View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12750_high_23 (Length: 203)

Name: NF12750_high_23
Description: NF12750
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12750_high_23
NF12750_high_23
[»] chr4 (45 HSPs)
chr4 (4-199)||(56040570-56040765)
chr4 (4-199)||(22611173-22611368)
chr4 (13-199)||(53811027-53811213)
chr4 (4-199)||(24098991-24099186)
chr4 (4-203)||(4142672-4142874)
chr4 (4-192)||(26633602-26633790)
chr4 (4-199)||(13634105-13634300)
chr4 (4-200)||(53444108-53444304)
chr4 (4-199)||(21686166-21686360)
chr4 (4-199)||(32766504-32766699)
chr4 (4-199)||(10496325-10496520)
chr4 (4-196)||(8670475-8670667)
chr4 (4-195)||(19853440-19853631)
chr4 (4-199)||(56156566-56156761)
chr4 (13-203)||(54021859-54022049)
chr4 (45-202)||(21662469-21662625)
chr4 (45-202)||(21671233-21671389)
chr4 (4-198)||(17949249-17949443)
chr4 (4-198)||(17953101-17953295)
chr4 (4-199)||(35348297-35348492)
chr4 (4-199)||(33921041-33921239)
chr4 (23-199)||(2520788-2520964)
chr4 (4-199)||(43510187-43510381)
chr4 (45-203)||(10258816-10258973)
chr4 (9-199)||(9178348-9178538)
chr4 (23-199)||(43095637-43095813)
chr4 (1-129)||(40066048-40066177)
chr4 (6-158)||(26090878-26091033)
chr4 (71-199)||(29960873-29961000)
chr4 (4-140)||(11299976-11300110)
chr4 (1-175)||(52060870-52061045)
chr4 (11-159)||(52944305-52944457)
chr4 (11-199)||(12199617-12199805)
chr4 (4-108)||(5119329-5119434)
chr4 (1-159)||(28857386-28857548)
chr4 (15-203)||(37030262-37030450)
chr4 (4-124)||(44596654-44596773)
chr4 (45-159)||(22038765-22038879)
chr4 (111-199)||(45418610-45418697)
chr4 (23-160)||(48351148-48351287)
chr4 (65-159)||(27651996-27652090)
chr4 (99-157)||(47320377-47320435)
chr4 (126-199)||(29120303-29120375)
chr4 (4-64)||(29120421-29120482)
chr4 (111-160)||(31891249-31891298)
[»] chr8 (47 HSPs)
chr8 (4-199)||(23230615-23230810)
chr8 (4-199)||(20553163-20553358)
chr8 (1-198)||(7677206-7677403)
chr8 (4-199)||(37971255-37971450)
chr8 (9-199)||(7883163-7883353)
chr8 (4-199)||(17693536-17693731)
chr8 (9-199)||(10377666-10377856)
chr8 (4-197)||(20559668-20559861)
chr8 (4-197)||(20571230-20571423)
chr8 (16-198)||(40211225-40211407)
chr8 (4-199)||(45445733-45445928)
chr8 (4-199)||(3673413-3673608)
chr8 (4-199)||(14544825-14545020)
chr8 (17-199)||(25190987-25191171)
chr8 (43-199)||(31013530-31013685)
chr8 (4-196)||(16247148-16247340)
chr8 (43-203)||(33214589-33214748)
chr8 (1-160)||(40619033-40619193)
chr8 (1-160)||(36948397-36948557)
chr8 (11-198)||(5333405-5333595)
chr8 (43-199)||(28897721-28897876)
chr8 (17-203)||(27110383-27110569)
chr8 (71-199)||(29939340-29939467)
chr8 (23-195)||(9637335-9637507)
chr8 (50-195)||(24186587-24186730)
chr8 (83-199)||(16928679-16928794)
chr8 (4-199)||(28086734-28086930)
chr8 (23-151)||(29617243-29617375)
chr8 (23-199)||(5046744-5046920)
chr8 (23-203)||(27498284-27498462)
chr8 (10-159)||(471127-471277)
chr8 (4-157)||(8443474-8443631)
chr8 (106-199)||(30568243-30568335)
chr8 (4-157)||(1236660-1236816)
chr8 (4-157)||(1239360-1239516)
chr8 (67-154)||(18890665-18890752)
chr8 (23-157)||(15344297-15344434)
chr8 (23-157)||(15433362-15433499)
chr8 (23-157)||(15524666-15524803)
chr8 (4-104)||(41684397-41684498)
chr8 (74-159)||(42046264-42046349)
chr8 (112-196)||(7198120-7198203)
chr8 (23-155)||(3240368-3240504)
chr8 (112-159)||(39657535-39657582)
chr8 (31-199)||(33347443-33347610)
chr8 (9-72)||(8412451-8412515)
chr8 (111-159)||(14585757-14585805)
[»] chr5 (34 HSPs)
chr5 (4-199)||(38597766-38597961)
chr5 (9-199)||(24229708-24229898)
chr5 (4-199)||(9113649-9113844)
chr5 (4-199)||(13007198-13007393)
chr5 (4-199)||(25980127-25980321)
chr5 (1-199)||(6012062-6012260)
chr5 (4-196)||(35850768-35850960)
chr5 (4-199)||(31391677-31391872)
chr5 (9-199)||(26825404-26825594)
chr5 (28-195)||(34945386-34945553)
chr5 (9-199)||(7930151-7930341)
chr5 (9-203)||(41630476-41630670)
chr5 (4-199)||(11976859-11977054)
chr5 (4-199)||(14726385-14726580)
chr5 (26-199)||(38007349-38007522)
chr5 (4-199)||(6216868-6217062)
chr5 (9-159)||(11073863-11074014)
chr5 (1-199)||(8096422-8096619)
chr5 (8-199)||(10722734-10722925)
chr5 (23-199)||(13421921-13422097)
chr5 (4-201)||(19120879-19121078)
chr5 (43-199)||(26878032-26878187)
chr5 (23-120)||(11867656-11867754)
chr5 (31-159)||(7036215-7036344)
chr5 (59-203)||(15571511-15571654)
chr5 (60-196)||(1409524-1409659)
chr5 (104-199)||(14082320-14082414)
chr5 (65-157)||(2979271-2979363)
chr5 (111-203)||(28540826-28540917)
chr5 (1-82)||(14082413-14082495)
chr5 (65-159)||(14211258-14211352)
chr5 (11-95)||(37986140-37986225)
chr5 (45-199)||(35920920-35921073)
chr5 (111-160)||(19103429-19103478)
[»] chr1 (43 HSPs)
chr1 (4-199)||(5983809-5984004)
chr1 (4-199)||(21947542-21947737)
chr1 (4-199)||(45415531-45415726)
chr1 (43-203)||(31919001-31919161)
chr1 (4-199)||(34878202-34878397)
chr1 (1-199)||(7836720-7836918)
chr1 (10-199)||(14872619-14872807)
chr1 (1-199)||(7337587-7337785)
chr1 (4-199)||(1742254-1742447)
chr1 (4-199)||(10776385-10776580)
chr1 (4-198)||(35484316-35484510)
chr1 (4-196)||(23291569-23291761)
chr1 (23-199)||(3228261-3228437)
chr1 (4-199)||(8211835-8212029)
chr1 (4-195)||(32394971-32395162)
chr1 (50-195)||(29738592-29738736)
chr1 (9-108)||(11462462-11462562)
chr1 (1-199)||(44915609-44915807)
chr1 (1-134)||(27456510-27456644)
chr1 (4-159)||(21686846-21687002)
chr1 (4-194)||(27580057-27580247)
chr1 (4-124)||(940336-940456)
chr1 (4-194)||(35461978-35462156)
chr1 (28-129)||(36894262-36894365)
chr1 (1-190)||(51916599-51916783)
chr1 (125-199)||(4413209-4413282)
chr1 (4-119)||(50377301-50377417)
chr1 (99-203)||(15431586-15431689)
chr1 (4-195)||(31984151-31984325)
chr1 (11-160)||(47132880-47133033)
chr1 (113-199)||(16989454-16989539)
chr1 (4-104)||(15434893-15434994)
chr1 (4-199)||(13144736-13144931)
chr1 (84-160)||(49504557-49504633)
chr1 (45-199)||(24582966-24583118)
chr1 (65-159)||(36775673-36775767)
chr1 (23-157)||(49626903-49627040)
chr1 (67-159)||(37720112-37720204)
chr1 (45-160)||(16262876-16262991)
chr1 (1-47)||(30879064-30879110)
chr1 (65-159)||(48750220-48750314)
chr1 (114-199)||(44543356-44543440)
chr1 (115-199)||(31317821-31317904)
[»] chr7 (38 HSPs)
chr7 (4-198)||(12141233-12141427)
chr7 (9-199)||(37837382-37837572)
chr7 (4-195)||(8001474-8001665)
chr7 (4-195)||(30756747-30756938)
chr7 (4-199)||(48061394-48061589)
chr7 (9-199)||(47590288-47590478)
chr7 (4-199)||(19296842-19297037)
chr7 (4-199)||(9450061-9450256)
chr7 (4-199)||(48316736-48316931)
chr7 (4-198)||(34899532-34899726)
chr7 (4-203)||(24770218-24770417)
chr7 (4-191)||(39328722-39328909)
chr7 (4-199)||(42978582-42978777)
chr7 (9-199)||(39171514-39171704)
chr7 (4-199)||(38798753-38798948)
chr7 (4-199)||(19404681-19404876)
chr7 (4-199)||(45349723-45349918)
chr7 (4-199)||(13796853-13797051)
chr7 (23-195)||(46700026-46700198)
chr7 (23-195)||(5792787-5792959)
chr7 (4-142)||(9977186-9977325)
chr7 (9-199)||(25287110-25287300)
chr7 (65-199)||(40993191-40993324)
chr7 (50-203)||(28044676-28044828)
chr7 (9-176)||(3267163-3267326)
chr7 (1-119)||(26623792-26623912)
chr7 (23-199)||(39229006-39229181)
chr7 (67-160)||(35132983-35133076)
chr7 (11-177)||(25255206-25255373)
chr7 (45-159)||(38880541-38880655)
chr7 (53-150)||(11343832-11343929)
chr7 (111-159)||(24350802-24350850)
chr7 (65-160)||(22742978-22743073)
chr7 (23-148)||(5348566-5348692)
chr7 (65-155)||(28476261-28476351)
chr7 (78-150)||(28062195-28062267)
chr7 (100-203)||(4999949-5000051)
chr7 (43-159)||(4530088-4530204)
[»] chr6 (28 HSPs)
chr6 (4-199)||(7515126-7515321)
chr6 (4-199)||(33053092-33053287)
chr6 (4-199)||(3913498-3913693)
chr6 (4-199)||(34018531-34018726)
chr6 (4-199)||(606175-606370)
chr6 (1-199)||(23128586-23128784)
chr6 (4-195)||(29319806-29319997)
chr6 (9-199)||(32327141-32327331)
chr6 (4-199)||(127641-127835)
chr6 (28-199)||(30894595-30894765)
chr6 (43-199)||(12170479-12170634)
chr6 (1-203)||(3355085-3355287)
chr6 (17-199)||(29255370-29255551)
chr6 (18-199)||(30608439-30608619)
chr6 (4-195)||(67929-68120)
chr6 (44-130)||(11321461-11321547)
chr6 (1-203)||(26588392-26588597)
chr6 (23-195)||(4010440-4010611)
chr6 (65-199)||(8102759-8102892)
chr6 (11-60)||(20220856-20220906)
chr6 (11-60)||(22114840-22114890)
chr6 (4-176)||(24227678-24227851)
chr6 (112-159)||(546111-546158)
chr6 (57-199)||(528274-528415)
chr6 (111-155)||(14801906-14801950)
chr6 (83-199)||(20225902-20226017)
chr6 (83-199)||(22119886-22120001)
chr6 (4-63)||(13546722-13546782)
[»] chr2 (54 HSPs)
chr2 (4-199)||(37876531-37876726)
chr2 (10-196)||(5427797-5427982)
chr2 (1-199)||(18763445-18763643)
chr2 (9-198)||(7448232-7448421)
chr2 (4-199)||(1415537-1415732)
chr2 (4-199)||(1421656-1421851)
chr2 (4-199)||(4778733-4778928)
chr2 (4-199)||(36943046-36943241)
chr2 (4-199)||(38445146-38445341)
chr2 (23-196)||(33923704-33923877)
chr2 (4-199)||(31788437-31788631)
chr2 (10-203)||(4904066-4904259)
chr2 (4-195)||(7677802-7677993)
chr2 (4-199)||(27097332-27097526)
chr2 (7-199)||(31128705-31128897)
chr2 (4-199)||(31210532-31210727)
chr2 (4-199)||(7646453-7646653)
chr2 (4-198)||(43397044-43397239)
chr2 (23-193)||(8809279-8809449)
chr2 (4-199)||(11985158-11985350)
chr2 (4-199)||(9169183-9169378)
chr2 (4-199)||(36691854-36692049)
chr2 (9-199)||(4041519-4041709)
chr2 (4-199)||(19028839-19029034)
chr2 (4-195)||(19062281-19062472)
chr2 (43-198)||(33585661-33585815)
chr2 (9-199)||(39310778-39310967)
chr2 (4-149)||(35220305-35220451)
chr2 (4-160)||(30399998-30400155)
chr2 (17-199)||(25508993-25509175)
chr2 (43-174)||(28871737-28871868)
chr2 (11-150)||(42698674-42698814)
chr2 (4-194)||(29173650-29173839)
chr2 (4-199)||(29279495-29279690)
chr2 (4-100)||(4099083-4099180)
chr2 (83-194)||(12677380-12677490)
chr2 (4-157)||(32448585-32448741)
chr2 (45-151)||(41327525-41327631)
chr2 (45-195)||(41694644-41694792)
chr2 (11-199)||(12554106-12554294)
chr2 (11-161)||(29574590-29574744)
chr2 (11-145)||(34128662-34128800)
chr2 (9-203)||(17249068-17249264)
chr2 (68-159)||(10237180-10237271)
chr2 (65-159)||(3308987-3309081)
chr2 (24-109)||(4264472-4264558)
chr2 (11-159)||(10929648-10929801)
chr2 (50-150)||(11833504-11833604)
chr2 (50-158)||(24461470-24461578)
chr2 (1-43)||(12648004-12648046)
chr2 (65-159)||(14423367-14423461)
chr2 (23-88)||(18107782-18107848)
chr2 (58-159)||(23933583-23933684)
chr2 (95-131)||(4100417-4100453)
[»] scaffold0017 (1 HSPs)
scaffold0017 (4-199)||(32671-32866)
[»] chr3 (59 HSPs)
chr3 (12-199)||(21533733-21533920)
chr3 (4-198)||(12050573-12050767)
chr3 (4-199)||(9998436-9998631)
chr3 (4-199)||(10233039-10233234)
chr3 (9-199)||(10229450-10229640)
chr3 (4-199)||(10108205-10108400)
chr3 (4-199)||(36461355-36461550)
chr3 (4-199)||(40487294-40487489)
chr3 (4-199)||(6954620-6954815)
chr3 (4-199)||(38545768-38545963)
chr3 (4-199)||(52923041-52923236)
chr3 (9-199)||(33579854-33580044)
chr3 (10-199)||(47896127-47896316)
chr3 (4-199)||(48650658-48650853)
chr3 (4-199)||(45568369-45568564)
chr3 (4-199)||(38860036-38860239)
chr3 (4-199)||(54148960-54149155)
chr3 (24-199)||(9797458-9797633)
chr3 (9-149)||(12149757-12149898)
chr3 (58-199)||(46304444-46304584)
chr3 (4-195)||(43488518-43488709)
chr3 (44-203)||(7448834-7448992)
chr3 (44-203)||(7456976-7457134)
chr3 (10-194)||(43016830-43017014)
chr3 (4-199)||(23799834-23800029)
chr3 (4-199)||(47041972-47042168)
chr3 (4-203)||(20608819-20609018)
chr3 (9-199)||(18010994-18011184)
chr3 (4-159)||(32701462-32701616)
chr3 (4-199)||(40556681-40556866)
chr3 (4-199)||(19339145-19339339)
chr3 (55-199)||(21431634-21431777)
chr3 (9-119)||(36910643-36910755)
chr3 (23-199)||(45424787-45424962)
chr3 (4-160)||(35864894-35865051)
chr3 (4-193)||(20987729-20987918)
chr3 (23-196)||(45425580-45425753)
chr3 (18-199)||(53099773-53099954)
chr3 (1-197)||(20464896-20465092)
chr3 (4-122)||(44959952-44960071)
chr3 (23-199)||(21313024-21313200)
chr3 (50-199)||(26275743-26275891)
chr3 (23-199)||(37040757-37040933)
chr3 (11-159)||(14859466-14859615)
chr3 (4-159)||(31271772-31271926)
chr3 (65-159)||(51923758-51923852)
chr3 (1-150)||(29239306-29239459)
chr3 (44-160)||(29922067-29922183)
chr3 (44-160)||(29971220-29971336)
chr3 (111-199)||(42460826-42460913)
chr3 (44-199)||(48199787-48199941)
chr3 (111-159)||(51303606-51303654)
chr3 (104-199)||(19619784-19619877)
chr3 (111-155)||(8914789-8914833)
chr3 (111-159)||(16235503-16235551)
chr3 (4-157)||(53807823-53807979)
chr3 (136-199)||(4711584-4711646)
chr3 (63-114)||(46220699-46220750)
chr3 (65-159)||(21289777-21289871)
[»] scaffold0127 (1 HSPs)
scaffold0127 (9-199)||(15466-15657)
[»] scaffold0445 (1 HSPs)
scaffold0445 (4-199)||(1314-1509)
[»] scaffold0884 (1 HSPs)
scaffold0884 (1-199)||(1897-2095)
[»] scaffold0050 (1 HSPs)
scaffold0050 (4-199)||(65966-66161)
[»] scaffold0136 (1 HSPs)
scaffold0136 (4-199)||(9966-10161)
[»] scaffold0634 (1 HSPs)
scaffold0634 (9-149)||(8487-8628)
[»] scaffold0026 (1 HSPs)
scaffold0026 (4-159)||(71827-71983)
[»] scaffold0088 (1 HSPs)
scaffold0088 (43-199)||(50786-50941)
[»] scaffold0262 (1 HSPs)
scaffold0262 (35-199)||(1743-1907)
[»] scaffold0121 (1 HSPs)
scaffold0121 (16-195)||(31202-31381)
[»] scaffold0049 (1 HSPs)
scaffold0049 (4-159)||(71263-71419)
[»] scaffold0603 (1 HSPs)
scaffold0603 (11-159)||(7693-7842)
[»] scaffold0154 (1 HSPs)
scaffold0154 (51-200)||(25308-25456)
[»] scaffold0128 (1 HSPs)
scaffold0128 (16-199)||(36812-36990)
[»] scaffold0042 (1 HSPs)
scaffold0042 (45-159)||(92459-92573)
[»] scaffold0009 (1 HSPs)
scaffold0009 (50-160)||(58050-58160)


