View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1274_low_95 (Length: 251)

Name: NF1274_low_95
Description: NF1274
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1274_low_95
NF1274_low_95
[»] chr3 (28 HSPs)
chr3 (3-240)||(49434470-49434707)
chr3 (3-175)||(3588773-3588945)
chr3 (3-175)||(33248362-33248534)
chr3 (3-175)||(10385687-10385859)
chr3 (3-175)||(20962873-20963045)
chr3 (1-175)||(45528018-45528192)
chr3 (3-175)||(1232108-1232280)
chr3 (3-175)||(7652839-7653011)
chr3 (3-175)||(8625996-8626168)
chr3 (3-175)||(9989768-9989940)
chr3 (3-168)||(48167818-48167983)
chr3 (3-175)||(52307702-52307874)
chr3 (3-169)||(22098039-22098205)
chr3 (3-169)||(37023063-37023229)
chr3 (3-156)||(23411850-23412003)
chr3 (3-175)||(20837466-20837638)
chr3 (3-175)||(36469053-36469225)
chr3 (3-175)||(37471304-37471476)
chr3 (3-168)||(4742627-4742792)
chr3 (3-175)||(27850168-27850340)
chr3 (31-169)||(22098381-22098519)
chr3 (31-175)||(27104391-27104536)
chr3 (3-175)||(23194292-23194464)
chr3 (3-169)||(2357533-2357699)
chr3 (6-76)||(26335484-26335554)
chr3 (128-168)||(24899554-24899594)
chr3 (128-168)||(24906020-24906060)
chr3 (118-175)||(17404754-17404811)
[»] chr1 (19 HSPs)
chr1 (4-175)||(36084132-36084303)
chr1 (1-170)||(16130876-16131045)
chr1 (3-175)||(39000798-39000970)
chr1 (3-175)||(40999721-40999893)
chr1 (1-175)||(11738415-11738589)
chr1 (3-175)||(431958-432130)
chr1 (3-175)||(15161800-15161971)
chr1 (3-175)||(16832400-16832572)
chr1 (3-175)||(44504885-44505057)
chr1 (3-169)||(33491821-33491987)
chr1 (3-175)||(12167833-12168005)
chr1 (3-175)||(38121549-38121721)
chr1 (3-175)||(49249437-49249609)
chr1 (3-175)||(9667313-9667485)
chr1 (3-175)||(8995879-8996051)
chr1 (31-170)||(13217670-13217810)
chr1 (3-169)||(9269009-9269174)
chr1 (100-175)||(20225979-20226054)
chr1 (118-175)||(13830756-13830813)
[»] chr8 (26 HSPs)
chr8 (1-175)||(12538534-12538708)
chr8 (3-175)||(22222292-22222464)
chr8 (3-175)||(22228634-22228806)
chr8 (1-175)||(22227125-22227299)
chr8 (1-175)||(22233467-22233641)
chr8 (3-175)||(28925760-28925932)
chr8 (1-170)||(16958923-16959091)
chr8 (3-175)||(3299174-3299346)
chr8 (3-175)||(8742900-8743072)
chr8 (3-175)||(9067784-9067956)
chr8 (3-175)||(22242860-22243032)
chr8 (3-175)||(27348399-27348571)
chr8 (3-175)||(41576948-41577120)
chr8 (3-169)||(13510336-13510502)
chr8 (3-169)||(13599866-13600032)
chr8 (3-175)||(11308604-11308776)
chr8 (3-175)||(28370466-28370638)
chr8 (3-167)||(36736831-36736995)
chr8 (3-160)||(21692819-21692976)
chr8 (3-175)||(34006390-34006562)
chr8 (3-175)||(4861568-4861740)
chr8 (3-175)||(17993239-17993411)
chr8 (33-175)||(13848945-13849088)
chr8 (3-110)||(22180974-22181081)
chr8 (104-169)||(1607743-1607808)
chr8 (135-175)||(22181081-22181121)
[»] chr2 (22 HSPs)
chr2 (3-175)||(9786721-9786893)
chr2 (3-175)||(28457494-28457666)
chr2 (10-175)||(13229959-13230124)
chr2 (3-175)||(27257757-27257929)
chr2 (3-175)||(32523301-32523473)
chr2 (2-175)||(14701015-14701188)
chr2 (3-175)||(42700590-42700762)
chr2 (3-169)||(21160338-21160504)
chr2 (3-160)||(31758650-31758807)
chr2 (3-175)||(23924649-23924821)
chr2 (1-175)||(36039879-36040053)
chr2 (3-175)||(29224087-29224259)
chr2 (3-175)||(29337386-29337558)
chr2 (3-169)||(41977967-41978133)
chr2 (3-167)||(36557187-36557351)
chr2 (3-175)||(43991898-43992059)
chr2 (65-169)||(8679418-8679522)
chr2 (3-166)||(24662754-24662918)
chr2 (3-134)||(36667533-36667658)
chr2 (3-54)||(40200312-40200363)
chr2 (141-175)||(36667505-36667539)
chr2 (118-175)||(11652148-11652205)
[»] scaffold0505 (1 HSPs)
scaffold0505 (3-175)||(601-773)
[»] chr7 (27 HSPs)
chr7 (3-170)||(3544500-3544667)
chr7 (3-175)||(24483119-24483290)
chr7 (1-175)||(45500328-45500502)
chr7 (3-175)||(2797180-2797352)
chr7 (3-175)||(10345922-10346094)
chr7 (3-175)||(31157893-31158065)
chr7 (3-167)||(1274960-1275124)
chr7 (3-175)||(2478033-2478205)
chr7 (3-175)||(8107505-8107677)
chr7 (3-175)||(12090076-12090249)
chr7 (3-175)||(22820477-22820649)
chr7 (3-175)||(22909490-22909662)
chr7 (3-169)||(31882483-31882649)
chr7 (3-175)||(2631769-2631941)
chr7 (3-175)||(6172888-6173060)
chr7 (3-175)||(23795467-23795639)
chr7 (3-175)||(12184237-12184404)
chr7 (3-175)||(22321418-22321590)
chr7 (3-175)||(1954300-1954471)
chr7 (3-168)||(31878972-31879135)
chr7 (3-168)||(12191214-12191379)
chr7 (65-175)||(22825043-22825153)
chr7 (3-118)||(19471864-19471979)
chr7 (33-175)||(29032411-29032553)
chr7 (54-169)||(4705001-4705116)
chr7 (22-175)||(31664129-31664282)
chr7 (40-160)||(27954261-27954382)
[»] chr6 (20 HSPs)
chr6 (3-175)||(5988619-5988791)
chr6 (3-175)||(13173441-13173613)
chr6 (3-175)||(14271045-14271217)
chr6 (1-175)||(34914059-34914233)
chr6 (3-175)||(3539420-3539592)
chr6 (3-175)||(13181974-13182146)
chr6 (3-175)||(24160873-24161045)
chr6 (3-175)||(1455164-1455336)
chr6 (3-175)||(1466856-1467028)
chr6 (3-175)||(26515045-26515217)
chr6 (3-175)||(9932422-9932594)
chr6 (3-175)||(21596145-21596317)
chr6 (3-175)||(24879238-24879410)
chr6 (3-175)||(25977322-25977494)
chr6 (3-169)||(16698282-16698448)
chr6 (3-156)||(34006875-34007028)
chr6 (3-175)||(32806380-32806552)
chr6 (3-166)||(15642791-15642952)
chr6 (3-175)||(9518063-9518235)
chr6 (1-169)||(21631554-21631722)
[»] chr4 (25 HSPs)
chr4 (3-175)||(1188337-1188509)
chr4 (3-167)||(42532511-42532675)
chr4 (1-169)||(19247451-19247619)
chr4 (3-175)||(40995164-40995336)
chr4 (3-175)||(4838753-4838925)
chr4 (3-175)||(22048054-22048226)
chr4 (3-175)||(26070100-26070272)
chr4 (3-175)||(26373248-26373420)
chr4 (3-175)||(46691654-46691826)
chr4 (13-166)||(9417059-9417212)
chr4 (3-175)||(5273179-5273351)
chr4 (3-175)||(21677285-21677456)
chr4 (7-175)||(33110319-33110487)
chr4 (1-175)||(20949116-20949291)
chr4 (3-169)||(30218010-30218175)
chr4 (3-168)||(21668529-21668694)
chr4 (3-175)||(323811-323983)
chr4 (1-168)||(53895749-53895916)
chr4 (3-169)||(52618875-52619041)
chr4 (3-175)||(35416313-35416485)
chr4 (1-158)||(55327147-55327300)
chr4 (35-168)||(42271781-42271914)
chr4 (88-175)||(33239375-33239462)
chr4 (133-175)||(6640465-6640507)
chr4 (132-175)||(19731022-19731065)
[»] chr5 (19 HSPs)
chr5 (3-175)||(32227031-32227203)
chr5 (3-175)||(11722893-11723065)
chr5 (3-170)||(27166720-27166887)
chr5 (1-175)||(30606693-30606867)
chr5 (3-175)||(9404797-9404969)
chr5 (3-175)||(24836095-24836267)
chr5 (3-175)||(33434975-33435147)
chr5 (3-175)||(34456668-34456840)
chr5 (3-175)||(37251522-37251694)
chr5 (3-175)||(11767127-11767299)
chr5 (3-175)||(16904226-16904398)
chr5 (3-168)||(34869369-34869535)
chr5 (3-175)||(6270262-6270435)
chr5 (3-175)||(14344834-14345006)
chr5 (3-169)||(7315577-7315743)
chr5 (3-131)||(519402-519530)
chr5 (3-169)||(39655659-39655825)
chr5 (104-175)||(31846426-31846497)
chr5 (3-76)||(31846352-31846425)
[»] scaffold0298 (2 HSPs)
scaffold0298 (3-175)||(15591-15763)
scaffold0298 (3-175)||(11821-11993)
[»] scaffold0019 (2 HSPs)
scaffold0019 (3-169)||(116191-116357)
scaffold0019 (3-175)||(169025-169197)
[»] scaffold0444 (1 HSPs)
scaffold0444 (3-175)||(12105-12277)
[»] scaffold0159 (1 HSPs)
scaffold0159 (3-175)||(28516-28688)
[»] scaffold0124 (1 HSPs)
scaffold0124 (3-175)||(12567-12739)
[»] scaffold0336 (1 HSPs)
scaffold0336 (3-175)||(9115-9287)
[»] scaffold0147 (1 HSPs)
scaffold0147 (3-175)||(7104-7276)
[»] scaffold0076 (1 HSPs)
scaffold0076 (3-175)||(25267-25439)
[»] scaffold0014 (1 HSPs)
scaffold0014 (3-175)||(76069-76241)
[»] scaffold0059 (1 HSPs)
scaffold0059 (33-169)||(16096-16232)
[»] scaffold0160 (1 HSPs)
scaffold0160 (3-175)||(34940-35112)
[»] scaffold0091 (1 HSPs)
scaffold0091 (3-175)||(14558-14729)
[»] scaffold0859 (1 HSPs)
scaffold0859 (32-168)||(4971-5107)
[»] scaffold0515 (1 HSPs)
scaffold0515 (129-175)||(7255-7301)
[»] scaffold0306 (1 HSPs)
scaffold0306 (129-175)||(7265-7311)
[»] scaffold0152 (1 HSPs)
scaffold0152 (129-175)||(24876-24922)


Alignment Details
Target: chr3 (Bit Score: 218; Significance: 1e-120; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 3 - 240
Target Start/End: Original strand, 49434470 - 49434707
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49434470 ttttgggtcatttaatcggttgggaaatcgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 49434569  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaactatataggttagagagtcttgagaga 202  Q
    | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  49434570 aaaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatcgtttaaaaagctagaactatataggttagagagtcttgagaga 49434669  T
Q  203 ggaactctataccacgtgtatgtaaatcttctagaatt 240  Q
    ||||||||||||||||||||||||||||||||||||||    
T  49434670 ggaactctataccacgtgtatgtaaatcttctagaatt 49434707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 3588773 - 3588945
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  3588773 ttttgggtcatttagtcggttgggaaatcgtcgattaaacgatccaatcgactttgtgattgtttaaatgtttgggaaatcgacatttaaacaatccctt 3588872  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  3588873 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatcgtttaaaaagctagaa 3588945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 33248362 - 33248534
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||| |||    
T  33248362 ttttgggtcatttaatcggttgggaaatcgtcgattaaacgatccaatcaactttgtgattgtttaaatgtatgagaaatcgacatttaaacaatctctt 33248461  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  33248462 agaaataacgatatcatttggacgcgaatgatattgtcgagtgattgtgataatatcgtttaaaaagctagaa 33248534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 10385859 - 10385687
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| | |||||||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  10385859 ttttgggtaatttaatcggttgggaaatcgtcgattaaactacccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 10385760  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  10385759 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 10385687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 20963045 - 20962873
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| | |||||||||| |||||||||||||||||||  |||||||||||| ||||||||  || |||| |||||||    
T  20963045 ttttgggtaatttaatcggttgggaaatcatcgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgttgaaacgatccctt 20962946  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  20962945 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatcgtttaaaaagctagaa 20962873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 45528018 - 45528192
Alignment:
Q  1 gtttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccc 100  Q
    |||||||||| |||||||||||||| ||| |||||||||||| |||||||||||||||||||| |||||||||||| ||||||||  | ||||| |||||    
T  45528018 gtttttgggtaatttaatcggttgggaaatcgtcgattaaactatccaatcgactttgtgattgtttaaatgtttgggaaatcgatgtgtaaacgatccc 45528117  T
Q  101 ttagaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||| | ||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||    
T  45528118 ttagaaataacgacaacatttggacacgaatgacattgtcgagtgattgtgataatatcgtttaaaaagctagaa 45528192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 1232280 - 1232108
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| || ||||||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  1232280 ttttgggtaatttaatcggttgggaaatcgtcgattaaactattcaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 1232181  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||    
T  1232180 agaaataacgatatcctttggacacgaatgatattgccgagtgattgtgataatatcgtttaaaaagctagaa 1232108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 7653011 - 7652839
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| | |||| ||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  7653011 ttttgggtaatttaatcggttgggaaatcgtcgattaaactacccaaacgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 7652912  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  7652911 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 7652839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 8625996 - 8626168
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| ||||||||| |||| ||| |||||||||||| | |||||||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  8625996 ttttgggtaatttaatcgattgggaaatcgtcgattaaactacccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 8626095  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  8626096 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 8626168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 9989768 - 9989940
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| | |||||||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  9989768 ttttgggtaatttaatcggttgggaaatcgtcgattaaactacccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 9989867  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  9989868 agaaataacaatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 9989940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 3 - 168
Target Start/End: Complemental strand, 48167983 - 48167818
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| |||||||||| |||||||   |||||||||||| ||||||||  ||||||| |||||||    
T  48167983 ttttgggtaatttaatcggttgggaaatcgtcgattaaactatccaatcgaatttgtgagcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 48167884  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaa 168  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  48167883 agaaataacgatatcatttgaacacgaatgatattgtcgagtgattgtgataatatcgtttaaaaa 48167818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 52307874 - 52307702
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| ||| |||||||| | |||| ||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  52307874 ttttgggtaatttaatcggttgggaaatcgttgattaaactacccaaacgactttgtgatcgtttaaatgtttgtgaaatcgatgtttaaacgatccctt 52307775  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  52307774 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 52307702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 3 - 169
Target Start/End: Original strand, 22098039 - 22098205
