    ||||||||||||||||||||||||||| |||| ||||||| ||||||||||||    
T  8831859 tttagttaagaaccatacgaaaagcacctaaaaaattgtacctaagttttctc 8831911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 10117629 - 10117685
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 117  Q
    ||||||||||||||||||||||||||| ||| |||||||| |||| |||||||||||    
T  10117629 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaaattttctccttt 10117685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 35368845 - 35368801
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatcc 45  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  35368845 catgattttctcaaatccataattttctcaaagtttgttatatcc 35368801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 25446368 - 25446422
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 116  Q
    ||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  25446368 tttagttaagaaccatacgaaaagcacctaaggaattgta-ctaagttttctcctt 25446422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 3970544 - 3970490
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 115  Q
    ||||||||||||||||||||||||||| ||| |||||| | ||||||||||||||    
T  3970544 tttagttaagaaccatacgaaaagcacctaaggaattgcacctaagttttctcct 3970490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 4072326 - 4072272
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 115  Q
    ||||||||||||||||||||||||||| |||  ||||||| ||||||||||||||    
T  4072326 tttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctcct 4072272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 26977801 - 26977684
Alignment:
Q  2 atgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacga-----aaagcacataaagaat 96  Q
    ||||||||||||||||||||||||||||||||||| || ||| |        |||||||||||||||| ||||||||||     ||||||| ||||||||    
T  26977801 atgatttcctcaaatccataattttctcaaagtttattgtat-cataaaaagatgtatttttagttaaaaaccatacgaaaattaaagcacctaaagaat 26977703  T
Q  97 tgtatctaagttttctcctt 116  Q
    |||| ||||||||| |||||    
T  26977702 tgta-ctaagttttatcctt 26977684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 13078216 - 13078163
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 114  Q
    ||||||||||||||||||||||||||| ||| |||||| | |||||||||||||    
T  13078216 tttagttaagaaccatacgaaaagcacctaaggaattgcacctaagttttctcc 13078163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 10254687 - 10254739
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 113  Q
    ||||||||||||||||||||||||||| ||| |||||||| |||| |||||||    
T  10254687 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaaattttctc 10254739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 10441315 - 10441255
Alignment:
Q  57 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 117  Q
    |||||||||||||||| ||||| |||||||| ||| ||||||||  |||||||||||||||    
T  10441315 tatttttagttaagaatcataccaaaagcacctaaggaattgtacttaagttttctccttt 10441255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 46679369 - 46679329
Alignment:
Q  5 atttcctcaaatccataattttctcaaagtttgttatatcc 45  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  46679369 atttcctcaaatccataattttctcaaagtttgttaaatcc 46679329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 112
Target Start/End: Complemental strand, 32237447 - 32237396
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttct 112  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||||||    
T  32237447 tttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttct 32237396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 26906572 - 26906626
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 115  Q
    |||||||||||||||||||||||| |  ||| |||||||| ||||||||||||||    
T  26906572 tttagttaagaaccatacgaaaagtatctaaggaattgtacctaagttttctcct 26906626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 35368851 - 35368905
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 115  Q
    ||||||||| ||||||||||||| |||||||  ||||||| ||||||||||||||    
T  35368851 tttagttaaaaaccatacgaaaaacacataagaaattgtacctaagttttctcct 35368905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 36278809 - 36278755
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 115  Q
    |||||||||||||||||||||||| |  ||| |||||||| ||||||||||||||    
T  36278809 tttagttaagaaccatacgaaaagtatctaaggaattgtacctaagttttctcct 36278755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 37536978 - 37536941
Alignment:
Q  5 atttcctcaaatccataattttctcaaagtttgttata 42  Q
    |||||||| |||||||||||||||||||||||||||||    
T  37536978 atttcctctaatccataattttctcaaagtttgttata 37536941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 12838195 - 12838251