Alignment Details
Target: chr4 (Bit Score: 149; Significance: 7e-79; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 56040765 - 56040570
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  56040765 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtttaattttgcgtcttgtcgcagtgtttgtttagttcctattggaagatctacatca 56040666  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||   ||||| |||||||||| ||||||||||||||||||||    
T  56040665 gtcaattacaaattcaaccaatgatttgggcggcaacgttgcagatccagaagcatgggtatttcggtgacttagg-ttttatcatattatttgtag 56040570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 22611173 - 22611368
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| ||||||||||||||||||||| ||||| |||| |||| ||||||||||||||||| ||||||||||| |||||||||||||    
T  22611173 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgattttgcgttttgtcgcggtgtttgttcagttcctattgaaagatctacatca 22611272  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| |||||||||||||| |||||| || ||||||||||||||| |||||||||  ||||| |||||||| | ||||||||||||||||||||    
T  22611273 gtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaag-ttttatcatattatttgtag 22611368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 53811027 - 53811213
Alignment:
Q  13 tgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgc 111  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||| ||||||| ||||||||||| |||||||||||||||||||| |    
T  53811027 tgcggcgttttgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcgcggggtttgttcagttcctattgaaagatctacatcagtcaattac 53811126  T
Q  112 aaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||||||||| |||||| || ||||||||||||||| |||||||||  ||||| |||||||| | ||||||||||||||||||||    
T  53811127 aaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaag-ttttatcatattatttgtag 53811213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 24099186 - 24098991
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| |||||||||| |||||||||||||||||||||||| || || ||||||||||||||||||| ||||||| ||||||||||| |||||||||||||    
T  24099186 tcgtctaagtgcggcattttgttgttcgtcgtcttgtgcggcgattgatttcgcgtcttgtcgcggagtttgttcagttcctattgaaagatctacatca 24099087  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
     |||||| ||||||||| |||| |||||| || ||||||||||||||| ||| ||||   |||||||||||||||| ||||||||||||||||||||    
T  24099086 atcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaaacatgggtatttcagtgacttagg-ttttatcatattatttgtag 24098991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 4 - 203
Target Start/End: Complemental strand, 4142874 - 4142672
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg----cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctaca 99  Q
    |||| ||||||||||||| |||||||||||||||||||||    ||||| |||||| || ||||||||||||||||| | ||||| ||| ||||||||||    
T  4142874 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcggcgtttgatttcgtgttttgtcgcggtgtttgttcaattcctcttgaaagatctaca 4142775  T
Q  100 tcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    |||||||||| |||||||||||||| |||||| || ||||||||||||||||||| |||||  ||||| |||||||| | ||||||||||||||||||||    
T  4142774 tcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccagaaacatgagtatttcggtgacttaag-ttttatcatattatttgtag 4142676  T
Q  200 acat 203  Q
    ||||    
T  4142675 acat 4142672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 4 - 192
Target Start/End: Complemental strand, 26633790 - 26633602
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| ||||||||||||||||||||| | ||  | ||||||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  26633790 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcattggacttcgcgtcttgtcgcagtgtttgttcagttcctattgaaagatctacatca 26633691  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatatta 192  Q
    ||| ||| |||||||||||||| |||||| || ||| ||||||||||| |||||||||| ||||| |||||||||| |||||||||||||    
T  26633690 gtcgattacaaattcaaccaatgatttggacgtcaatgttgcagatccggaagcatgaatatttctgtgacttagg-ttttatcatatta 26633602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 13634105 - 13634300
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcgcgttta-atttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| ||||||||||||||||||||| | ||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  13634105 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgaggttagatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctacatca 13634204  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
     |||||| ||||||||| |||  |||||| || ||||||||||||||| ||| ||||   |||||||||| ||||| ||||||| ||||||||||||    
T  13634205 atcaattacaaattcaagcaacgatttggacgtcaacgttgcagatccggaaacatgggtatttcagtgatttagg-ttttatcttattatttgtag 13634300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 4 - 200
Target Start/End: Original strand, 53444108 - 53444304
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcgcg-tttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||| || |||| |||||||||||||||||||||   ||| ||||||||| ||||||||||||||||||| ||||||||| ||||||  |||||    
T  53444108 tcgtctaagtacgacgttgtgttgttcgtcgtcttgtgcggtatttgatttcgcgttttgtcgcggtgtttgtttatttcctattgaaagatcggcatca 53444207  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtaga 200  Q
    ||||||| |||||||||||||| ||||||||| ||| |||| |||||| ||||||||  |||||| |||||||||| |||||||||||||||||||||    
T  53444208 gtcaattacaaattcaaccaatgatttgggcgtcaatgttgaagatccggaagcatgtgaatttcggtgacttagg-ttttatcatattatttgtaga 53444304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 21686360 - 21686166
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| |||||||||||| | |||||||||||||||||||| ||||| ||||||||||||| ||||||||||||| ||||||||||| |||||||||||||    
T  21686360 tcgtctaagtgcggcgtgt-gttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttgccgcggtgtttgttcagttcctattgaaagatctacatca 21686262  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
     ||| || ||||||||| |||| |||||| || ||||||||||||||| |||||||||  ||||  |||| ||||| ||||||||||||||||||||    
T  21686261 atcagttacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgagtattttggtgatttagg-ttttatcatattatttgtag 21686166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 32766504 - 32766699
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||| ||| ||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||| ||||||||||  |||||||||||||    
T  32766504 tcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcgcggtgtttgttcagttcctattaaaagatctacatca 32766603  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| ||||||||| |||| |||||| || ||| ||||||||||| ||| ||||   ||||| |||||||| | ||||||||||||||||||||    
T  32766604 gtcaattacaaattcaatcaatgatttggacgtcaatgttgcagatccggaaacatgggtatttcggtgacttaag-ttttatcatattatttgtag 32766699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 10496325 - 10496520
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||| | ||||||||||||||||||| | ||||| |||| |||||||||||| ||||| ||||||||||||||| ||||||  |||||    
T  10496325 tcgtgtaagtgcggcgatgtgttgttcgtcgtcttgtgtgacgtttgattttgcgtcttgtcgcagtgttcgtttagttcctattgaaagatcggcatca 10496424  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| |||||||||||||| ||||||||| |||| ||||||||||  |||||||   ||||| |||| ||||| ||||||||||||||||||||    
T  10496425 gtcaattacaaattcaaccaatgatttgggcgtcaactttgcagatccgtaagcatgggtatttcggtgagttagg-ttttatcatattatttgtag 10496520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 4 - 196
Target Start/End: Original strand, 8670475 - 8670667
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcgc-gtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| ||||||| ||| |||||||||  |||| |||||||| |||||||||||||| ||||| ||||||||| ||||||  |||||    
T  8670475 tcgtgtaagtgcggcgttgtgttgttagtcatcttgtgcggtgtttgatttcgcgacttgtcgcggtgttcgtttatttcctattgaaagatcggcatca 8670574  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 196  Q
    ||||||| |||||||||||||| ||||||||| |||||||| ||||||  |||||||  |||||| ||||||||||  ||||||||||||||||    
T  8670575 gtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccgaaagcatgtgaatttcggtgacttagg-atttatcatattatttg 8670667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 4 - 195
Target Start/End: Complemental strand, 19853631 - 19853440
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| |||||||||||||||| || | | ||| |||| |||| || || ||||||||||| ||||||||||| |||||||||||||    
T  19853631 tcgtctaagtgcggcgttgtgttgttcgtcgtcttatgtggcatttgattttgcgttttatcacggtgtttgttcagttcctattgaaagatctacatca 19853532  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattattt 195  Q
     |||||| |||||||||||||| |||||| || ||||||||||||||| |||||||| | ||||| |||||||| | ||||||||||||||||    
T  19853531 ctcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatggatatttcggtgacttaag-ttttatcatattattt 19853440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 56156761 - 56156566
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| |||||| |||||| ||||||||||||||||||| | ||||| ||||||||||||||||||||||| ||||||||||| ||| |||||  ||||||    
T  56156761 tcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgtggcgtttgatttcgcgtcttgtcgcggtgttcgtttagttcctcttgaaagattaacatca 56156662  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| |||||||||||||| ||| ||||| |||| |||||||||  ||||||||  |||||| |||||||| | ||||||||  ||||||||||    
T  56156661 gtcaattacaaattcaaccaatgattggggcgtcaacattgcagatctggaagcatgtgaatttcggtgacttatg-ttttatcaatttatttgtag 56156566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 13 - 203
Target Start/End: Original strand, 54021859 - 54022049
Alignment:
Q  13 tgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgc 111  Q
    |||||| || ||||||| ||||||||||||| ||||| |||||| |||||||||||||||| ||||||||||||||| |||||| ||||||||||||| |    
T  54021859 tgcggcattgtgttgttagtcgtcttgtgcggcgtttgatttcgtgtcttgtcgcggtgttcgtttagttcctattgaaagatcgacatcagtcaattac 54021958  T
Q  112 aaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacat 203  Q
    ||||| || |||| ||||||  | |||||||||||||||  || |||| | ||||| |||||||| | ||||||||||||||||||||||||    
T  54021959 aaattgaatcaatgatttggatgtcaacgttgcagatccgaaaacatggatatttcggtgactta-gattttatcatattatttgtagacat 54022049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 45 - 202
Target Start/End: Original strand, 21662469 - 21662625
Alignment:
Q  45 gtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgc 144  Q
    |||| |||||||||||||||||||| || ||||||||||||||| |||||| ||||||||||||| ||||| ||| |||| ||||| ||| |||||||||    
T  21662469 gtttgatttcgcgtcttgtcgcggtattcgtttagttcctattgaaagatcaacatcagtcaattacaaatccaatcaatgatttgagcgtcaacgttgc 21662568  T
Q  145 agatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagaca 202  Q
    |||||| ||||||||   ||||| |||||||||| |||||||||||||||||||||||    
T  21662569 agatccggaagcatgggtatttcggtgacttagg-ttttatcatattatttgtagaca 21662625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 45 - 202
Target Start/End: Original strand, 21671233 - 21671389
Alignment:
Q  45 gtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgc 144  Q
    |||| |||||||||||||||||||| || ||||||||||||||| |||||| ||||||||||||| ||||| ||| |||| ||||| ||| |||||||||    
T  21671233 gtttgatttcgcgtcttgtcgcggtattcgtttagttcctattgaaagatcaacatcagtcaattacaaatccaatcaatgatttgagcgtcaacgttgc 21671332  T
Q  145 agatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagaca 202  Q
    |||||| ||||||||   ||||| |||||||||| |||||||||||||||||||||||    
T  21671333 agatccggaagcatgggtatttcggtgacttagg-ttttatcatattatttgtagaca 21671389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 4 - 198
Target Start/End: Complemental strand, 17949443 - 17949249
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| ||||||| ||||| ||||||| ||||| |||| |||| ||||||||||||| ||||| ||||||||| |||||||||||||    
T  17949443 tcgtctaagtgcggcgttgtgttgtttgtcgtgttgtgcggcgtttgattttgcgttttgtcgcggtgttcgtttaattcctattgaaagatctacatca 17949344  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgta 198  Q
    ||||||| |||||||||||||| ||| | ||| ||||||||||||||| |||| |||   ||||   ||||||||| |||||||||||||| ||||    
T  17949343 gtcaattacaaattcaaccaatgattggagcgtcaacgttgcagatccggaagaatgggtattttgatgacttagg-ttttatcatattatatgta 17949249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 4 - 198
Target Start/End: Complemental strand, 17953295 - 17953101
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| ||||||| ||||| ||||||| ||||| |||| |||| ||||||||||||| ||||| ||||||||| |||||||||||||    
T  17953295 tcgtctaagtgcggcgttgtgttgtttgtcgtgttgtgcggcgtttgattttgcgttttgtcgcggtgttcgtttaattcctattgaaagatctacatca 17953196  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgta 198  Q
    ||||||| |||||||||||||| ||| | ||| ||||||||||||||| |||| |||   ||||   ||||||||| |||||||||||||| ||||    
T  17953195 gtcaattacaaattcaaccaatgattggagcgtcaacgttgcagatccggaagaatgggtattttgatgacttagg-ttttatcatattatatgta 17953101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 35348297 - 35348492
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||  |||||| | |||||| |||||||| |||||| ||||||  |   |    
T  35348297 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgtttcttgttgtggtgttcgtttagttactattgaaagatcggcgata 35348396  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| |||||||||||||| || |||  | ||||||||||||||| ||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  35348397 gtcaattacaaattcaaccaatgatctggatgtcaacgttgcagatccggaagcatgtgaatttcaatgacttagg-ttttatcatattatttgtag 35348492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 33921041 - 33921239
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| ||||||||| |||||| |||| ||||| ||||| ||||||||||| ||||| ||||||||||||||| |||||| |||||     
T  33921041 tcgtctaagtgcggcgttgtgttgttcgccgtcttatgcgacgtttgatttcacgtcttgtcgcagtgttcgtttagttcctattgaaagatcgacatc- 33921139  T
Q  103 gtcaatt----gcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgta 198  Q
    |||||||     ||||||||| |||| ||||| ||| ||||||||||||||| ||||||||   |||||||||||||| | |||||||||||||||||||    
T  33921140 gtcaattacaaacaaattcaatcaataatttgagcgtcaacgttgcagatccggaagcatgggtatttcagtgactta-gattttatcatattatttgta 33921238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 199
Target Start/End: Original strand, 2520788 - 2520964
Alignment:
Q  23 tgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaacc 121  Q
    ||||||||||||||||||||| ||||| ||||||||| |||||||| |||||||| | ||||||||| ||||||||||||| |||||| |||||| || |    
T  2520788 tgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcgcgatgtttgttcaattcctattgaaagatctacatcaatcaattacaaattaaagc 2520887  T
Q  122 aattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||| |||||| || ||||||||||||||| ||||||||   ||||| |||| ||| | ||||||| ||||||||||||    
T  2520888 aatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgattta-gattttatcgtattatttgtag 2520964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 43510187 - 43510381
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| |||| || ||||||||||||| ||||| |||||| || ||||||||||||||||| | ||||| ||| |||||||||||||    
T  43510187 tcgtctaagtgcggcgttgtgttatttgtcgtcttgtgcggcgtttgatttcgtgttttgtcgcggtgtttgttcaattcctcttgaaagatctacatca 43510286  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||| ||| |||||| ||| ||| |||||| || ||| ||||||||||| ||||||||   ||||| |||||||| | ||||||||||||||||||||    
T  43510287 gtc-attacaaattaaactaatgatttggacgtcaatgttgcagatcctgaagcatgggtatttcggtgacttaag-ttttatcatattatttgtag 43510381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 45 - 203
Target Start/End: Complemental strand, 10258973 - 10258816
Alignment:
Q  45 gtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgc 144  Q
    |||| ||||||||||||| ||||||||| ||||||||| | ||| |||||| |||| |||||||| ||||||||| |||| ||||||||| |||||||||    
T  10258973 gtttgatttcgcgtcttgacgcggtgttcgtttagttcatgttgaaagatcgacattagtcaattacaaattcaatcaatgatttgggcgccaacgttgc 10258874  T
Q  145 agatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacat 203  Q
    | | || |||||||||| ||||  |||||||| | ||||||||||||||||||||||||    
T  10258873 atacccggaagcatgaatattttggtgactta-gattttatcatattatttgtagacat 10258816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 9178348 - 9178538
Alignment:
Q  9 taagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaa 107  Q
    |||||||| |||| | ||||||||| ||||||| | ||||| |||||||||||||||||| |||| ||||||||||||||| |||||| |||||| ||||    
T  9178348 taagtgcgacgttgtattgttcgtcatcttgtgtggcgtttgatttcgcgtcttgtcgcgttgttcgtttagttcctattgaaagatcgacatcaatcaa 9178447  T
Q  108 ttgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    || ||||| ||| |||| ||||| ||  ||||||||||||||  ||||||  |  ||||||| ||||| || ||||||||||||||||||||    
T  9178448 ttacaaatccaatcaataatttgagcatcaacgttgcagatctggaagcaaaagtatttcagagacttcgg-ttttatcatattatttgtag 9178538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 23 - 199
Target Start/End: Original strand, 43095637 - 43095813
Alignment:
Q  23 tgttgttcgtcgtcttgtgcgc-gtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaacc 121  Q
    ||||||| |||||||||| ||  |||| ||||||||||||||| || ||||  ||||||||||||||||||||| ||||||||||||| ||| || || |    
T  43095637 tgttgttagtcgtcttgtacggtgtttgatttcgcgtcttgtcacgatgttcatttagttcctattggaagatcgacatcagtcaattacaagttaaatc 43095736  T
Q  122 aattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||| |||||| || ||||  ||||||||| ||||||||| ||||||| ||||||| | ||||||||||| ||||||||    
T  43095737 aatgatttggccgtcaacagtgcagatccggaagcatgagaatttcactgactta-gattttatcatatcatttgtag 43095813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 40066177 - 40066048
Alignment:
Q  1 tcatcgtttaagtgcggcgttttgttgttcgtcgtcttgtgc-gcgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctaca 99  Q
    ||||||| ||||||||||||| |||||||||||||||| ||| |||||| ||||||| |||||||||| | ||||||||||| |||| | |||||| |||    
T  40066177 tcatcgtctaagtgcggcgttgtgttgttcgtcgtcttatgcagcgtttgatttcgcctcttgtcgcgatatttgtttagtttctatggaaagatcgaca 40066078  T
Q  100 tcagtcaattgcaaattcaaccaattattt 129  Q
    | | |||||| ||||||||| |||| ||||    
T  40066077 ttaatcaattacaaattcaatcaataattt 40066048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 6 - 158
Target Start/End: Complemental strand, 26091033 - 26090878
Alignment:
Q  6 gtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttc--gcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||||| ||||||||| ||||||||| ||| ||||||| ||||| ||||   ||||||| || ||||||| ||||||||| | ||| |||||| ||||||    
T  26091033 gtttaaatgcggcgttctgttgttcgccgttttgtgcggcgtttgattttttgcgtcttatcacggtgttcgtttagttcatcttgaaagatcgacatca 26090934  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcat 158  Q
    |||||||  ||||||||| ||| ||||||||| |||||||||| || | |||||||    
T  26090933 gtcaattataaattcaactaatgatttgggcgtcaacgttgcaaattcggaagcat 26090878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 71 - 199
Target Start/End: Complemental strand, 29961000 - 29960873
Alignment:
Q  71 tttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagt 170  Q
    |||||||||||| ||||| ||||||||||||| ||||||  |||||||||| || |||| |||  ||||||||||||||| ||| ||| || |||| |||    
T  29961000 tttgtttagttcgtattgaaagatctacatcaatcaattataaattcaaccgatgattttggcatcaacgttgcagatccggaaacataaatattttagt 29960901  T
Q  171 gacttaggcttttatcatattatttgtag 199  Q
    || ||| | |||||||||| |||||||||    
T  29960900 gattta-gattttatcatactatttgtag 29960873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 140
Target Start/End: Complemental strand, 11300110 - 11299976
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgc-gcgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||| ||| ||||||||||||||||||||  ||||| |||||||||||||||||||||||  || | || |||||| |||||   || ||    
T  11300110 tcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcaacgtttgatttcgcgtcttgtcgcggtgttcattcattttctattgaaagat---cagca 11300014  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacg 140  Q
    ||| ||| ||||||||| |||| ||||||||| |||||    
T  11300013 gtcgattacaaattcaaacaatgatttgggcgtcaacg 11299976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 52061045 - 52060870
Alignment:
Q  1 tcatcgtttaagtgcggcgttttgttgttcgtcgtcttgtgc-gcgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctaca 99  Q
    ||||||| |||||| ||| || || ||||||||||||||| | |||||| |||  | ||||||| | |||||| ||||| ||||||||| |||||| ||     
T  52061045 tcatcgtctaagtgtggcattgtgatgttcgtcgtcttgtacggcgtttgattatgtgtcttgttgaggtgttcgtttaattcctattgaaagatcaact 52060946  T
Q  100 tcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgactt 175  Q
    |||||||||| || |||||| |||| |||||||||   | |||| ||||| ||||||||| | |||||| ||||||    
T  52060945 tcagtcaattacagattcaatcaatgatttgggcgttgatgttgtagatctagaagcatggatatttcaatgactt 52060870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 159
Target Start/End: Original strand, 52944305 - 52944457
Alignment:
Q  11 agtgcggcgttttgttgttcgtcgtcttgtgcg----cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtca 106  Q
    ||||||||||| ||||||||||||| |||||||     ||||||||| ||||||||| |||||||| ||||  ||| ||||| ||||||  | |||||||    
T  52944305 agtgcggcgttgtgttgttcgtcgttttgtgcggcgttgtttaattttgcgtcttgttgcggtgttcgtttgtttcatattgaaagatcagcttcagtca 52944404  T
Q  107 attgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatg 159  Q
    ||  || |||||| | || |||||| || ||||||||||||||| ||||||||    
T  52944405 atcacagattcaatcgatgatttggacgtcaacgttgcagatccggaagcatg 52944457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 12199805 - 12199617
Alignment:
Q  11 agtgcggcgttttgttgttcgtcgtcttgtgc-gcgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaatt 109  Q
    |||| |||||| |||||||| |||| |||||| || ||| |||| ||||||||| |||||||| ||||||||| ||||| || ||| || ||||||| ||    
T  12199805 agtgtggcgttgtgttgttcatcgttttgtgcagcttttgattttgcgtcttgttgcggtgttcgtttagttcatattgaaatatcaacttcagtcagtt 12199706  T
Q  110 gcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
     || |||||| |||  ||||| ||| | ||||| ||||| | ||||||||| |||||  | |||||||  ||| ||||||||||||||||    
T  12199705 acagattcaatcaaagatttgagcgtcgacgttacagattcggaagcatgagaattttggcgacttagaattt-atcatattatttgtag 12199617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 5119329 - 5119434
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| |||||||||  || |||||||||| ||||| |||| ||||| |||| | ||||| |||||||||| ||||||||||||||| |||||| ||||||    
T  5119329 tcgtctaagtgcggtattgtgttgttcgttgtcttttgcggcgtttgattttgtgtcttatcgcggtgttcgtttagttcctattgaaagatcgacatca 5119428  T
Q  103 gtcaat 108  Q
     |||||    
T  5119429 atcaat 5119434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 28857386 - 28857548
Alignment:
Q  1 tcatcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg----cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatct 96  Q
    ||||||| ||||||||||||| |||||||||| ||||||||||     |||| ||| ||||||| || |||||||| ||||  ||| ||||| ||||||     
T  28857386 tcatcgtctaagtgcggcgttgtgttgttcgttgtcttgtgcggcgttgtttgattccgcgtctagttgcggtgttcgtttgtttcatattgaaagatca 28857485  T
Q  97 acatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatg 159  Q
     | |||||||||  || ||||||   || |||||| || ||||||| ||||||| ||||||||    
T  28857486 gcttcagtcaatcacatattcaattgatgatttggacgccaacgtttcagatccggaagcatg 28857548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 203
Target Start/End: Original strand, 37030262 - 37030450
Alignment:
Q  15 cggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaa 113  Q
    ||||||| ||||||||||||||||||  | ||||| |||||  |||||||||||||||  |||| ||| ||||   |||||| || ||| |||| | ||     
T  37030262 cggcgttgtgttgttcgtcgtcttgtatggcgtttgatttcatgtcttgtcgcggtgtacgtttggtttctatcaaaagatcaacttcaatcaaatacag 37030361  T
Q  114 attcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacat 203  Q
    |||||| |||| |||||| |  | |||||||||||| | || ||||   |||||||||||||| |   ||||||||||||||||||||||    
T  37030362 attcaatcaatgatttggacatcgacgttgcagatcgaaaaacatgggtatttcagtgactta-gaaattatcatattatttgtagacat 37030450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 44596654 - 44596773
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| |||||| | |||| | ||||||||||||||||||| ||||| |||| ||||||||| || | ||| ||||||||||||||  || ||||||||||    
T  44596654 tcgtctaagtgtgacgttgtattgttcgtcgtcttgtgcggcgtttgattt-gcgtcttgtggcagcgttcgtttagttcctattaaaaaatctacatca 44596752  T
Q  103 gtcaattgcaaattcaaccaat 124  Q
    ||| ||| ||||||||| ||||    
T  44596753 gtc-attacaaattcaatcaat 44596773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 45 - 159
Target Start/End: Complemental strand, 22038879 - 22038765
Alignment:
Q  45 gtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgc 144  Q
    |||| |||||||||||||| | |||| | |||| |||| ||||| ||||||||| |||||||||  || ||||||  ||| |||| | |  ||| |||||    
T  22038879 gtttgatttcgcgtcttgttgtggtgctcgtttggttcatattgaaagatctacttcagtcaatcacatattcaataaatgattttgacatcaatgttgc 22038780  T
Q  145 agatccagaagcatg 159  Q
    |||||||||||||||    
T  22038779 agatccagaagcatg 22038765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 199
Target Start/End: Original strand, 45418610 - 45418697
Alignment:
Q  111 caaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||||| |||| ||||||||  |||||||||||||||  |||||  |  ||||| |||||||| | ||||||||||||||||||||    
T  45418610 caaattcaatcaatgatttgggcatcaacgttgcagatccgaaagcactagtatttcggtgactta-gattttatcatattatttgtag 45418697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 160
Target Start/End: Complemental strand, 48351287 - 48351148
Alignment:
Q  23 tgttgttcgtcgtcttgtgcgc--gtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaac 120  Q
    |||||||  |||||||||| ||  |||| ||||||||||||||| ||||||| |||| |||  ||||| ||||||  | |||||||||  || |||||||    
T  48351287 tgttgtttatcgtcttgtgggcttgtttgatttcgcgtcttgtcacggtgttcgtttggtttatattgaaagatcagcttcagtcaatcacatattcaac 48351188  T
Q  121 caattatttgggcggcaacgttgcagatccagaagcatga 160  Q
    | || |||||| || |  |||||||||||  |||||||||    
T  48351187 ctatgatttggacgtccgcgttgcagatctggaagcatga 48351148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 159
Target Start/End: Original strand, 27651996 - 27652090
Alignment:
Q  65 gcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatg 159  Q
    |||||||| |||| |||| ||||| ||||||  | | || ||||  ||||||||| |||| |||||||   ||||||||||||||||||||||||    
T  27651996 gcggtgttcgtttggttcgtattgaaagatcagctttagacaatcacaaattcaatcaatgatttgggtatcaacgttgcagatccagaagcatg 27652090  T

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Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 47320435 - 47320377
Alignment:
Q  99 atcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagca 157  Q
    ||||||||||  || |||||| |||| |||||| || ||||||||||||||||||||||    
T  47320435 atcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagca 47320377  T

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Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 29120375 - 29120303
Alignment:
Q  126 atttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||||| |||| |||||||||  |||||||||  ||||| || ||||||  ||||||||||||||||||||    
T  29120375 atttgggcgtcaacattgcagatctggaagcatgagtatttcggtaacttaga-ttttatcatattatttgtag 29120303  T

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Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 29120482 - 29120421
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtc 64  Q
    |||| ||||||||||| | |||||||| ||||||||| || ||||| |||||||||||||||    
T  29120482 tcgtctaagtgcggcgctgtgttgttcatcgtcttgtacgacgtttgatttcgcgtcttgtc 29120421  T

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Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 31891298 - 31891249
Alignment:
Q  111 caaattcaaccaattatttgggcggcaacgttgcagatccagaagcatga 160  Q
    ||||||||| | || ||||||||| |||||||||| ||||||||||||||    
T  31891298 caaattcaaaccatgatttgggcgtcaacgttgcaaatccagaagcatga 31891249  T

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Target: chr8 (Bit Score: 133; Significance: 2e-69; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 23230615 - 23230810
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23230615 tcgtctaagtgcggcgatttgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 23230714  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| |||||||||||||| | ||||||| ||||||||||||||| ||||||||   ||||| |||||||||| ||||||||||||||||||||    
T  23230715 gtcaattacaaattcaaccaatgacttgggcgtcaacgttgcagatccggaagcatgggtatttcggtgacttagg-ttttatcatattatttgtag 23230810  T

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Target: chr8; HSP #2
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 20553358 - 20553163
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| |||||||||||||||||||||||||||||| |||| ||||| |||| | |||||||||||||||||||| ||||||||||| |||||||| ||||    
T  20553358 tcgtctaagtgcggcgttttgttgttcgtcgtcttatgcggcgtttgattttgtgtcttgtcgcggtgtttgttcagttcctattgaaagatctatatca 20553259  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
     |||||| ||||||||| |||| |||||| || ||||||||||||||| |||||||||  ||||| |||||||||| ||||||||||||||||||||    
T  20553258 atcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttagg-ttttatcatattatttgtag 20553163  T

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Target: chr8; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 7677403 - 7677206
Alignment:
Q  1 tcatcgtttaagtgcggcgttttgttgttcgtcgtcttgtgc-gcgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctaca 99  Q
    ||||||| ||| ||||||||| |||||||||||||||||||| || ||| ||||||||||||||||||||||| |||| ||||||| || || ||| |||    
T  7677403 tcatcgtctaattgcggcgttgtgttgttcgtcgtcttgtgctgcatttgatttcgcgtcttgtcgcggtgttcgtttggttcctactgaaatatcaaca 7677304  T
Q  100 tcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgta 198  Q
    |||||||||| || |||| |||||| ||||| ||| ||||||||||||||| |||||||||| ||||| |||||||||| |||||||||||||||||||    
T  7677303 tcagtcaattacagattcgaccaatgatttgagcgtcaacgttgcagatccggaagcatgaatatttcggtgacttagg-ttttatcatattatttgta 7677206  T

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Target: chr8; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 37971255 - 37971450
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||| ||||||| | || ||| |||||||||| ||||||||||| |||||||||||||    
T  37971255 tcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtttgatttcgctttttttcgtggtgtttgttcagttcctattgaaagatctacatca 37971354  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
     |||||| ||||||||| |||| |||||| || ||||||||||||||| ||| |||||  ||||| |||||||||| |||||||| |||||||||||    
T  37971355 atcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaaacatgagtatttcggtgacttagg-ttttatcacattatttgtag 37971450  T

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Target: chr8; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 7883353 - 7883163
Alignment:
Q  9 taagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaa 107  Q
    ||||||||||||| ||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||| ||||| ||||| ||||||||||| | ||||    
T  7883353 taagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcacgtcttgtcgcggtgtttgttcagttcatattgaaagatctacattaatcaa 7883254  T
Q  108 ttgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    || ||||||||| |||| |||||| || || |||||||||||| ||||||||   ||||| |||||||||| ||||||||||||||||||||    
T  7883253 ttacaaattcaagcaataatttggacgtcagcgttgcagatccggaagcatgggtatttcggtgacttagg-ttttatcatattatttgtag 7883163  T

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Target: chr8; HSP #6
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 17693731 - 17693536
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||| ||| | ||||||||| ||||||||| ||||| |||| |||| ||||||||||||||||||||||||||||  |||||| ||||||    
T  17693731 tcgtctaagtgcggtgttgtattgttcgtcttcttgtgcggcgtttgattttgcgttttgtcgcggtgtttgtttagttcctattaaaagatcgacatca 17693632  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| |||||||||||||| ||||||||| |||| |||||||||| |||||||||  |||||  ||||||| | ||||||||||||||||||||    
T  17693631 gtcaattacaaattcaaccaatgatttgggcgtcaacattgcagatccggaagcatgagtatttcgatgacttatg-ttttatcatattatttgtag 17693536  T

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Target: chr8; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 10377666 - 10377856
Alignment:
Q  9 taagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaa 107  Q
    ||||||||||||| ||||||||| ||||||||||| ||||| ||||||||| |||||| |||||||||| ||||||||||| ||||||||||||||||||    
T  10377666 taagtgcggcgttgtgttgttcgccgtcttgtgcggcgtttgatttcgcgttttgtcgtggtgtttgttcagttcctattgaaagatctacatcagtcaa 10377765  T
Q  108 ttgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||  ||||||||||||| |||||| |  ||||||||||||||| ||||||||   ||||| | |||||| | ||||||||||||||||||||    
T  10377766 ttataaattcaaccaatgatttggacatcaacgttgcagatccggaagcatgggtatttcggcgacttaag-ttttatcatattatttgtag 10377856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 4 - 197
Target Start/End: Complemental strand, 20559861 - 20559668
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| |||||||  |||||||||||||||||||||||||| | ||| |||| | |||||| ||||||||||||| ||||||||||| |||||||| ||||    
T  20559861 tcgtctaagtgcatcgttttgttgttcgtcgtcttgtgcggcctttgattttgtgtcttggcgcggtgtttgttcagttcctattgaaagatctatatca 20559762  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgt 197  Q
     |||||| ||||||||| |||| |||||| || ||||||||||||||| |||||||||  ||||| |||||||||| ||||||||||||||||||    
T  20559761 atcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttagg-ttttatcatattatttgt 20559668  T

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Target: chr8; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 4 - 197
Target Start/End: Complemental strand, 20571423 - 20571230
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| |||||||  |||||||||||||||||||||||||| | ||| |||| | |||||| ||||||||||||| ||||||||||| |||||||| ||||    
T  20571423 tcgtctaagtgcatcgttttgttgttcgtcgtcttgtgcggcctttgattttgtgtcttggcgcggtgtttgttcagttcctattgaaagatctatatca 20571324  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgt 197  Q
     |||||| ||||||||| |||| |||||| || ||||||||||||||| |||||||||  ||||| |||||||||| ||||||||||||||||||    
T  20571323 atcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttagg-ttttatcatattatttgt 20571230  T