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||| | |||||||||||||| ||| |||||||||||| |||||||||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  22098039 ttttggttaatttaatcggttgggaaatcgtcgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 22098138  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaag 169  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||  |||||||||    
T  22098139 agaaataacgatatcatttggacacgaatgatattgtcgaatgattgtgataatataatttaaaaag 22098205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 3 - 169
Target Start/End: Original strand, 37023063 - 37023229
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| ||||||| |||| |||||||||||||||||||  ||||||||||||  ||| |||  ||||||| |||||||    
T  37023063 ttttgggtaatttaatcggttgggaaatcgtcgataaaactatccaatcgactttgtgatcgtttaaatgtttggaaaaacgatgtttaaacgatccctt 37023162  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaag 169  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  37023163 agaaataacgatatcatttggacacggatgatattgtcgagtgattgtgataatatcgtttaaaaag 37023229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 3 - 156
Target Start/End: Original strand, 23411850 - 23412003
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| ||||| |||||||| ||| |||||||||||| |||||||||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  23411850 ttttgggtaatttattcggttgggaaatcgtcgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 23411949  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataat 156  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  23411950 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataat 23412003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 20837466 - 20837638
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| | |||||||||||| ||| | |||||||||  ||||||||||||| |||||  ||| |||||||| ||||||||| ||||||| |||||||    
T  20837466 ttttgggtaaattaatcggttgggaaatcatcgattaaattatccaatcgacttcgtgatcgtttgaatgtttgggaaatcgacgtttaaacgatccctt 20837565  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  20837566 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 20837638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 36469225 - 36469053
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| ||||| |||||  ||| || ||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  36469225 ttttgggtaatttaatcggttgggaaatcgtcggttaaaatatctaaacgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 36469126  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  36469125 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 36469053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 37471476 - 37471304
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||| | |||||||| ||||  ||| |||||||||||  |||||||||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  37471476 ttttggataatttaatcagttgagaaatcgtcgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 37471377  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  37471376 aaaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatcgtttaaaaagctagaa 37471304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 3 - 168
Target Start/End: Complemental strand, 4742792 - 4742627
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||| | |||  ||||||||||| |||||||||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  4742792 ttttgggtaatttaatcggtttggaaattgtcgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 4742693  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaa 168  Q
    ||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||| ||||    
T  4742692 agaaataacgatatcatttggtcacgaatgatattttcgagtgattgtgataatatcgttttaaaa 4742627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 27850340 - 27850168
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||| | |||||||||||||  ||| |||||||||||| |||||||| ||||||||||  |||||||||||| |||| |||  ||||||| |||||||    
T  27850340 ttttggctaatttaatcggttgagaaatcgtcgattaaactatccaatcaactttgtgatcgtttaaatgtttgggaaaccgatgtttaaacgatccctt 27850241  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  27850240 agaaataatgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 27850168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 31 - 169
Target Start/End: Original strand, 22098381 - 22098519
Alignment:
Q  31 cgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatcccttagaaataacgatatcatttggacacgaa 130  Q
    |||||||||||| |||||||||||||||||||  |||||||||||| ||||||||  ||||||| |||||||||||||||||||||||||||||||||||    
T  22098381 cgtcgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaa 22098480  T
Q  131 tgatattgtagagtgattgtgataatatcgtttaaaaag 169  Q
    ||||||||| || |||||||||||||||  |||||||||    
T  22098481 tgatattgtcgaatgattgtgataatataatttaaaaag 22098519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 27104391 - 27104536
Alignment:
Q  31 cgtcgattaaacgatccaatcgactttgtgattatttaaat-gtttgagaaatcgacatttaaacaatcccttagaaataacgatatcatttggacacga 129  Q
    ||||||||||| ||||||||||||||||||||  ||||||| ||||| ||||||||||||||||  ||||||| ||||||||||||| ||||||||| ||    
T  27104391 cgtcgattaaatgatccaatcgactttgtgatcgtttaaatagtttgggaaatcgacatttaaatgatcccttcgaaataacgatatgatttggacatga 27104490  T
Q  130 atgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||| |||| |||||||||||||||||||||||||| ||| ||||    
T  27104491 atgatgttgttgagtgattgtgataatatcgtttaaatagctagaa 27104536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 23194292 - 23194464
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||| | ||| ||||||||||||||||| ||||||||||  ||| |||||  ||||| |||||| || ||| || | ||| ||    
T  23194292 ttttgggtaatttaatcggttaggaaatcgtcgattaaacgatccgatcgactttgcaattgtttaatagtttgggaaatcaacttttgaatagtccatt 23194391  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    |||||| |||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||    
T  23194392 agaaatcacgacatcatttggacacgaatgatgttgtcgagtgattgtgataatatcgtttaaaaagctagaa 23194464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 169
Target Start/End: Original strand, 2357533 - 2357699
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||| ||| ||||| | |||| ||| | ||||||||| || |||||||||||||||||| |||||  ||||| ||||||||| ||| || | | | ||    
T  2357533 ttttggatcaattaattgattgggaaatcatcgattaaatgaaccaatcgactttgtgattgtttaatagtttgggaaatcgacttttgaatagttcatt 2357632  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaag 169  Q
    |||||| |||| ||||||||||||| |||||| |||| |||||||||||||||||||||||||||||    
T  2357633 agaaatcacgacatcatttggacacaaatgatgttgttgagtgattgtgataatatcgtttaaaaag 2357699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 76
Target Start/End: Original strand, 26335484 - 26335554
Alignment:
Q  6 tgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttg 76  Q
    |||||| |||||| |||| | ||| |||| |||||| ||||||||||||||||||||  ||||||||||||    
T  26335484 tgggtcgtttaataggtttggaaatcgtcaattaaatgatccaatcgactttgtgatagtttaaatgtttg 26335554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 24899594 - 24899554
Alignment:
Q  128 gaatgatattgtagagtgattgtgataatatcgtttaaaaa 168  Q
    ||||||||||||  |||||||||||||||||||||||||||    
T  24899594 gaatgatattgtcaagtgattgtgataatatcgtttaaaaa 24899554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 24906060 - 24906020
Alignment:
Q  128 gaatgatattgtagagtgattgtgataatatcgtttaaaaa 168  Q
    ||||||||||||  |||||||||||||||||||||||||||    
T  24906060 gaatgatattgtcaagtgattgtgataatatcgtttaaaaa 24906020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 17404811 - 17404754
Alignment:
Q  118 atttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    |||| |||| |||| || |||| |||||||||||||||||||| ||||||||| ||||    
T  17404811 atttagacatgaataatgttgttgagtgattgtgataatatcgattaaaaagctagaa 17404754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 144; Significance: 8e-76; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 36084132 - 36084303
Alignment:
Q  4 tttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctta 103  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  36084132 tttgggtcatttaatcggttgggaaatcgtcgattaaacgatccaatcgactttgtgattatataaatgtttgggaaatcgacatttaaacaatccctta 36084231  T
Q  104 gaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||    
T  36084232 gaaataacgatatcatttggacacgaatgatattgtcaagtgattgtgataatatcgtttaaaaagctagaa 36084303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 16130876 - 16131045
Alignment:
Q  1 gtttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccc 100  Q
    ||||||||||||||||||||||| |  || ||||||||||||||||||||||||||||||||  ||||||| |||| ||||||||  ||||||| |||||    
T  16130876 gtttttgggtcatttaatcggttagggaatcgtcgattaaacgatccaatcgactttgtgatcgtttaaatatttgggaaatcgatgtttaaacgatccc 16130975  T
Q  101 ttagaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagc 170  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  16130976 ttagaaataacgatatcatttggacacaaatgatattgtcgagtgattgtgataatatcgtttaaaaagc 16131045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 39000970 - 39000798
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| | |||||||||||||||||| |||||||||||| ||||||||  ||||||| ||| |||    
T  39000970 ttttgggtaatttaatcggttgggaaatcgtcgattaaactacccaatcgactttgtgattgtttaaatgtttgggaaatcgatgtttaaacgatcgctt 39000871  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  39000870 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 39000798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 40999893 - 40999721
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||  | |||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  40999893 ttttgggtcatttaatcggttgggaaatcgtcgattaaacgatccaaaaggctttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 40999794  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  40999793 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 40999721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 11738589 - 11738415
Alignment:
Q  1 gtttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccc 100  Q
    |||||||||| |||||||||||||| ||| |||||| ||||| |||||||||||||||||||  ||||||| |||| |||||| |  ||||||| |||||    
T  11738589 gtttttgggtaatttaatcggttgggaaatcgtcgactaaactatccaatcgactttgtgatcgtttaaatttttgggaaatcaatgtttaaacgatccc 11738490  T
Q  101 ttagaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  11738489 ttagaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatcgtttaaaaagctagaa 11738415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 432130 - 431958
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| | |||||||||||| ||| |||||||||||  ||||||||||||| |||||| |||||||||||| ||||||||  ||||||| |||||||    
T  432130 ttttgggtgaattaatcggttgggaaatcgtcgattaaattatccaatcgacttcgtgattgtttaaatgtttgggaaatcgatgtttaaacgatccctt 432031  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  432030 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 431958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 15161800 - 15161971
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    ||||||||||||||||||||||| |||  |||||||||||| | ||||||||||||||||| |||||||||||| ||||| ||||||||||  |||||||    
T  15161800 ttttgggtcatttaatcggttgggaaatagtcgattaaacggttcaatcgactttgtgattgtttaaatgtttgggaaattgacatttaaatgatccctt 15161899  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    |||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||| ||||    
T  15161900 agaaataacgatatcatttggacatgaatgatattgtcgagt-attgtgataatatcgtttaaaaagctagaa 15161971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 16832572 - 16832400
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||| | ||| |||||||||||  |||||||||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  16832572 ttttgggtaatttaatcggttaggaaatcgtcgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 16832473  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||    
T  16832472 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatcgcttaaaaagctagaa 16832400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 44505057 - 44504885
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| |||||||||||||||||||  |||||||||||| ||||||||  ||||||| | | |||    
T  44505057 ttttgggtaatttaatcggttgggaaatcgtcgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgacctctt 44504958  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  44504957 agaaataacgacatcatttggacacgaatgatattgtcgagtgattgtgataatatcgtttaaaaagctagaa 44504885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 3 - 169
Target Start/End: Complemental strand, 33491987 - 33491821
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| | |||| ||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  33491987 ttttgggtaatttaatcggttgggaaatcgtcgattaaactacccaaacgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 33491888  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaag 169  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  33491887 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaag 33491821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 12168005 - 12167833
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| ||||||| |||||| ||| |||||||||||| | |||| ||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  12168005 ttttgggtaatttaattggttgggaaatcgtcgattaaactacccaaacgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 12167906  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  12167905 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 12167833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 38121721 - 38121549
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| | |||||||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  38121721 ttttgggtaatttaatcggttgggaaatcgtcgattaaactacccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 38121622  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    |||||||| ||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  38121621 agaaataatgatatcatttgtacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 38121549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 49249437 - 49249609