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 117  Q
    ||||||||| ||||||||||||| ||| ||||||||||||  |||||||||| ||||    
T  12838195 tttagttaaaaaccatacgaaaaacacctaaagaattgtacataagttttcttcttt 12838251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 25561129 - 25561185
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 117  Q
    ||||||||||||| ||||||||||||| ||| ||||||||  |||| ||||||||||    
T  25561129 tttagttaagaactatacgaaaagcacctaaggaattgtacttaagatttctccttt 25561185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 26976895 - 26976839
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 117  Q
    |||| |||||||| ||||||||||||| |||  ||||||| ||||||||||||||||    
T  26976895 tttaattaagaactatacgaaaagcacctaagaaattgtacctaagttttctccttt 26976839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 112
Target Start/End: Original strand, 404163 - 404213
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttct 112  Q
    ||||||||||||||||||| ||||||  |||||||||||| |||||||||||    
T  404163 tttagttaagaaccatacggaaagcatctaaagaattgta-ctaagttttct 404213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 113
Target Start/End: Original strand, 10017232 - 10017279
Alignment:
Q  66 ttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 113  Q
    |||||||||||||||||||||| ||| |||||||| |||| |||||||    
T  10017232 ttaagaaccatacgaaaagcacctaaggaattgtacctaaattttctc 10017279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 43639130 - 43639079
Alignment:
Q  65 gttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 116  Q
    |||||||| |||||||||||||| ||| ||||| || |||||||||||||||    
T  43639130 gttaagaatcatacgaaaagcacctaaggaattataactaagttttctcctt 43639079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 110
Target Start/End: Original strand, 5530005 - 5530059
Alignment:
Q  56 gtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagtttt 110  Q
    |||||||||||||| ||||||||||||||||| |||  ||||||| |||| ||||    
T  5530005 gtatttttagttaataaccatacgaaaagcacttaagaaattgtacctaaatttt 5530059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 110
Target Start/End: Complemental strand, 297590 - 297541
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagtttt 110  Q
    ||||| |||||||||||||||||||||  || |||||||| |||||||||    
T  297590 tttagctaagaaccatacgaaaagcaccaaaggaattgtacctaagtttt 297541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 25488394 - 25488341
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 114  Q
    ||||||||||||| ||||||||||||| ||| ||||||||  |||| |||||||    
T  25488394 tttagttaagaactatacgaaaagcacctaaggaattgtacttaagatttctcc 25488341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 45946 - 45831
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||| |||||||| ||| ||||||||    
T  45946 catgattttctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacaaaaagcacctaaggaattgta 45848  T
Q  101 tctaagttttctccttt 117  Q
     ||||||||||||||||    
T  45847 cctaagttttctccttt 45831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 45952 - 46005
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 114  Q
    ||||||||||||||||| ||||||||| ||| |||||||| |||||||||||||    
T  45952 tttagttaagaaccataagaaaagcacctaaggaattgtacctaagttttctcc 46005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 5e-31; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 15882313 - 15882196
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||| |||||||||||||| ||||||||||| |||||||||       |||||||||||||||||||||||||| |||||||| ||| ||||||||    
T  15882313 catgattttctcaaatccataatattctcaaagttagttatatccaaaaaaatatgtatttttagttaagaaccatacaaaaagcacctaaggaattgta 15882214  T
Q  101 tctaagttttctccttta 118  Q
     |||||||||||||||||    
T  15882213 cctaagttttctccttta 15882196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 29781022 - 29781132
Alignment:
Q  5 atttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatcta 104  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||  ||| |||||| | |||    
T  29781022 atttcctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcatctaaggaattggaccta 29781120  T
Q  105 agttttctcctt 116  Q
    ||||||||||||    
T  29781121 agttttctcctt 29781132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 8210435 - 8210322
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||       ||| ||| |||||||||||| |||||||||||||| ||| ||||||||    
T  8210435 catgatttcctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatatatatttagttaagaatcatacgaaaagcacctaaggaattgta 8210337  T
Q  101 tctaagttttctcct 115  Q
     ||||||||||||||    
T  8210336 cctaagttttctcct 8210322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 23940863 - 23940976