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Target: chr8; HSP #10
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 40211407 - 40211225
Alignment:
Q  16 ggcgttttgttgttcgtcgtcttgtgc-gcgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaa 114  Q
    |||||| |||||||||||||||| ||| | |||| ||||||||| |||||||||||||||||||||| |||||| |||||||||||||||| ||| ||||    
T  40211407 ggcgttgtgttgttcgtcgtcttatgcagtgtttgatttcgcgtattgtcgcggtgtttgtttagtttctattgaaagatctacatcagtcgattacaaa 40211308  T
Q  115 ttcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgta 198  Q
    ||| |||||| ||||||||| |||||||| |||||| |||||||||  |||||  |||||| || |||||||||||||||||||    
T  40211307 ttccaccaatgatttgggcgtcaacgttgtagatccggaagcatgagtatttcgttgactt-ggattttatcatattatttgta 40211225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 45445928 - 45445733
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||| || |||| | ||||||||||||||||||| ||||| ||||||| | ||||||||||||||||||| ||||||||| ||||||  |||||    
T  45445928 tcgtctaagtacgacgttgtattgttcgtcgtcttgtgcggcgtttgatttcgcattttgtcgcggtgtttgtttatttcctattgaaagatcggcatca 45445829  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| |||||||||||||| ||||||||| |||||||| | |||| ||||||||  |||||  |||||||| | ||||||||||||||||||||    
T  45445828 gtcaattacaaattcaaccaatgatttgggcgtcaacgttgaaaatccggaagcatgtgaattttggtgactta-gattttatcatattatttgtag 45445733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 3673413 - 3673608
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcgc-gtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||| ||| |||||||||||||||| ||||  |||| |||||| ||||||| ||||||||  |||||||||||||| |||||| ||||||    
T  3673413 tcgtctaagtgcggtgttgtgttgttcgtcgtcttatgcggtgtttgatttcgtgtcttgttgcggtgttcctttagttcctattgaaagatcgacatca 3673512  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| |||||  || ||||  |||||||| ||||||||||||||| |||||||||  |||||||||||||| | ||| ||||||||||||||||    
T  3673513 gtcaattacaaatcaaatcaatgctttgggcgtcaacgttgcagatccggaagcatgagtatttcagtgacttaag-tttaatcatattatttgtag 3673608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 14545020 - 14544825
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||| ||||||||| | ||||| ||||||||||| | ||||| ||||| |||||||||||||||||  |||||||||||||| |||||| ||||||    
T  14545020 tcgtctaattgcggcgttgttttgttagtcgtcttgtgtggcgtttgatttcacgtcttgtcgcggtgttcatttagttcctattgaaagatcgacatca 14544921  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
     |||||| ||| || || |||||||||||||| ||||||||||||||| ||||||||  |||||| ||||||||   ||||||||||||||||||||    
T  14544920 atcaattacaagttaaatcaattatttgggcgtcaacgttgcagatccggaagcatgggaatttcggtgactta-aattttatcatattatttgtag 14544825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 17 - 199
Target Start/End: Complemental strand, 25191171 - 25190987
Alignment:
Q  17 gcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaat 115  Q
    ||||| ||||||||||||||||||||| ||||| ||||||| | ||||||||||||||||||| ||||||||| ||||||  ||||||||||||   |||    
T  25191171 gcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgctttttgtcgcggtgtttgtttatttcctattgaaagatcagcatcagtcaattatgaat 25191072  T
Q  116 tcaaccaat--tatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    |||||||||  |||||||||| |||||||| |||||| ||||||||  |||| |  ||||||||| ||||||||||||||||||||    
T  25191071 tcaaccaatgatatttgggcgtcaacgttgaagatccggaagcatgtgaattgcgatgacttagg-ttttatcatattatttgtag 25190987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 43 - 199
Target Start/End: Complemental strand, 31013685 - 31013530
Alignment:
Q  43 gcgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgtt 142  Q
    |||||| ||||||| ||||||||||||||||||| ||||||||||| || |||||||||||||||||  |||||||| |||| |||||| || |||||||    
T  31013685 gcgtttgatttcgcatcttgtcgcggtgtttgttcagttcctattgaaatatctacatcagtcaattaaaaattcaatcaatgatttggacgtcaacgtt 31013586  T
Q  143 gcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    |||||| | ||||||||   |||||||||||||| | ||||||||||||||||||||    
T  31013585 gcagattcggaagcatgtgtatttcagtgacttaag-ttttatcatattatttgtag 31013530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 196
Target Start/End: Complemental strand, 16247340 - 16247148
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| |||||||| |||||||||||| ||||| ||||| ||||||||||||||||| ||||||||||||| | |||||| ||||||    
T  16247340 tcgtctaagtgcggcgttgtgttgttcatcgtcttgtgcgacgtttgatttcacgtcttgtcgcggtgttcgtttagttcctatggaaagatcgacatca 16247241  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 196  Q
     | |||| ||||||||| |||| ||||||||  ||| ||||||||||| ||||||||   |||||  ||||||| | ||| |||||||||||||    
T  16247240 attaattacaaattcaatcaatgatttgggcatcaatgttgcagatccggaagcatgggtatttcgctgactta-gatttgatcatattatttg 16247148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 43 - 203
Target Start/End: Complemental strand, 33214748 - 33214589
Alignment:
Q  43 gcgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgtt 142  Q
    |||||| |||||||||||||||| ||||||  |||||||||||||| ||||||  | |||||||||| |||||||||||||| ||||||||  |||||||    
T  33214748 gcgtttgatttcgcgtcttgtcgtggtgttcttttagttcctattgaaagatcggcgtcagtcaattacaaattcaaccaatgatttgggcttcaacgtt 33214649  T
Q  143 gcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacat 203  Q
    |||||||| ||||||||  ||||||  ||||||| | |||||||||||||||| |||||||    
T  33214648 gcagatccggaagcatgtgaatttcgatgacttatg-ttttatcatattatttttagacat 33214589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 40619193 - 40619033
Alignment:
Q  1 tcatcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctaca 99  Q
    ||||||| ||||||||||||| ||||||| ||||||||||| | ||||| |||||| ||||| ||||||||||  |||||||| ||||  |||||| |||    
T  40619193 tcatcgtctaagtgcggcgttgtgttgtttgtcgtcttgtgtgacgtttgatttcgtgtcttatcgcggtgttcatttagttcttattcaaagatcgaca 40619094  T
Q  100 tcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatga 160  Q
      |||||||| ||||||||| |||| ||||||||| |||||||||||||||||||||||||    
T  40619093 atagtcaattacaaattcaatcaataatttgggcgtcaacgttgcagatccagaagcatga 40619033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 36948557 - 36948397
Alignment:
Q  1 tcatcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctaca 99  Q
    ||||||| ||||||  ||||| ||||||| |||||| |||||| ||||| ||||||||||||||||||||||||||||| ||||||||| || ||  |||    
T  36948557 tcatcgtctaagtgttgcgttgtgttgtttgtcgtcctgtgcggcgtttgatttcgcgtcttgtcgcggtgtttgtttaattcctattgaaaaattgaca 36948458  T
Q  100 tcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatga 160  Q
    |||||||||| ||||||||| |||| |||| ||  |||| |||||| |||| |||||||||    
T  36948457 tcagtcaattacaaattcaatcaatgatttaggatgcaatgttgcaaatccggaagcatga 36948397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 11 - 198
Target Start/End: Original strand, 5333405 - 5333595
Alignment:
Q  11 agtgcggcgttttgttgttcgtcgtcttgtgcgc----gtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtca 106  Q
    ||||||| ||| |||||||||||||||||||||     |||| |||| |||||||||  ||||||| |||| |||||||||| |||||| || |||||||    
T  5333405 agtgcggtgttgtgttgttcgtcgtcttgtgcggtgttgtttgattttgcgtcttgttccggtgttcgtttggttcctattgaaagatcaacttcagtca 5333504  T
Q  107 attgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgta 198  Q
    ||  || |||||| |||||||||||||| |||||||| ||||||||||||||||  |||  ||||| ||| | |||| ||||||||||||||    
T  5333505 atcacatattcaatcaattatttgggcgtcaacgttgtagatccagaagcatgagtattctagtgattta-gattttgtcatattatttgta 5333595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 43 - 199
Target Start/End: Original strand, 28897721 - 28897876
Alignment:
Q  43 gcgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgtt 142  Q
    |||||| |||||||||||||||| |||||| ||||||||||||||| |||||| |||||||||||||  || |||||  ||| |||||||||  ||||||    
T  28897721 gcgtttgatttcgcgtcttgtcgtggtgttcgtttagttcctattgaaagatcgacatcagtcaattataagttcaattaatgatttgggcgtaaacgtt 28897820  T
Q  143 gcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    |||||| | |||| ||  |||||||  ||||||| | ||||||||||||||||||||    
T  28897821 gcagatacggaagtattgaaatttcgatgactta-gattttatcatattatttgtag 28897876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 17 - 203
Target Start/End: Complemental strand, 27110569 - 27110383
Alignment:
Q  17 gcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaat 115  Q
    ||||| ||||| | ||||||||||| | ||||| |||| |||||||||||| ||||| ||||||||| | ||| |||||  ||||||| ||| | |||||    
T  27110569 gcgttgtgttggtagtcgtcttgtgtggcgtttgattttgcgtcttgtcgcagtgttcgtttagttcatgttgaaagattgacatcagacaactacaaat 27110470  T
Q  116 tcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacat 203  Q
    |||| |||| ||||| ||| ||||||||||||||  ||||||||   |||| ||||||||| | ||||||||||||||||||||||||    
T  27110469 tcaatcaatgatttgagcgtcaacgttgcagatctggaagcatgtgtattttagtgactta-gattttatcatattatttgtagacat 27110383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 71 - 199
Target Start/End: Original strand, 29939340 - 29939467
Alignment:
Q  71 tttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagt 170  Q
    |||||||| ||  ||||| |||||| |  |||||||||| | |||||||||||| |||||||||  ||||||||| ||||| ||||||||  ||||||||    
T  29939340 tttgtttaatttatattgaaagatcgatctcagtcaattactaattcaaccaatgatttgggcgttaacgttgcatatccataagcatgagtatttcagt 29939439  T
Q  171 gacttaggcttttatcatattatttgtag 199  Q
    |||||||| ||||||||||||||||||||    
T  29939440 gacttagg-ttttatcatattatttgtag 29939467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 23 - 195
Target Start/End: Complemental strand, 9637507 - 9637335
Alignment:
Q  23 tgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaacc 121  Q
    |||||||||||||||||| || | ||| |||||||||||| | || || || ||||||||||||||| |||||| |||||||| |||| ||||  |||      
T  9637507 tgttgttcgtcgtcttgtacgacatttgatttcgcgtcttattgcagtattcgtttagttcctattgaaagatcaacatcagttaattacaaacacaatt 9637408  T
Q  122 aattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattattt 195  Q
    ||| ||||| ||| ||||||||||||| | ||| |||||  ||||| || ||||||| ||||||||||||||||    
T  9637407 aatgatttgagcgtcaacgttgcagattcggaaacatgagtatttcggtaacttagg-ttttatcatattattt 9637335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 50 - 195
Target Start/End: Complemental strand, 24186730 - 24186587
Alignment:
Q  50 atttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatc 149  Q
    ||||||||| |||||| | |||| ||||||||||||||| |||||  |||||||||||||  || ||||| |||| ||||||||| ||||||||||||||    
T  24186730 atttcgcgttttgtcgtgatgttcgtttagttcctattg-aagattgacatcagtcaattataagttcaatcaataatttgggcgtcaacgttgcagatc 24186632  T
Q  150 cagaagcatgaaaatttcagtgacttaggcttttatcatattattt 195  Q
    |  |||||||   ||||||||||||||   ||||||||||||||||    
T  24186631 cgaaagcatgggtatttcagtgactta-aattttatcatattattt 24186587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 83 - 199
Target Start/End: Complemental strand, 16928794 - 16928679
Alignment:
Q  83 ctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttt 182  Q
    |||||| |||||| ||||||||||||| |||||||||||||| |||||| |  |||||||||||||||  |||| ||   ||||| |||||||||| |||    
T  16928794 ctattgaaagatcgacatcagtcaattacaaattcaaccaatgatttggacatcaacgttgcagatccgaaagcgtgggtatttcggtgacttagg-ttt 16928696  T
Q  183 tatcatattatttgtag 199  Q
    |||||||||||||||||    
T  16928695 tatcatattatttgtag 16928679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 28086930 - 28086734
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgc-gcgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||| ||||| ||||||||||| |||||||| || ||| ||||||||||||||||| |||||  || | ||| | ||| |||||| || |||    
T  28086930 tcgtctaagtgctgcgttgtgttgttcgtcatcttgtgcagcatttgatttcgcgtcttgtcgcagtgttcattcaattcttgttgaaagatcgacttca 28086831  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    || |||| ||||||||| |||| ||||||  | |||||||||||||||  || |||    |||||||||| ||  | ||||||||||||||||||||    
T  28086830 gttaattacaaattcaatcaatgatttggaagtcaacgttgcagatccgtaaacattggtatttcagtgattttagattttatcatattatttgtag 28086734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 151
Target Start/End: Complemental strand, 29617375 - 29617243
Alignment:
Q  23 tgttgttcgtcgtcttgtgcgc----gtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattca 118  Q
    |||||||||||||||||||||     |||| |||||||||||||| |||||||| |||| |||| ||||| |||| | || |||||||||  || |||||    
T  29617375 tgttgttcgtcgtcttgtgcggcgctgtttgatttcgcgtcttgttgcggtgttcgtttggttcttattgaaagaccaacttcagtcaatcacagattca 29617276  T
Q  119 accaattatttgggcggcaacgttgcagatcca 151  Q
    | |||| |||||| || ||||||||||||||||    
T  29617275 atcaatgatttggacgtcaacgttgcagatcca 29617243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 199
Target Start/End: Original strand, 5046744 - 5046920
Alignment:
Q  23 tgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaacc 121  Q
    ||||||||||||| ||||||| ||||| ||||| |  |||||   ||| || |||| |||||||||| || ||| |  |||||||||| || |||||| |    
T  5046744 tgttgttcgtcgtattgtgcggcgtttgatttcacaccttgttttggtattcgtttggttcctattgaaaaatcaaattcagtcaattacagattcaatc 5046843  T
Q  122 aattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||| |||||| || | ||||||||||| || || |||||| |||||||||||||| |  |||||||||||||||||||    
T  5046844 aataatttggacgtcgacgttgcagattcataaacatgaatatttcagtgactta-gaatttatcatattatttgtag 5046920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 203
Target Start/End: Complemental strand, 27498462 - 27498284
Alignment:
Q  23 tgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaacc 121  Q
    ||||||||||||||||||||| | ||| |||||||||||||||| ||||||  |||| ||||||||| |||||| || |||||  | | |||||||||      
T  27498462 tgttgttcgtcgtcttgtgcgacatttgatttcgcgtcttgtcgtggtgttcatttaattcctattgaaagatcaacttcagt-tagtacaaattcaatt 27498364  T
Q  122 aattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacat 203  Q
    ||| ||||||||| |||| ||||||||   ||| ||||   |||||||||| ||| | |||||||||||||||| |||||||    
T  27498363 aatgatttgggcgtcaacattgcagatttggaaacatg-gtatttcagtgattta-gattttatcatattatttatagacat 27498284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 159
Target Start/End: Complemental strand, 471277 - 471127
Alignment:
Q  10 aagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaat 108  Q
    |||||||||| | ||||||||||||||| ||||| ||||| |||| | ||||||| |||||| | |||| |||| ||||| ||||||  | ||| |||||    
T  471277 aagtgcggcgctgtgttgttcgtcgtctggtgcgacgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaat 471178  T
Q  109 tgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatg 159  Q
       | |||||| |||| ||||| ||| ||||||||||||||| ||||||||    
T  471177 catagattcaatcaatgatttgtgcgtcaacgttgcagatccggaagcatg 471127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 157
Target Start/End: Complemental strand, 8443631 - 8443474
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcgc----gtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctaca 99  Q
    |||| ||||||||| ||| |||||||||||||||||||||     |||| ||| |||||||||| || ||||| |||| ||||   ||| |||||| ||     
T  8443631 tcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgttgtttgattccgcgtcttgttgcagtgttcgtttggttcaatttgaaagatcaact 8443532  T
Q  100 tcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagca 157  Q
    |||||||||  || |||||| |||| |||||| |  ||||||||||||||| ||||||    
T  8443531 tcagtcaatcacatattcaatcaatgatttggacatcaacgttgcagatccggaagca 8443474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 199
Target Start/End: Complemental strand, 30568335 - 30568243
Alignment:
Q  106 aattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    |||| |||||||||||||| ||||| ||| |||||||| |||||  ||||||||  ||||||  ||||||||| ||||||||| ||||||||||    
T  30568335 aattacaaattcaaccaatgatttgagcgtcaacgttgaagatcttgaagcatgtgaatttcgatgacttagg-ttttatcatgttatttgtag 30568243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 157
Target Start/End: Complemental strand, 1236816 - 1236660
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcgc----gtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctaca 99  Q
    |||| |||||||| | || |||||||||| ||||||||||     |||| |||| || |||||| |||||||| |||  |||| ||||| |||||| ||     
T  1236816 tcgtctaagtgcgaccttgtgttgttcgttgtcttgtgcggcgttgtttgatttggcatcttgttgcggtgttcgttg-gttcatattgaaagatcaact 1236718  T
Q  100 tcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagca 157  Q
    |||||||||  || |||||| |||| || ||| || ||||||||||||||||||||||    
T  1236717 tcagtcaatcacatattcaatcaatgatctggacgtcaacgttgcagatccagaagca 1236660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 157
Target Start/End: Complemental strand, 1239516 - 1239360
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcgc----gtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctaca 99  Q
    |||| |||||||| | || |||||||| ||||||||||||     |||| |||| || |||||| |||||||| |||  |||| ||||| |||||| ||     
T  1239516 tcgtctaagtgcgaccttgtgttgttcatcgtcttgtgcggcgttgtttgatttggcatcttgttgcggtgttcgttg-gttcatattgaaagatcaact 1239418  T
Q  100 tcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagca 157  Q
    |||||||||  || |||||| |||| || ||| || ||||||||||||||||||||||    
T  1239417 tcagtcaatcacatattcaatcaatgatctggacgtcaacgttgcagatccagaagca 1239360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 154
Target Start/End: Complemental strand, 18890752 - 18890665
Alignment:
Q  67 ggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaa 154  Q
    |||||| |||| |||| ||||| ||||||  | |||| ||||  ||||||||| |||| ||||||||| |||||||||||||||||||    
T  18890752 ggtgttcgtttggttcgtattgaaagatcagcttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaa 18890665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 157
Target Start/End: Original strand, 15344297 - 15344434
Alignment:
Q  23 tgttgttcgtcgtcttgtgcgc----gtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattca 118  Q
    |||||||||||||||||||||     |||| ||||  | |||||| |||||||| |||  |||| ||||| |||||| |  |||||||||  || |||||    
T  15344297 tgttgttcgtcgtcttgtgcggcgtagtttgatttgacatcttgttgcggtgttcgttg-gttcatattgaaagatcaagttcagtcaatcacagattca 15344395  T
Q  119 accaattatttgggcggcaacgttgcagatccagaagca 157  Q
    | |||| |||||| || ||||||||||||||||||||||    
T  15344396 atcaatgatttggacgtcaacgttgcagatccagaagca 15344434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 157
Target Start/End: Original strand, 15433362 - 15433499
Alignment:
Q  23 tgttgttcgtcgtcttgtgcgc----gtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattca 118  Q
    |||||||||||||||||||||     |||| ||||  | |||||| |||||||| |||  |||| ||||| |||||| |  |||||||||  || |||||    
T  15433362 tgttgttcgtcgtcttgtgcggcgtagtttgatttgacatcttgttgcggtgttcgttg-gttcatattgaaagatcaagttcagtcaatcacagattca 15433460  T
Q  119 accaattatttgggcggcaacgttgcagatccagaagca 157  Q
    | |||| |||||| || ||||||||||||||||||||||    
T  15433461 atcaatgatttggacgtcaacgttgcagatccagaagca 15433499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 157
Target Start/End: Original strand, 15524666 - 15524803
Alignment:
Q  23 tgttgttcgtcgtcttgtgcgc----gtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattca 118  Q
    |||||||||||||||||||||     |||| ||||  | |||||| |||||||| |||  |||| ||||| |||||| |  |||||||||  || |||||    
T  15524666 tgttgttcgtcgtcttgtgcggcgtagtttgatttgacatcttgttgcggtgttcgttg-gttcatattgaaagatcaagttcagtcaatcacagattca 15524764  T
Q  119 accaattatttgggcggcaacgttgcagatccagaagca 157  Q
    | |||| |||||| || ||||||||||||||||||||||    
T  15524765 atcaatgatttggacgtcaacgttgcagatccagaagca 15524803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 41684397 - 41684498
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| |||||| || ||| |||||||| ||||||||| || | ||| | ||||||||||||||||||||   |||||||||||||| |||| | ||||||    
T  41684397 tcgtctaagtgtggtgttgtgttgttcatcgtcttgtacgacatttgaattcgcgtcttgtcgcggtgtccatttagttcctattgaaagaccgacatca 41684496  T
Q  103 gt 104  Q
    ||    
T  41684497 gt 41684498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 159
Target Start/End: Original strand, 42046264 - 42046349
Alignment:
Q  74 gtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatg 159  Q
    |||| |||| ||||| ||||||  | |||| ||||  ||||||||| |||| ||||||||| ||| ||||||||||||||||||||    
T  42046264 gtttggttcgtattgaaagatcagcttcagacaatcacaaattcaatcaatgatttgggcgtcaatgttgcagatccagaagcatg 42046349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 196
Target Start/End: Complemental strand, 7198203 - 7198120
Alignment:
Q  112 aaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 196  Q
    |||||||| |||| ||||||  | ||||||||||||||| |||||||||| ||||  |||| ||| | |||||||||||||||||    
T  7198203 aaattcaatcaatgatttggatgtcaacgttgcagatccggaagcatgaatattttggtgattta-gattttatcatattatttg 7198120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 155
Target Start/End: Original strand, 3240368 - 3240504
Alignment:
Q  23 tgttgttcgtcgtcttgtgcgc----gtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattca 118  Q
    |||||||||||||||||| ||     |||| ||||||||| |||| | ||||||||||| |||  ||||| ||||||  | |||||||||  || |||||    
T  3240368 tgttgttcgtcgtcttgtacgacgttgtttgatttcgcgtgttgttgtggtgtttgtttggttaatattgaaagatcggcttcagtcaatcacatattca 3240467  T
Q  119 accaattatttgggcggcaacgttgcagatccagaag 155  Q
    | | || |||||| || ||| ||||||||||||||||    
T  3240468 atcgatgatttggacgccaatgttgcagatccagaag 3240504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 112 - 159
Target Start/End: Original strand, 39657535 - 39657582
Alignment:
Q  112 aaattcaaccaattatttgggcggcaacgttgcagatccagaagcatg 159  Q
    |||||||| |||| |||||| || ||||||||||||||||||||||||    
T  39657535 aaattcaatcaatgatttggacgtcaacgttgcagatccagaagcatg 39657582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 199
Target Start/End: Complemental strand, 33347610 - 33347443
Alignment:
Q  31 gtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattattt 129  Q
    ||||||||||| | ||||| |||||  ||||||| ||||||||  ||| | |||||||| |||||| || |||||||||  || |||||| |||| ||||    
T  33347610 gtcgtcttgtgtggcgtttgatttcatgtcttgttgcggtgttcattt-gatcctattgaaagatcaacttcagtcaatcacagattcaatcaatgattt 33347512  T
Q  130 gggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
     |||| | ||||||| |||||  |||||||   ||||| |||||| ||  ||| ||||||||||||||||    
T  33347511 aggcgtcgacgttgcggatccgaaagcatgggtatttcggtgactcagaattt-atcatattatttgtag 33347443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 8412515 - 8412451
Alignment:
Q  9 taagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtt 72  Q
    ||||||||  ||| ||||||||||||||||||||| | ||| |||||| |||||||| |||||||    
T  8412515 taagtgcgatgttgtgttgttcgtcgtcttgtgcgacatttgatttcgagtcttgtcccggtgtt 8412451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 14585757 - 14585805
Alignment:
Q  111 caaattcaaccaattatttgggcggcaacgttgcagatccagaagcatg 159  Q
    ||||||||| || | |||||| || ||||||||||||||||||||||||    
T  14585757 caaattcaatcattgatttggacgtcaacgttgcagatccagaagcatg 14585805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 125; Significance: 1e-64; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 38597766 - 38597961
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| |||||||||| ||||||||||| |||||||||||||    
T  38597766 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttgtcgtggtgtttgttcagttcctattgaaagatctacatca 38597865  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| |||||||||||||| |||||| || ||||||||||||||| ||||||||   |||||||||||||||| ||||||||||||||||||||    
T  38597866 gtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcagtgacttagg-ttttatcatattatttgtag 38597961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 24229898 - 24229708
Alignment:
Q  9 taagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaa 107  Q
    ||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  24229898 taagtgcggcgttttgttgttcgtcgtcttgtgtgacgtttgatttcgcgtcttgtcgcggtgtttgtttagttcctattgaaagatctacatcaatcaa 24229799  T
Q  108 ttgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    || ||||||||| |||| |||||| || ||| ||||||||||| | |||||| | ||||| |||||||||| ||||||||||||||||||||    
T  24229798 ttacaaattcaagcaatgatttggacgtcaatgttgcagatccggtagcatggatatttctgtgacttagg-ttttatcatattatttgtag 24229708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 9113844 - 9113649
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||| ||| ||||||||||||||||| ||||||| ||| |||||||||||||    
T  9113844 tcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcggcgtttgatttcacgttttgtcgcggtgtttgttcagttcctcttgaaagatctacatca 9113745  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| |||||||||||||| |||||| || ||||||||||||||| |||||||  | ||||| |||||||| | ||||||||||||||||||||    
T  9113744 gtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatagatatttcggtgacttaag-ttttatcatattatttgtag 9113649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 13007198 - 13007393
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| ||||||||||||||||||||| ||||| |||| | || ||||||||||||||||||||||||| ||| |||||||||||||    
T  13007198 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgattttgtgttttgtcgcggtgtttgtttagttcctcttgaaagatctacatca 13007297  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| |||||||||||||| |||||| || ||||||||||||||| ||||||||   ||||| |||||||| | ||||||||||||||||||||    
T  13007298 gtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaag-ttttatcatattatttgtag 13007393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 25980127 - 25980321
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| |||||||||  || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  25980127 tcgtctaagtgcggtattgtgttgttcgtcgtcttgtgcggcgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattgaaagatcaacatca 25980226  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||| | |||||||||||||| ||||||||| ||| ||||||||| | ||||||||   ||||| |||||||| | ||||||||||||||||||||    
T  25980227 gtcaactacaaattcaaccaatgatttgggcgtcaaagttgcagattcggaagcatgggtatttc-gtgacttaag-ttttatcatattatttgtag 25980321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 6012260 - 6012062
Alignment:
Q  1 tcatcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctaca 99  Q
    ||||||| ||||||||| ||| ||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||| ||||||||||  ||||||||||    
T  6012260 tcatcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcgcggtgtttgttcagttcctattaaaagatctaca 6012161  T
Q  100 tcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    |||||||||| |||||||||||||| |||||| || ||| |||| |||||| ||||||||   |||||||||||||| | ||| ||||||||||||||||    
T  6012160 tcagtcaattacaaattcaaccaatgatttggacgtcaatgttgtagatccggaagcatgggtatttcagtgacttaag-tttgatcatattatttgtag 6012062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 4 - 196
Target Start/End: Original strand, 35850768 - 35850960
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||| || |||| ||||||||||||||||||||| ||||| ||||||||| || |||||||||||||||| ||||||||| ||||||  |||||    
T  35850768 tcgtctaagtacgacgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttatcgcggtgtttgtttatttcctattgaaagatcggcatca 35850867  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 196  Q
    ||||||| |||||||||||||| ||||| ||| |||||||| |||||||||||||||  |||||| |||||||||| |||||||||||||||||    
T  35850868 gtcaattacaaattcaaccaatgatttgtgcgtcaacgttgaagatccagaagcatgtgaatttcggtgacttagg-ttttatcatattatttg 35850960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 31391872 - 31391677
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| |||||||| |||| |||||||| |||||||||||| | ||| ||||||| ||||||||| ||||||||||||||  ||||| ||||||  |||||    
T  31391872 tcgtctaagtgcgacgttgtgttgttcttcgtcttgtgcggcatttgatttcgcatcttgtcgcagtgtttgtttagtttttattgaaagatcggcatca 31391773  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| |||||||||||||| ||||||||| |||||||||||||||||||| ||||  ||||| |||||||||| |||||||||||||| |||||    
T  31391772 gtcaattacaaattcaaccaatgatttgggcgtcaacgttgcagatccagaaggatgagtatttcggtgacttagg-ttttatcatattatatgtag 31391677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 26825404 - 26825594
Alignment:
Q  9 taagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaa 107  Q
    ||||||||||||| ||||||||||| ||||||||| ||||| ||||||||| ||||||||||||||||| ||||||| ||| ||||||||||||||||||    
T  26825404 taagtgcggcgttgtgttgttcgtcttcttgtgcggcgtttgatttcgcgttttgtcgcggtgtttgttcagttcctcttgaaagatctacatcagtcaa 26825503  T
Q  108 ttgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    || |||||||||||||| |||||  ||   |||||||||||||| |||||||   ||||| |||||||| | ||||||||||||||||||||    
T  26825504 ttacaaattcaaccaatgatttgtacgattacgttgcagatccataagcatgtttatttcggtgacttaag-ttttatcatattatttgtag 26825594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 28 - 195
Target Start/End: Original strand, 34945386 - 34945553
Alignment:
Q  28 ttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaatta 126  Q
    |||||||||||||||| | ||| ||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||| |    
T  34945386 ttcgtcgtcttgtgcggcatttgatttcgcgttttgtcgcggtgtttgttcagttcctattgaaagatctacatcagtcaattacaaattcaaccaatga 34945485  T
Q  127 tttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattattt 195  Q
    ||||| || ||||||||||||||| ||||||||   ||||| |||||||| | ||||||||||||||||    
T  34945486 tttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaag-ttttatcatattattt 34945553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 7930151 - 7930341
Alignment:
Q  9 taagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaa 107  Q
    ||||||||||||| ||||||||||||||||||||| ||||| ||||||| ||| ||||| ||||||||||||||||||| | |||||| || ||||||||    
T  7930151 taagtgcggcgttgtgttgttcgtcgtcttgtgcgtcgtttgatttcgcatctggtcgcagtgtttgtttagttcctatggaaagatcgacgtcagtcaa 7930250  T
Q  108 ttgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    || |||||||||||||| ||||| ||| ||| ||||||||||| |||||||||  ||||  ||  |||||| ||||||||||||||||||||    
T  7930251 ttacaaattcaaccaatgatttgagcgtcaatgttgcagatccggaagcatgagtatttaggtttcttagg-ttttatcatattatttgtag 7930341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 9 - 203
Target Start/End: Original strand, 41630476 - 41630670
Alignment:
Q  9 taagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaa 107  Q
    ||||||||| ||||||||||| ||| |||||| || ||||| | ||||||||||||| ||||||| ||||||||||||||  |||||| || ||||||||    
T  41630476 taagtgcggtgttttgttgtttgtcatcttgtacgacgtttgacttcgcgtcttgtcacggtgttcgtttagttcctattaaaagatcgacttcagtcaa 41630575  T
Q  108 ttgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacat 203  Q
    || ||||||||| |||| ||||||||| |||||||||| |||||||||||||   ||||| |||||||| | ||||||||||||||||||||||||    
T  41630576 ttacaaattcaatcaatgatttgggcgtcaacgttgcacatccagaagcatgtgtatttccgtgactta-gattttatcatattatttgtagacat 41630670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 11977054 - 11976859
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| |||||| |||||| | |||||||||||||||| || ||||| ||||||||||||||||||||||||||||| || ||||||  |||||  |||||    
T  11977054 tcgtctaagtgtggcgttgtattgttcgtcgtcttgtacgacgtttgatttcgcgtcttgtcgcggtgtttgtttattttctattgagagatcggcatca 11976955  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| |||||||||||||| |||||| ||  ||||||| |||||  ||||||||  |||||| |||||||||| ||||||||||||||||||||    
T  11976954 gtcaattacaaattcaaccaatgatttggacgtgaacgttgaagatctggaagcatgtgaatttcggtgacttagg-ttttatcatattatttgtag 11976859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 14726580 - 14726385
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcgc-gtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||| ||| |||||||||||||||||||||  |||| ||||||||||||||| ||||||| ||||| ||| ||||| ||||||  |||||    
T  14726580 tcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcgatgtttgatttcgcgtcttgtcacggtgttagtttatttcttattgaaagatcggcatca 14726481  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||  |||||||||||||| ||||||| | |||||||| |||||| ||||||||  |||||  |||||||||| ||||||||||||||||||||    
T  14726480 gtcaatcacaaattcaaccaatgatttgggtgtcaacgttgaagatccggaagcatgtgaattttggtgacttagg-ttttatcatattatttgtag 14726385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 26 - 199
Target Start/End: Original strand, 38007349 - 38007522
Alignment:
Q  26 tgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaat 124  Q
    ||||| |||||||||||| ||||| |||||| || ||||||||||||||||||| ||||||||| ||||||  |||||||||||| |||||| |||||||    
T  38007349 tgttcatcgtcttgtgcggcgtttgatttcgtgttttgtcgcggtgtttgtttatttcctattgaaagatcggcatcagtcaattacaaatttaaccaat 38007448  T
Q  125 tatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
     |||||| || |||||||| |||||| ||||||||  |||||| |||| ||||| ||||||||||||||||||||    
T  38007449 gatttggacgtcaacgttgaagatccggaagcatgtgaatttcggtgaattagg-ttttatcatattatttgtag 38007522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 6216868 - 6217062
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||| ||||||||| ||||||||||||||||||||| | ||| ||||  | ||||||||| |||||||||||||| |||||| |||||||||||||    
T  6216868 tcgtctaaatgcggcgttatgttgttcgtcgtcttgtgcggcatttgattta-catcttgtcgcagtgtttgtttagtttctattgaaagatctacatca 6216966  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
     |||||| ||||||||| |||| ||||||||| ||||||||||||| | ||||||||   ||||| ||||||||   ||||||||||||||||||||    
T  6216967 atcaattacaaattcaatcaatgatttgggcgtcaacgttgcagattcggaagcatgtgtatttcggtgactta-aattttatcatattatttgtag 6217062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 159
Target Start/End: Complemental strand, 11074014 - 11073863
Alignment:
Q  9 taagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaa 107  Q
    ||||||| ||||| | ||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||| || |||||||||| ||||    
T  11074014 taagtgcagcgttgttttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaatatctacatcaatcaa 11073915  T
Q  108 ttgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatg 159  Q
    || ||||||||| |||| |||||| || ||||||| |||||||  |||||||    