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    ||||| || |||||||||||||| ||| |||||||||||| | |||||||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  49249437 ttttgagtaatttaatcggttgggaaatcgtcgattaaactacccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 49249536  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  49249537 agaaataacgatatcatttggacacaaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 49249609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 9667485 - 9667313
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| | |||||||||||| ||| |||||||||||  ||||||||||||| |||||  |||||||||||| ||||||||  ||||||  |||||||    
T  9667485 ttttgggtaaattaatcggttggtaaatcgtcgattaaattatccaatcgacttcgtgatcgtttaaatgtttgggaaatcgatgtttaaaggatccctt 9667386  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  9667385 agaaataacgatatcatttggacacgaatgatattgttgagtgattgtgataatatagtttaaaaagctagaa 9667313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 8996051 - 8995879
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||| | |||||||||||||||||||  |||||||||||| |||||| |  ||||||| |||||||    
T  8996051 ttttgggtaatttaatcggttgggaaatcgtcgattaagctatccaatcgactttgtgatcgtttaaatgtttgggaaatcaatgtttaaacgatccctt 8995952  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||| ||||||||||||||| | |||||||||||||||| | ||||||||||| ||||    
T  8995951 agaaataacgatatcattttgacacgaatgatattattgagtgattgtgataatgtagtttaaaaagctagaa 8995879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 31 - 170
Target Start/End: Complemental strand, 13217810 - 13217670
Alignment:
Q  31 cgtcgattaaacgatccaatcgacttt-gtgattatttaaatgtttgagaaatcgacatttaaacaatcccttagaaataacgatatcatttggacacga 129  Q
    |||||||||||| |||||||||||||| | |||  ||||||||||||  |||||||  ||||||| ||||||||||||||||||||||||||||||||||    
T  13217810 cgtcgattaaactatccaatcgacttttgggatcgtttaaatgtttggaaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacga 13217711  T
Q  130 atgatattgtagagtgattgtgataatatcgtttaaaaagc 170  Q
     ||||||||| ||||||||||||||||||| ||||||||||    
T  13217710 ttgatattgtcgagtgattgtgataatatcatttaaaaagc 13217670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 169
Target Start/End: Original strand, 9269009 - 9269174
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||| |||| |||||| | |||| ||| |||||||||||||||||||||| |||| ||||| |||||  |||||  |||| ||| |||||| | ||| ||    
T  9269009 ttttaggtcgtttaattgattgggaaatcgtcgattaaacgatccaatcggcttt-tgattgtttaatagtttggaaaattgacttttaaatagtccatt 9269107  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaag 169  Q
    |||||| |||| ||||||| |||||||||||| |||| |||||||| ||||||||||||||||||||    
T  9269108 agaaatcacgacatcatttagacacgaatgatgttgtcgagtgattttgataatatcgtttaaaaag 9269174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 100 - 175
Target Start/End: Complemental strand, 20226054 - 20225979
Alignment:
Q  100 cttagaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    |||| |||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||| ||||    
T  20226054 cttataaataacgatatcatttggacacggatgagattgtcgagtgattgtgataatatcgtttaaaaagctagaa 20225979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 13830756 - 13830813
Alignment:
Q  118 atttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    |||| |||| |||| || |||| |||||||||||||||||||||||||||||| ||||    
T  13830756 atttagacatgaataatgttgttgagtgattgtgataatatcgtttaaaaagctagaa 13830813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 143; Significance: 3e-75; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 12538534 - 12538708
Alignment:
Q  1 gtttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccc 100  Q
    |||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||    
T  12538534 gtttttgggtcatttaatcgattagaaaatcgtcgattaaacgatccaatcgactttgtgattgtttaaatgtttgggaaatcgacatttaaacaattcc 12538633  T
Q  101 ttagaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  12538634 ttagaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatcgtttaaaaagctagaa 12538708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 22222464 - 22222292
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||| ||| |||||| | ||||||||||||||||| |||||||    
T  22222464 ttttgggtcatttaatcggttgggaaatcgtcgattaaacgatccagtcgactttgtgattgttttaatgttcgggaaatcgacatttaaacgatccctt 22222365  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  22222364 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatcgtttaaaaagctagaa 22222292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 22228806 - 22228634
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||| ||| |||||| | ||||||||||||||||| |||||||    
T  22228806 ttttgggtcatttaatcggttgggaaatcgtcgattaaacgatccagtcgactttgtgattgttttaatgttcgggaaatcgacatttaaacgatccctt 22228707  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  22228706 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatcgtttaaaaagctagaa 22228634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 22227299 - 22227125
Alignment:
Q  1 gtttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccc 100  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||||||| |||||||||||||| ||| ||||||||  |||||||||||||||| |||||    
T  22227299 gtttttgggtcatttaatctgttgggaaatcgtcgattaaacgatccagtcgactttgtgattgttttaatgtttggaaaatcgacatttaaacgatccc 22227200  T
Q  101 ttagaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  22227199 ttagaaataacgatatcatttggacacgaatgatattgtggagtgattgtgataatatcgtttaaaaagctagaa 22227125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 22233641 - 22233467
Alignment:
Q  1 gtttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccc 100  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||||||| |||||||||||||| ||| ||||||||  |||||||||||||||| |||||    
T  22233641 gtttttgggtcatttaatctgttgggaaatcgtcgattaaacgatccagtcgactttgtgattgttttaatgtttggaaaatcgacatttaaacgatccc 22233542  T
Q  101 ttagaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  22233541 ttagaaataacgatatcatttggacacgaatgatattgtggagtgattgtgataatatcgtttaaaaagctagaa 22233467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 28925932 - 28925760
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| | |||||||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  28925932 ttttgggtaatttaatcggttgggaaatcgtcgattaaactacccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 28925833  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  28925832 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 28925760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 16958923 - 16959091
Alignment:
Q  1 gtttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccc 100  Q
    ||||||||||| |||||| |||||| ||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||| || ||    
T  16958923 gtttttgggtcgtttaataggttgggaaatcgtcgattaaacgatccaatcgactctgtgattgtttaaatgtttgagaaattgacatttaaacgat-cc 16959021  T
Q  101 ttagaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagc 170  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||| |||||    
T  16959022 ttagaaataacgatatcatttggacacgaatgatgttgtcgagtgattgtgataatatcatttataaagc 16959091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 3299174 - 3299346
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| | |||||||||||||||||  |||||||||||| ||||||||  ||||||  |||||||    
T  3299174 ttttgggtaatttaatcggttgggaaatcgtcgattaaactacccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaatgatccctt 3299273  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  3299274 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 3299346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 8743072 - 8742900
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| | |||| ||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  8743072 ttttgggtaatttaatcggttgggaaatcgtcgattaaactacccaaacgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 8742973  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  8742972 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 8742900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 9067956 - 9067784
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| | |||| ||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  9067956 ttttgggtaatttaatcggttgggaaatcgtcgattaaactacccaaacgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 9067857  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  9067856 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 9067784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 22243032 - 22242860
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||| | |||||||||||||| ||| |||||||| ||| |||||||||||||||| ||  |||||||||||| ||||||||  ||||||  |||||||    
T  22243032 ttttggataatttaatcggttgggaaatcgtcgattgaactatccaatcgactttgtaatcgtttaaatgtttgggaaatcgatgtttaaaagatccctt 22242933  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  22242932 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatcgtttaaaaagccagaa 22242860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 27348399 - 27348571
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| | |||||| ||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  27348399 ttttgggtaatttaatcggttgggaaatcgtcgattaaactacccaatcaactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 27348498  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  27348499 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatggtttaaaaagctagaa 27348571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 41577120 - 41576948
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| | |||| ||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  41577120 ttttgggtaatttaatcggttgggaaatcgtcgattaaactacccaaacgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 41577021  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  41577020 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 41576948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 3 - 169
Target Start/End: Original strand, 13510336 - 13510502
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| |||||||||||||||||||  |||||||||||| |||||| |  ||||||| |||||||    
T  13510336 ttttgggtaatttaatcggttgggaaatcgtcgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcaatgtttaaacgatccctt 13510435  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaag 169  Q
    |||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13510436 agaattaccgatatcatttggacacgaatgatattgtcgagtgattgtgataatatcgtttaaaaag 13510502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 3 - 169
Target Start/End: Original strand, 13599866 - 13600032
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| |||||||||||||||||||  |||||||||||| |||||| |  ||||||| |||||||    
T  13599866 ttttgggtaatttaatcggttgggaaatcgtcgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcaatgtttaaacgatccctt 13599965  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaag 169  Q
    |||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13599966 agaattaccgatatcatttggacacgaatgatattgtcgagtgattgtgataatatcgtttaaaaag 13600032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 11308776 - 11308604
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| ||||||||||||   |||| ||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  11308776 ttttgggtaatttaatcggttgggaaatcgtcgattaaactgcccaaacgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 11308677  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  11308676 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 11308604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 28370466 - 28370638
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| | |||||||||||| ||| |||||||||||  ||||||||||||| |||||  |||||||||||| ||||||||  ||||||| |||||||    
T  28370466 ttttgggtaaattaatcggttgggaaatcgtcgattaaattatccaatcgacttcgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 28370565  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  28370566 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 28370638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 3 - 167
Target Start/End: Complemental strand, 36736995 - 36736831
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    ||||| |||||||||| | |||| ||| | ||||||||| ||| ||||||||||||||||  |||||||||||| |||||||| |||||||| |||||||    
T  36736995 ttttgagtcatttaatagattgggaaatcatcgattaaatgatgcaatcgactttgtgatcgtttaaatgtttgtgaaatcgatatttaaacgatccctt 36736896  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaa 167  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  36736895 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatcgtttaaaa 36736831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 21692819 - 21692976
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    ||||||||| |||||| |||||| |||   | ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||    
T  21692819 ttttgggtcgtttaataggttgggaaatttttgattaaacgatccaatcgactttgtgattgtttaaatgtttgggaaatcgacatttaaacgatccctt 21692918  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcg 160  Q
    |||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||    
T  21692919 agaaataatgatatcatttggacacgaatgatattgtcgagtgattatgataatatcg 21692976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 34006562 - 34006390
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| ||||| |||||  |||  ||| ||||||||||  |||||||||||| ||||||||  ||||||  |||||||    
T  34006562 ttttgggtaatttaatcggttgggaaatcgtcgtttaaattatcttatctactttgtgatcgtttaaatgtttgggaaatcgatgtttaaaagatccctt 34006463  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  34006462 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 34006390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 4861740 - 4861568
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| ||||||||||| ||||| |||||||||| |||| |||||  ||||| ||||||||| ||| || | ||| ||    
T  4861740 ttttgggtaatttaatcggttgggaaatcgtcgattaaatgatccgatcgactttgcgattgtttaatagtttgggaaatcgacttttgaatagtccatt 4861641  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    |||||| |||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||    
T  4861640 agaaatcacgacatcatttggacacgaatgatgttgtcgagtgattgtgataatatcgtttaaaaagctagaa 4861568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 17993239 - 17993411