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||         ||||||||||||||||| ||||||||||||||||| ||| ||||||||    
T  23940863 catgatttcctcaaatccgtaattttctcaaagtttgttatatttaaaaaaatatgtatttttagttaaaaaccatacgaaaagcacctaaggaattgta 23940962  T
Q  101 tctaagttttctcc 114  Q
     |||||||||||||    
T  23940963 actaagttttctcc 23940976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 12234578 - 12234463
Alignment:
Q  2 atgatttcctcaaatccataattttctcaaagttt-gttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||       |||||||||||||||||||||||||||||||||||  |||||||| ||    
T  12234578 atgatttcctcaaattcataattttctcaaagttttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacccaaagaattata 12234480  T
Q  101 tctaagttttctccttt 117  Q
     ||||||||||||||||    
T  12234479 cctaagttttctccttt 12234463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 17426687 - 17426802
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnn-tatgtatttttagttaagaaccatacgaaaagcacataaagaattgt 99  Q
    ||||||||||||||||| |||||||||||||||||||||||||||        |||  |||||||||||||||||||||||||||||| |||| ||||||    
T  17426687 catgatttcctcaaatctataattttctcaaagtttgttatatccaaaaaaaatatacatttttagttaagaaccatacgaaaagcacctaaaaaattgt 17426786  T
Q  100 atctaagttttctcct 115  Q
    | ||||||||||||||    
T  17426787 acctaagttttctcct 17426802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 38629586 - 38629473
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||       ||||||||||||||||||||||||||||||||||  ||||||||||||    
T  38629586 catgatttcctcaaattcataattttctcaaagtttattatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcatttaaagaattgta 38629488  T
Q  101 tctaagttttctcct 115  Q
      ||| |||||||||    
T  38629487 cttaaattttctcct 38629473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 33100708 - 33100815
Alignment:
Q  5 atttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatcta 104  Q
    ||||||||||||||||||||||||||||||||||||||||        ||||| |||||||||||||||| ||||||||||||||||  ||||||| |||    
T  33100708 atttcctcaaatccataattttctcaaagtttgttatatc-aaaaaaatatgtttttttagttaagaaccgtacgaaaagcacataagaaattgtaccta 33100806  T
Q  105 agttttctc 113  Q
    |||||||||    
T  33100807 agttttctc 33100815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 37114350 - 37114239
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||| || |||||||||||||||||||||||| ||||||||       |||||||||||| |||||||||||||||||||||| ||| ||||||||    
T  37114350 catgattttcttaaatccataattttctcaaagtttattatatccaaaaaa-tatgtatttttaattaagaaccatacgaaaagcacctaaggaattgta 37114252  T
Q  101 tctaagttttctc 113  Q
     ||||||||||||    
T  37114251 cctaagttttctc 37114239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 38520130 - 38520015
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||       ||| ||||||||||||||||||||||||||||||  ||| ||||| ||    
T  38520130 catgatttcctcaaattcataattttctcaaagtttgttatatcc-aaaaaatatatatttttagttaagaaccatacgaaaagcaactaaggaattata 38520032  T
Q  101 tctaagttttctccttt 117  Q
     |||| |||||||||||    
T  38520031 cctaaattttctccttt 38520015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 40891125 - 40891044
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaa 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||| ||||||||    
T  40891125 catgatttcctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaagaaccgtacgaaaa 40891044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 24211341 - 24211449
Alignment:
Q  5 atttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatcta 104  Q
    ||||||| || ||||||||||||||| |||||||||||||        ||||||||| || |||||||||||||||||||||| ||| |||||||| |||    
T  24211341 atttccttaattccataattttctcatagtttgttatatc-taaaaaatatgtatttctatttaagaaccatacgaaaagcacctaaggaattgtaccta 24211439  T
Q  105 agttttctcc 114  Q
    ||||||||||    
T  24211440 agttttctcc 24211449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 61 - 118
Target Start/End: Original strand, 15882319 - 15882376
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttta 118  Q
    ||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||    
T  15882319 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctccttta 15882376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 24211331 - 24211275
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 117  Q
    |||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  24211331 tttaattaagaaccatacgaaaagcacctaaagaattgtacctaagttttctccttt 24211275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 17426681 - 17426626
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 116  Q