T  11073914 ttacaaattcaagcaatgatttggacgtcaacgttacagatccgaaagcatg 11073863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 8096619 - 8096422
Alignment:
Q  1 tcatcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctaca 99  Q
    ||||||| ||||||||||||| |||||||||| || ||| ||| | ||| ||||||||||||||||||||||| ||||||||||||||| |||||   ||    
T  8096619 tcatcgtctaagtgcggcgttgtgttgttcgttgttttgagcggcatttgatttcgcgtcttgtcgcggtgttcgtttagttcctattgaaagattggca 8096520  T
Q  100 tcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||| |||||| ||| |||||||||| ||||| ||| |||| ||||||| || ||  ||||   |||||||||| ||||| ||||||||||||||||||||    
T  8096519 tcaatcaattacaatttcaaccaatgatttgagcgtcaacattgcagaaccggagccatg-tgatttcagtgatttagg-ttttatcatattatttgtag 8096422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 8 - 199
Target Start/End: Original strand, 10722734 - 10722925
Alignment:
Q  8 ttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtca 106  Q
    ||||||||| |||| |  |||| ||||||||||||| ||||| |||| | ||||| || ||||||| ||||||||||||||| |||||| || |||||||    
T  10722734 ttaagtgcgacgttgtcctgtttgtcgtcttgtgcggcgtttgattttgtgtcttatctcggtgttcgtttagttcctattgaaagatcgacttcagtca 10722833  T
Q  107 attgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
     ||  |||||||| |||| ||||||||| |||||||| ||||||| |||||||   ||||| |||||||| | ||||||||||||||||||||    
T  10722834 tttaaaaattcaatcaatgatttgggcgtcaacgttgtagatccaaaagcatgggtatttcggtgactta-gattttatcatattatttgtag 10722925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 23 - 199
Target Start/End: Original strand, 13421921 - 13422097
Alignment:
Q  23 tgttgttcgtcgtcttgtgcgcg-tttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaacc 121  Q
    |||||||||||||||||||||   ||| ||||||||| ||||||  |||||  |||||||||||||| |||||| ||||||||||||| ||||||||| |    
T  13421921 tgttgttcgtcgtcttgtgcggtatttgatttcgcgtattgtcgttgtgttcatttagttcctattgaaagatcgacatcagtcaattacaaattcaatc 13422020  T
Q  122 aattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||| ||||||||| ||| ||||||||| | ||||||||   ||||| ||||||||   |||||||||||||| |||||    
T  13422021 aatgatttgggcgtcaatgttgcagattctgaagcatgtgtatttcggtgactta-tattttatcatattatatgtag 13422097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 4 - 201
Target Start/End: Original strand, 19120879 - 19121078
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcgc----gtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctaca 99  Q
    |||| ||||||||||||| |||||||||||||||| || |     |||| |||||||||||||| |||||||||||||  ||||| || |||||||  |     
T  19120879 tcgtataagtgcggcgttgtgttgttcgtcgtcttatgaggcattgtttgatttcgcgtcttgttgcggtgtttgtttgtttcct-tttgaagatcagct 19120977  T
Q  100 tcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    |||||||||| ||||||| | |||| | ||  ||| ||||| |||||||| |||| |||||| ||||| |||||||||| ||||||||||||||||||||    
T  19120978 tcagtcaattacaaattctatcaatgacttaagcgtcaacgctgcagatctagaaacatgaatatttcggtgacttagg-ttttatcatattatttgtag 19121076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 43 - 199
Target Start/End: Complemental strand, 26878187 - 26878032
Alignment:
Q  43 gcgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgtt 142  Q
    |||||| |||||| |||||||||||||||| ||||| || || ||| |||||| |||||||||||||  | |||||| |||| ||||||||| |||| ||    
T  26878187 gcgtttgatttcgtgtcttgtcgcggtgttcgtttaatttctcttgaaagatcgacatcagtcaattagatattcaatcaatgatttgggcgtcaacatt 26878088  T
Q  143 gcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    |||||||||||||||||   ||||  |||||||| | ||||||||||||||||||||    
T  26878087 gcagatccagaagcatgggtattttggtgactta-gattttatcatattatttgtag 26878032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 11867656 - 11867754
Alignment:
Q  23 tgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaac 120  Q
    ||||||| |||||||||| || ||||| |||||||||||||||||  |||| ||||||||||||||  |||||| ||||||||||||| ||||||||||    
T  11867656 tgttgttagtcgtcttgtacggcgtttgatttcgcgtcttgtcgcattgttcgtttagttcctattaaaagatcgacatcagtcaattacaaattcaac 11867754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 31 - 159
Target Start/End: Original strand, 7036215 - 7036344
Alignment:
Q  31 gtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattattt 129  Q
    ||||||||||||| ||||| |||||||||||||||  |||||| ||||||||| | ||  |||||| |||| |||||||| |||||| || | || ||||    
T  7036215 gtcgtcttgtgcggcgtttgatttcgcgtcttgtcatggtgttcgtttagttcatgttaaaagatcgacataagtcaattacaaattgaatctatgattt 7036314  T
Q  130 gggcggcaacgttgcagatccagaagcatg 159  Q
    ||||| |||||||||||||||  |||||||    
T  7036315 gggcgtcaacgttgcagatccgaaagcatg 7036344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 59 - 203
Target Start/End: Original strand, 15571511 - 15571654
Alignment:
Q  59 cttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcat 158  Q
    ||||||| | |||| |||||||| |||||| |||||| || | ||| || | ||||||||| |||| ||||||| | ||||||||||||||| |||||||    
T  15571511 cttgtcgagatgttcgtttagttactattgaaagatcgactttagtaaactacaaattcaatcaatgatttgggtgtcaacgttgcagatccggaagcat 15571610  T
Q  159 gaaaatttcagtgacttaggcttttatcatattatttgtagacat 203  Q
    ||  | ||||||||||||   |||||||||||||||| |||||||    
T  15571611 gagtagttcagtgactta-aattttatcatattatttatagacat 15571654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 60 - 196
Target Start/End: Original strand, 1409524 - 1409659
Alignment:
Q  60 ttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatg 159  Q
    |||||||| |||| ||||||||| ||||  |||||| |||||| |||||| ||||||||| |||| ||||  ||| ||| |||||||||||  || ||||    
T  1409524 ttgtcgcgatgttcgtttagttcatattaaaagatcgacatcaatcaattacaaattcaatcaatgatttatgcgtcaatgttgcagatccgaaaacatg 1409623  T
Q  160 aaaatttcagtgacttaggcttttatcatattatttg 196  Q
    || |||| ||||||||| | ||| |||||||||||||    
T  1409624 aatattttagtgactta-gatttaatcatattatttg 1409659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 104 - 199
Target Start/End: Complemental strand, 14082414 - 14082320
Alignment:
Q  104 tcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    |||||| ||||| |||||||  ||||||||  ||||||||||||||| ||||||||   |||||| ||||||||| ||||||||||||||||||||    
T  14082414 tcaattacaaatccaaccaaagatttgggcatcaacgttgcagatccggaagcatgggtatttcaatgacttagg-ttttatcatattatttgtag 14082320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 157
Target Start/End: Complemental strand, 2979363 - 2979271
Alignment:
Q  65 gcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagca 157  Q
    |||||||| |||| |||| ||||  |||||| || |||| ||||  ||||||||| |||| ||||||||| ||||||||||||||||||||||    
T  2979363 gcggtgttcgtttggttcgtattaaaagatcaacttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagca 2979271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 203
Target Start/End: Complemental strand, 28540917 - 28540826
Alignment:
Q  111 caaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacat 203  Q
    ||||||||| |||| ||||||||| ||||||||||||||||||||||||   ||||  |||| ||| | ||| ||||||||||||||||||||    
T  28540917 caaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcatgggtattttggtgattta-gatttcatcatattatttgtagacat 28540826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 14082495 - 14082413
Alignment:
Q  1 tcatcgtttaagtgcggcgttttgttgttcgtcgtcttgtgc-gcgtttaatttcgcgtcttgtcgcggtgtttgtttagttc 82  Q
    ||||||| |||||| |||||| |||||||||||||||||| | |||||| ||||||  |||||||||||||||  ||||||||    
T  14082495 tcatcgtctaagtgtggcgttgtgttgttcgtcgtcttgtacggcgtttgatttcgtatcttgtcgcggtgttcatttagttc 14082413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 65 - 159
Target Start/End: Original strand, 14211258 - 14211352
Alignment:
Q  65 gcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatg 159  Q
    |||||||| |||| |||| ||||| ||||||  | |||| ||||  ||||| ||| |||| |||||| || ||||||||||||||||||||||||    
T  14211258 gcggtgttcgtttggttcgtattgaaagatcagcttcagacaatcacaaatgcaatcaatgatttggacgtcaacgttgcagatccagaagcatg 14211352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 37986225 - 37986140
Alignment:
Q  11 agtgcggcgttttgttgttcgtcgtcttgtgc-gcgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatc 95  Q
    ||||||||||| |||||||| ||||||||||| |||||| ||||||| |||||| |||| ||| ||||  ||| ||||| ||||||    
T  37986225 agtgcggcgttgtgttgttcatcgtcttgtgcggcgtttgatttcgcatcttgttgcggcgttcgtttgattcttattgaaagatc 37986140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 199
Target Start/End: Complemental strand, 35921073 - 35920920
Alignment:
Q  45 gtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgc 144  Q
    |||| |||||||||||||| ||||||||  |||  ||||||||  |||||| |  ||| |||||  || |||||| |||| |||||  || |||||||||    
T  35921073 gtttgatttcgcgtcttgttgcggtgttcatttgtttcctattaaaagatcaaattcaatcaatcacagattcaatcaatgatttgaacgtcaacgttgc 35920974  T
Q  145 agatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    |||||| |||||||  | |||  ||||| ||  | ||||||||||||||||||||    
T  35920973 agatccggaagcatcgatattctagtga-ttttgattttatcatattatttgtag 35920920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 19103478 - 19103429
Alignment:
Q  111 caaattcaaccaattatttgggcggcaacgttgcagatccagaagcatga 160  Q
    ||||||||| |||| ||||||||| |||  ||||||||||||||||||||    
T  19103478 caaattcaatcaatgatttgggcgtcaatattgcagatccagaagcatga 19103429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 125; Significance: 1e-64; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 5983809 - 5984004
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  5983809 tcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtttgatttcgtgtcttgtcgcggtgtttgtttagttcctattgaaagatctacatca 5983908  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| |||||||||||||| ||||||||| ||||| ||||||||| ||||||||   ||||| |||||||| | ||||||||||||||||||||    
T  5983909 gtcaattacaaattcaaccaatgatttgggcgtcaacgctgcagatccggaagcatgggtatttcggtgacttatg-ttttatcatattatttgtag 5984004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 21947737 - 21947542
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||| ||| | ||||||||||||||| |  || ||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  21947737 tcgtctaagtgcagcgctgtgttgttcgtcgtctcggacggcgtttgatttcgcgtcttgtcgcggtgtttgtttagttcttattgaaagatctacatca 21947638  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| |||||||||||||| |||||| || ||||||||||||||| |||||||||| ||||| |||||||| | ||||||||||||||||||||    
T  21947637 gtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgaatatttcggtgacttaag-ttttatcatattatttgtag 21947542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 45415531 - 45415726
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  45415531 tcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcatcgtttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctacatca 45415630  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
     |||||| |||| |||| |||| |||||| || ||||||||||||||| |||||||    ||||| |||||||||| ||||||||||||||||||||    
T  45415631 atcaattacaaactcaagcaatgatttggacgtcaacgttgcagatccggaagcataggtatttcggtgacttagg-ttttatcatattatttgtag 45415726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 43 - 203
Target Start/End: Original strand, 31919001 - 31919161
Alignment:
Q  43 gcgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgtt 142  Q
    |||||| ||||||||||||||||| ||||| ||||||||||| ||| |||||| ||||||||||||| ||| ||||| |||| ||||| ||  |||||||    
T  31919001 gcgtttgatttcgcgtcttgtcgcagtgttcgtttagttcctgttgaaagatcgacatcagtcaattacaagttcaatcaatgatttgagcatcaacgtt 31919100  T
Q  143 gcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacat 203  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  31919101 gcagatccagaagcatgaaaatttcagtgacttagggttttatcatattatttgtagacat 31919161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 34878397 - 34878202
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcgc-gtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||||||||| ||||||| |||||||||||||||||||||  |||| ||||||||| ||||||||||||||||| | ||||||||| ||||||  |||||    
T  34878397 tcgtttaagtacggcgttgtgttgttcgtcgtcttgtgcggtgtttgatttcgcgttttgtcgcggtgtttgttaatttcctattgaaagatcggcatca 34878298  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| |||||||||||||| ||||||||| |||||||| |||||| ||||||||  |  |||||||||||||| ||||||||||||||||||||    
T  34878297 gtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccggaagcatgtgatattcagtgacttagg-ttttatcatattatttgtag 34878202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 7836918 - 7836720
Alignment:
Q  1 tcatcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctaca 99  Q
    ||||||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||| ||| ||||| ||||||| | |||||| |||    
T  7836918 tcatcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgacgtttgatttcgcgtcttgtcgcggcgttcgtttatttcctatcgaaagatcgaca 7836819  T
Q  100 tcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    |||||||||| |||||||||||||| ||||||||| |||||||| | |||  || |||||  |||||| |||||||||| ||||||||||||||||||||    
T  7836818 tcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaatatctggaggcatgtgaatttcggtgacttagg-ttttatcatattatttgtag 7836720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 10 - 199
Target Start/End: Original strand, 14872619 - 14872807
Alignment:
Q  10 aagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaat 108  Q
    ||||||||| || ||||||||||||||||||||| ||||| |||||||||||||||||||||||  |||||||| ||||| |||||| ||||||||||||    
T  14872619 aagtgcggcattgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttgtcgcggtgttcatttagttc-tattgaaagatcgacatcagtcaat 14872717  T
Q  109 tgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    | |||||||||||||| ||||||||| ||||||||||||||| ||||||||   ||||  |||||||||| ||||||||||||||||||||    
T  14872718 tacaaattcaaccaatgatttgggcgtcaacgttgcagatccggaagcatgggtattttggtgacttagg-ttttatcatattatttgtag 14872807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 7337785 - 7337587
Alignment:
Q  1 tcatcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctaca 99  Q
    ||||||| ||||||||||||| ||||||||||||||||||||  ||||| ||||||||||||||||||||||||||| ||||| ||||| ||||||||||    
T  7337785 tcatcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcaacgtttgatttcgcgtcttgtcgcggtgtttgttcagttcatattgaaagatctaca 7337686  T
Q  100 tcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||| |||||| ||||||||| |||| |||||  || ||||||||||||||| ||||||||   ||||| |||| || || ||||||||||||||||||||    
T  7337685 tcaatcaattacaaattcaagcaatgatttgcacgtcaacgttgcagatccggaagcatgggtatttcggtgattttgg-ttttatcatattatttgtag 7337587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 1742254 - 1742447
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| |||||| ||||| ||||||||| ||||||  |||||    
T  1742254 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgacgtttgatttcgcgtcttgtcgtggtgttcgtttatttcctattgaaagatcggcatca 1742353  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
     |||||| |||||||||||||| ||||||||| |||||||| ||||||  |||||||  |||||| |||||  ||| ||||||||||||||||||||    
T  1742354 atcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccgaaagcatgtgaatttcggtgac--agg-ttttatcatattatttgtag 1742447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 10776580 - 10776385
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| |||||||||||||||| |||| ||||| |||  |||||||||||||||||| ||||| ||||| ||| |||||| ||||||    
T  10776580 tcgtctaagtgcggcgttgtgttgttcgtcgtcttatgcggcgtttgattgtgcgtcttgtcgcggtgttcgtttacttccttttgaaagatcgacatca 10776481  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| ||||| ||| |||| |||||| || |||| ||||||||||||||||||||  ||||| |||||||||| ||||||||| ||||||||||    
T  10776480 gtcaattacaaatccaatcaatgatttggacgtcaacattgcagatccagaagcatgagtatttcggtgacttagg-ttttatcattttatttgtag 10776385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 4 - 198
Target Start/End: Complemental strand, 35484510 - 35484316
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| ||||||||||||||||||||| | |||  |||||||||||||||||||||||||| | ||||||||| |||||||||||||    
T  35484510 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgtcatttgctttcgcgtcttgtcgcggtgtttgttcaattcctattgaaagatctacatca 35484411  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgta 198  Q
     |||||| ||||||||| |||| |||||| || |||||||||||||||  |||||||   ||||| |||| || || |||||||||||||||||||    
T  35484410 atcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccgaaagcatgggtatttcggtgatttcgg-ttttatcatattatttgta 35484316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 4 - 196
Target Start/End: Complemental strand, 23291761 - 23291569
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||| ||||||| |||||||| |  ||||||||| ||||| ||||||| ||||||||||||||| ||||| ||||||||| ||||||  |||||    
T  23291761 tcgtctaagtacggcgttgtgttgttcattatcttgtgcgacgtttgatttcgcttcttgtcgcggtgttcgtttatttcctattgaaagatcggcatca 23291662  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 196  Q
    ||||||| |||||||||||||| ||||||||  |||||||| |||||| ||||||||  |||||| |||||||||| |||||||||||||||||    
T  23291661 gtcaattacaaattcaaccaatgatttgggcatcaacgttgaagatccggaagcatgtgaatttcggtgacttagg-ttttatcatattatttg 23291569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 23 - 199
Target Start/End: Original strand, 3228261 - 3228437
Alignment:
Q  23 tgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaacc 121  Q
    ||||||||||||||||||||| | ||| ||||||| ||||||||||||||||||||||||||||||| |||||| | ||||||||||| ||||| ||| |    
T  3228261 tgttgttcgtcgtcttgtgcggcatttgatttcgcatcttgtcgcggtgtttgtttagttcctattgaaagatcgatatcagtcaattacaaatacaatc 3228360  T
Q  122 aattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||| ||||||||| |||||||||||||||  || |||| | |||||  ||| ||||| ||||||||||||||||||||    
T  3228361 aatgatttgggcgtcaacgttgcagatccgaaatcatggatatttcgatgatttagg-ttttatcatattatttgtag 3228437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 8212029 - 8211835
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||| ||||||||| |||||||| |||||||||||| ||||| ||| | |||||||||||| ||||  ||||||| |||||| |||||||||||||    
T  8212029 tcgtctaaatgcggcgttgtgttgttcatcgtcttgtgcggcgtttgattccacgtcttgtcgcgatgttcatttagttactattgaaagatctacatca 8211930  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||| | |||||||||||||| || | |||| ||| ||||||||||| ||||||||   |||||| ||||||||| ||||||||||||||||||||    
T  8211929 gtcaaatacaaattcaaccaatgatct-ggcgtcaatgttgcagatccggaagcatgggtatttcaatgacttagg-ttttatcatattatttgtag 8211835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 4 - 195
Target Start/End: Original strand, 32394971 - 32395162
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    ||||| |||||||||||| ||||| || |||||||||||  ||||| ||||| ||| || |||||||||||||| ||||||||||| |||||||||||||    
T  32394971 tcgttcaagtgcggcgttgtgttgctcatcgtcttgtgcaacgtttgatttcccgttttatcgcggtgtttgttcagttcctattgaaagatctacatca 32395070  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattattt 195  Q
     |||||| |||||||||||||| |||||| || ||||||||||||| |  |||||||   ||||| |||||||| | ||||||||||||||||    
T  32395071 ttcaattacaaattcaaccaatgatttggacgtcaacgttgcagattcgaaagcatgggtatttcggtgacttaag-ttttatcatattattt 32395162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 50 - 195
Target Start/End: Complemental strand, 29738736 - 29738592
Alignment:
Q  50 atttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatc 149  Q
    ||||| ||||||| |||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| | ||||||| ||| |||||| |||    
T  29738736 atttcacgtcttgccgcgatgtttgtttagtttctattggaagatctacatcagtcaattacaaattcaaccaatgacttgggcgtcaatgttgcaaatc 29738637  T
Q  150 cagaagcatgaaaatttcagtgacttaggcttttatcatattattt 195  Q
    | ||||||||   |||||||||||||||| | ||||||||||||||    
T  29738636 cggaagcatgtgtatttcagtgacttagg-tgttatcatattattt 29738592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 9 - 108
Target Start/End: Complemental strand, 11462562 - 11462462
Alignment:
Q  9 taagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaa 107  Q
    ||||| |||| |||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11462562 taagtccggcattttgttgttcgtcgtcttgtgcggcgtttgatttcacgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaa 11462463  T
Q  108 t 108  Q
    |    
T  11462462 t 11462462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 44915609 - 44915807
Alignment:
Q  1 tcatcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctaca 99  Q
    ||||||| ||| || |||||| || |||| ||| | ||||||| | ||| |||| |||| ||||||||||||| ||||||||| ||||| |||||| |||    
T  44915609 tcatcgtctaattgtggcgttgtgatgttagtcatattgtgcggcatttgattttgcgttttgtcgcggtgttcgtttagttcatattgaaagatcaaca 44915708  T
Q  100 tcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    |||||||||| ||||||||| |||| ||||||||| ||| ||||||||||| |||||||||  ||||| ||  |||| | ||||||||||||||||||||    
T  44915709 tcagtcaattacaaattcaatcaatgatttgggcgtcaatgttgcagatccggaagcatgagtatttcggtttctta-gattttatcatattatttgtag 44915807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 27456510 - 27456644
Alignment:
Q  1 tcatcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctaca 99  Q
    ||||||| ||| ||||||||| ||||||| ||| ||||||||  ||||| ||||||||||||||||||||||| ||||||||||||||| |||||| |||    
T  27456510 tcatcgtctaattgcggcgttgtgttgttagtcatcttgtgcaacgtttgatttcgcgtcttgtcgcggtgttcgtttagttcctattgaaagatcgaca 27456609  T
Q  100 tcagtcaattgcaaattcaaccaattatttgggcg 134  Q
    |||||||||| ||| ||||| |||| |||||||||    
T  27456610 tcagtcaattacaagttcaatcaatgatttgggcg 27456644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 4 - 159
Target Start/End: Original strand, 21686846 - 21687002
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||| ||||||| ||||||||||||||||||||| ||||| |||| |||| ||||||||||||||||| | ||||||||| |||||   |||||    
T  21686846 tcgtctaagtacggcgttgtgttgttcgtcgtcttgtgcggcgtttgattttgcgttttgtcgcggtgtttgttaatttcctattgaaagataggcatca 21686945  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatg 159  Q
     ||||||  ||||||||||||| ||||||||| |||| ||| |||||| ||||||||    
T  21686946 ctcaattaaaaattcaaccaatgatttgggcgtcaacattgaagatccggaagcatg 21687002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 4 - 194
Target Start/End: Complemental strand, 27580247 - 27580057
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||||||| ||||||||| ||||||||||||| | ||| | | ||| |||| ||||||||||||||||||  |||||||||||||| |||||| || |||    
T  27580247 tcgtttaaatgcggcgttgtgttgttcgtcgtatcgtgtggcatttgattttgcgtcttgtcgcggtgttcatttagttcctattgaaagatcgacttca 27580148  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatt 194  Q
    || |||| |||||||||  ||| ||||||||| |||| |||||||| |  ||||||||  ||||| |||||||| | |||||||||||||||    
T  27580147 gtaaattacaaattcaataaatgatttgggcgtcaacattgcagattcgaaagcatgagtatttcggtgactta-gattttatcatattatt 27580057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 940336 - 940456
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||| ||| ||||||| ||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||| || || ||||||     
T  940336 tcgtctaagtgcggtgttgtgttgtttgtcgtcttgtgcgacgtttgatttcgcgtcttgtcgcggtgttcgtttaattcctattgaaatatatacatct 940435  T
Q  103 gtcaattgcaaattcaaccaat 124  Q
    ||||||| |||| |||||||||    
T  940436 gtcaattacaaa-tcaaccaat 940456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 4 - 194
Target Start/End: Complemental strand, 35462156 - 35461978
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcgcgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcag 103  Q
    |||| ||||||||||||| ||||||||||||||||||||            |||| ||||||||||||||||| | ||||| |||  ||||||| |||||    
T  35462156 tcgtgtaagtgcggcgttgtgttgttcgtcgtcttgtgca-----------gcgttttgtcgcggtgtttgttcatttcctcttgagagatctatatcag 35462068  T
Q  104 tcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatt 194  Q
    |||||| |||||| ||||||| ||| || || ||||||||||||||| ||||||||   ||||| |||||||| | |||||||||||||||    
T  35462067 tcaattacaaattaaaccaatgattcggacgtcaacgttgcagatccggaagcatgtgtatttcggtgacttaag-ttttatcatattatt 35461978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 28 - 129
Target Start/End: Complemental strand, 36894365 - 36894262
Alignment:
Q  28 ttcgtcgtcttgtgcg--cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaatt 125  Q
    ||||| ||||||||||  ||||| ||||||||| ||||||||| ||||||| ||||||| ||| |||||||||||||||||||| ||||||||||||||     
T  36894365 ttcgttgtcttgtgcgggcgtttgatttcgcgttttgtcgcggggtttgttcagttcctcttgaaagatctacatcagtcaattacaaattcaaccaata 36894266  T
Q  126 attt 129  Q
    ||||    
T  36894265 attt 36894262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 51916783 - 51916599
Alignment:
Q  1 tcatcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctaca 99  Q
    ||||||| ||| | ||| ||| ||||||| ||||||||||||| | ||| ||||||||||||||||||||  | ||||||||||||||| ||||   ||     
T  51916783 tcatcgtctaattacggtgttatgttgttagtcgtcttgtgcggcatttgatttcgcgtcttgtcgcggt--tcgtttagttcctattgaaagaa--acg 51916688  T
Q  100 tcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 190  Q
    |||||||||| ||||||||| |||| ||||| ||| ||||||||||||| | |||||||||  ||||| |||||||| | |||||||||||    
T  51916687 tcagtcaattacaaattcaatcaatgatttgagcgtcaacgttgcagatacggaagcatgagtatttc-gtgactta-gattttatcatat 51916599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 125 - 199
Target Start/End: Original strand, 4413209 - 4413282
Alignment:
Q  125 tatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    |||||||||| ||||||||||||||| |||||||||| ||||| |||||||||| ||||||||||||||||||||    
T  4413209 tatttgggcgtcaacgttgcagatccggaagcatgaatatttcggtgacttagg-ttttatcatattatttgtag 4413282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 50377301 - 50377417
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||| ||||||| ||||||||||||| || || | | ||| ||||||||||||||||||||||  ||||||| ||||||| |||||| ||||||    
T  50377301 tcgtctaagtacggcgttgtgttgttcgtcgttttttgtggcatttgatttcgcgtcttgtcgcggtgtacgtttagtccctattgaaagatcgacatca 50377400  T
Q  103 gtcaattgcaaattcaa 119  Q
    ||||||| |||| ||||    
T  50377401 gtcaattacaaagtcaa 50377417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 99 - 203
Target Start/End: Complemental strand, 15431689 - 15431586
Alignment:
Q  99 atcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgta 198  Q
    ||||| ||||| ||||||||| |||| ||||||||| ||||||||||||||  | |||||  | ||||||||||| || | |||||||||||||||||||    
T  15431689 atcagccaattacaaattcaatcaatgatttgggcgtcaacgttgcagatctggcagcattgatatttcagtgacata-gattttatcatattatttgta 15431591  T
Q  199 gacat 203  Q
    |||||    
T  15431590 gacat 15431586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 4 - 195
Target Start/End: Original strand, 31984151 - 31984325
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcgcgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcag 103  Q
    |||| ||||||||||||| ||||||| | |||   ||| |||||| |||||| ||||||||||||||||  |||||||||||||| || ||| |||||||    
T  31984151 tcgtctaagtgcggcgttgtgttgtttgccgt---gtg-gcgtttgatttcgtgtcttgtcgcggtgttcatttagttcctattgaaatatcgacatcag 31984246  T
Q  104 tcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattattt 195  Q
    |||||            |||| ||||||||| |||||||||| |||| ||||||||   ||||| |||||||||| ||||||||||||||||    
T  31984247 tcaat------------caatgatttgggcgtcaacgttgcaaatccggaagcatgggtatttcggtgacttagg-ttttatcatattattt 31984325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 11 - 160
Target Start/End: Original strand, 47132880 - 47133033
Alignment:
Q  11 agtgcggcgttttgttgttcgtcgtcttgtgcg----cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtca 106  Q
    |||| |||||| ||||||||||||| |||||||     ||||||||||||||||||| |||||||| ||||  ||| ||||| ||||||  | |||||||    
T  47132880 agtggggcgttgtgttgttcgtcgttttgtgcggcgttgtttaatttcgcgtcttgttgcggtgttcgtttgcttcatattgaaagatcagcttcagtca 47132979  T
Q  107 attgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatga 160  Q
    ||  || |||||| | || |||||| || |||| |||||||||| |||||||||    
T  47132980 atcacagattcaatcgatgatttggacgtcaacattgcagatccggaagcatga 47133033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 113 - 199
Target Start/End: Original strand, 16989454 - 16989539
Alignment:
Q  113 aattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    |||||||||||| ||||| ||| ||| |||| |||||| ||| ||||  ||||||||||||||||| ||||||||||||||||||||    
T  16989454 aattcaaccaataatttgagcgtcaaggttgaagatccggaatcatgtgaatttcagtgacttagg-ttttatcatattatttgtag 16989539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 15434994 - 15434893
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgc-gcgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| |||||||||| ||||||||| |||||| |||| ||||||||||| | ||||  |||| ||||| ||| |||||| ||||||    
T  15434994 tcgtctaagtgcggcgttctgttgttcgttgtcttgtgcggcgtttgattttgcgtcttgtcgtgatgttcatttaattcctcttgaaagatcgacatca 15434895  T
Q  103 gt 104  Q
    ||    
T  15434894 gt 15434893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 13144931 - 13144736
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||| ||||||||| ||||||  || |||||||||  | ||| ||||||||||||||||  |||||  |||  ||| ||||| |||| | || | |    
T  13144931 tcgtctaaatgcggcgttgtgttgtctgttgtcttgtgcaacatttgatttcgcgtcttgtcgtagtgttcatttgattcatattgaaagaccgacttta 13144832  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
     |||||| ||||||||| |||| |||||| || |||  |||||||||   ||||||||  |||||||||||||| | |||||||||| |||||||||    
T  13144831 atcaattacaaattcaatcaatgatttggacgtcaattttgcagatctgaaagcatgagtatttcagtgactta-gattttatcataatatttgtag 13144736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 49504633 - 49504557
Alignment:
Q  84 tattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatga 160  Q
    ||||| ||||||||||||| |||||| |||| |||| |||| ||||||  | ||||||||||||||| |||||||||    
T  49504633 tattgaaagatctacatcaatcaattacaaactcaaacaatgatttggatgtcaacgttgcagatccggaagcatga 49504557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 45 - 199
Target Start/End: Original strand, 24582966 - 24583118
Alignment:
Q  45 gtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgc 144  Q
    |||| |||| || |||||| |||||||| |||  |||| ||||| ||||||  | |||||||||  || |||||| |||| |||||| || |||||||||    
T  24582966 gtttgatttggcatcttgttgcggtgttcgttg-gttcatattgaaagatcagcttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgc 24583064  T
Q  145 agatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||||||||| ||| |||   |||| ||| | || |||||||||||||||||    
T  24583065 agatccagaagcaagaatattctggtgattta-gattatatcatattatttgtag 24583118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 65 - 159
Target Start/End: Complemental strand, 36775767 - 36775673
Alignment:
Q  65 gcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatg 159  Q
    ||||| || |||| |||| ||||| ||||||  | |||| ||||  ||||||||| |||| ||||||||| ||||||||||||||||||| ||||    
T  36775767 gcggtattcgtttggttcgtattgaaagatcggcttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaaacatg 36775673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 157
Target Start/End: Original strand, 49626903 - 49627040
Alignment:
Q  23 tgttgttcgtcgtcttgtgcgc----gtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattca 118  Q
    |||||||||||||||||||||     |||| ||||  | |||||| |||||||| |||  |||| ||||| ||||||  | |||||||||  ||||||||    
T  49626903 tgttgttcgtcgtcttgtgcggcgttgtttgatttgacatcttgttgcggtgttcgttg-gttcatattgaaagatcagcttcagtcaatcacaaattca 49627001  T
Q  119 accaattatttgggcggcaacgttgcagatccagaagca 157  Q
    | |||| |||||| || ||||||||||||| ||||||||    
T  49627002 atcaatgatttggacgtcaacgttgcagatgcagaagca 49627040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 159
Target Start/End: Complemental strand, 37720204 - 37720112
Alignment:
Q  67 ggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatg 159  Q
    |||||| |||| |||| ||||| |||||| || |||| ||||  ||||||||   ||| ||||||||| |||||||||||||||| |||||||    
T  37720204 ggtgttcgtttggttcgtattgaaagatcaacttcagacaatcacaaattcatttaatgatttgggcgtcaacgttgcagatccaaaagcatg 37720112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 45 - 160
Target Start/End: Original strand, 16262876 - 16262991
Alignment:
Q  45 gtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgc 144  Q
    |||| |||||||||||||| | |||||| ||||  ||| ||||| || ||| ||  ||||||||  || |||||| |||| ||||| ||  |||||||||    
T  16262876 gtttgatttcgcgtcttgttgtggtgttcgtttgattcatattgaaaaatcaactgcagtcaatcacatattcaatcaatgatttgtgcatcaacgttgc 16262975  T
Q  145 agatccagaagcatga 160  Q
    |||||| |||||||||    
T  16262976 agatccggaagcatga 16262991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 30879064 - 30879110
Alignment:
Q  1 tcatcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcgcgtt 47  Q
    ||||| |||||||| || | |||||||||||||||||||||||||||    
T  30879064 tcatcatttaagtgtggtgatttgttgttcgtcgtcttgtgcgcgtt 30879110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 159
Target Start/End: Original strand, 48750220 - 48750314
Alignment:
Q  65 gcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatg 159  Q
    |||||||| ||||  ||| ||||| ||||||  | |||| ||||  |||||| || |||| ||||||||| |||||||||||||||| |||||||    
T  48750220 gcggtgttcgtttgattcgtattgaaagatcagcttcagacaatcacaaatttaatcaatgatttgggcgtcaacgttgcagatccataagcatg 48750314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 114 - 199
Target Start/End: Original strand, 44543356 - 44543440
Alignment:
Q  114 attcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    |||||| |||| |||||| || |||||||||||||||||||||| ||  |||  ||||| ||| | || |||||||||||||||||    
T  44543356 attcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctagtgattta-gattatatcatattatttgtag 44543440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 199
Target Start/End: Original strand, 31317821 - 31317904
Alignment:
Q  115 ttcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||| |||| ||||||||| ||||||| |||| || |||||||| | ||||| |||| ||||  ||| ||||||||||||||||    
T  31317821 ttcaatcaatgatttgggcgtcaacgttacagacccggaagcatggatatttcggtgatttagaattt-atcatattatttgtag 31317904  T