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| ||||||||| |||||||| ||||||||||||||||| |||||||||| |||| |||||  ||||| ||||||||| ||| || | ||| ||    
T  17993239 ttttgggtaatttaatcgcttggaaaatcgtcgattaaacgatccgatcgactttgcgattgtttaatagtttgggaaatcgacttttgaatagtccatt 17993338  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    |||||| |||| |||||||||||||||||||| ||||  ||||||||||||||||||||||||||||| ||||    
T  17993339 agaaatcacgacatcatttggacacgaatgatgttgtcaagtgattgtgataatatcgtttaaaaagctagaa 17993411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 33 - 175
Target Start/End: Complemental strand, 13849088 - 13848945
Alignment:
Q  33 tcgattaaacgatccaatcgactttgtgattatttaaat-gtttgagaaatcgacatttaaacaatcccttagaaataacgatatcatttggacacgaat 131  Q
    ||||||||| ||||||||||| |||||||| |||||||| |||||  |||||||||||||||||||||||||||||||||| ||||||||| ||| ||||    
T  13849088 tcgattaaatgatccaatcgattttgtgatcatttaaatagtttggaaaatcgacatttaaacaatcccttagaaataacgctatcatttgaacatgaat 13848989  T
Q  132 gatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    | |||||| |||||||||||||||||||  ||||||||| ||||    
T  13848988 ggtattgttgagtgattgtgataatatcacttaaaaagctagaa 13848945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 22180974 - 22181081
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| | |||||||||||||||||  |||||||||||||||||||||  ||||||| |||||||    
T  22180974 ttttgggtaatttaatcggttgggaaatcgtcgattaaactacccaatcgactttgtgatcgtttaaatgtttgagaaatcgatgtttaaacgatccctt 22181073  T
Q  103 agaaataa 110  Q
    ||||||||    
T  22181074 agaaataa 22181081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 169
Target Start/End: Original strand, 1607743 - 1607808
Alignment:
Q  104 gaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaag 169  Q
    ||||| |||| || |||| |||| |||| || |||| |||| ||||||||||||||||||||||||    
T  1607743 gaaatcacgacattatttagacaggaataatgttgttgagtaattgtgataatatcgtttaaaaag 1607808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 175
Target Start/End: Original strand, 22181081 - 22181121
Alignment:
Q  135 attgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||| |||||||||||||||||| ||||||||||| ||||    
T  22181081 attgtcgagtgattgtgataatatagtttaaaaagctagaa 22181121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 137; Significance: 1e-71; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 9786893 - 9786721
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    ||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||    
T  9786893 ttttgggtcatttaatcggttgggaaatcgtcgattaaacgattcaatcgactttgtgattgtttaaatgtttgggaaatcgacatttaaacaattcctt 9786794  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||    
T  9786793 agaaataacgatatcatttggacacgaatgatattgccgagtgattgtgataatatcgtttaaaaagctagaa 9786721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 28457666 - 28457494
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    ||||||||||||||||||||||| ||| ||||||||||| ||||||||| ||||||||||| |||||||||||| ||||| ||||||||||||||| |||    
T  28457666 ttttgggtcatttaatcggttgggaaatcgtcgattaaatgatccaatcaactttgtgattgtttaaatgtttgggaaatagacatttaaacaatctctt 28457567  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||    
T  28457566 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatcgttttaaaagctagaa 28457494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 10 - 175
Target Start/End: Complemental strand, 13230124 - 13229959
Alignment:
Q  10 tcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatcccttagaaata 109  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||  ||||||||||||  |||||||  ||||||| ||||||||||||||    
T  13230124 tcatttaatcggttgggaaatcgtcgattaaacgatccaatcgactttgtgatcgtttaaatgtttggaaaatcgatgtttaaacgatcccttagaaata 13230025  T
Q  110 acgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  13230024 acgatatcatttggacacgaatgatattgttgagtgattgtgataatatcgtttaaaaagctagaa 13229959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 27257757 - 27257929
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||| | |||||||||||||| ||| |||||||||||| |||||||||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  27257757 ttttggataatttaatcggttgggaaatcgtcgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 27257856  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  27257857 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatcgtttaaaaagctagaa 27257929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 32523301 - 32523473
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    ||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||  ||||||| |||| ||||||||  ||| ||| |||||||    
T  32523301 ttttgggtcatttaatcggttgagaaatcgtcgattaaacgatccaatcgactttgtgatcgtttaaatatttgggaaatcgatgtttcaacgatccctt 32523400  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  32523401 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatcgtttaaaaagctagaa 32523473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 2 - 175
Target Start/End: Original strand, 14701015 - 14701188
Alignment:
Q  2 tttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccct 101  Q
    ||||| |||| |||||| |||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||| ||||||    
T  14701015 tttttaggtcgtttaataggttgggaaatcgtcgattaaacgatccaatcgactttgtgattgtttaaatgtttggaaaatcgacatttaaacgatccct 14701114  T
Q  102 tagaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    |||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| |||||||| ||||    
T  14701115 tagaaataacgatatcttttagacacgaatgatattgtcgagtgattgtgataatatcgtctaaaaagctagaa 14701188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 42700762 - 42700590
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||| ||| |||||||||||||| ||| |||||||||||| |||||||||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  42700762 tttttggtaatttaatcggttgggaaatcgtcgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 42700663  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||    
T  42700662 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatcatttaaaaagctagaa 42700590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 3 - 169
Target Start/End: Original strand, 21160338 - 21160504
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| || ||||||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  21160338 ttttgggtaatttaatcggttgggaaatcgtcgattaaactattcaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 21160437  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaag 169  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  21160438 agaaataacgatatcatttggacacgaatgatattgccgagtgattgtgataatatcgtttaaaaag 21160504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 31758650 - 31758807
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    ||||||||| |||||| |||||| ||| ||| ||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||| |||||||    
T  31758650 ttttgggtcgtttaataggttgggaaatcgttgattaaacgatccaatcgactttgtgattgtttaaatgtttggtaaatcgacatttaaacgatccctt 31758749  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcg 160  Q
    | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  31758750 aaaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatcg 31758807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 23924821 - 23924649
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||| ||||||  |||||||||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  23924821 ttttgggtaatttaatcggttgggaaatcgtcaattaaattatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 23924722  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  23924721 aaaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatcgtttaaaaagcaagaa 23924649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 36040053 - 36039879
Alignment:
Q  1 gtttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccc 100  Q
    |||||||||| |||||||||||||| ||| |||||||||||| |||| ||||||||| ||||| |||||||||||| ||||||||  ||||||| |||||    
T  36040053 gtttttgggtaatttaatcggttgggaaatcgtcgattaaactatcctatcgactttttgattgtttaaatgtttgggaaatcgatgtttaaacgatccc 36039954  T
Q  101 ttagaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  36039953 ttataaataacgatatcatttggacatgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 36039879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 29224087 - 29224259
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| ||||||| |||||| ||| |||||||||||| | |||||||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  29224087 ttttgggtaatttaattggttgggaaatcgtcgattaaactacccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 29224186  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  29224187 agaaataacgatatcatttggacacaaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 29224259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 29337386 - 29337558
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| ||||||| |||||| ||| |||||||||||| | |||||||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  29337386 ttttgggtaatttaattggttgggaaatcgtcgattaaactacccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 29337485  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  29337486 agaaataacgatatcatttggacacaaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 29337558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 3 - 169
Target Start/End: Original strand, 41977967 - 41978133
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||  ||| |||||||||| | |||||||||||||||||||  |||||||||||| |||||| |  ||||||| |||||||    
T  41977967 ttttgggtaatttaatcggttgagaaatcgtcgattaagctatccaatcgactttgtgatcgtttaaatgtttgggaaatcaatgtttaaacgatccctt 41978066  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaag 169  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  41978067 agaaataacgatatcatttggacacgaatgatattgttgagtgattgtgataatatagtttaaaaag 41978133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 167
Target Start/End: Complemental strand, 36557351 - 36557187
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||||||| || ||| ||| ||| ||||||||| || || ||||||||||||||||| | ||||||||||  |||| ||||||||||| |||||||    
T  36557351 ttttgggtcattcaaacggctgggaaatcgtcgattatacaatgcaatcgactttgtgattgtgtaaatgtttggaaaattgacatttaaacgatccctt 36557252  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaa 167  Q
    | ||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||    
T  36557251 ataaataacgatatcatttggacacgaatgatattatcaagtgattgtgataatatcgtttaaaa 36557187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 43991898 - 43992059
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| ||||||| |||| ||| |||||||||||||||  |||||||||||| ||||||||           ||||||    
T  43991898 ttttgggtaatttaatcggttgggaaatcgtcgataaaactatctaatcgactttgtgatcgtttaaatgtttgggaaatcga-----------tccctt 43991986  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||    
T  43991987 agaaataacgatatcatttggacactaatgatattgtcgagtgattgtgataatatcgtttaaaaagctagaa 43992059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 65 - 169
Target Start/End: Complemental strand, 8679522 - 8679418
Alignment:
Q  65 tttaaatgtttgagaaatcgacatttaaacaatcccttagaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgttta 164  Q
    |||||||||||| ||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8679522 tttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatcgttta 8679423  T
Q  165 aaaag 169  Q
    |||||    
T  8679422 aaaag 8679418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 24662918 - 24662754
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaat-gtttgagaaatcgacatttaaacaatccct 101  Q
    |||| |||| |||||| |||||| ||| ||||||||||| ||||||||| || |||||||||||||||| ||||| ||||||||| |||||| ||||| |    
T  24662918 tttttggtcgtttaataggttgggaaatcgtcgattaaatgatccaatcaacattgtgattatttaaatagtttgggaaatcgacttttaaataatccat 24662819  T
Q  102 tagaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaa 166  Q
    ||||||| |||| || ||||||||||||||||| || | || |||||||||||||||||||||||    
T  24662818 tagaaatcacgacattatttggacacgaatgatgttattgaatgattgtgataatatcgtttaaa 24662754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 134
Target Start/End: Complemental strand, 36667658 - 36667533
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||| ||||| ||| |||||||||||| |||||||||||||||||||  |||||||||||  ||||||||  |||      ||||||    
T  36667658 ttttgggtaatttaatccgttgggaaatcgtcgattaaactatccaatcgactttgtgatcgtttaaatgtttaggaaatcgatgttt------tccctt 36667565  T
Q  103 agaaataacgatatcatttggacacgaatgat 134  Q
    ||||||||||||||||||||||||||| ||||    
T  36667564 agaaataacgatatcatttggacacgagtgat 36667533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 40200312 - 40200363
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgac 54  Q
    ||||||||| |||||| |||||| ||| ||||||||||||||||||||||||    
T  40200312 ttttgggtcgtttaataggttgggaaatcgtcgattaaacgatccaatcgac 40200363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 175
Target Start/End: Complemental strand, 36667539 - 36667505
Alignment:
Q  141 gagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    |||||||||||||||||||||||||||||| ||||    
T  36667539 gagtgattgtgataatatcgtttaaaaagctagaa 36667505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 11652148 - 11652205
Alignment:
Q  118 atttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    |||| |||| |||| |||||||  ||||||||||||||||||| ||||||||| ||||    
T  11652148 atttagacatgaataatattgttaagtgattgtgataatatcgattaaaaagctagaa 11652205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 773 - 601
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||| |||||||    
T  773 ttttgggtcatttaatcggttgggaaatcgtcgattaaacgatccaatcgactttgtgattgttttaatgtttgggaaatcgacatttaaacgatccctt 674  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||| ||||    
T  673 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatattttttaaaaagctagaa 601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 132; Significance: 1e-68; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 3 - 170
Target Start/End: Complemental strand, 3544667 - 3544500
