View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1274_low_81 (Length: 264)
Name: NF1274_low_81
Description: NF1274
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1274_low_81 |
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Alignment Details
Target: chr7 (Bit Score: 181; Significance: 7e-98; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 44 - 241
Target Start/End: Original strand, 31981179 - 31981380
Alignment:
| Q |
44 |
tatagctggagggtagaatggggaataaaaatgaaaaggaatagaagtacgtgacgtgagtgaaatgaagaatgaataggacaagaagaagtgggagcac |
143 |
Q |
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| T |
31981179 |
tatagctggagggtagaatggagaataaaaatgaaaaggaatagaagtacgtgacgtgagtgaaatgaagaatgaataggacaagaagaagtgggagcac |
31981278 |
T |
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| Q |
144 |
tca----cacactcaatagcatatagtacaacaacaaacacacacactctccctaccctaatggctaatactacgttgcatttgcatatttgtgcctctc |
239 |
Q |
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| T |
31981279 |
tcacactcacactcaatagcatatagtacaacaacaaacacacacactctccctaccctaatggctaatactacgttgcatttgcatatttgtgcctctc |
31981378 |
T |
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| Q |
240 |
tg |
241 |
Q |
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| T |
31981379 |
tg |
31981380 |
T |
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