    ||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  17426681 tttagttaagaaccatacgaaaagcacctaatgaattgtacctaagttttctcctt 17426626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 33100703 - 33100645
Alignment:
Q  56 gtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 114  Q
    |||||||||||||||||||||||||||||||| |||  ||||||| |||||||||||||    
T  33100703 gtatttttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctcc 33100645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 38405250 - 38405135
Alignment:
Q  2 atgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtat 101  Q
    ||||||| || |||| | ||||||||||||||||||||||||||        ||||||||||||||||||||||||| ||||| || || | |||||||     
T  38405250 atgattttcttaaattcgtaattttctcaaagtttgttatatccaaaaaaagatgtatttttagttaagaaccatacaaaaagtacttacataattgtac 38405151  T
Q  102 ctaagttttctccttt 117  Q
    |||| |||| ||||||    
T  38405150 ctaaattttgtccttt 38405135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 11828659 - 11828775
Alignment:
Q  5 atttcctcaaatccataattttctcaaagtttgttatatccnnnnnnn------tatgtatttttagttaagaaccatacgaaaagcacataaagaattg 98  Q
    |||||||||||||||| |||||||||||||||||||||||              ||||||||||||||||||||| ||| ||||||||  ||| ||||||    
T  11828659 atttcctcaaatccattattttctcaaagtttgttatatctaacaaaaaaaaaatatgtatttttagttaagaacgatatgaaaagcaagtaaggaattg 11828758  T
Q  99 tatctaagttttctcct 115  Q
    || ||||||||||||||    
T  11828759 tacctaagttttctcct 11828775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 35467288 - 35467344
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 117  Q
    ||||||||||||||||||||||||||||||| ||||||||  |||||||| ||||||    
T  35467288 tttagttaagaaccatacgaaaagcacataaggaattgtacgtaagttttttccttt 35467344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 112
Target Start/End: Original strand, 40891131 - 40891182
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttct 112  Q
    ||||||||||||||||||||||||||| ||| |||||||| |||||||||||    
T  40891131 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 40891182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 10778768 - 10778686
Alignment:
Q  2 atgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagc 85  Q
    ||||||||||||||| || ||| |||||||||||||||||| ||        ||||||||||||||||||||||||||||||||    
T  10778768 atgatttcctcaaattcacaatcttctcaaagtttgttatagccacaaaaa-atgtatttttagttaagaaccatacgaaaagc 10778686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 24741876 - 24741822
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 115  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||||||| ||||    
T  24741876 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttttcct 24741822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 24741882 - 24741980
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||||||| ||||||||| ||||| |||||| |         ||||||||||||||||||||||||||||| ||| | ||||||||||    
T  24741882 catgatttcctcaaatccatgattttctcagagtttattatatgcaacatagg-tgtatttttagttaagaaccatacgaaaatcacctcaagaattgta 24741980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 38629592 - 38629646
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 115  Q
    ||||||||||||||||||||||| ||| ||| |||||||| ||||||||||||||    
T  38629592 tttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttctcct 38629646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 4262036 - 4262077
Alignment:
Q  2 atgatttcctcaaatccataattttctcaaagtttgttatat 43  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  4262036 atgatttcctcaagtccataattttctcaaagtttgttatat 4262077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 115
Target Start/End: Complemental strand, 4035837 - 4035740
Alignment:
Q  17 ccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 115  Q
    |||| ||||||||||| ||||||||||||       ||| |||||||||||||| |||||||||||||||| | | ||| |||| ||||||||||||||    
T  4035837 ccatgattttctcaaaatttgttatatccaaaaaa-tatatatttttagttaagtaccatacgaaaagcacctgaggaactgtacctaagttttctcct 4035740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 35467231 - 35467167
Alignment:
Q  54 atgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttta 118  Q
    |||||||||||||||||||||| || ||||| |  |||||||||||| ||||||||| |||||||    
T  35467231 atgtatttttagttaagaaccacacaaaaagtatctaaagaattgtacctaagttttgtccttta 35467167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 100
Target Start/End: Complemental strand, 4262029 - 4261990
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  4262029 tttagttaagaaccatacgaaaagcacctaaagaattgta 4261990  T

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Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 38520136 - 38520191