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  3544667 ttttgggtcatttaatcggttgggaaatcgtcgattaaacgatccaatcgactttgtgattgtttaaatgtttgagaaatcgacatttaaacaatctctt 3544568  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagc 170  Q
    ||||||||| ||||||||||||||  |||| |||||| ||||||||||||||||||||||||||||||    
T  3544567 agaaataacaatatcatttggacaaaaatgctattgtcgagtgattgtgataatatcgtttaaaaagc 3544500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 24483119 - 24483290
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||||||||||||||||| | || ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||    
T  24483119 ttttgggtcatttaatcggttg-agaatcgtcgattaaacgatccaatcgactttgtgattgtttaaatgtttgggaaatcgacatttaaacaatccatt 24483217  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||| ||||    
T  24483218 agaaataacgatatcatttggacccgaatgatattgtcgagtgattgtgataatatcgttaaaaaagctagaa 24483290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 45500502 - 45500328
Alignment:
Q  1 gtttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccc 100  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |  |||||||||||| ||||||||  |||||||||||||    
T  45500502 gtttttgggtcatttaatcggttgggaaatcgtcgattaaacgatccaatcgactttgtggtcgtttaaatgtttgggaaatcgatgtttaaacaatccc 45500403  T
Q  101 ttagaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||| ||||    
T  45500402 ttagaaataacgatatcatttagacatgaatgatattgtcgagtgattgtgataatatcgtttaaaaagctagaa 45500328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 2797352 - 2797180
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| ||||||||||||||||| |  |||||||||||| ||||||||  ||||||| |||||||    
T  2797352 ttttgggtaatttaatcggttgggaaatcgtcgattaaactatccaatcgactttgtggtcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 2797253  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  2797252 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatcgtttaaaaagctagaa 2797180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 10346094 - 10345922
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| | |||||||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  10346094 ttttgggtaatttaatcggttgggaaatcgtcgattaaactacccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 10345995  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  10345994 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 10345922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 31158065 - 31157893
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| | |||||||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  31158065 ttttgggtaatttaatcggttgggaaatcgtcgattaaactacccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 31157966  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  31157965 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 31157893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 167
Target Start/End: Original strand, 1274960 - 1275124
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| ||||||||| |||| ||| |||||||||||| |||||||||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  1274960 ttttgggtaatttaatcgattgggaaatcgtcgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 1275059  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaa 167  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  1275060 agaaataacgatatcatttggacacaaatgatattgtcgagtgattgtgataatatcgtttaaaa 1275124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 2478033 - 2478205
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    ||||||||| |||||| |||| | ||| ||||||||||||||||||||||||||||||||| ||||||||||||  ||||| |||||||||| |||||||    
T  2478033 ttttgggtcgtttaataggttaggaaatcgtcgattaaacgatccaatcgactttgtgattgtttaaatgtttggaaaatcaacatttaaacgatccctt 2478132  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    | |||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||| ||||    
T  2478133 aaaaataacgatatcatttggacatgaatgatgttgtcgagtgattgtgataatatcgtttaaaaagctagaa 2478205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 8107677 - 8107505
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| | |||| ||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  8107677 ttttgggtaatttaatcggttgggaaatcgtcgattaaactacccaaacgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 8107578  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  8107577 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 8107505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 12090249 - 12090076
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| |||||||||||||||||||  |||||||||||| ||||||||  ||||||||| | |||    
T  12090249 ttttgggtaatttaatcggttgggaaatcgtcgattaaactatccaatcgactttgtgatcctttaaatgtttgggaaatcgatgtttaaacaacctctt 12090150  T
Q  103 agaaataacgatatcatttggacacgaatgata-ttgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    |||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||| ||||    
T  12090149 agaaataacgatatcatttggacatgaatgatatttgtcgagtgattgtgataatatcgtttaaaaagctagaa 12090076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 22820477 - 22820649
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| | |||||||||||| ||| |||||||||||  ||||||||||||| |||||  |||||||||||| ||||||||  ||||||| |||||||    
T  22820477 ttttgggtaaattaatcggttgggaaatcgtcgattaaattatccaatcgacttcgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 22820576  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  22820577 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 22820649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 22909490 - 22909662
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||| | |||||||||||||| ||| |||||||||||  |||||||||||||||||||  ||||||||||||  |||||||  ||||||| |||||||    
T  22909490 ttttggataatttaatcggttgggaaatcgtcgattaaattatccaatcgactttgtgatcgtttaaatgtttggaaaatcgatgtttaaacgatccctt 22909589  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||    
T  22909590 agaaataacgatatcatttggacacaaatgatattgtcgagtgattgtgataatatcgtttaaaaagctagaa 22909662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 3 - 169
Target Start/End: Original strand, 31882483 - 31882649
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| | | |||||||| |||||||||| ||||||||| |||||||||||| ||||||||  ||||||| |||||||    
T  31882483 ttttgggtgatttaatcggttgggaaatcattgattaaactatccaatcgaatttgtgattgtttaaatgtttgggaaatcgatgtttaaacgatccctt 31882582  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaag 169  Q
     |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  31882583 ggaaataacaatatcatttggacacgaatgatattgtcgagtgattgtgataatatcgtttaaaaag 31882649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 2631769 - 2631941
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||| | |||||||||||||| ||| |||||||||||| | |||| ||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  2631769 ttttggataatttaatcggttgggaaatcgtcgattaaactacccaaacgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 2631868  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  2631869 agaaataacgatattatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 2631941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 6172888 - 6173060
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||| ||| |||||||||||||| ||| |||||||||||| |||||||||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  6172888 ttttaggtaatttaatcggttgggaaatcgtcgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 6172987  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    | ||||||||||||||||||||||| ||||||||||| |||||||| ||||||||| ||||||||||| ||||    
T  6172988 aaaaataacgatatcatttggacacaaatgatattgttgagtgattatgataatatagtttaaaaagctagaa 6173060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 23795467 - 23795639
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| ||||| ||| |||| ||| |||||||||||| | |||| ||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  23795467 ttttgggtaatttagtcgattgggaaatcgtcgattaaactacccaaacgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 23795566  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  23795567 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 23795639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 12184237 - 12184404
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||| ||||| ||| |||||||||||| |||||||||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  12184237 ttttgggtaatttaatcagttgggaaatcgtcgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 12184336  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||     |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  12184337 agaaataacg-----atttggacacgaatgatattgtcgagtgattgtgataatatcgtttaaaaagctagaa 12184404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 22321590 - 22321418
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| ||||||||| || | ||||| |||||| ||||  |||||| ||||| ||||||||  ||||||| |||||||    
T  22321590 ttttgggtaatttaatcggttgggaaatcgtcgattagactacccaattgactttttgatcgtttaaaagtttgggaaatcgatgtttaaacgatccctt 22321491  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  22321490 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 22321418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 1954300 - 1954471
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    ||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||  | |||||||||   |||||||  ||||||  ||||| |    
T  1954300 ttttgggtcatttaatcggttaggaaatcgtcgattaaacgatccaatcgactttgtgatcgtataaatgtttagaaaatcgatgtttaaatgatcccat 1954399  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||| ||||    
T  1954400 agaaataacgatatcatttggacactaatgat-ttgtcgagtgattgtgataatatcgtttaaaaagctagaa 1954471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 3 - 168
Target Start/End: Original strand, 31878972 - 31879135
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| ||||||| |||||| ||| |||||||||| | |||||||||| ||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  31878972 ttttgggtaatttaattggttgggaaatcgtcgattaatctatccaatcgattttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 31879071  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaa 168  Q
    |||||||||||||||||||||| || |||||||||||   ||||||||||||||||||||||||||    
T  31879072 agaaataacgatatcatttggaaacaaatgatattgt--cgtgattgtgataatatcgtttaaaaa 31879135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 3 - 168
Target Start/End: Original strand, 12191214 - 12191379
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| ||||||||| || | ||  | || ||| ||| |||||||||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  12191214 ttttgggtaatttaatcgttttgtaattcttctatttaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 12191313  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaa 168  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||    
T  12191314 agaaataacgatatcatttggacacgattgatattgtcgagtgattgtgataatatcatttaaaaa 12191379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 22825043 - 22825153
Alignment:
Q  65 tttaaatgtttgagaaatcgacatttaaacaatcccttagaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgttta 164  Q
    |||||||||||| ||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  22825043 tttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagttta 22825142  T
Q  165 aaaagccagaa 175  Q
    |||||| ||||    
T  22825143 aaaagctagaa 22825153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 19471979 - 19471864
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| |||||||||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  19471979 ttttgggtaatttaatcggttgggaaatcgtcgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 19471880  T
Q  103 agaaataacgatatca 118  Q
    ||||||||||||||||    
T  19471879 agaaataacgatatca 19471864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 33 - 175
Target Start/End: Complemental strand, 29032553 - 29032411
Alignment:
Q  33 tcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatcccttagaaataacgatatcatttggacacgaatg 132  Q
    ||||||||| ||||| ||||||||||||||| |||||  ||||| ||||||||| ||| || | ||| |||||||| |||| |||||||||||||| |||    
T  29032553 tcgattaaatgatccgatcgactttgtgattgtttaatagtttgggaaatcgacttttgaatagtccattagaaatcacgacatcatttggacacggatg 29032454  T
Q  133 atattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    || |||| |||||||||||||||||||||||||||||| ||||    
T  29032453 atgttgttgagtgattgtgataatatcgtttaaaaagctagaa 29032411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 54 - 169
Target Start/End: Complemental strand, 4705116 - 4705001
Alignment:
Q  54 ctttgtgattatttaaatgtttgagaaatcgacatttaaacaatcccttagaaataacgatatcatttggacacgaatgatattgtagagtgattgtgat 153  Q
    |||||||||  |||||||||||   ||||||| |||||||| ||||||||||| ||||||||||||||||||||  ||| |||||| |||||||||||||    
T  4705116 ctttgtgatcgtttaaatgttttgaaaatcgatatttaaacgatcccttagaactaacgatatcatttggacacatatggtattgttgagtgattgtgat 4705017  T
Q  154 aatatcgtttaaaaag 169  Q
    ||||||||||||||||    
T  4705016 aatatcgtttaaaaag 4705001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 175
Target Start/End: Complemental strand, 31664282 - 31664129
Alignment:
Q  22 ttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatcccttagaaataacgatatcattt 121  Q
    |||| ||| |||||||||||| || ||||||||||| | ||| ||||||||||||   ||||||  ||||||| | | |||| |||||||||||||||||    
T  31664282 ttgggaaatcgtcgattaaactattcaatcgacttttttattgtttaaatgtttggagaatcgatgtttaaacgacctcttaaaaataacgatatcattt 31664183  T
Q  122 ggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    |||||| |||||||||||  | |||||||| |||||||||||||||||| ||||    
T  31664182 ggacacaaatgatattgtcaaatgattgtgttaatatcgtttaaaaagctagaa 31664129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 160
Target Start/End: Complemental strand, 27954382 - 27954261
Alignment:
Q  40 aacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatcccttagaaataacgatatcatttggacacgaatgatattgt 139  Q
    |||||| ||||||||| |  |||| |||||  ||||| ||||| ||||||||||  || | |||||||| |||| |||||||||||||||||||| ||||    
T  27954382 aacgatgcaatcgactattggattgtttaatagtttgggaaattgacatttaaatgattcattagaaatcacgacatcatttggacacgaatgatgttgt 27954283  T
Q  140 agagtgat-tgtgataatatcg 160  Q
     |||  || |||||||||||||    