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Target: chr7 (Bit Score: 120; Significance: 1e-61; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 4 - 198
Target Start/End: Complemental strand, 12141427 - 12141233
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||||||||||| ||||||||||||| | ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12141427 tcgtctaagtgcggcgttttgttgtttgtcgtcttgtgcggcatttgatttcgcgtcttgtcacggtgtttgtttagttcctattggaagatctacatca 12141328  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgta 198  Q
    ||||||| |||||||||||||| |||||| || ||||||||||||||| ||||||||   ||||| |||||||| | |||||||||||||||||||    
T  12141327 gtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgactta-gattttatcatattatttgta 12141233  T

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Target: chr7; HSP #2
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 37837572 - 37837382
Alignment:
Q  9 taagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaa 107  Q
    ||||||||||||| ||||||||||||||||||||| ||||| |||| |||||||||||||||||| ||||||||||||||| |||||| |||||||||||    
T  37837572 taagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgattttgcgtcttgtcgcggtgttcgtttagttcctattgaaagatcgacatcagtcaa 37837473  T
Q  108 ttgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    || |||||||||||||| ||||||||| ||||||||||||||| ||||||||  |||||| |||||||||| ||||||||||||| ||||||    
T  37837472 ttacaaattcaaccaatgatttgggcgtcaacgttgcagatccggaagcatgtgaatttcggtgacttagg-ttttatcatattacttgtag 37837382  T

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Target: chr7; HSP #3
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 4 - 195
Target Start/End: Complemental strand, 8001665 - 8001474
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||| ||||||||||| |||||||||||||    
T  8001665 tcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttgtcgtggtgtttgttcagttcctattgaaagatctacatca 8001566  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattattt 195  Q
     |||||| ||||||||| |||| |||||| || ||||||||||||| | ||| |||||  ||||| |||||||||| ||||||||||||||||    
T  8001565 atcaattacaaattcaagcaatgatttggacgtcaacgttgcagattcggaatcatgagtatttcggtgacttagg-ttttatcatattattt 8001474  T

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Target: chr7; HSP #4
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 4 - 195
Target Start/End: Complemental strand, 30756938 - 30756747
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||| |||| |||||| |||||||||||||    
T  30756938 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcgcggtgtttgttcagtttctattgaaagatctacatca 30756839  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattattt 195  Q
    ||||||| |||||||||||||| |||||| |  ||||||||||||||| |||||||||  ||||| |||||||| | ||||||||||||||||    
T  30756838 gtcaattacaaattcaaccaataatttggacatcaacgttgcagatccggaagcatgagtatttcggtgacttaag-ttttatcatattattt 30756747  T

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Target: chr7; HSP #5
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 48061394 - 48061589
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| |||||||||| ||||||||||||||||||| |||| ||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||| |    
T  48061394 tcgtctaagtgcggcattttgttgttcgtcgtcttatgcgacgtttgattttgcgtcttgtcgcggtgtttgtttagttcctattgaaagatctacatta 48061493  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| ||||||||||||||  |||| ||| |||||||||||||||  ||||||||  ||||| |||| ||||| ||||||||||||||||||||    
T  48061494 gtcaattacaaattcaaccaatggtttgagcgtcaacgttgcagatccttaagcatgagtatttcggtgatttagg-ttttatcatattatttgtag 48061589  T

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Target: chr7; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 47590288 - 47590478
Alignment:
Q  9 taagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaa 107  Q
    ||||||||||||| ||||||||||||||||||||| ||||| |||| |||||||| |||||||||||| || ||||||||| |||||||||||| |||||    
T  47590288 taagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgattttgcgtcttgccgcggtgtttgtataattcctattgaaagatctacatccgtcaa 47590387  T
Q  108 ttgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    || |||||||||||||| ||||||||| |||||||||| |||| |||||||||  ||||| | |||||||| ||||||||||||||||||||    
T  47590388 ttacaaattcaaccaatgatttgggcgtcaacgttgcacatccggaagcatgagtatttcggcgacttagg-ttttatcatattatttgtag 47590478  T

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Target: chr7; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 19296842 - 19297037
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||| | ||||||||||||||||| ||||||| ||| |||||||||||||    
T  19296842 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcattttgtcgcggtgtttgttcagttcctcttgaaagatctacatca 19296941  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| |||||||||||||| |||||| || ||||||||||||||| ||||||||   ||||| || ||||| | ||||||||||||||||||||    
T  19296942 gtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtaacttaag-ttttatcatattatttgtag 19297037  T

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Target: chr7; HSP #8
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 9450256 - 9450061
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| |||||| |||||| ||||||||||||||||||||| ||||| ||||||| | ||||||||||||||||| ||||||||||| |||||||||||||    
T  9450256 tcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcattttgtcgcggtgtttgttcagttcctattgaaagatctacatca 9450157  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
     |||||| ||||||||| |||| |||||| || ||||||||||||||| ||||||||   |||| ||||| ||||| ||||||||||||||||||||    
T  9450156 atcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgggtattttagtgatttagg-ttttatcatattatttgtag 9450061  T

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Target: chr7; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 48316931 - 48316736
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgc-gcgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||| ||||||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  48316931 tcgtctaagtacggcgttgtgttgttcgtcgtcttgtgcagcgtttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctacatca 48316832  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
     |||||| ||||||||| |||| |||||| || ||||| ||||||||| ||||||||   ||||| | || ||||| ||||||||||||||||||||    
T  48316831 atcaattacaaattcaagcaatgatttggacgtcaacgctgcagatccggaagcatgggtatttcggcgatttagg-ttttatcatattatttgtag 48316736  T

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Target: chr7; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 4 - 198
Target Start/End: Complemental strand, 34899726 - 34899532
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||| | ||||||||||||||||| ||||||| ||| |||||||||||||    
T  34899726 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgctttttgtcgcggtgtttgttcagttcctcttgaaagatctacatca 34899627  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgta 198  Q
    ||||||| |||||||||||||| |||||| || |||||||||| || | ||||||||   ||||| |||||||| | |||||||||||||||||||    
T  34899626 gtcaattacaaattcaaccaatgatttggacgtcaacgttgcaaattcggaagcatgggtatttcggtgacttaag-ttttatcatattatttgta 34899532  T

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Target: chr7; HSP #11
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 4 - 203
Target Start/End: Original strand, 24770218 - 24770417
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||| ||| |||||||||||||||| |||| ||||| |||||| |||||||||||||||| ||||| ||| ||||| ||||||  |||||    
T  24770218 tcgtctaagtgcggtgttgtgttgttcgtcgtcttatgcgacgtttgatttcgtgtcttgtcgcggtgttcgtttatttcttattgaaagatcggcatca 24770317  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagaca 202  Q
    ||||||  |||||||||||||| ||||||||| |||||||| |||||||||||||||  |||||| | |||||||| ||||||||||||||| |||||||    
T  24770318 gtcaatcacaaattcaaccaatgatttgggcgtcaacgttgaagatccagaagcatgtgaatttcggagacttagg-ttttatcatattattggtagaca 24770416  T

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Target: chr7; HSP #12
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 39328909 - 39328722
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||| ||||||| ||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||| ||||||||| ||||||  |||||    
T  39328909 tcgtctaagtacggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcgcggtgtttgtttatttcctattgaaagatcggcatca 39328810  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatatt 191  Q
    ||||||| |||||||||||||| ||||||||| |||||||| ||||||  |||||||  ||| || |||||||||| ||||||||||||    
T  39328809 gtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccgaaagcatgtgaatctcggtgacttagg-ttttatcatatt 39328722  T

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Target: chr7; HSP #13
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 42978582 - 42978777
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||| ||| || |||||||||| ||||||||| ||||| |||||| ||||||    
T  42978582 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttctcgttttatcgcggtgttcgtttagttcttattgaaagatcgacatca 42978681  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||  |||||||||||||| ||||||||| ||||||||||||||| |||| |||   ||||| |||||||||| |||||||||||||| |||||    
T  42978682 gtcaataacaaattcaaccaatgatttgggcgtcaacgttgcagatccggaaggatgggtatttcggtgacttagg-ttttatcatattatatgtag 42978777  T

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Target: chr7; HSP #14
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 39171704 - 39171514
Alignment:
Q  9 taagtgcggcgttttgttgttcgtcgtcttgtgc-gcgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaa 107  Q
    ||||||| |||||||||||||||||||||||||| |||||| ||||  ||||||||| || |||||||| |||||| |||| ||||||||||||| ||||    
T  39171704 taagtgctgcgttttgttgttcgtcgtcttgtgcagcgtttgattttacgtcttgtcacgatgtttgttcagttccaattgaaagatctacatcaatcaa 39171605  T
Q  108 ttgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    || ||||||||| |||| |||||| || ||||||||||||||| ||||||||   ||||| |||||||||| ||||||||||||||||||||    
T  39171604 ttacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttagg-ttttatcatattatttgtag 39171514  T

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Target: chr7; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 38798753 - 38798948
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||| || |||| ||||||||||||||||||||| ||||| |||| |||| ||||||| ||||||||||| ||||||||| ||||||  |||||    
T  38798753 tcgtctaagtacgacgttgtgttgttcgtcgtcttgtgcggcgtttgattttgcgttttgtcgcagtgtttgtttatttcctattgaaagatcggcatca 38798852  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| |||||||||||||| ||||||||| |||| ||| |||||| ||||||||  |||||| |||||||| | ||||||||||||||||||||    
T  38798853 gtcaattacaaattcaaccaatgatttgggcgtcaacattgaagatccggaagcatgtgaatttcggtgactta-gattttatcatattatttgtag 38798948  T

