View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1274_low_92 (Length: 251)
Name: NF1274_low_92
Description: NF1274
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1274_low_92 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 42479806 - 42480046
Alignment:
| Q |
11 |
cagagaataggaaatagtgaaataccagctttccatgagaactttatcctgattcatgaggttaagagcagaaatggatactccatcttcattcttaacc |
110 |
Q |
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| T |
42479806 |
cagagaataggaaatagtgaaataccagctttccatgagaactttatcctgattcatgaggttaagagcagaaatggatacaccatcttcattcttaacc |
42479905 |
T |
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| Q |
111 |
agatacttagcaacagtagccaaaccataaagtctctgaacctttccatcttgttgagtacgaacagaacaagtgaggatattgtaacaagccaatagac |
210 |
Q |
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| T |
42479906 |
aaatacttagcaacagtagccaaaccataaagtctctgaacctttccatcttgttgagtacgaacagaacaagtgaggatattgtaacaagccaatagac |
42480005 |
T |
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| Q |
211 |
gcaagatacggtccagcataaccggtgcttcagggttagtt |
251 |
Q |
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| T |
42480006 |
gcaagatacggtccagcataaccggtgcttcagggttagtt |
42480046 |
T |
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