T  27954282 tgaggaatatgtgataatatcg 27954261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 129; Significance: 7e-67; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 5988791 - 5988619
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||||||||||||||| || ||| |||| ||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||    
T  5988791 ttttgggtcatttaatcggtagggaaatcgtcaattaaacgatccaatcgacgttgtgaatatttaaatgtttgggaaatcgacatttaaacaatccctt 5988692  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||| ||||    
T  5988691 agaaataacgatatcatttggacacgaatgatattgtcgaatgattgtaataatatcgtttaaaaagctagaa 5988619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 13173613 - 13173441
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| | |||||| ||| |||||||||||||||||||  |||||||||||| ||||||||  |||||||||||||||    
T  13173613 ttttgggtaatttaatcggttgggaaatcttcgattgaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacaatccctt 13173514  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  13173513 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatcgtttaaaaagctagaa 13173441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 14271045 - 14271217
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| |||||||||||||||||||  |||||||||||| ||||| ||  ||||||| |||||||    
T  14271045 ttttgggtaatttaatcggttgggaaatcgtcgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaattgatgtttaaacgatccctt 14271144  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  14271145 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatcgtttaaaaagctagaa 14271217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 34914059 - 34914233
Alignment:
Q  1 gtttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccc 100  Q
    |||||||||| |||||||| ||||| ||| |||||||||||| |||||||||||||||||||  |||||||||||| ||||||||  ||||||  |||||    
T  34914059 gtttttgggtaatttaatcagttgggaaatcgtcgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaatgatccc 34914158  T
Q  101 ttagaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  34914159 ttagaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatcgtttaaaaagctagaa 34914233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 3539420 - 3539592
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| | |||||||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  3539420 ttttgggtaatttaatcggttgggaaatcgtcgattaaactacccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 3539519  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  3539520 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 3539592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 13182146 - 13181974
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||||||| |||||||| ||| |||||||||||||||||||  |||||||||||| ||||||||  ||||||| |||| ||    
T  13182146 ttttgggtaatttaatcggttggaaaatcgtcgattgaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccttt 13182047  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  13182046 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatattgtttaaaaagctagaa 13181974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 24161045 - 24160873
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| |||||||||||||||||||  |||||||||||| | ||||||  ||||||| |||||||    
T  24161045 ttttgggtaatttaatcggttgggaaatcgtcgattaaactatccaatcgactttgtgatcgtttaaatgtttggggaatcgatgtttaaacgatccctt 24160946  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||    
T  24160945 agaaataacgatatcatttggacacgaatgatattgtcgaatgattgtgataatatcgtttaaaaagctagaa 24160873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 1455164 - 1455336
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| ||| |||||||| |||||||||||||||||||  |||||||||||| ||||| ||  ||||||| |||||||    
T  1455164 ttttgggtaatttaatcggttgggaaatcgttgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaattgatgtttaaacgatccctt 1455263  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||    
T  1455264 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatcgttgaaaaagctagaa 1455336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 1466856 - 1467028
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| ||| |||||||| |||||||||||||||||||  |||||||||||| ||||| ||  ||||||| |||||||    
T  1466856 ttttgggtaatttaatcggttgggaaatcgttgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaattgatgtttaaacgatccctt 1466955  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||    
T  1466956 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatcgttgaaaaagctagaa 1467028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 26515217 - 26515045
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| | |||| ||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  26515217 ttttgggtaatttaatcggttgggaaatcgtcgattaaactacccaaacgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 26515118  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  26515117 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 26515045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 9932594 - 9932422
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| | |||| ||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  9932594 ttttgggtaatttaatcggttgggaaatcgtcgattaaactacccaaacgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 9932495  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||| ||||    
T  9932494 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaataagctagaa 9932422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 21596317 - 21596145
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||  |||||||||||||| ||||  |||||||||||||||||||||  ||||||| | | |||    
T  21596317 ttttgggtaatttaatcggttgggaaatcgtcgattaaaatatccaatcgactttttgatcgtttaaatgtttgagaaatcgatgtttaaacgacctctt 21596218  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  21596217 agcaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatcgtttaaaaagctagaa 21596145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 24879238 - 24879410
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| ||||||| |||||| ||| |||||||||||  |||||||||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  24879238 ttttgggtaatttaattggttgggaaatcgtcgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 24879337  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    |||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||| ||||    
T  24879338 agaaataacgatatcatttggacaagaatgatattgtcgagcgattgtgataatatcgtttaaaaagctagaa 24879410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 25977322 - 25977494
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| | |||||||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  25977322 ttttgggtaatttaatcggttgggaaatcgtcgattaaactaaccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 25977421  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    |||||||||||||||||||||| |||||||||||||| ||| |||||||||||||| ||||||||||| ||||    
T  25977422 agaaataacgatatcatttggaaacgaatgatattgtcgagagattgtgataatatagtttaaaaagctagaa 25977494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 3 - 169
Target Start/End: Original strand, 16698282 - 16698448
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||| | ||| |||||||||||| |||||||||||||||||||  ||||||||||||  |||||||  ||||| | |||||||    
T  16698282 ttttgggtaatttaatcggtttggaaatcgtcgattaaactatccaatcgactttgtgatcgtttaaatgtttggaaaatcgatttttaagcgatccctt 16698381  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaag 169  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  16698382 agaaataacgttatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaag 16698448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 3 - 156
Target Start/End: Original strand, 34006875 - 34007028
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| | |||| ||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  34006875 ttttgggtaatttaatcggttgggaaatcgtcgattaaactacccaaacgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 34006974  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataat 156  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  34006975 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtggtaat 34007028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 32806552 - 32806380
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| ||||||||||| |||||||  ||||||||||||  |||||||  ||||||| | | |||    
T  32806552 ttttgggtaatttaatcggttgggaaatcgtcgattaaactatccaatcgacgttgtgatcgtttaaatgtttggaaaatcgatgtttaaacgacctctt 32806453  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||| ||||||||||| ||||    
T  32806452 agaaataacgatatcatttggacacaaatgatattgtcgagcgattgtgataatattgtttaaaaagctagaa 32806380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 15642791 - 15642952
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaat-gtttgagaaatcgacatttaaacaatccct 101  Q
    |||||| || |||||| |||| | ||| ||||||||||||||||||||||||||||||||||||||||| |||||  |||||||| |||||| ||||| |    
T  15642791 ttttggatcgtttaataggttaggaaatcgtcgattaaacgatccaatcgactttgtgattatttaaatagtttggaaaatcgacttttaaataatccat 15642890  T
Q  102 tagaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaa 166  Q
    ||||||| |||| |||||||||||| ||||||   ||| |||||||||| |||||||||||||||    
T  15642891 tagaaatcacgacatcatttggacaagaatga---tgttgagtgattgtaataatatcgtttaaa 15642952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 9518235 - 9518063
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    ||||||||| |||||| | |||  ||| ||||||||||||||||| ||||||||||||||| |||||  ||||| ||||||||| ||| |  | ||| ||    
T  9518235 ttttgggtcgtttaatagattgagaaatcgtcgattaaacgatccgatcgactttgtgattgtttaatagtttgggaaatcgacttttgagtagtccatt 9518136  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    |||||| |||| |||||||||||||||||||| ||||  ||||||| || |||||||||||||||||| ||||    
T  9518135 agaaatcacgacatcatttggacacgaatgatgttgtttagtgattatgctaatatcgtttaaaaagctagaa 9518063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 21631554 - 21631722
Alignment:
Q  1 gtttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccc 100  Q
    ||||||||||| |||||| | |||  ||| |||||||||||||||| |||||||||||||||| | |||  ||||| || |||||  |||||| | ||||    
T  21631554 gtttttgggtcgtttaatagattgagaaatcgtcgattaaacgatctaatcgactttgtgattgtgtaatagtttgggatatcgaattttaaatagtccc 21631653  T
Q  101 ttagaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaag 169  Q
    || ||||| |||| |  |||||||||||||||||  ||| |||||||||||||||||||||||||||||    
T  21631654 ttggaaatcacgacacaatttggacacgaatgatgatgttgagtgattgtgataatatcgtttaaaaag 21631722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 125; Significance: 2e-64; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 1188337 - 1188509
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||| ||||| |||||||||||||||||||| |||||||||||| ||||||||  |||||||||||||||    
T  1188337 ttttgggtgatttaatcggttgggaaatcgtcgaataaactatccaatcgactttgtgattgtttaaatgtttgggaaatcgatgtttaaacaatccctt 1188436  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||    
T  1188437 agaaataacgatatcatttggacacgtatgatattgtcgagtgattgtgataatatcgtttaaaaagctagaa 1188509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 3 - 167
Target Start/End: Complemental strand, 42532675 - 42532511
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| ||||||| |||||| ||| |||||||||||| |||||||||||||||||||  |||||||||||| ||||||||  |||||||||||||||    
T  42532675 ttttgggtaatttaattggttgggaaatcgtcgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacaatccctt 42532576  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaa 167  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  42532575 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatcgtttaaaa 42532511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 19247619 - 19247451
Alignment:
Q  1 gtttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccc 100  Q
    |||||||||| |||||||||||||| ||| |||||||||||| |||||||| ||||||||||  |||||||||||| ||||||||  ||||||| |||||    
T  19247619 gtttttgggtaatttaatcggttgggaaatcgtcgattaaactatccaatcaactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccc 19247520  T
Q  101 ttagaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaag 169  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  19247519 ttagaaataacgatatcatttggatacgaatgatattgtcgagtgattgtgataatatcgtttaaaaag 19247451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 40995336 - 40995164
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    ||||| ||||||||||||||||| ||| ||||||||||| || |||||||||||||||||  |||||||||||||||||||||  ||||||| |||||||    
T  40995336 ttttgagtcatttaatcggttgggaaatcgtcgattaaatgaaccaatcgactttgtgatcgtttaaatgtttgagaaatcgatgtttaaacgatccctt 40995237  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||| ||||    
T  40995236 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatattttttaaaaagctagaa 40995164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 4838925 - 4838753
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| | |||| ||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  4838925 ttttgggtaatttaatcggttgggaaatcgtcgattaaactacccaaacgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 4838826  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  4838825 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 4838753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 22048054 - 22048226
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| | |||| ||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  22048054 ttttgggtaatttaatcggttgggaaatcgtcgattaaactacccaaacgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 22048153  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  22048154 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 22048226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 26070100 - 26070272
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| ||||||||| |||| ||| |||||||||||| ||| ||||||||||||| |  |||||||||||||||||||||  ||| ||| |||||||    