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Target: chr7; HSP #16
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 19404876 - 19404681
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| | ||||||||||||||||||  ||||| |||| || |||||||||||||||  |||||||||| ||| |||||  |||||     
T  19404876 tcgtctaagtgcggcgttctattgttcgtcgtcttgtgcatcgtttgattttgcatcttgtcgcggtgttcttttagttcctcttgaaagattgacatct 19404777  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| ||||||||| |||| ||||||||| ||| ||||||||||| |||||||||  |||||||||||||| | ||||||||||||||||||||    
T  19404776 gtcaattacaaattcaatcaatgatttgggcgtcaatgttgcagatccggaagcatgagtatttcagtgactta-gattttatcatattatttgtag 19404681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 45349918 - 45349723
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| |||||| |||||| ||||||||||||| ||||| | ||||| ||||||||||||||||||||||| ||||||||||||||| |||||   |||||    
T  45349918 tcgtctaagtgtggcgttgtgttgttcgtcgttttgtgtggcgtttgatttcgcgtcttgtcgcggtgttcgtttagttcctattgaaagattggcatca 45349819  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| ||||||||| |||| |||| |||| |||| |||||||||  ||||||||  |||||| |||| ||||| ||||||||||||||||||||    
T  45349818 gtcaattacaaattcaagcaatgattttggcgtcaacattgcagatctggaagcatgtgaatttcggtgatttagg-ttttatcatattatttgtag 45349723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 13797051 - 13796853
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgt---cttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctaca 99  Q
    |||| ||||||||||||| |||||||||| ||   |||||||| ||||| |||||| |||||||| ||||||| ||||||||| ||||| |||||| |||    
T  13797051 tcgtctaagtgcggcgttgtgttgttcgttgtgatcttgtgcgacgtttgatttcgtgtcttgtctcggtgttcgtttagttcatattgaaagatcgaca 13796952  T
Q  100 tcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    |||||||||  |||| ||||||||| |||||  || ||||||||||||||| |||||||||  ||||  |||||||| | ||||||||||||||||||||    
T  13796951 tcagtcaataacaaagtcaaccaatgatttgaccgtcaacgttgcagatccggaagcatgagtatttaggtgacttaag-ttttatcatattatttgtag 13796853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 195
Target Start/End: Original strand, 46700026 - 46700198
Alignment:
Q  23 tgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaacc 121  Q
    |||||||||||||||| |||| ||||| ||||| |||||||||| |||||| ||||||||||||||| || ||| ||||||||||| | ||||||||| |    
T  46700026 tgttgttcgtcgtcttctgcggcgtttgatttcacgtcttgtcgtggtgttcgtttagttcctattgaaatatcgacatcagtcaactacaaattcaatc 46700125  T
Q  122 aattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattattt 195  Q
    ||| ||||||||  || |||||||||||| |||||||| | ||||| |||||||| | ||||||||||||||||    
T  46700126 aatgatttgggcatcagcgttgcagatccggaagcatggatatttcggtgactta-gattttatcatattattt 46700198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 23 - 195
Target Start/End: Original strand, 5792787 - 5792959
Alignment:
Q  23 tgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaacc 121  Q
    ||||||| ||| ||||||||| ||||| ||||||||||||||| | ||||| ||||||||||||||| |||||| ||||||||||||| ||| || || |    
T  5792787 tgttgttagtcatcttgtgcgacgtttgatttcgcgtcttgtcacagtgttcgtttagttcctattgaaagatcgacatcagtcaattacaagttaaatc 5792886  T
Q  122 aattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattattt 195  Q
    ||| |||||| || ||||||||||||||  ||||||| | ||||||  |||||||   ||||||||||||||||    
T  5792887 aatgatttggacgtcaacgttgcagatctggaagcataagaatttcgatgactta-tattttatcatattattt 5792959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 4 - 142
Target Start/End: Complemental strand, 9977325 - 9977186
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||| ||||| | ||||||||||||||||  | ||||| ||||||||||||||||||||| |  |||||||||||||| |||||| || |||    
T  9977325 tcgtctaagtgcagcgttgtattgttcgtcgtcttgtttggcgtttgatttcgcgtcttgtcgcggtgctcatttagttcctattgaaagatcgacttca 9977226  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgtt 142  Q
    ||||||| ||||||||| |||| ||||||||| |||||||    
T  9977225 gtcaattacaaattcaaacaatgatttgggcgtcaacgtt 9977186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 25287300 - 25287110
Alignment:
Q  9 taagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaa 107  Q
    |||||| |||||| ||||||||||||||||||||| | ||| ||||| | |||||||||||||||  |||| ||| ||||| |||||  |||||| ||||    
T  25287300 taagtgtggcgttgtgttgttcgtcgtcttgtgcgacatttgatttcacatcttgtcgcggtgttcatttacttcttattgaaagattgacatcaatcaa 25287201  T
Q  108 ttgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    || ||||||||| |||| ||||| ||| |||  || ||||||   ||||||| | ||||| |||||||| | ||||||||||||||||||||    
T  25287200 ttacaaattcaatcaatgatttgagcgtcaatattacagatctgaaagcatggatatttcggtgactta-gattttatcatattatttgtag 25287110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 65 - 199
Target Start/End: Original strand, 40993191 - 40993324
Alignment:
Q  65 gcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaat 164  Q
    |||||||||||| ||||||||||| |||||||||||||||||||| |||||||||| ||  ||||||    |||||||||| || ||||||||||   ||    
T  40993191 gcggtgtttgttcagttcctattgaaagatctacatcagtcaattacaaattcaacaaaagatttggatttcaacgttgcatattcagaagcatgggtat 40993290  T
Q  165 ttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||| |||||||| | ||||||||||||||||||||    
T  40993291 ttcggtgacttaag-ttttatcatattatttgtag 40993324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 50 - 203
Target Start/End: Complemental strand, 28044828 - 28044676
Alignment:
Q  50 atttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatc 149  Q
    ||||| ||||||||||||||||||||| ||||| ||||| |||||||| |||| ||||||  |||||||| || | |||||  || ||||||||||||||    
T  28044828 atttctcgtcttgtcgcggtgtttgttcagttcttattgaaagatctatatcaatcaattataaattcaagcattgatttgaacgtcaacgttgcagatc 28044729  T
Q  150 cagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacat 203  Q
    | ||| ||||   ||||| |||| ||||| |||||||||||||||| |||||||    
T  28044728 cggaaacatgggtatttcggtgatttagg-ttttatcatattatttttagacat 28044676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 9 - 176
Target Start/End: Complemental strand, 3267326 - 3267163
Alignment:
Q  9 taagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaa 107  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||||||| || ||||||| ||||| ||| ||||| |||||| ||  |||||||    
T  3267326 taagtgcggcgttttgttgttcgtcgtcttgtgcgacgtttgatttcgcgtcttatcacggtgttcgtttaattcatattgaaagatcgactccagtcaa 3267227  T
Q  108 ttgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgactta 176  Q
    || |||||     |||| |||| |||| |||| ||||| ||||  ||||||| | ||||| ||||||||    
T  3267226 ttacaaat-----caatgatttaggcgtcaacattgcacatccgaaagcatggagatttcggtgactta 3267163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 26623912 - 26623792
Alignment:
Q  1 tcatcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctaca 99  Q
    ||||||| | ||||||||||| |||||||||||||||||| || ||||| |||| || |||||| ||||||||||||| |||||||||| |||||| ||     
T  26623912 tcatcgtctgagtgcggcgttgtgttgttcgtcgtcttgtacggcgtttgattttgcatcttgttgcggtgtttgtttggttcctattgaaagatcaact 26623813  T
Q  100 tca-gtcaattgcaaattcaa 119  Q
    ||| |||||||||| ||||||    
T  26623812 tcaggtcaattgcatattcaa 26623792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 199
Target Start/End: Original strand, 39229006 - 39229181
Alignment:
Q  23 tgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaacc 121  Q
    ||||||||||||||||||||| ||||  |||||||||||||| | | |||  |||| ||| |||||| |||||| || |||||||||| || ||||||||    
T  39229006 tgttgttcgtcgtcttgtgcggcgttagatttcgcgtcttgttgtgatgtc-gtttggtttctattgaaagatcaacttcagtcaattacagattcaacc 39229104  T
Q  122 aattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
     || | ||||||| | ||||||||||||  ||||||||   ||||||| |||||| |  |||||||||| ||||||||    
T  39229105 gatgacttgggcgtcgacgttgcagatctggaagcatgtgtatttcagggactta-gaatttatcatataatttgtag 39229181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 67 - 160
Target Start/End: Original strand, 35132983 - 35133076
Alignment:
Q  67 ggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatga 160  Q
    |||||| |||| |||| ||||| |||||| || |||| ||||  ||||||||| |||| ||||||||| |||||||||||||||| ||||||||    
T  35132983 ggtgttcgtttggttcgtattgaaagatcaacttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccaaaagcatga 35133076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 11 - 177
Target Start/End: Original strand, 25255206 - 25255373
Alignment:
Q  11 agtgcggcgttttgttgttcgtcgtcttgtgc-gcgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaatt 109  Q
    ||||||||||| |||| |||| |||||||||| |||||| |||||  |||| || ||||||||  |||||||||||| | ||  || || ||| ||||||    
T  25255206 agtgcggcgttgtgttattcgccgtcttgtgcagcgtttgatttcatgtctcgttgcggtgttcatttagttcctatcgaaatgtcaacttcaatcaatt 25255305  T
Q  110 gcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttag 177  Q
      | |||||| |||||||||||||  | | ||||||||||| ||||||||   |||| ||||||||||    
T  25255306 atagattcaatcaattatttgggcatcgatgttgcagatcctgaagcatgggcattttagtgacttag 25255373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 159
Target Start/End: Complemental strand, 38880655 - 38880541
Alignment:
Q  45 gtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgc 144  Q
    |||| |||| || |||||| |||||||| |||| |||| ||||| ||||||  | |||||||||  ||||||||| |||| ||||||| | |||||||||    
T  38880655 gtttgattttgcatcttgttgcggtgttcgtttggttcttattgaaagatcagcttcagtcaatcacaaattcaatcaatgatttgggtgccaacgttgc 38880556  T
Q  145 agatccagaagcatg 159  Q
    |||||  ||||||||    
T  38880555 agatctggaagcatg 38880541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 11343832 - 11343929
Alignment:
Q  53 tcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatcc 150  Q
    ||||||||||| ||||||||||||| |||| ||||| |||||  |  |||||||||| |||||| ||  ||| |||||| || |||||||||||||||    
T  11343832 tcgcgtcttgttgcggtgtttgtttggttcatattgaaagattaaattcagtcaattacaaatttaattaatgatttggacgtcaacgttgcagatcc 11343929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 24350850 - 24350802
Alignment:
Q  111 caaattcaaccaattatttgggcggcaacgttgcagatccagaagcatg 159  Q
    ||||||||| |||| ||||||||| ||||||||||||||||||||||||    
T  24350850 caaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcatg 24350802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 160
Target Start/End: Original strand, 22742978 - 22743073
Alignment:
Q  65 gcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatga 160  Q
    |||| ||| |||| |||| ||||| ||||||  | |||| ||||  ||||||||| |||| ||||| ||| |||||||||||||||||||||||||    
T  22742978 gcggcgttcgtttggttcgtattgaaagatcagcttcagccaatcacaaattcaatcaatgatttgagcgtcaacgttgcagatccagaagcatga 22743073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 23 - 148
Target Start/End: Complemental strand, 5348692 - 5348566
Alignment:
Q  23 tgttgttcgtcgtcttgtgcgc-gtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaacc 121  Q
    |||||||||| || |||||||  |||| ||||  |||||| | |||||||| |||| |||||||||| |||||| |  ||| |||||| || |||||| |    
T  5348692 tgttgttcgttgttttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttggttcctattgaaagatcaatttcaatcaattacagattcaatc 5348593  T
Q  122 aattatttgggcggcaacgttgcagat 148  Q
    ||| ||||||||| | |||||||||||    
T  5348592 aatgatttgggcgtcgacgttgcagat 5348566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 65 - 155
Target Start/End: Original strand, 28476261 - 28476351
Alignment:
Q  65 gcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaag 155  Q
    |||||||| |||| |||| ||||| ||||||  | |||| ||||  ||||||||  |||| ||||||||| ||||||||||||||||||||    
T  28476261 gcggtgttcgtttggttcgtattgaaagatcagcttcagacaatcacaaattcattcaatgatttgggcgtcaacgttgcagatccagaag 28476351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 150
Target Start/End: Complemental strand, 28062267 - 28062195
Alignment:
Q  78 agttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatcc 150  Q
    |||| |||||| ||||||||||||| ||||||  |||||||| |||| |||||| || ||| |||||||||||    
T  28062267 agtttctattgaaagatctacatcaatcaattataaattcaagcaatgatttggacgtcaatgttgcagatcc 28062195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 100 - 203
Target Start/End: Complemental strand, 5000051 - 4999949
Alignment:
Q  100 tcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    |||||||||| ||||||||| ||||||||||| |  ||||||||| ||||  |||||||||| |||   |||| |||   |||||||||||||||| |||    
T  5000051 tcagtcaattacaaattcaatcaattatttggacttcaacgttgctgatctggaagcatgaatattctggtgattta-aattttatcatattatttatag 4999953  T
Q  200 acat 203  Q
    ||||    
T  4999952 acat 4999949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 159
Target Start/End: Original strand, 4530088 - 4530204
Alignment:
Q  43 gcgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgtt 142  Q
    |||||| |||| ||||||||| ||||||||   |||||| || ||| |||||| || ||||||| || ||||||||| | |  |||| ||||  ||||||    
T  4530088 gcgtttgattttgcgtcttgttgcggtgttcaattagttactgttgaaagatcaacttcagtcagttacaaattcaatccaagatttaggcgtaaacgtt 4530187  T
Q  143 gcagatccagaagcatg 159  Q
    | | |||||||||||||    
T  4530188 ggatatccagaagcatg 4530204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 117; Significance: 8e-60; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 7515321 - 7515126
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7515321 tcgtctaagtgcggcgttttgttgttcgtcgtcttgggcgacgtttgatttcgcgtcttgtcgcggtgtttgtttagttcctattggaatatctacatca 7515222  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
     |||||| |||||||||||||| |||| |||| |||||||||| |||| ||||||||   || || |||||||||| ||||||||||||||||||||    
T  7515221 ctcaattacaaattcaaccaatgatttaggcgtcaacgttgcaaatccggaagcatgtgtatgtcggtgacttagg-ttttatcatattatttgtag 7515126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 33053287 - 33053092
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||| ||||||| ||| |||||||||||||    
T  33053287 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcgcggtgtttgttcagttcctcttgaaagatctacatca 33053188  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| |||||||||||||| |||||  || ||||||||||||||| ||||||||   |||||||||||||| | ||||||||||||||||||||    
T  33053187 gtcaattacaaattcaaccaatgatttgaacgtcaacgttgcagatccggaagcatgggtatttcagtgacttaag-ttttatcatattatttgtag 33053092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 3913693 - 3913498
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| ||||||||||||||||||||  ||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  3913693 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcaacgtttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctacatca 3913594  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
     |||||| ||||||||| |||| |||| | || ||||||||||||||||||||||||   ||||| |||| ||||| ||||||||||||||||||||    
T  3913593 atcaattacaaattcaagcaatgatttagacgtcaacgttgcagatccagaagcatgggtatttcggtgatttagg-ttttatcatattatttgtag 3913498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 34018531 - 34018726
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| |||||| |||||| ||||||||||||||||||| | ||||| |||||  |||||||||||||||| ||||||||||||||| |||||| | ||||    
T  34018531 tcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgagacgtttgatttcatgtcttgtcgcggtgttcgtttagttcctattgaaagatcgagatca 34018630  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    || |||| |||||||||| ||| ||||||||| ||||||||||||||| |||||||||  |||||||||||||| | ||||||||||||||||||||    
T  34018631 gttaattacaaattcaactaatgatttgggcgtcaacgttgcagatccggaagcatgagtatttcagtgacttatg-ttttatcatattatttgtag 34018726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 606175 - 606370
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| ||||||||||| ||||||||| ||||| ||||||| | ||||||||||||||||| ||||||||||| |||||||||||||    
T  606175 tcgtctaagtgcggcgttgtgttgttcgtcatcttgtgcggcgtttgatttcgcattttgtcgcggtgtttgttcagttcctattgaaagatctacatca 606274  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    |||||||  ||||||||||||| |||||| |  ||||||||||||||| ||| ||||   ||||| |||||||| | ||||||||||||||||||||    
T  606275 gtcaattataaattcaaccaatgatttggacatcaacgttgcagatccggaaacatgggtatttcggtgacttaag-ttttatcatattatttgtag 606370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 23128586 - 23128784
Alignment:
Q  1 tcatcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctaca 99  Q
    ||||||| ||||||||||||| ||||||||||||||||||| | ||||| ||||||||| ||||||| ||||||||| ||||| ||||| |||||| |||    
T  23128586 tcatcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgtggcgtttgatttcgcgttttgtcgcagtgtttgttcagttcttattgaaagatcaaca 23128685  T
Q  100 tcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    |||||||||| ||||||||| |||| ||||||  | |||||||| |||||| ||||||||   ||||| |||||||| | ||||||||||||||||||||    
T  23128686 tcagtcaattacaaattcaatcaatgatttggatgtcaacgttgtagatccggaagcatgggtatttcggtgacttaag-ttttatcatattatttgtag 23128784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 4 - 195
Target Start/End: Complemental strand, 29319997 - 29319806
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| ||||||||||| |||| |||| ||||| ||||||||||||||||||||||||||| | ||| ||||| |||||||||||||    
T  29319997 tcgtctaagtgcggcgttgtgttgttcgtcctcttatgcggcgtttgatttcgcgtcttgtcgcggtgtttgttaacttcatattgaaagatctacatca 29319898  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattattt 195  Q
    ||||||| |||||||||||||| |||||  || |||||||||| |||| ||||||||   ||||  |||||||| | ||||||||||||||||    
T  29319897 gtcaattacaaattcaaccaatgatttgaacgtcaacgttgcaaatccggaagcatgtgtattttggtgacttaag-ttttatcatattattt 29319806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 32327331 - 32327141
Alignment:
Q  9 taagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaa 107  Q
    ||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||| || | || |||||| ||||||||||||| ||||    
T  32327331 taagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttgtcgcggtgtttattcaatttctattgaaagatctacatcaatcaa 32327232  T
Q  108 ttgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    || ||||||||| |||| |||| | ||  |||||||||||||| |||||||||  | ||  |||| ||||| ||||||||||||||||||||    
T  32327231 ttacaaattcaagcaatgattttgacgttaacgttgcagatccggaagcatgagtagtttggtgatttagg-ttttatcatattatttgtag 32327141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 127641 - 127835
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||| ||||| ||||||||||||||||||| | | ||| ||||||||| |||||||||||||  |||||||||||||| |||||| ||||||    
T  127641 tcgtctaagtgcagcgttgtgttgttcgtcgtcttgtgtgacatttgatttcgcgt-ttgtcgcggtgttcatttagttcctattgaaagatcgacatca 127739  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| ||||||| | |||| ||||||||| ||||||||||||| | |||||||||  ||||| |||| ||| | ||||||||||||||||||||    
T  127740 gtcaattacaaattcgatcaatgatttgggcgtcaacgttgcagattcggaagcatgagtatttcggtgattta-gattttatcatattatttgtag 127835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 28 - 199
Target Start/End: Original strand, 30894595 - 30894765
Alignment:
Q  28 ttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaatta 126  Q
    ||||||||||| |||| ||||| ||||||||||||| ||||||||| ||||||||| ||||| |||||| ||||||||||||| |||||||||||||| |    
T  30894595 ttcgtcgtcttttgcgacgtttgatttcgcgtcttgccgcggtgttcgtttagttcatattgaaagatcgacatcagtcaattacaaattcaaccaatga 30894694  T
Q  127 tttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    |||||||| ||||||| ||||||||||||||||   |||||  ||| ||||| ||||||||||||||||||||    
T  30894695 tttgggcgtcaacgttacagatccagaagcatg-gtatttcgatgaattagg-ttttatcatattatttgtag 30894765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 43 - 199
Target Start/End: Original strand, 12170479 - 12170634
Alignment:
Q  43 gcgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgtt 142  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||| ||||||||| |||| ||||||  | |||||||    
T  12170479 gcgtttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgtt 12170578  T
Q  143 gcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    |||||||| ||||||||   ||||| |||| ||||| ||| ||||||||||||||||    
T  12170579 gcagatccggaagcatgggtatttcggtgatttagg-tttgatcatattatttgtag 12170634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 3355085 - 3355287
Alignment:
Q  1 tcatcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctaca 99  Q
    ||||||| ||||||||| ||| ||||||||||| ||||||| | ||||| |||||||||||||| | |||||| ||||||||||||||| ||| || |||    
T  3355085 tcatcgtctaagtgcggtgttgtgttgttcgtcctcttgtgtgacgtttgatttcgcgtcttgttgtggtgttcgtttagttcctattgaaaggtcgaca 3355184  T
Q  100 tcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||||||  ||||||||  ||| |||||| || |||| |||||||||| |||||||||  |||||||||||||| | ||||||| |||| |||| ||    
T  3355185 tcagtcaattataaattcaatgaatgatttggacgtcaactttgcagatccggaagcatgagtatttcagtgactta-gattttatcctattgtttggag 3355283  T
Q  200 acat 203  Q
    ||||    
T  3355284 acat 3355287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 199
Target Start/End: Complemental strand, 29255551 - 29255370
Alignment:
Q  17 gcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaat 115  Q
    ||||| ||||||||||||||||||||  ||||| |||| | ||||| |||||||||| ||||||||||||||| ||||||| |||||||||||| |||||    
T  29255551 gcgttgtgttgttcgtcgtcttgtgcaacgtttgattt-gtgtcttatcgcggtgttcgtttagttcctattgaaagatcttcatcagtcaattacaaat 29255453  T
Q  116 tcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    |||| |||| ||||||||| ||||||| ||||||| ||| ||||   ||||| |||||||| | ||||||||||||||||||||    
T  29255452 tcaatcaatgatttgggcgtcaacgttacagatccggaaacatgggtatttcggtgactta-gattttatcatattatttgtag 29255370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 18 - 199
Target Start/End: Complemental strand, 30608619 - 30608439
Alignment:
Q  18 cgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaatt 116  Q
    |||| ||||||||||||||||||||| ||||| |||| |||| ||||||| |||||  |||||||||||||| |||||| |||| |||||||| ||||||    
T  30608619 cgttgtgttgttcgtcgtcttgtgcggcgtttgattttgcgt-ttgtcgctgtgttcatttagttcctattgaaagatcgacataagtcaattacaaatt 30608521  T
Q  117 caaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    |||||||| ||||||| | ||||||||||||||  ||| ||||   ||||| ||||||||   ||||||||||||||||||||    
T  30608520 caaccaatgatttgggtgtcaacgttgcagatctggaatcatgggtatttcggtgactta-tattttatcatattatttgtag 30608439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 4 - 195
Target Start/End: Complemental strand, 68120 - 67929
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| |||||| || ||| |||| |||  ||||||||||| ||||| ||||||||| |||||| |||||||||| |||||||| || |||||||||||||    
T  68120 tcgtctaagtgtggtgttgtgttattcaccgtcttgtgcggcgtttgatttcgcgttttgtcgtggtgtttgttcagttcctaatgaaagatctacatca 68021  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattattt 195  Q
    ||||||| |||||||||||||  |||||  ||  |||||||||||||| ||| ||||   ||||| | |||||| | ||||||||||||||||    
T  68020 gtcaattacaaattcaaccaacgatttgtacgttaacgttgcagatccggaaacatgggtatttcggcgacttaag-ttttatcatattattt 67929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 44 - 130
Target Start/End: Complemental strand, 11321547 - 11321461
Alignment:
Q  44 cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttg 130  Q
    ||||| ||||| |||||||| | |||||| ||||||||||||||| |||||| ||||||||||||| ||||||||| ||||||||||    
T  11321547 cgtttgatttcacgtcttgttgtggtgttcgtttagttcctattgaaagatcgacatcagtcaattacaaattcaatcaattatttg 11321461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 26588597 - 26588392
Alignment:
Q  1 tcatcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcgc----gtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatct 96  Q
    ||||||||| ||||||| ||| ||||| | |||||||||||||     |||| ||||| |||||||| |||||||| |||| |||| ||||| ||||||     
T  26588597 tcatcgtttgagtgcggagttgtgttgattgtcgtcttgtgcggcgttgtttgatttcccgtcttgttgcggtgttcgtttggttcatattgaaagatca 26588498  T
Q  97 acatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 196  Q
    || |||||||||  || ||||||  ||| ||||||  | |||||||||| ||||||||||||||  ||||  |||| ||  | ||||||||||||||||     
T  26588497 acttcagtcaatcacacattcaattaatgatttggatgtcaacgttgcaaatccagaagcatgagtatttgggtga-ttttgattttatcatattatttt 26588399  T
Q  197 tagacat 203  Q
    |||||||    
T  26588398 tagacat 26588392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 195
Target Start/End: Complemental strand, 4010611 - 4010440
Alignment:
Q  23 tgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaacc 121  Q
    ||||||||||||||||||||  | ||| |||| ||||| ||| ||| |||||||||  ||||||||| |||||| | |||| |||||| || |||||| |    
T  4010611 tgttgttcgtcgtcttgtgcatcatttgattttgcgtcatgttgcgatgtttgtttgattcctattgaaagatc-atatcaatcaattacatattcaatc 4010513  T
Q  122 aattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattattt 195  Q
    ||| ||||||| |   ||||||||||||| |||||||||  ||||| |||||||| |  |||||||||||||||    
T  4010512 aatgatttgggtgttgacgttgcagatccggaagcatgagtatttcggtgactta-gaatttatcatattattt 4010440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 199
Target Start/End: Original strand, 8102759 - 8102892
Alignment:
Q  65 gcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaat 164  Q
    ||||||||||||| |||| ||||| ||||||  | |||| ||||  ||||||||  |||| ||||||||| ||||||||||||||||||| |||||| ||    
T  8102759 gcggtgtttgtttggttcgtattgaaagatcagcttcagacaatcacaaattcattcaatgatttgggcgtcaacgttgcagatccagaaacatgaatat 8102858  T
Q  165 ttcagtgacttaggcttttatcatattatttgtag 199  Q
    |    ||| ||| | ||||||||||||||||||||    
T  8102859 tctgatgattta-gattttatcatattatttgtag 8102892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 20220856 - 20220906
Alignment:
Q  11 agtgcggcgttttgttgttcgtcgtcttgtgc-gcgtttaatttcgcgtct 60  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  20220856 agtgcggcgttttgttgttcgtcgtcttgtgcggcgtttgatttcgcgtct 20220906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 22114840 - 22114890
Alignment:
Q  11 agtgcggcgttttgttgttcgtcgtcttgtgc-gcgtttaatttcgcgtct 60  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  22114840 agtgcggcgttttgttgttcgtcgtcttgtgcggcgtttgatttcgcgtct 22114890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 176
Target Start/End: Complemental strand, 24227851 - 24227678
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtg-cgcgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    ||||||||||||| |||| ||||||| || || |||||  |||||| ||||| |||||| || |||||||  |||| ||| ||||| || ||| || |||    
T  24227851 tcgtttaagtgcgacgttgtgttgtttgttgtgttgtgtggcgtttgatttcacgtcttatcacggtgttcatttaattcatattgaaatatcgacttca 24227752  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgactta 176  Q
    ||||||| ||| ||||| |||| |||||  |  ||||||| ||||||| |||||||  | |||| |||||||||    
T  24227751 gtcaattacaatttcaatcaatgatttgaacctcaacgttccagatcctgaagcatacatattttagtgactta 24227678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 159
Target Start/End: Original strand, 546111 - 546158
Alignment:
Q  112 aaattcaaccaattatttgggcggcaacgttgcagatccagaagcatg 159  Q
    |||||||| |||| ||||||||| ||||||||||||||||||||||||    
T  546111 aaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcatg 546158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 57 - 199
Target Start/End: Complemental strand, 528415 - 528274
Alignment:
Q  57 gtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagc 156  Q
    ||||||| || |||||||||| |||| ||| | ||||||  | ||||| |||| || ||| || |||||||||||||| ||||||||||||| | ||||     
T  528415 gtcttgttgcagtgtttgtttcgttcttatcgaaagatcagcttcagtaaattacatatttaatcaattatttgggcgtcaacgttgcagattctgaagt 528316  T
Q  157 atgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    || |  |||  ||||| ||| | ||||||||||||||||||||    
T  528315 ataagtattctagtgattta-gattttatcatattatttgtag 528274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 155
Target Start/End: Original strand, 14801906 - 14801950
Alignment:
Q  111 caaattcaaccaattatttgggcggcaacgttgcagatccagaag 155  Q
    ||||||||| |||| ||||||||| ||||||||||||||||||||    
T  14801906 caaattcaatcaatgatttgggcgtcaacgttgcagatccagaag 14801950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 199
Target Start/End: Original strand, 20225902 - 20226017
Alignment:
Q  83 ctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttt 182  Q
    ||||||||||||| || ||| ||| || ||||||||| |||| |||| |||| | ||||||||||| | |||||||||  |||||  ||| ||| |  ||    
T  20225902 ctattggaagatcaacttcattcagttacaaattcaatcaatgattttggcgccgacgttgcagattctgaagcatgagtatttcgatgagtta-gaatt 20226000  T
Q  183 tatcatattatttgtag 199  Q
    |||||||||||||||||    
T  20226001 tatcatattatttgtag 20226017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 199
Target Start/End: Original strand, 22119886 - 22120001
Alignment:
Q  83 ctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttt 182  Q