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 116  Q
    ||||||||| || |||||||||||||| ||| |||||||| |||||||||||||||    
T  38520136 tttagttaaaaaacatacgaaaagcacttaaggaattgtacctaagttttctcctt 38520191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 110
Target Start/End: Complemental strand, 14834725 - 14834676
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagtttt 110  Q
    ||||||||||||||||||||||||||| ||| ||||||||  ||||||||    
T  14834725 tttagttaagaaccatacgaaaagcacgtaaggaattgtacgtaagtttt 14834676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 25264287 - 25264328
Alignment:
Q  2 atgatttcctcaaatccataattttctcaaagtttgttatat 43  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
T  25264287 atgatttcctcaaattcataattttcttaaagtttgttatat 25264328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 5356234 - 5356294
Alignment:
Q  53 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 113  Q
    |||||||||||| ||||||| |||||||||| ||| ||   ||||||||||||||||||||    
T  5356234 tatgtatttttaattaagaatcatacgaaaaacacctacgaaattgtatctaagttttctc 5356294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 12234585 - 12234640
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 116  Q
    ||||||||| ||||||||||||||||  |||  ||||||| |||||||||||||||    
T  12234585 tttagttaataaccatacgaaaagcatctaagaaattgtacctaagttttctcctt 12234640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 23940857 - 23940802
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 116  Q
    |||||||||||| |||||||||||||| |||  ||||||| | |||||||||||||    
T  23940857 tttagttaagaatcatacgaaaagcacttaagaaattgtaccgaagttttctcctt 23940802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 38515615 - 38515585
Alignment:
Q  2 atgatttcctcaaatccataattttctcaaa 32  Q
    |||||||||||||||||||||||||||||||    
T  38515615 atgatttcctcaaatccataattttctcaaa 38515585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 110
Target Start/End: Complemental strand, 29781012 - 29780963
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagtttt 110  Q
    ||||||||| ||||||||||||||||| ||| |||||||| |||| ||||    
T  29781012 tttagttaaaaaccatacgaaaagcacctaaggaattgtacctaaatttt 29780963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 42
Target Start/End: Original strand, 29869941 - 29869973
Alignment:
Q  10 ctcaaatccataattttctcaaagtttgttata 42  Q
    |||||||||| ||||||||||||||||||||||    
T  29869941 ctcaaatccacaattttctcaaagtttgttata 29869973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 36898266 - 36898322
Alignment:
Q  55 tgtatttttagttaagaaccatacg-aaaagcacataaagaattgtatctaagtttt 110  Q
    ||||||||||||||||||||||  | ||||||| |||||||||||||| ||| ||||    
T  36898266 tgtatttttagttaagaaccatttgaaaaagcatataaagaattgtatgtaaatttt 36898322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 62; Significance: 8e-27; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 51174 - 51060
Alignment:
Q  2 atgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtat 101  Q
    |||||||||| |||| ||||||||||||||||||||||||||||       ||| |||||||||||||||||||||||||||| || ||| ||||||||     
T  51174 atgatttccttaaattcataattttctcaaagtttgttatatccaaaaaa-tatatatttttagttaagaaccatacgaaaaggacctaaggaattgtac 51076  T
Q  102 ctaagttttctccttt 117  Q
    ||||||||||||||||    
T  51075 ctaagttttctccttt 51060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 120
Target Start/End: Original strand, 51181 - 51240
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctttaga 120  Q
    ||||||||||||||||| |||||| || ||| |||||||| |||||||||||||||||||    
T  51181 tttagttaagaaccatatgaaaagtacctaaggaattgtacctaagttttctcctttaga 51240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 7198 - 7085
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||       ||| |||||||||||||||| |||||||||| ||| ||| ||||||||    
T  7198 catgatttcctcaaatccataattttctcaaagtttgttatatcc-aaaatatatatatttttagttaagaatcatacgaaaaacacctaaggaattgta 7100  T
Q  101 tctaagttttctcct 115  Q
     |||| |||||||||    
T  7099 cctaaattttctcct 7085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 7204 - 7258
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 115  Q
    ||||||||||||||||||||||||||| ||| |||| ||| |||| |||||||||    
T  7204 tttagttaagaaccatacgaaaagcacctaaggaatcgtacctaaattttctcct 7258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 1998 - 2111
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||        || ||||||||||||||||||||||  |||||||| ||| ||||||||    
T  1998 catgatttcctcaaatccataattttcacaaagtttgttatatctaaaaaaatacgtatttttagttaagaaccatataaaaagcacctaaggaattgta 2097  T
Q  101 tctaagttttctcc 114  Q