T  26070100 ttttgggtaatttaatcgattgggaaatcgtcgattaaactatctaatcgactttgtggtcgtttaaatgtttgagaaatcgatgttttaacgatccctt 26070199  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  26070200 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatcgtttaaaaagctagaa 26070272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 26373420 - 26373248
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    ||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||  |||||| ||||| |||||| |  |||||||||||||||    
T  26373420 ttttgggtcatttaatcggttgagaaatcgtcgattaaacgatccaatcgactttgtgatcgtttaaacgtttgggaaatcaatgtttaaacaatccctt 26373321  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||| |||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||    
T  26373320 agaaataacaatataatttggacacgaatgatattgtcgagtgattgtgatagtatcgtttaaaaagctagaa 26373248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 46691826 - 46691654
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||| ||||| |||||||||||| ||| | ||||||||||||||||||| ||||||||||  ||||||||||||  |||||||  ||||||| |||||||    
T  46691826 ttttaggtcaattaatcggttgggaaatcatcgattaaacgatccaatcaactttgtgatcgtttaaatgtttggaaaatcgatgtttaaacgatccctt 46691727  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  46691726 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatcgtttaaaaagctagaa 46691654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 166
Target Start/End: Complemental strand, 9417212 - 9417059
Alignment:
Q  13 tttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatcccttagaaataacg 112  Q
    |||||| |||||| ||| ||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||| |||||||||||    
T  9417212 tttaataggttgggaaatcgtcgattaaatgatccaatcgactttgtgattgtttaaatgtttgggaaatcgacatttaaacgatcccctagaaataacg 9417113  T
Q  113 atatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaa 166  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||| |||||    
T  9417112 atatcatttggacacgaatgatattgtcgagtgattgtgataatgtcgattaaa 9417059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 5273351 - 5273179
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| | |||| ||||||||||||  ||||||||||||  |||||||  ||||||| |||||||    
T  5273351 ttttgggtaatttaatcggttgggaaatcgtcgattaaactacccaaacgactttgtgatcgtttaaatgtttggaaaatcgatgtttaaacgatccctt 5273252  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  5273251 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 5273179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 21677456 - 21677285
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||| ||| |||||||||||||| ||| |||||||||||| |||||||||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  21677456 ttttaggtaatttaatcggttgggaaatcgtcgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 21677357  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    |||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||| ||||    
T  21677356 agaaataacgatatcatttggacatgaatgatattgtcgagt-attgtgataatatcgtttaaaaagctagaa 21677285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 7 - 175
Target Start/End: Complemental strand, 33110487 - 33110319
Alignment:
Q  7 gggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatcccttagaa 106  Q
    |||| |||||||||||||| ||| |||||||||||| |||||||||||||||||||| |||||||||||| || |||||||||| |||||||||||||||    
T  33110487 gggtaatttaatcggttgggaaatcgtcgattaaactatccaatcgactttgtgattgtttaaatgtttgggagatcgacatttgaacaatcccttagaa 33110388  T
Q  107 ataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    || |||| | |||||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||    
T  33110387 atcacgacaacatttggacacgaatgatgttgttgagtgattgtgataatattgtttaaaaagctagaa 33110319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 20949116 - 20949291
Alignment:
Q  1 gtttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaat-gtttgagaaatcgacatttaaacaatcc 99  Q
    |||||||| ||| ||||| | |||||||| | ||||||||| |||||||||||||||||| |  ||||||| ||||| ||||||||||||||||| ||||    
T  20949116 gtttttggatcaattaatagattggaaaatcatcgattaaatgatccaatcgactttgtggtcgtttaaatagtttgggaaatcgacatttaaacgatcc 20949215  T
Q  100 cttagaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||    
T  20949216 cttagaaataacgatatcatttggacacgaatgatattgttgagtgattgtgataatgtcgtttaaaaagctagaa 20949291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 3 - 169
Target Start/End: Complemental strand, 30218175 - 30218010
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    ||||||||| |||||| |||||| ||| | ||||||||| ||||||||||||||||||||  |||||||||||| |||||||||||||| || |||| ||    
T  30218175 ttttgggtcgtttaataggttgggaaatcatcgattaaa-gatccaatcgactttgtgatagtttaaatgtttgggaaatcgacatttagacgatccatt 30218077  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaag 169  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  30218076 agaaataacgatatcatttggacaggaatgatattgtcgagtgattgtgataatatcgtttaaaaag 30218010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 3 - 168
Target Start/End: Complemental strand, 21668694 - 21668529
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||| ||| |||||||||||||| ||| |||||||||||| |||||||||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  21668694 ttttaggtaatttaatcggttgggaaatcgtcgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 21668595  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaa 168  Q
    ||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||| ||||    
T  21668594 agaaataacgatatcatttggtcacgaatgatattttcgagtgattgtgataatatcgttttaaaa 21668529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 323811 - 323983
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| | |||||| || |||||||  |||||||||||| |||||| |  ||||||| |||||||    
T  323811 ttttgggtaatttaatcggttgggaaatcgtcgattaaactacccaatcaacgttgtgatcgtttaaatgtttgggaaatcaatgtttaaacgatccctt 323910  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  323911 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 323983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 53895749 - 53895916
Alignment:
Q  1 gtttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccc 100  Q
    ||||||||||| |||||| |||||| ||| |||| |||||||||||||||||||||||||||| |||||  ||||| ||||||||| |||||| | |||     
T  53895749 gtttttgggtcgtttaataggttgggaaatcgtctattaaacgatccaatcgactttgtgattgtttaatagtttgggaaatcgacttttaaatagtcca 53895848  T
Q  101 ttagaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaa 168  Q
    |||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  53895849 ttagaaatcacgacatcatttggacacgaatgatattgtcgagtgattgtgataatatcgtttaaaaa 53895916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 3 - 169
Target Start/End: Original strand, 52618875 - 52619041
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| ||||||||| | || ||| |||| ||||||| |||||||||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  52618875 ttttgggtaatttaatcgatcgggaaatcgtcaattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 52618974  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaag 169  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||    
T  52618975 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagattaaaaag 52619041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 35416485 - 35416313
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||  ||| |||| ||||||| |||||||||||||| ||||  |||||||||||| ||||||||  ||||||| | | |||    
T  35416485 ttttgggtaatttaatcggttgagaaatcgtcaattaaactatccaatcgactttatgatcgtttaaatgtttgggaaatcgatgtttaaacgacctctt 35416386  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||    
T  35416385 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatcgtttaacaagctagaa 35416313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 55327147 - 55327300
Alignment:
Q  1 gtttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccc 100  Q
    |||||||||| ||||||||||     ||| ||||| |||||| |||||||||||||||||||  |||||||||||| ||||||||  ||||||| |||||    
T  55327147 gtttttgggtaatttaatcggg----aaatcgtcggttaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccc 55327242  T
Q  101 ttagaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatat 158  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  55327243 ttagaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatat 55327300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 35 - 168
Target Start/End: Original strand, 42271781 - 42271914
Alignment:
Q  35 gattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatcccttagaaataacgatatcatttggacacgaatgat 134  Q
    |||||||| |||||||||||||||||||  |||||||||||| ||||||||  |||||||   |  |||||||||| |||||||||||||||||||||||    
T  42271781 gattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacggccttttagaaataatgatatcatttggacacgaatgat 42271880  T
Q  135 attgtagagtgattgtgataatatcgtttaaaaa 168  Q
    ||||| ||||||||||||||||||||||||||||    
T  42271881 attgtcgagtgattgtgataatatcgtttaaaaa 42271914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 33239375 - 33239462
Alignment:
Q  88 tttaaacaatcccttagaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  33239375 tttaaacaatcccttagaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 33239462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 175
Target Start/End: Original strand, 6640465 - 6640507
Alignment:
Q  133 atattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||| |||||||||||||||||||||||||||||| ||||    
T  6640465 atattgttgagtgattgtgataatatcgtttaaaaagctagaa 6640507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 175
Target Start/End: Complemental strand, 19731065 - 19731022
Alignment:
Q  132 gatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    |||||||| |||||||||||||||||| ||||||||||| ||||    
T  19731065 gatattgtcgagtgattgtgataatatagtttaaaaagctagaa 19731022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 121; Significance: 4e-62; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 32227031 - 32227203
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| |||||||||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  32227031 ttttgggtaatttaatcggttgggaaatcgtcgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 32227130  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||    
T  32227131 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatcatttaaaaagcaagaa 32227203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 11723065 - 11722893
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| | |||| ||||||||||||| |||||||||||| ||||||||  ||||||| |||||||    
T  11723065 ttttgggtaatttaatcggttgggaaatcgtcgattaaactacccaaacgactttgtgattgtttaaatgtttgggaaatcgatgtttaaacgatccctt 11722966  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  11722965 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 11722893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 3 - 170
Target Start/End: Complemental strand, 27166887 - 27166720
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||  ||| |||||||||||| |||||||||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  27166887 ttttgggtaatttaatcggttgagaaatcgtcgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 27166788  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagc 170  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  27166787 agaaataacaatatcatttggacacgaatgatattgtcgagtgattgtgataatatcgtttaaaaagc 27166720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 30606867 - 30606693
Alignment:
Q  1 gtttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccc 100  Q
    |||||||||| |||||||||||||| ||| |||||||||||| | |||| ||||||||||||  |||||||||||| |||||||| |||||||| ||| |    
T  30606867 gtttttgggtaatttaatcggttgggaaatcgtcgattaaactacccaaacgactttgtgatcgtttaaatgtttgggaaatcgatatttaaacgatctc 30606768  T
Q  101 ttagaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  30606767 ttagaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 30606693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 9404797 - 9404969
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| | |||| ||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  9404797 ttttgggtaatttaatcggttgggaaatcgtcgattaaactacccaaacgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 9404896  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  9404897 agaaataacgatatcatttggacacgaatgatattgttgagtgattgtgataatatagtttaaaaagctagaa 9404969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 24836095 - 24836267
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| | |||||||||||||||||  |||||||||||| ||||||||  ||||||  |||||||    
T  24836095 ttttgggtaatttaatcggttgggaaatcgtcgattaaactacccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaatgatccctt 24836194  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  24836195 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 24836267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 33434975 - 33435147
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| || ||||||||| | |||||||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  33434975 ttttgggtaatttaatcggttgggaaatcgacgattaaactacccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 33435074  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  33435075 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 33435147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 34456668 - 34456840
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| | |||| ||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  34456668 ttttgggtaatttaatcggttgggaaatcgtcgattaaactacccaaacgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 34456767  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  34456768 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 34456840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 37251694 - 37251522
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| ||||||||| |||| ||| |||||||||| | |||||||||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  37251694 ttttgggtaatttaatcgtttgggaaatcgtcgattaagctatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 37251595  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  37251594 agaaataacgatatcatttggacacgaatgatattgttgagtgattgtgataatatagtttaaaaagctagaa 37251522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 11767127 - 11767299
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| | |||||||| ||||||||  |||||||||||| ||||||||  ||||||| | |||||    
T  11767127 ttttgggtaatttaatcggttgggaaatcgtcgattaaactacccaatcgattttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgacccctt 11767226  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  11767227 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 11767299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 16904398 - 16904226
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| | |||||||||||||||||  |||||||||||| ||||||||  ||||||  |||||||    
T  16904398 ttttgggtaatttaatcggttgggaaatcgtcgattaaactacccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaatgatccctt 16904299  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||| ||||    
T  16904298 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagttttaaaagctagaa 16904226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 3 - 168
Target Start/End: Complemental strand, 34869535 - 34869369
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| | |||||||||  |||||||||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  34869535 ttttgggtaatttaatcggttgggaaatcctcgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 34869436  T
Q  103 -agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaa 168  Q
     ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  34869435 tagaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatcgtttaaaaa 34869369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 6270262 - 6270435
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaa-cgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccct 101  Q
    |||| ||| ||||||||||||||  ||| |||||||||||| |||||||||||||||||||  |||||||||||| ||||||||  ||||||  ||| ||    
T  6270262 tttttggtaatttaatcggttggggaaatcgtcgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaatgatctct 6270361  T
Q  102 tagaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  6270362 tagaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatcgtttaaaaagctagaa 6270435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 14344834 - 14345006
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| | |||| ||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  14344834 ttttgggtaatttaatcggttgggaaatcgtcgattaaactacccaaacgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 14344933  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    |||||||| ||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  14344934 agaaataaagatatcatttgaacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 14345006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 3 - 169
Target Start/End: Original strand, 7315577 - 7315743
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| | |||| ||||||||||||  |||||||||||| |||||| |  ||||||| ||| |||    
T  7315577 ttttgggtaatttaatcggttgggaaatcgtcgattaaactacccaaacgactttgtgatcgtttaaatgtttgggaaatcaatgtttaaacgatctctt 7315676  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaag 169  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  7315677 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaag 7315743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 519402 - 519530
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    ||||||||| |||||| |||||| |||  ||||||||||||||| |||| ||||||||||| |||||||||||| |||||||||| |||||| |||||||    
T  519402 ttttgggtcgtttaataggttgggaaattgtcgattaaacgatcaaatcaactttgtgattgtttaaatgtttgggaaatcgacaattaaacgatccctt 519501  T
Q  103 agaaataacgatatcatttggacacgaat 131  Q
    ||| |||||||||||||||||||||||||    
T  519502 agagataacgatatcatttggacacgaat 519530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 169
Target Start/End: Complemental strand, 39655825 - 39655659
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    ||||||||| |||||| | |||| ||| |||||||| |||||||| || |||||| ||||| |||||  ||||| ||||||||| ||| || | ||| ||    
T  39655825 ttttgggtcgtttaatagattgggaaatcgtcgattgaacgatccgattgactttctgattgtttaatagtttgggaaatcgacttttgaatagtccatt 39655726  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaag 169  Q
    |||||| |||| ||||||||||||| |||||| |||| ||||||||||||||||| |||||||||||    
T  39655725 agaaatcacgacatcatttggacacaaatgatgttgttgagtgattgtgataataccgtttaaaaag 39655659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 104 - 175
Target Start/End: Original strand, 31846426 - 31846497
Alignment:
Q  104 gaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  31846426 gaaataacgatattatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 31846497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 31846352 - 31846425
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttg 76  Q
    |||||||| |||||||||||||| ||| |||||||||||| | |||||||||||||||||  ||||||||||||    
T  31846352 ttttgggtaatttaatcggttgggaaatcgtcgattaaactacccaatcgactttgtgatcgtttaaatgtttg 31846425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 117; Significance: 1e-59; HSPs: 2)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 15763 - 15591
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| |||||||| ||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  15763 ttttgggtaatttaatcggttgggaaatcgtcgattaaactatccaatcaactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 15664  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  15663 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 15591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 11993 - 11821
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| |||||||| ||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  11993 ttttgggtaatttaatcggttgggaaatcgtcgattaaactatccaatctactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 11894  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||| ||||    
T  11893 agaaataacgatatcatttggacacgaatgatattgacgagtgattgtgataatatagtttaaaaagctagaa 11821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 3 - 169
Target Start/End: Complemental strand, 116357 - 116191
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||| | |||||||||||||| ||| |||||||||||| |||||||||||||||||||  |||||||||||| ||||||||  |||||||||||||||    
T  116357 ttttggataatttaatcggttgggaaatcgtcgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacaatccctt 116258  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaag 169  Q
    | ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  116257 aaaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatattgtttaaaaag 116191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 169197 - 169025
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| | |||||||||||| ||||  ||||||||||||  |||||||  ||||||  |||||||    
T  169197 ttttgggtaatttaatcggttgggaaatcgtcgattaaactacccaatcgactttttgatcgtttaaatgtttggaaaatcgatgtttaaatgatccctt 169098  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    |||||||||||||||||||||||||||| |||||| | |||||||||||||||||| ||||||||||| ||||    
T  169097 agaaataacgatatcatttggacacgaacgatattatcgagtgattgtgataatatagtttaaaaagctagaa 169025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 12277 - 12105
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| | |||||||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  12277 ttttgggtaatttaatcggttgggaaatcgtcgattaaactacccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 12178  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||| ||||    
T  12177 agaaataacgatatcatttggacacgaatgatattgtcaagtgattgtgataatatagtttaaaaagctagaa 12105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 28688 - 28516
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||||||| |||||||||||| | |||| ||||||||||||  ||||||||||||  |||||||  ||||||| |||||||    
T  28688 ttttgggtaatttaatcggttggaaaatcgtcgattaaactacccaaacgactttgtgatcgtttaaatgtttggaaaatcgatgtttaaacgatccctt 28589  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  28588 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 28516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 12567 - 12739
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| |||||||| ||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  12567 ttttgggtaatttaatcggttgggaaatcgtcgattaaactatccaatcaactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 12666  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||| ||||    
T  12667 agaaataacgatatcatttggacacgaatgatattgacgagtgattgtgataatatagtttaaaaagctagaa 12739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 9115 - 9287
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| | |||||||||||||||||  |||||||||||| ||||||||  | ||||  |||||||    
T  9115 ttttgggtaatttaatcggttgggaaatcgtcgattaaactacccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtctaaatgatccctt 9214  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  9215 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 9287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 7104 - 7276
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| | ||||| |||||||||| ||||||||||   |||||||||||||||||||  |||||||||||| ||||||||  ||||||| |||||||    
T  7104 ttttgggtaaattaattggttggaaaatcgtcgattaagttatccaatcgactttgtgatcttttaaatgtttgggaaatcgatgtttaaacgatccctt 7203  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||    
T  7204 agaaataacgatatcatttggacacgaatgatgttgtcgagtgattgtgataatatagtttaaaaagctagaa 7276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 25439 - 25267
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| | |||||||||| | ||| |||||||||||  ||||||||||||| |||||  |||||||||||| ||||||||  ||||||| |||||||    
T  25439 ttttgggtaaattaatcggtttggaaatcgtcgattaaattatccaatcgacttcgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctt 25340  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  25339 agaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaa 25267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 76241 - 76069
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||||| |||||||||||||| ||| |||||||||||| || ||||||||||||||||  |||||||  ||| |||||||   ||||||| |||||||    
T  76241 ttttgggtaatttaatcggttgggaaatcgtcgattaaactattcaatcgactttgtgatcgtttaaatcattgggaaatcgttgtttaaacgatccctt 76142  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||    
T  76141 agaaataacgatatcatttggacacgaatgatattgtctagtgattgtgataatatcgtttaaaaagctagaa 76069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 33 - 169
Target Start/End: Complemental strand, 16232 - 16096
Alignment:
Q  33 tcgattaaacgatccaatcgactttgtgattatttaaat-gtttgagaaatcgacatttaaacaatcccttagaaataacgatatcatttggacacgaat 131  Q
    ||||||||||||||||||||||||||||||  ||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||    
T  16232 tcgattaaacgatccaatcgactttgtgatcgtttaaatagtttgggaaatcgacatttaaacgatcccttagaaataacgatatcatttggacacaaat 16133  T
Q  132 gatattgtagagtgattgtgataatatcgtttaaaaag 169  Q
    |||||||| |||||||||||||||| ||||||||||||    
T  16132 gatattgttgagtgattgtgataat-tcgtttaaaaag 16096  T

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Target: scaffold0160 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 35112 - 34940
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||| |||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||  ||||| ||||||||| |||||| | ||| ||    
T  35112 tttttggtcatttaatcggttgggaaatcgtcgattaaacgatccgatcgactttgtgattatttaatagtttgggaaatcgacttttaaatagtccatt 35013  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    |||||| || | |||||||||||||||||||| ||||  ||||||||||||||||| ||||||||||| ||||    
T  35012 agaaatcacaacatcatttggacacgaatgatgttgtttagtgattgtgataatattgtttaaaaagctagaa 34940  T

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Target: scaffold0091 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 14558 - 14729
Alignment:
Q  3 ttttgggtcatttaatcggttggaaaaacgtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatccctt 102  Q
    |||||| || |||||| | |||||||| ||||||||||||||||||||||||||||||||| |||||  ||||| ||||||||| ||||||   ||| ||    
T  14558 ttttggatcgtttaatagattggaaaatcgtcgattaaacgatccaatcgactttgtgattgtttaatagtttgggaaatcgacttttaaatggtccatt 14657  T
Q  103 agaaataacgatatcatttggacacgaatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    | |||| |||| |||||||||||||||||||| |||| |||  ||||||||||||||||||||||||| ||||    
T  14658 ataaatcacgacatcatttggacacgaatgatgttgtcgag-aattgtgataatatcgtttaaaaagctagaa 14729  T

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Target: scaffold0859 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 32 - 168
Target Start/End: Complemental strand, 5107 - 4971
Alignment:
Q  32 gtcgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatcccttagaaataacgatatcatttggacacgaat 131  Q
    ||||||||||| |||||||| |||||||||   ||||||||||   ||||||||  ||||||  | | ||||||||||||||||||||||||||||||||    
T  5107 gtcgattaaactatccaatcaactttgtgaacgtttaaatgttaaggaaatcgatgtttaaatgacctcttagaaataacgatatcatttggacacgaat 5008  T
Q  132 gatattgtagagtgattgtgataatatcgtttaaaaa 168  Q
    |||||||| ||||||||||||||||||||||||||||    
T  5007 gatattgtcgagtgattgtgataatatcgtttaaaaa 4971  T

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Target: scaffold0515 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 175
Target Start/End: Original strand, 7255 - 7301
Alignment:
Q  129 aatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||    
T  7255 aatgatattgtcgagtgattgtgataatatcgtttaaaaagctagaa 7301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 175
Target Start/End: Original strand, 7265 - 7311
Alignment:
Q  129 aatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||    
T  7265 aatgatattgtcgagtgattgtgataatatcgtttaaaaagctagaa 7311  T

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Target: scaffold0152 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 175
Target Start/End: Original strand, 24876 - 24922
Alignment:
Q  129 aatgatattgtagagtgattgtgataatatcgtttaaaaagccagaa 175  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||    
T  24876 aatgatattgtcgagtgattgtgataatatcgtttaaaaagctagaa 24922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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