     |||||||||||||    
T  2098 cctaagttttctcc 2111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 1992 - 1936
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 117  Q
    |||||||||||||||||| |||||||| |||| |||| || |||| |||||||||||    
T  1992 tttagttaagaaccatacaaaaagcacctaaacaattatacctaaattttctccttt 1936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653 (Bit Score: 59; Significance: 5e-25; HSPs: 2)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 3452 - 3567
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    ||||||||||||||||  |||||||| ||||||||||||||||||       |||||||||||| ||||||||||||||||||| || ||||||||||||    
T  3452 catgatttcctcaaatttataattttatcaaagtttgttatatccaaaaaa-tatgtatttttatttaagaaccatacgaaaagtacctaaagaattgta 3550  T
Q  101 tctaagttttctccttt 117  Q
     |||| |||||||||||    
T  3551 cctaaattttctccttt 3567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 3446 - 3393
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 114  Q
    |||| ||||||||||||| ||||||||  || |||||||| |||||||||||||    
T  3446 tttaattaagaaccatacaaaaagcaccaaatgaattgtacctaagttttctcc 3393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 48238 - 48124
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||       |||||||||||| |||| ||||||||||||||||| |||| |||| ||    
T  48238 catgattttctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttaattaaaaaccatacgaaaagcacctaaaaaattata 48140  T
Q  101 tctaagttttctcctt 116  Q
      |||||||| |||||    
T  48139 cgtaagttttgtcctt 48124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 48244 - 48296
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 113  Q
    ||||||||||||| ||||||||||||  ||| |||||||||||||||||||||    
T  48244 tttagttaagaactatacgaaaagcatctaaggaattgtatctaagttttctc 48296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 53 - 115
Target Start/End: Complemental strand, 5762 - 5700
Alignment:
Q  53 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 115  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||||||    
T  5762 tatgtatttttagttaagaaccatacgaaaagcacctaaagaattgtaccttagttttctcct 5700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 5823 - 5880
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataa--agaattgtatctaagttttctcctt 116  Q
    ||||||||||||||||||||||||||| |||  | ||||||| |||||||||||||||    
T  5823 tttagttaagaaccatacgaaaagcacctaaggaaaattgtacctaagttttctcctt 5880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 10227 - 10113
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 100  Q
    |||||||| |||| |||||||||||||||||||||||||||||||       ||| ||||||||||||||||||||||| ||| ||| ||| ||||| ||    
T  10227 catgattttctcacatccataattttctcaaagtttgttatatcc--aaaaatatatatttttagttaagaaccatacgcaaaacacctaaggaattata 10130  T
Q  101 tctaagttttctccttt 117  Q
     ||||||||||| ||||    
T  10129 cctaagttttctacttt 10113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 72346 - 72445
Alignment:
Q  17 ccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 116  Q
    |||||||||||||| ||||||||||||||       ||||||||||||||||| ||||||||||||||||| ||| |||||| | |||||||||||||||    
T  72346 ccataattttctcagagtttgttatatccaaaaaa-tatgtatttttagttaaaaaccatacgaaaagcacttaaggaattgca-ctaagttttctcctt 72443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 26464 - 26403
Alignment:
Q  55 tgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 116  Q
    ||||||||||||||| ||||||||||||||||| ||| |||||||| |||||||||||||||    
T  26464 tgtatttttagttaataaccatacgaaaagcacctaaggaattgtacctaagttttctcctt 26403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 116
Target Start/End: Complemental strand, 14540 - 14440
Alignment:
Q  15 atccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 114  Q
    |||||||||||||||||||| ||||||||||       |||||||||||||||||| |||||| ||||| ||| |||  ||||||| |||||||||||||    
T  14540 atccataattttctcaaagtctgttatatccaaataa-tatgtatttttagttaagtaccataggaaaaacacctaagaaattgtacctaagttttctcc 14442  T
Q  115 tt 116  Q
    ||    
T  14441 tt 14440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 14560 - 14612
Alignment:
Q  61 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 113  Q
    ||||||||||||| |||||||||||||  || |||||||| ||||||||||||    
T  14560 tttagttaagaacgatacgaaaagcacccaaggaattgtacctaagttttctc 14612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 94284 - 94240
Alignment:
Q  1 catgatttcctcaaatccataattttctcaaagtttgttatatcc 45  Q
    ||||||||  ||||||||| |||||||||| ||||||||||||||    
T  94284 catgattttatcaaatccaaaattttctcatagtttgttatatcc 94240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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