    ||||||||||||| || ||| ||| || ||||||||| |||| |||| |||| | ||||||||||| | |||||||||  |||||  ||| ||| |  ||    
T  22119886 ctattggaagatcaacttcattcagttacaaattcaatcaatgattttggcgccgacgttgcagattctgaagcatgagtatttcgatgagtta-gaatt 22119984  T
Q  183 tatcatattatttgtag 199  Q
    |||||||||||||||||    
T  22119985 tatcatattatttgtag 22120001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 13546782 - 13546722
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgc-gcgtttaatttcgcgtcttgt 63  Q
    |||||| ||||||||||| |||||||||||||||| ||| |||||| |||| ||| |||||    
T  13546782 tcgtttgagtgcggcgttgtgttgttcgtcgtcttatgcggcgtttgattttgcgccttgt 13546722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 117; Significance: 8e-60; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 37876726 - 37876531
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37876726 tcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcatttgatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 37876627  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| |||||||||||||| | ||||||  |||||||||||||||  |||||||   ||||| ||||||||   ||||||||||||||||||||    
T  37876626 gtcaattacaaattcaaccaatgacttgggcatcaacgttgcagatccgaaagcatgggtatttcggtgactta-aattttatcatattatttgtag 37876531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 10 - 196
Target Start/End: Complemental strand, 5427982 - 5427797
Alignment:
Q  10 aagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaat 108  Q
    |||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  5427982 aagtgcggcgttttgttgttcgtcgtcttgtgtggcgtttgatttcgcgtcttgtcgcggtgtttgtttagttcatattggaagatctacatcagtcaa- 5427884  T
Q  109 tgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 196  Q
    | |||||||||||||| | ||| ||| ||||||||||||||| |||| |||   |||||||||||||||| |||||||||||||||||    
T  5427883 tacaaattcaaccaatgacttgtgcgtcaacgttgcagatccggaagtatgtgtatttcagtgacttagg-ttttatcatattatttg 5427797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 18763445 - 18763643
Alignment:
Q  1 tcatcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctaca 99  Q
    ||||||| ||||||||| ||| ||||||||||||||||||||| ||||| |||||||||||| || ||||||| ||||||||||||||| ||||||  ||    
T  18763445 tcatcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttatcacggtgttcgtttagttcctattgaaagatcggca 18763544  T
Q  100 tcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||| |||||| |||||||||||||| ||||||||| ||||||| ||||||| ||||||||  |||||| |||||||||| ||||||||||||||||||||    
T  18763545 tcaatcaattacaaattcaaccaatcatttgggcgtcaacgttacagatccggaagcatgtgaatttcggtgacttagg-ttttatcatattatttgtag 18763643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 9 - 198
Target Start/End: Original strand, 7448232 - 7448421
Alignment:
Q  9 taagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaa 107  Q
    ||||||||||||| ||||||||||||||||||||| ||||| ||||||||| |||||||| |||||||| ||| ||| ||| ||||||||||||||||||    
T  7448232 taagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcgcgatgtttgttcagtgcctcttgaaagatctacatcagtcaa 7448331  T
Q  108 ttgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgta 198  Q
    || || ||||||||||| |||||| || ||||||||||||||| |||||||||  |||||||||||||| | |||||||||||||||||||    
T  7448332 ttacatattcaaccaataatttggacgtcaacgttgcagatccggaagcatgagtatttcagtgacttaag-ttttatcatattatttgta 7448421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 1415537 - 1415732
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||| || |||| |||||||| |||||||||||| ||||| ||||||||| ||||||||||||||||||| ||||||||| ||||||  |||||    
T  1415537 tcgtctaagtacgacgttgtgttgttcttcgtcttgtgcggcgtttgatttcgcgttttgtcgcggtgtttgtttatttcctattgaaagatcggcatca 1415636  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| |||||||||||||| ||||||||| |||||||| |||||| ||||||||  |||||| |||||||||| |||||||| |||||||||||    
T  1415637 gtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccggaagcatgtgaatttcggtgacttagg-ttttatcagattatttgtag 1415732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 1421656 - 1421851
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgc-gcgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||| ||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||||  |||| |||||| |||||||||||||    
T  1421656 tcgtctaagtgcggtgttatgttgttcgtcgtcttgtgcagcgtttgatttcgcgtcttgtcgcggtgtttgtccagtttctattgaaagatctacatca 1421755  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
     |||||| ||||||||| |||| |||||| || ||||||||||||||| ||||||||   ||||| |||| ||||| ||||||||||||||||||||    
T  1421756 atcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgatttagg-ttttatcatattatttgtag 1421851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 4778733 - 4778928
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgc-gcgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||||||||||||||||| |||| ||||||||||||||| |||||| ||||||||| || ||||||||||| || | ||||| ||| |||||||||||||    
T  4778733 tcgtttaagtgcggcgttgtgttattcgtcgtcttgtgcagcgtttgatttcgcgttttctcgcggtgtttattcaattcctcttgaaagatctacatca 4778832  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| |||||||||||||| |||||| || ||||||||||||||| ||||||||   ||||| |||||||| | ||||||||||||||||||||    
T  4778833 gtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaag-ttttatcatattatttgtag 4778928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 36943241 - 36943046
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||| |||| ||||||||||| |    
T  36943241 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtattgtcgcggtgtttgtttagttccaattgaaagatctacatta 36943142  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||| ||| ||||||| |||||| ||||||||| ||||||||||||||| ||| ||||   ||||| ||||||| |  ||||||||||||||||||||    
T  36943141 gtcgattacaaattccaccaatgatttgggcgtcaacgttgcagatccggaaacatgggtatttcggtgactt-gaattttatcatattatttgtag 36943046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 38445146 - 38445341
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||| ||||| ||||||||||||||||||||| ||||| ||||||||| || |||||||||||||| ||||||||||| |||||||||||||    
T  38445146 tcgtctaagtgcagcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttatcgcggtgtttgttcagttcctattgaaagatctacatca 38445245  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    || |||| |||||||||||||| |||||| || ||||||||||||||| ||||| ||   ||||| |||||||| | ||||||||||||||||||||    
T  38445246 gtaaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcgtgggtatttcggtgacttaag-ttttatcatattatttgtag 38445341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 23 - 196
Target Start/End: Original strand, 33923704 - 33923877
Alignment:
Q  23 tgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaacc 121  Q
    ||||||||||||||||||||| ||||| ||||||||| || ||| |||||||||||| ||||||||| |||||| ||||||||||||| |||||||||||    
T  33923704 tgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttatcgtggtgtttgtttatttcctattgaaagatcgacatcagtcaattacaaattcaacc 33923803  T
Q  122 aattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 196  Q
    ||| ||||||||| |||||||| |||||| ||||||||  |||||| |||||||||| |||||||||||||||||    
T  33923804 aatgatttgggcgtcaacgttgaagatccggaagcatgtgaatttcggtgacttagg-ttttatcatattatttg 33923877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 31788437 - 31788631
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| |||||||| ||||||||||||||| |||||||||| ||||| |||| || ||||||||||||||||||| ||||||||||| |||||||| ||||    
T  31788437 tcgtctaagtgcgacgttttgttgttcgttgtcttgtgcggcgtttgattt-gcatcttgtcgcggtgtttgttcagttcctattgaaagatctatatca 31788535  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
     |||||| ||||||||| |||| |||||| || |||||||||||||||  ||||||||  |||||||||||||||| ||||| ||||||||||||||    
T  31788536 atcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccgaaagcatgagtatttcagtgacttagg-ttttaacatattatttgtag 31788631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 10 - 203
Target Start/End: Complemental strand, 4904259 - 4904066
Alignment:
Q  10 aagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaat 108  Q
    ||||| |||||| ||||||||||||||||||||| ||||| |||| | ||||||| |||||||| |||| |||| ||||| |||||| ||||||||||||    
T  4904259 aagtgtggcgttgtgttgttcgtcgtcttgtgcgacgtttgattttgtgtcttgttgcggtgttcgtttggttcatattgaaagatcgacatcagtcaat 4904160  T
Q  109 tgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacat 203  Q
    | ||||||||||  || ||||||| | |||||||||||||||||||||||| | ||||| |||||||| | ||||||||||||||||||||||||    
T  4904159 tacaaattcaactgatgatttgggtgtcaacgttgcagatccagaagcatggatatttcggtgactta-gattttatcatattatttgtagacat 4904066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 4 - 195
Target Start/End: Complemental strand, 7677993 - 7677802
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||||||||| || ||||||||||| ||||||||||| |||||||||||||    
T  7677993 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttatctcggtgtttgttcagttcctattgaaagatctacatca 7677894  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattattt 195  Q
     |||||| ||||||||| |||| |||||| |  |||||||||||||||  |||||||   ||||| |||| ||||| ||||||||||||||||    
T  7677893 atcaattacaaattcaagcaatgatttggacatcaacgttgcagatccgaaagcatgggtatttccgtgaattagg-ttttatcatattattt 7677802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 27097526 - 27097332
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| ||||||||||||||||||||| | ||| ||||| | | ||||||||||||||||| ||||||| ||| |||||||||||||    
T  27097526 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcatttgatttcaccttttgtcgcggtgtttgttcagttcctcttgaaagatctacatca 27097427  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| |||||||||||||| |||||| || ||||||||||||||  ||||||||   ||||| |||||||| | ||||||||||||||||||||    
T  27097426 gtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatctggaagcatg-gtatttcggtgacttaag-ttttatcatattatttgtag 27097332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 7 - 199
Target Start/End: Complemental strand, 31128897 - 31128705
Alignment:
Q  7 tttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtc 105  Q
    ||||| ||||||||| ||||||| ||||||||||| | ||||| ||| ||| ||||||||||||||| ||||||||||||||| || ||| | |||||||    
T  31128897 tttaattgcggcgttgtgttgttagtcgtcttgtgtggcgtttgattccgcttcttgtcgcggtgttcgtttagttcctattgaaaaatcgatatcagtc 31128798  T
Q  106 aattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    |||| ||||||||| |||| |||| |||| ||||||||||||||| |||||||||  ||||||||||||||   ||||||||||||||||||||    
T  31128797 aattacaaattcaatcaatgatttaggcgtcaacgttgcagatccggaagcatgagtatttcagtgactta-tattttatcatattatttgtag 31128705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 31210727 - 31210532
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| ||||||| || |||||||||| ||||| |||||||||||| ||| |||||||||| ||||||||||| |||||||||||||    
T  31210727 tcgtctaagtgcggcgttgtgttgtttgttgtcttgtgcggcgtttgatttcgcgtcttatcgtggtgtttgttcagttcctattgaaagatctacatca 31210628  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
     |||||| ||||||||| |||| |||||| || ||||||||||||||   |||||||   ||||| |||| ||||| ||||||||||||||||||||    
T  31210627 atcaattacaaattcaagcaatgatttggacgtcaacgttgcagatcagaaagcatgggtatttcggtgatttagg-ttttatcatattatttgtag 31210532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 7646453 - 7646653
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||||| |||||| |||||||||| | ||| | ||| |||||||||||||    
T  7646453 tcgtctaagtgcggcgttatgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcgtggtgtttgttcaattctttttgaaagatctacatca 7646552  T
Q  103 gtcaattgcaaattcaaccaa-----ttatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgt 197  Q
    ||||||| ||||||||| |||     | |||||| || ||||||||||||||| |||||||||  ||||| |||||||| | ||||||||||||||||||    
T  7646553 gtcaattacaaattcaatcaatgatttaatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaag-ttttatcatattatttgt 7646651  T
Q  198 ag 199  Q
    ||    
T  7646652 ag 7646653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 4 - 198
Target Start/End: Complemental strand, 43397239 - 43397044
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| |||||| |||||| ||||||||||||||||||| | ||||| ||||||||||||||||||||||| ||||| ||| ||||| ||||||  ||| |    
T  43397239 tcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgtggcgtttgatttcgcgtcttgtcgcggtgttcgtttatttcatattgaaagatcggcatta 43397140  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacg-ttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgta 198  Q
    | ||| | | |||||||||||| ||||||||| ||||| ||| |||||| ||||||||  ||||||||||||||||| |||||||||||||||||||    
T  43397139 gccaactacgaattcaaccaatgatttgggcgtcaacgtttgaagatccggaagcatgtgaatttcagtgacttagg-ttttatcatattatttgta 43397044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 23 - 193
Target Start/End: Original strand, 8809279 - 8809449
Alignment:
Q  23 tgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaacc 121  Q
    ||||||| ||||||||||||| |  || ||||||||||||||||||||||| |  |||||||||||| |||||| ||||||||||||| ||| ||||| |    
T  8809279 tgttgttagtcgtcttgtgcggcaattgatttcgcgtcttgtcgcggtgttcgcatagttcctattgaaagatcgacatcagtcaattacaagttcaatc 8809378  T
Q  122 aattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattat 193  Q
    ||| ||||||||| |||| |||||||||| ||||||||| ||||||||||||||| | ||||||||||||||    
T  8809379 aatgatttgggcgccaacattgcagatccggaagcatgagaatttcagtgactta-gattttatcatattat 8809449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 11985350 - 11985158
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| |||||||||| || ||||||| || |||||||||| ||||| |||| ||||||||||||||||||  |||||||||||||| |||| | |||       
T  11985350 tcgtctaagtgcggctttgtgttgtttgttgtcttgtgcggcgtttgattttgcgtcttgtcgcggtgttcatttagttcctattgaaagagcgaca--- 11985254  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| |||| ||||||||| |||| || | |||||||||||||||||||| ||||  |||||||||||||||| ||||||||||||||||||||    
T  11985253 gtcaattacaaactcaaccaatgatttaggtgtcaacgttgcagatccagaagaatgagtatttcagtgacttagg-ttttatcatattatttgtag 11985158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 9169378 - 9169183
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| |||||||||| |||||||||| ||||| ||||| ||| ||| |||| ||||||||  |||||| ||| |||||||||||||    
T  9169378 tcgtctaagtgcggcgttgtgttgttcgttgtcttgtgcgtcgtttgatttcacgttttgccgcgatgtttgttcggttcctcttgaaagatctacatca 9169279  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    || |||| |||||||||| ||| |||||| || ||||||||||||||| ||||||||   ||||| |||||||| | | ||||||||||||||||||    
T  9169278 gtgaattacaaattcaacgaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaag-tcttatcatattatttgtag 9169183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 36691854 - 36692049
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| |||||||||||||||||||||| |||| | ||||| ||||| ||||||| ||||||||||||||| |||||||| ||| || |||||  |||||     
T  36691854 tcgtctaagtgcggcgttttgttgttcatcgtttagtgcgacgtttgatttcgcatcttgtcgcggtgttcgtttagtttctactgaaagattgacatcg 36691953  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| ||||||||| |||| |||||| || |||| ||||||||||  |||||||  |||||| |||| ||||| ||||||||||||||||||||    
T  36691954 gtcaattacaaattcaagcaatgatttggacgtcaacattgcagatcctaaagcatgtgaatttcggtgatttagg-ttttatcatattatttgtag 36692049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 4041709 - 4041519
Alignment:
Q  9 taagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaa 107  Q
    |||||||| |||| |||||||||||||||||| || ||||| |||| || |||||||  ||||||||||  |||||||||| ||||| ||||| ||||||    
T  4041709 taagtgcgtcgttgtgttgttcgtcgtcttgtacggcgtttgattttgcatcttgtcatggtgtttgttcggttcctattgaaagatttacattagtcaa 4041610  T
Q  108 ttgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| ||||||||| |||||| || |||||||||||||||  ||||||||  |||||  | |||||||| |||||||||||||||||||    
T  4041609 ttgcaaactcaaccaatgatttggacgtcaacgttgcagatccgaaagcatgagtatttcgataacttaggc-tttatcatattatttgtag 4041519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 19029034 - 19028839
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||| ||||||| |||| ||||||||| |||||| | ||| ||||||||||||||| |||||||  |||||||||||||| |||||| || |||    
T  19029034 tcgtctaagttcggcgttgtgttattcgtcgtcatgtgcggcatttgatttcgcgtcttgtctcggtgttcatttagttcctattgaaagatcgacttca 19028935  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||| | ||||||||| |||| ||||| ||| |||||||||| ||||||||||||| | ||||| || ||||| | |||||||||| |||||||||    
T  19028934 gtcaagtacaaattcaatcaatgatttgagcgtcaacgttgcaaatccagaagcatggatatttcggtaactta-gattttatcatactatttgtag 19028839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 4 - 195
Target Start/End: Complemental strand, 19062472 - 19062281
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||| ||||| ||||||||||||||||||||| | ||| ||||| ||||||||| | ||||||||| | ||||| ||| |||||||||||||    
T  19062472 tcgtctaagtgcagcgttgtgttgttcgtcgtcttgtgcggcatttgatttcacgtcttgtcacagtgtttgttcaattcctgttgaaagatctacatca 19062373  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattattt 195  Q
    ||||||| ||||||||| |||| |||||| || ||||||| |||||||  |||||||   ||||| |||||||| | ||||||||||||||||    
T  19062372 gtcaattacaaattcaatcaatgatttggacgtcaacgtttcagatccgaaagcatgggtatttcggtgacttaag-ttttatcatattattt 19062281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 43 - 198
Target Start/End: Complemental strand, 33585815 - 33585661
Alignment:
Q  43 gcgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgtt 142  Q
    |||||| ||| ||||||||||||||||||||||| ||||||||||| || |||||| ||| |||||| ||||||||| |||| |||||| || |||||||    
T  33585815 gcgtttgattacgcgtcttgtcgcggtgtttgttcagttcctattgaaaaatctacctcaatcaattacaaattcaagcaatgatttggacgtcaacgtt 33585716  T
Q  143 gcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgta 198  Q
    |||||||| |||||||||  | ||| |||| ||| | |||||||||||||||||||    
T  33585715 gcagatccggaagcatgagtaattcggtgatttaag-ttttatcatattatttgta 33585661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 39310967 - 39310778
Alignment:
Q  9 taagtgcggcgttttgttgttcgtcgtcttgtgc-gcgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaa 107  Q
    |||||| || ||| |||||||| ||||||||||| |||||| |||||||| ||| ||||||| ||||||||||||||||| ||||||| || ||||||||    
T  39310967 taagtgtggtgttgtgttgttcttcgtcttgtgcagcgtttgatttcgcgccttatcgcggtatttgtttagttcctatttgaagatcgacttcagtcaa 39310868  T
Q  108 ttgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    || ||||||||| || | ||||||||  |||| ||||| |||| || |||||   |||||||||||||| | ||||||||||||||||||||    
T  39310867 ttacaaattcaatcattgatttgggcatcaacattgcacatcc-gaggcatgggtatttcagtgactta-gattttatcatattatttgtag 39310778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 4 - 149
Target Start/End: Original strand, 35220305 - 35220451
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| |||||||||| || |||||||| |||||||||||| ||||| |||| |||| ||||| |||||||  |||||||||||||| |||||| ||||||    
T  35220305 tcgtctaagtgcggcattatgttgttcatcgtcttgtgcggcgtttgattttgcgttttgtcacggtgttcatttagttcctattgaaagatcaacatca 35220404  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatc 149  Q
    ||| ||| |||||||||||||| ||||||||| |||| |||||||||    
T  35220405 gtccattacaaattcaaccaatgatttgggcgtcaactttgcagatc 35220451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 4 - 160
Target Start/End: Complemental strand, 30400155 - 30399998
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| |||||||| | || |||||||| |||||||||||| | ||| |||| || || |||||||||||| ||||||||||||||| |||||| || |||    
T  30400155 tcgtctaagtgcgacattgtgttgttcttcgtcttgtgcggcatttgattttgcatcgtgtcgcggtgttcgtttagttcctattgaaagatcaacttca 30400056  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatga 160  Q
    ||||||| ||||||||| |||| ||||||||| |||||||||||||||  ||||||||    
T  30400055 gtcaattacaaattcaatcaatgatttgggcgtcaacgttgcagatccgaaagcatga 30399998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 17 - 199
Target Start/End: Complemental strand, 25509175 - 25508993
Alignment:
Q  17 gcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaat 115  Q
    ||||| |||||||  |||||||||||| ||||| |||| | |||||||||||||||| |||||||||| |||| |||||| ||||||||||||| |||||    
T  25509175 gcgttgtgttgttattcgtcttgtgcgacgtttgattttgtgtcttgtcgcggtgttcgtttagttcccattgaaagatcaacatcagtcaattacaaat 25509076  T
Q  116 tcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    |||| |||| || |||||| |||||||||| |||| ||| ||||   |||||  ||||||| | ||||||| ||||||||||||    
T  25509075 tcaatcaatgatctgggcgtcaacgttgcaaatccggaaacatgggtatttcgatgactta-gattttatcgtattatttgtag 25508993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 43 - 174
Target Start/End: Complemental strand, 28871868 - 28871737
Alignment:
Q  43 gcgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgtt 142  Q
    |||||| ||||||||||||||||||||||| |||| |||||||||| |||||| || |||||||||| || ||||||||||| |||| |||| | |||||    
T  28871868 gcgtttgatttcgcgtcttgtcgcggtgttcgtttggttcctattgaaagatcaacttcagtcaattacagattcaaccaatgatttaggcgtcgacgtt 28871769  T
Q  143 gcagatccagaagcatgaaaatttcagtgact 174  Q
    |||||| ||||| |||| | |||| |||||||    
T  28871768 gcagattcagaatcatgtatattttagtgact 28871737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 42698814 - 42698674
Alignment:
Q  11 agtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaatt 109  Q
    |||||| |||| ||||||||||||||||||| | ||||| |||| ||||||||||||  ||||||||||||| |||||| |||||| |||||||| ||||    
T  42698814 agtgcgacgttgtgttgttcgtcgtcttgtgtggcgtttgattttgcgtcttgtcgcaatgtttgtttagtttctattgaaagatcgacatcagtgaatt 42698715  T
Q  110 gcaaattcaaccaattatttgggcggcaacgttgcagatcc 150  Q
     ||||||||| || | |||||| || || ||||||||||||    
T  42698714 acaaattcaatcagtgatttggacgtcagcgttgcagatcc 42698674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 4 - 194
Target Start/End: Complemental strand, 29173839 - 29173650
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgc-gcgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| |||||||| ||||||| |   || | | |||| ||||||| |||| ||||| ||||||||||||||| ||| || ||||||    
T  29173839 tcgtctaagtgcggcgttgtgttgttcatcgtcttatattgcatgtgattttgcgtcttatcgcagtgttcgtttagttcctattgaaagctcgacatca 29173740  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatt 194  Q
     |||||| ||||||||| |||||||||||| | |||||||||||||||  |||||||   ||||| |||||||| | |||||||||||||||    
T  29173739 -tcaattacaaattcaatcaattatttgggtgtcaacgttgcagatccgaaagcatgggtatttcggtgactta-gattttatcatattatt 29173650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 29279690 - 29279495
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||| ||||||||| ||||| | ||||||||| ||| | ||| |||||| ||||||||||||| || ||||||||||  ||| | |||| ||||||    
T  29279690 tcgtctaattgcggcgttgtgttggtagtcgtcttgggcgacatttgatttcgtgtcttgtcgcggtattagtttagttcccgttgaatgatcaacatca 29279591  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||| ||| ||||||||| |||| ||||| ||| ||| ||||||||||| ||| |||||   |||| ||||||||   ||||||||||||||||||||    
T  29279590 gtcgattacaaattcaatcaatgatttgtgcgtcaatgttgcagatccggaaacatgagtttttcggtgactta-aattttatcatattatttgtag 29279495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 4099083 - 4099180
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacat 100  Q
    |||| ||||||||||||| |||||||||| |||||||||| ||||| |||| |||| |||||| |||||||||| ||||||||||| |||||||||||    
T  4099083 tcgtctaagtgcggcgttgtgttgttcgttgtcttgtgcggcgtttgattttgcgttttgtcgtggtgtttgttcagttcctattgaaagatctacat 4099180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 12677490 - 12677380
Alignment:
Q  83 ctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttt 182  Q
    |||||| ||||||  ||| |||||||| |||||||||||||| ||||||||| |||||||| |||||| ||||||||  |||||  |||||||||| |||    
T  12677490 ctattgaaagatcggcataagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccggaagcatgtgaattttggtgacttagg-ttt 12677392  T
Q  183 tatcatattatt 194  Q
    ||||||||||||    
T  12677391 tatcatattatt 12677380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 4 - 157
Target Start/End: Complemental strand, 32448741 - 32448585
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcgc----gtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctaca 99  Q
    |||| |||||||| | || ||||||||||||||||||||||    |||| |||| || |||||| |||||||| |||  |||| ||||| ||||||  |     
T  32448741 tcgtctaagtgcgaccttgtgttgttcgtcgtcttgtgcgccgttgtttgatttggcatcttgttgcggtgttcgttg-gttcatattgaaagatcagct 32448643  T
Q  100 tcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagca 157  Q
    |||||||||  || |||||| |||| |||||| || ||||||||||||||||||||||    
T  32448642 tcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagca 32448585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 151
Target Start/End: Original strand, 41327525 - 41327631
Alignment:
Q  45 gtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgc 144  Q
    |||| ||||| ||| |||| |||||||| |||| ||| |||||| ||||||||  |||||||||| |||||||||||||| |||||| || |||| || |    
T  41327525 gtttgatttcacgtattgttgcggtgttcgtttggtttctattgaaagatctatttcagtcaattacaaattcaaccaatgatttggacgtcaacattac 41327624  T
Q  145 agatcca 151  Q
    |||||||    
T  41327625 agatcca 41327631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 195
Target Start/End: Original strand, 41694644 - 41694792
Alignment:
Q  45 gtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgc 144  Q
    |||||||||||| |||||| ||||||||| ||  |||||| ||| ||||||  | |||| ||||| || |||||| |||| ||||||||  |||||||||    
T  41694644 gtttaatttcgcctcttgttgcggtgtttcttg-gttcctgttgaaagatcagcttcagccaattacatattcaatcaatgatttgggcatcaacgttgc 41694742  T
Q  145 agatccagaagcatgaaaatttcagtgacttaggcttttatcatattattt 195  Q
    |||| |||||||||| | |||   |||||||| | ||||||||||||||||    
T  41694743 agatgcagaagcatgtagattctggtgactta-gattttatcatattattt 41694792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 12554294 - 12554106
Alignment:
Q  11 agtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaatt 109  Q
    ||||||||||| |||||| ||||  |||||||| | |||||||| | |||| || |||||||| ||||  ||| ||||| || ||| || ||||||||||    
T  12554294 agtgcggcgttgtgttgtccgtcaccttgtgcgacatttaattttgtgtctagttgcggtgttcgtttgattcatattgaaatatcaacttcagtcaatt 12554195  T
Q  110 gcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
     || |||||| |||| ||||||| |   || ||||| ||   |||||||||  |||||||| ||||||| ||||||||||||||||||||    
T  12554194 acagattcaatcaatgatttgggtgtggacattgcatatttggaagcatgagtatttcagtaacttagg-ttttatcatattatttgtag 12554106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 29574744 - 29574590
Alignment:
Q  11 agtgcggcgttttgttgttcgtcgtcttgtgcgc----gtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtca 106  Q
    ||||||||||| |||||||||||||||||||||     |||| ||||| | | |||| || ||||||||||  ||| ||||| |||||   | |||||||    
T  29574744 agtgcggcgttgtgttgttcgtcgtcttgtgcggcattgtttgatttcacattttgttgcagtgtttgtttgattcatattgaaagattagcttcagtca 29574645  T
Q  107 attgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaa 161  Q
    ||  || |||||| |||| |||||| || ||||||||||||||| ||||||||||    
T  29574644 atcacagattcaatcaatgatttggacgccaacgttgcagatccggaagcatgaa 29574590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 145
Target Start/End: Complemental strand, 34128800 - 34128662
Alignment:
Q  11 agtgcggcgttttgttgttcgtcgtcttgtgcgc----gtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtca 106  Q
    ||||||| ||| |||||||||||||||||||||     |||| |||  ||||||||| | ||||||||||| |||||||||  |||||| || | ||||     
T  34128800 agtgcggtgttatgttgttcgtcgtcttgtgcgacgttgtttgattgtgcgtcttgttgtggtgtttgtttggttcctattaaaagatcgactttagtcg 34128701  T
Q  107 attgcaaattcaaccaattatttgggcggcaacgttgca 145  Q
    |||  |||||||| |||||||||||||| ||| ||||||    
T  34128700 attataaattcaatcaattatttgggcgtcaatgttgca 34128662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 203
Target Start/End: Complemental strand, 17249264 - 17249068
Alignment:
Q  9 taagtgcggcgttttgttgttcgtcgtcttgtgcgc----gtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagt 104  Q
    |||||||| | || |||||||||||||||||||||     |||| |||| || |||||| ||||||||||||  |||| ||||| ||||||    |||||    
T  17249264 taagtgcgaccttgtgttgttcgtcgtcttgtgcggcgtagttttatttggcatcttgttgcggtgtttgttg-gttcatattgaaagatcagtttcagt 17249166  T
Q  105 caattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacat 203  Q
    ||||  || |||||| |||| |||||| || |||||||||||||||| ||||| ||  |||   |||| ||| | || |||||||||||||||||||||    
T  17249165 caatcacagattcaatcaatgatttggacgtcaacgttgcagatccataagcaagagtattctggtgattta-gattatatcatattatttgtagacat 17249068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 159
Target Start/End: Complemental strand, 10237271 - 10237180
Alignment:
Q  68 gtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatg 159  Q
    ||||| |||| |||| ||||| ||||||  | |||| ||||  ||||||||| |||| |||||| || ||||||||||||||||||||||||    
T  10237271 gtgttcgtttggttcgtattgaaagatcagcttcagacaatcacaaattcaatcaatgatttggacgtcaacgttgcagatccagaagcatg 10237180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 65 - 159
Target Start/End: Original strand, 3308987 - 3309081
Alignment:
Q  65 gcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatg 159  Q
    |||||||| |||| |||  ||||| || ||| || |||| ||||  ||||||||| |||| |||||||||  |||||||||||||||||||||||    
T  3308987 gcggtgttcgtttggtttgtattgaaatatcaacttcagacaatcacaaattcaatcaatgatttgggcgttaacgttgcagatccagaagcatg 3309081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 4264472 - 4264558
Alignment:
Q  24 gttgttcgtcgtcttgtgcgc-gtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaatt 109  Q
    ||||||||||||||||||||  |||| |||||||||||| | ||||||||  ||| |||| ||||| |||||| || ||||||||||    
T  4264472 gttgttcgtcgtcttgtgcggtgtttgatttcgcgtcttattgcggtgttcatttggttcttattgaaagatcaacttcagtcaatt 4264558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 159
Target Start/End: Original strand, 10929648 - 10929801
Alignment:
Q  11 agtgcggcgttttgttgttcgtcgtcttgtgcg-cgtt----taatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtc 105  Q
    ||||||| ||| |||||||||||||||||| || ||||    | |||| ||||||||| |||||||| |||| |||| | ||| || |||  | ||||||    
T  10929648 agtgcggtgttgtgttgttcgtcgtcttgtacgacgttgttttgatttagcgtcttgttgcggtgttcgtttggttcatgttgaaaaatcagcttcagtc 10929747  T
Q  106 aattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatg 159  Q
    |||  || |||||| |||| |||||| |  ||||||||||||||| ||||||||    
T  10929748 aatcacagattcaatcaatgatttggacatcaacgttgcagatccggaagcatg 10929801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 150
Target Start/End: Original strand, 11833504 - 11833604
Alignment:
Q  50 atttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatc 149  Q
    ||||||||||||||||||||||| ||||||||| ||||   ||||| | || |||||||| ||| || || |||| || ||| |  ||||||||||||||    
T  11833504 atttcgcgtcttgtcgcggtgttcgtttagttcatattaagagatcgatataagtcaattacaagttaaatcaatgatctggacatcaacgttgcagatc 11833603  T
Q  150 c 150  Q
    |    
T  11833604 c 11833604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 158
Target Start/End: Original strand, 24461470 - 24461578
Alignment:
Q  50 atttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatc 149  Q
    |||| ||| ||||| |||||||| |||| |||| ||||| |||||| || ||||||||   || |||||| | || |||||| || ||||||||||||||    
T  24461470 attttgcgccttgttgcggtgttcgtttggttcatattgaaagatcaacttcagtcaaccacagattcaatcgatgatttggacgccaacgttgcagatc 24461569  T
Q  150 cagaagcat 158  Q
    | |||||||    
T  24461570 cggaagcat 24461578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 12648046 - 12648004
Alignment:
Q  1 tcatcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg 43  Q
    ||||||| ||||||||| ||| |||||||||||||||||||||    
T  12648046 tcatcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcg 12648004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 159
Target Start/End: Original strand, 14423367 - 14423461
Alignment:
Q  65 gcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatg 159  Q
    ||||||||||||| |||| ||||| |||||| || | |||||||| || ||| || |||| |||||| || |||||||||| ||| |||| ||||    
T  14423367 gcggtgtttgtttggttcttattgaaagatcgactttagtcaattacagatttaatcaatgatttggacgtcaacgttgcaaatctagaaacatg 14423461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 18107848 - 18107782
Alignment:
Q  23 tgttgttcgtcgtcttgtgc-gcgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattg 88  Q
    |||||||||||||||||||| |||||| |||||||||| ||  |||||||| |||| |||| |||||    
T  18107848 tgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcatgctgcggtgttcgtttggttcatattg 18107782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 159
Target Start/End: Complemental strand, 23933684 - 23933583
Alignment:
Q  58 tcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagca 157  Q
    |||||| |||||||| |||| |||| ||||| ||| || || |||||||||  || |||||| ||||||||||| || ||||||| || |||  ||||||    
T  23933684 tcttgttgcggtgttcgtttggttcttattgaaagttcaacttcagtcaatcacagattcaatcaattatttggacgtcaacgttacatatctggaagca 23933585  T
Q  158 tg 159  Q
    ||    
T  23933584 tg 23933583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 131
Target Start/End: Original strand, 4100417 - 4100453
Alignment:
Q  95 ctacatcagtcaattgcaaattcaaccaattatttgg 131  Q
    ||||||||||||||| |||||||||||||| ||||||    
T  4100417 ctacatcagtcaattacaaattcaaccaatgatttgg 4100453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 32866 - 32671
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||| ||||||||||| |||||||||||||    
T  32866 tcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttgtcgcggtatttgttcagttcctattgaaagatctacatca 32767  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
     |||||| ||||||||| |||| |||||| || ||||||||||||||  |||||||||  ||||| |||||||| | ||||||||||||||||||||    
T  32766 atcaattacaaattcaagcaatgatttggacgtcaacgttgcagatctggaagcatgagtatttcggtgactta-gattttatcatattatttgtag 32671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 2e-57; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 12 - 199
Target Start/End: Complemental strand, 21533920 - 21533733
Alignment:
Q  12 gtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattg 110  Q
    |||||||||| |||||||||||||||||| || |||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |     
T  21533920 gtgcggcgttgtgttgttcgtcgtcttgtacggcgtttggtttcgcgtcttgtcgcggtgtttgtttagttcctattgaaagatctacatcagtcgacta 21533821  T
Q  111 caaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    |||||||||||||| ||||||||| ||||||||||||||| ||||||||   ||||| |||||||||| ||||||||||||||||||||    
T  21533820 caaattcaaccaataatttgggcgtcaacgttgcagatccggaagcatgggtatttcggtgacttagg-ttttatcatattatttgtag 21533733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 4 - 198
Target Start/End: Complemental strand, 12050767 - 12050573
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| |||| |||||||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||||||||||| |||||||||     
T  12050767 tcgtctaagcgcggcgttttgttgttcgtcgtcttgtgcggcgtttgatttctcctcttgtcgcggtgtttgtttagttcctattggaatatctacatcg 12050668  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgta 198  Q
    ||||||| |||||||||||||| ||||||| | ||||||||||||||| ||| |||||  ||||| | |||||||| |||||||||||||||||||    
T  12050667 gtcaattacaaattcaaccaatgatttgggtgtcaacgttgcagatccggaaacatgagtatttcggggacttagg-ttttatcatattatttgta 12050573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 9998436 - 9998631
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  9998436 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcgcggtgtttgtttagttcctcttgaaagatctacatca 9998535  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| |||||||||||||| |||||  ||   ||||||||||||||||||||||   ||||| |||||||| | ||||||||||||||||||||    
T  9998536 gtcaattacaaattcaaccaatgatttgcacgatgacgttgcagatccagaagcatgggtatttcggtgacttaag-ttttatcatattatttgtag 9998631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 10233039 - 10233234
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||| ||||||| ||| |||||||||||||    
T  10233039 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcgcggtgtttgttcagttcctcttgaaagatctacatca 10233138  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| |||||||||||||| |||| | ||  |||||||||||||||||| |||||  ||||| |||||||| | ||||||||||||||||||||    
T  10233139 gtcaattacaaattcaaccaatgatttagacgataacgttgcagatccagaaacatgagtatttcggtgacttaag-ttttatcatattatttgtag 10233234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 10229450 - 10229640
Alignment:
Q  9 taagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaa 107  Q
    ||||||||||||| ||||||||||| ||||||||| ||||| ||||||||| ||||||||||||||||| ||||||| ||| ||||||||||||||||||    
T  10229450 taagtgcggcgttgtgttgttcgtcatcttgtgcggcgtttgatttcgcgttttgtcgcggtgtttgttcagttcctcttgaaagatctacatcagtcaa 10229549  T
Q  108 ttgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    || |||||||||||||| |||||| ||  ||||||||||||||| ||||||||  ||||| |||||||| | ||||||||||||||||||||    
T  10229550 ttacaaattcaaccaatgatttggacgataacgttgcagatccaaaagcatgattatttcggtgacttaag-ttttatcatattatttgtag 10229640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 10108205 - 10108400
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| | ||||||| ||| |||||||||||||    
T  10108205 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcgcggtgtttgctcagttcctcttgaaagatctacatca 10108304  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| |||||||||||||| |||||  ||  ||||||||||||||||| ||||||  ||||| | |||||| | ||||||||||||||||||||    
T  10108305 gtcaattacaaattcaaccaatgatttgaacgataacgttgcagatccagatgcatgagtatttcggcgacttaag-ttttatcatattatttgtag 10108400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 36461550 - 36461355
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||  |||||||||| |||||||||||||    
T  36461550 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttgtcgcggtgtttgttctgttcctattgaaagatctacatca 36461451  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
     |||||| ||||||||| |||| |||||| || ||||||| ||||||  |||||||||  ||||| | || ||||| ||||||||||||||||||||    
T  36461450 atcaattacaaattcaagcaatgatttggacgtcaacgttacagatctggaagcatgagtatttcggcgatttagg-ttttatcatattatttgtag 36461355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 40487294 - 40487489
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgttta-atttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatc 101  Q
    |||| ||||||||||||| ||||||||||||||||||||| |||||  ||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  40487294 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgttttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctacatc 40487393  T
Q  102 agtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    |||||| | |||||||| ||||| |||||| || |||| |||||||||| |||||||    ||||| |||||||||| ||||||||||||||||||||    
T  40487394 agtcaa-tacaaattcagccaatgatttggacgtcaacattgcagatccggaagcataggtatttcggtgacttagg-ttttatcatattatttgtag 40487489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 6954815 - 6954620
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| | ||||||||||||||||||| ||||| ||||||||| ||||| ||||||||||| ||||||||||| |||||||||||||    
T  6954815 tcgtctaagtgcggcgttgtattgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcacggtgtttgttcagttcctattgaaagatctacatca 6954716  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| |||||||||||||| |||||| || ||| | ||||||||| ||||||||   ||||| |||||||| | |||||||| |||||||||||    
T  6954715 gtcaattacaaattcaaccaatgatttggacgtcaatgctgcagatccggaagcatgggtatttcggtgacttatg-ttttatcaaattatttgtag 6954620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 38545768 - 38545963
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||| || |||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| || | |||| |||||| ||||||    
T  38545768 tcgtctaagtacgacgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttgtcgcggtgtttgtttattttccattgaaagatcgacatca 38545867  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| |||||||||||||| ||||||||| |||||||| ||||||  || ||||  |||||  |||||||||| ||||||||||||||||||||    
T  38545868 gtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccgaaaacatgcgaatttaggtgacttagg-ttttatcatattatttgtag 38545963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 52923236 - 52923041
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| |||||| |||| | ||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||| ||||||| ||| |||||||| || |    
T  52923236 tcgtctaagtgtggcgctgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcgcggtgtttgttcagttcctcttgaaagatctatatta 52923137  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| |||||||||||||| |||||| || ||||||||||||||| ||||||||   ||||| |||||||| | ||||||||||||||||||||    
T  52923136 gtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaag-ttttatcatattatttgtag 52923041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 33579854 - 33580044
Alignment:
Q  9 taagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaa 107  Q
    ||||||| ||||| ||||||||||||||||||||  ||||| |||| |||||||||||||||||| ||||| ||| ||||| |||||| |||||||||||    
T  33579854 taagtgcagcgttgtgttgttcgtcgtcttgtgcatcgtttgattttgcgtcttgtcgcggtgttcgtttatttcatattgaaagatcgacatcagtcaa 33579953  T
Q  108 ttgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    || |||||||||||||| ||||||||| |||||||| |||||| |||||| |  |||||| |||| ||||| ||||||||||||||||||||    
T  33579954 ttacaaattcaaccaatgatttgggcgtcaacgttgaagatccggaagcacgtgaatttcggtgatttagg-ttttatcatattatttgtag 33580044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 10 - 199
Target Start/End: Original strand, 47896127 - 47896316
Alignment:
Q  10 aagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaat 108  Q
    ||||| |||||| |||||||||| |||||||||| ||||| ||||| |||||||||||||| |||||||||||||||||| ||||| |||||||||||||    
T  47896127 aagtgtggcgttgtgttgttcgttgtcttgtgcggcgtttgatttcacgtcttgtcgcggtatttgtttagttcctattgaaagatttacatcagtcaat 47896226  T
Q  109 tgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    | |||||||||||||| |||||||||  || |||||| |||| |||||||||| |||||  | ||||||| ||||||| ||||||||||||    
T  47896227 tacaaattcaaccaatgatttgggcgtaaatgttgcatatccggaagcatgaatatttcgataacttagg-ttttatcttattatttgtag 47896316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 48650853 - 48650658
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| |||||||||| || |||||||||| |||||||||| | ||| ||||||||||||||||||||||||||| ||||||||||| ||||||| |||||    
T  48650853 tcgtctaagtgcggcattgtgttgttcgttgtcttgtgcggcatttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctgcatca 48650754  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
     |||||| |||||||||||||| |||||| || ||||||||||||||   ||| ||||  ||||| |||||||| | ||||||||||||||||||||    
T  48650753 atcaattacaaattcaaccaataatttggacgtcaacgttgcagatctgaaagaatgagtatttcggtgacttaag-ttttatcatattatttgtag 48650658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 45568564 - 45568369
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| ||||||||||||||||||| | ||||| ||||||||||||||| ||||||||||| ||||||| ||| || | ||||||||    
T  45568564 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgtggcgtttgatttcgcgtcttgtcacggtgtttgttcagttcctgttgaaataactacatca 45568465  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
     |||||| ||||||||| |||| |||||| || |||| |||||||||| |||||||| | ||||  |||| ||||| ||||||||||||||||||||    
T  45568464 atcaattacaaattcaaacaatgatttggacgtcaactttgcagatccggaagcatggatatttgggtgatttagg-ttttatcatattatttgtag 45568369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 38860239 - 38860036
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatcta----- 97  Q
    |||| |||||||| |||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||         
T  38860239 tcgtctaagtgcgacgttttgttgttcgtcgtcttgtgcggcgattgatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatct 38860140  T
Q  98 -catcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcat--gaaaatttcagtgacttaggcttttatcatattatt 194  Q
     |||||||| ||| |||||||||||||| | |||| || |||||||||||||||  || |||  | | ||||  |||||||||| |||||||||||||||    
T  38860139 acatcagtcgattacaaattcaaccaatgacttggtcgtcaacgttgcagatccgaaaacatgggtatattttggtgacttagg-ttttatcatattatt 38860041  T
Q  195 tgtag 199  Q
    |||||    
T  38860040 tgtag 38860036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 54148960 - 54149155
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtctt-gtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatc 101  Q
    |||| |||||||||| || |||||||||||||||  ||||| | ||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  54148960 tcgtctaagtgcggcattgtgttgttcgtcgtctaagtgcggcatttgatttcgcgtattgtcgcggtgtttgtttagttcctattgaaagatctacatc 54149059  T
Q  102 agtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    | || ||| ||||||  |||||| ||||||||| ||||||||||||||| ||||||||   ||||| ||||||| || ||||||||||||||||||||    
T  54149060 aatc-attacaaatttcaccaatgatttgggcgtcaacgttgcagatccggaagcatggctatttcggtgactt-ggattttatcatattatttgtag 54149155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 24 - 199
Target Start/End: Complemental strand, 9797633 - 9797458
Alignment:
Q  24 gttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaacca 122  Q
    |||||||||||||||||||| ||||| |||| |||||||||||||||||||||| ||||||||||| ||||||||||||| |||||| ||||||||| ||    
T  9797633 gttgttcgtcgtcttgtgcggcgtttgattttgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctacatcaatcaattacaaattcaagca 9797534  T
Q  123 attatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    || |||||  ||  |||||||||||||| ||||||||   |||| ||||| ||| | ||||||||||||||||||||    
T  9797533 atgatttgaacgttaacgttgcagatccggaagcatgggtatttaagtgatttatg-ttttatcatattatttgtag 9797458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 12149898 - 12149757
Alignment:
Q  9 taagtgcggcgttttgttgttcgtcgtcttgtgc-gcgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaa 107  Q
    ||||||||||||| | |||||| ||||||||||| |||||| |||||||||||||||||| |||| ||||||||||||||| |||||| |||||||||      
T  12149898 taagtgcggcgttgtattgttcatcgtcttgtgcagcgtttgatttcgcgtcttgtcgcgatgttcgtttagttcctattgaaagatcgacatcagtctc 12149799  T
Q  108 ttgcaaattcaaccaattatttgggcggcaacgttgcagatc 149  Q
    || |||||||||||||| ||||||||| ||||||||||||||    
T  12149798 ttacaaattcaaccaatgatttgggcgtcaacgttgcagatc 12149757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 58 - 199
Target Start/End: Complemental strand, 46304584 - 46304444
Alignment:
Q  58 tcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagca 157  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||| |||| |||| |||| |||||||||| ||||||    
T  46304584 tcttgtcgcggtgtttgtttagttcctattgaaatatctacatcagtcaattacaaattcaaccaatgatttaggcgtcaacattgcagatccggaagca 46304485  T
Q  158 tgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||   ||||| |||||||||| |||||||||||||| |||||    
T  46304484 tgggtatttcggtgacttagg-ttttatcatattatatgtag 46304444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 4 - 195
Target Start/End: Complemental strand, 43488709 - 43488518
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| |||||| |||||| ||||||||||||||||||||| ||||| |||||||||||||| |||||||||||| |||| |||||| || |||| ||| |    
T  43488709 tcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttgttgcggtgtttgttcagtttctattgaaatatctgcatta 43488610  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattattt 195  Q
     ||||||  |||||||| |||| |||||  || ||||||||||||||| |||||||||  ||||| |||| ||||| ||||||||||||||||    
T  43488609 atcaattataaattcaagcaatgatttgaacgtcaacgttgcagatccggaagcatgagtatttcggtgatttagg-ttttatcatattattt 43488518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 44 - 203
Target Start/End: Complemental strand, 7448992 - 7448834
Alignment:
Q  44 cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttg 143  Q
    ||||| ||||| ||||||||| ||||||||||| ||||||| ||  |||||||||||||||||||| |||||||||||||| |||||| || ||||||||    
T  7448992 cgtttgatttcacgtcttgtctcggtgtttgttcagttcctgtttaaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttg 7448893  T
Q  144 cagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacat 203  Q
    || |||| |||||||||  ||||| |||||||| | ||| ||||||||||||||||||||    
T  7448892 catatccggaagcatgagtatttcggtgacttaag-tttcatcatattatttgtagacat 7448834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 44 - 203
Target Start/End: Complemental strand, 7457134 - 7456976
Alignment:
Q  44 cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttg 143  Q
    ||||| ||||| ||||||||| ||||||||||| ||||||| ||  |||||||||||||||||||| |||||||||||||| |||||| || ||||||||    
T  7457134 cgtttgatttcacgtcttgtctcggtgtttgttcagttcctgtttaaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttg 7457035  T
Q  144 cagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacat 203  Q
    || |||| |||||||||  ||||| |||||||| | ||| ||||||||||||||||||||    
T  7457034 catatccggaagcatgagtatttcggtgacttaag-tttcatcatattatttgtagacat 7456976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 10 - 194
Target Start/End: Original strand, 43016830 - 43017014
Alignment:
Q  10 aagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaat 108  Q
    |||||||||||| ||||||||||  ||||||| | ||||| |||| | ||||||||||||||||||||||||||||  || |||||| || | |||||||    
T  43016830 aagtgcggcgttgtgttgttcgttatcttgtgtggcgtttgattttgtgtcttgtcgcggtgtttgtttagttccttgtgaaagatcgacgttagtcaat 43016929  T
Q  109 tgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatt 194  Q
    | |||||||||||||| ||||||||| ||||||||||||||| || |||||   ||||| |||||||||| | |||||||||||||    
T  43016930 tacaaattcaaccaatgatttgggcgtcaacgttgcagatccggatgcatgtgcatttcggtgacttagg-tgttatcatattatt 43017014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 23800029 - 23799834
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||| ||||||||| |||| || ||||||||||||| ||||| ||||||||||||||||| ||||| | ||||||||| ||| |||| | ||| ||    
T  23800029 tcgtctaattgcggcgttgtgttcttagtcgtcttgtgcggcgtttgatttcgcgtcttgtcgcagtgttcgcttagttcctgttgaaagaacgacacca 23799930  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| ||||||||| |||| |||| |||| |||||||||||||||  || |||||  |||||| ||||||| | ||||||||||||||||||||    
T  23799929 gtcaattacaaattcaatcaatgatttcggcgtcaacgttgcagatccgaaaacatgagtatttcaatgactta-gattttatcatattatttgtag 23799834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 47042168 - 47041972
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtctt-gtcgcggtgtttgtttagttcctattggaagatctacatc 101  Q
    |||| ||||| || |||| ||||||||||||||||||||| ||||| ||||||||| || || ||||||||  |||| ||||||||| ||||||  ||||    
T  47042168 tcgtctaagtacgacgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtttttgtagcggtgttcatttatttcctattgaaagatcagcatc 47042069  T
Q  102 agtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||| || ||||||||||||||  |||||||| |||||||| |||||| ||||||||  |||||  |||||||||| ||| ||||||||||||||||    
T  47042068 agtcagttacaaattcaaccaatggtttgggcgtcaacgttgaagatccggaagcatgtgaattttggtgacttagg-tttcatcatattatttgtag 47041972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 4 - 203
Target Start/End: Complemental strand, 20609018 - 20608819
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||| ||||||||| ||||||| ||||||||||||| | ||| |||| |||||||||||||||||||||||||||||||||| || ||| |||| |    
T  20609018 tcgtctaattgcggcgttgtgttgttagtcgtcttgtgcggcatttgattttgcgtcttgtcgcggtgtttgtttagttcctattgaaatatcaacatta 20608919  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagaca 202  Q
    |||| || ||| ||||| |||| ||||| ||  ||| ||||||||||| ||||||||| |||||| |||| ||| | |||||| |||||| ||| |||||    
T  20608918 gtcatttacaagttcaatcaatgatttgagcatcaaagttgcagatccggaagcatgagaatttcggtgattta-gattttattatattacttgcagaca 20608820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 18010994 - 18011184
Alignment:
Q  9 taagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaa 107  Q
    |||||| | |||| |||||||| || ||||||||| ||||| ||||| | ||||||| ||||||| |||||||| |||||| |||||| || | ||||||    
T  18010994 taagtgtgacgttgtgttgttcatcatcttgtgcggcgtttgatttcacatcttgtcacggtgttcgtttagtttctattgaaagatcgactttagtcaa 18011093  T
Q  108 ttgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    |  ||| ||||| |||| | ||||||| |||||||||||||||||||||||||| |||||||||||||| | | | ||||||||||||||||    
T  18011094 taacaatttcaatcaatcacttgggcgtcaacgttgcagatccagaagcatgaatatttcagtgactta-gatataatcatattatttgtag 18011184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 4 - 159
Target Start/End: Original strand, 32701462 - 32701616
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| | ||||  ||||||||||||| ||||| ||||||||| |||| ||| |||||||| ||||||||||| |||||||||||||    
T  32701462 tcgtctaagtgcggcgttgtattgt--gtcgtcttgtgcggcgtttgatttcgcgttttgttgcgatgtttgttcagttcctattgaaagatctacatca 32701559  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatg 159  Q
      ||||| ||||||||| |||| ||||||||| |||||||| |||||| ||||||||    
T  32701560 accaattacaaattcaatcaatgatttgggcgtcaacgttgtagatccggaagcatg 32701616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 40556681 - 40556866
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||||          |||||||||| ||||||| ||| |||||||||||||    
T  40556681 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgc----------ggtgtttgttcagttcctcttgaaagatctacatca 40556770  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| |||||||||||||| |||||| || |||||||| | |||| ||||||||   ||||  |||||||| | ||||||||||||||||||||    
T  40556771 gtcaattacaaattcaaccaatgatttggacgtcaacgttgtaaatccggaagcatgtgtattttggtgacttaag-ttttatcatattatttgtag 40556866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 19339145 - 19339339
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| |||||| | |||| |||||||||||  |||||||| ||||||||||| |||||||||| || ||| ||||||||||||||| |||||| || | |    
T  19339145 tcgtctaagtgtgacgttgtgttgttcgtcaacttgtgcggcgtttaatttcacgtcttgtcgtggcgttcgtttagttcctattgaaagatcaacttta 19339244  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| ||||||||| |||| |||| || | ||| ||||||||||||||||||||   ||||| |||||||| | |||||||||||||| |||||    
T  19339245 gtcaattacaaattcaatcaatgatttaggtgtcaatgttgcagatccagaagcatgggtatttc-gtgactta-gattttatcatattatctgtag 19339339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 55 - 199
Target Start/End: Original strand, 21431634 - 21431777
Alignment:
Q  55 gcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaa 154  Q
    |||| |||||| |||||||||| | || |||||| |||||||||||||||||||| |||||||||||||  |||||| || ||||||||||||||| |||    
T  21431634 gcgttttgtcgtggtgtttgttcaatttctattgaaagatctacatcagtcaattacaaattcaaccaacgatttggacgtcaacgttgcagatccggaa 21431733  T
Q  155 gcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    |||||   ||||| |||||||| | ||||||||||||||||||||    
T  21431734 gcatgggtatttcggtgacttaag-ttttatcatattatttgtag 21431777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 119
Target Start/End: Complemental strand, 36910755 - 36910643
Alignment:
Q  9 taagtgcggcgttttgttgttcgtcgtcttgtgc-gcgtttaatttcgcgtcttg-tcgcggtgtttgtttagttcctattggaagatctacatcagtca 106  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||| |||| ||||||||||| ||||| ||||||| |||    
T  36910755 taagtgcggcgttttgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttgttcgcggtgtctgttcagttcctattgaaagatgtacatcaatca 36910656  T
Q  107 attgcaaattcaa 119  Q
    ||| |||||||||    
T  36910655 attacaaattcaa 36910643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 23 - 199
Target Start/End: Original strand, 45424787 - 45424962
Alignment:
Q  23 tgttgttcgtcgtcttgtgcgcgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaacca 122  Q
    ||||||| |||||| |||| | |||| ||||||||| |||| |||||||||||||||||||||||| || ||| ||||| ||||||| ||||||||| ||    
T  45424787 tgttgtttgtcgtcctgtgtgggtttgatttcgcgtattgttgcggtgtttgtttagttcctattgaaaaatcgacatcggtcaattacaaattcaatca 45424886  T
Q  123 attatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    || ||||||||| |||| |||||||||| ||| ||||   | ||| |||||||  | ||||||||||||||||||||    
T  45424887 atgatttgggcgtcaacattgcagatccggaatcatgggtacttcggtgactt-cgattttatcatattatttgtag 45424962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 4 - 160
Target Start/End: Complemental strand, 35865051 - 35864894
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||| ||||||||| ||||||| ||||||||||| | ||||| |||| ||||||| |||||||||| ||||||||||||||| |||||| ||||||    
T  35865051 tcgtctaattgcggcgttgtgttgttagtcgtcttgtgtggcgtttgattttgcgtcttttcgcggtgttcgtttagttcctattgaaagatcgacatca 35864952  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatga 160  Q
     |||||| ||||||||| |||| |||||| ||  ||| |||||||||  |||||||||    
T  35864951 atcaattacaaattcaatcaatgatttggacgttaacattgcagatctggaagcatga 35864894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 4 - 193
Target Start/End: Complemental strand, 20987918 - 20987729
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||| ||||| ||| |||| || ||||||||||| | | ||| |||||||||||||||||| |||||||||||||||||||| |||||| |||||     
T  20987918 tcgtctaattgcggtgttgtgttcttagtcgtcttgtgtggcatttgatttcgcgtcttgtcgcgatgtttgtttagttcctattgaaagatcgacatcg 20987819  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattat 193  Q
    ||||||| ||| ||  | |||| ||||||| | ||||||| ||||||  ||||||| | ||||||||| ||||| | ||||||||||||||    
T  20987818 gtcaattacaagttacatcaatgatttgggagtcaacgttacagatctggaagcataagaatttcagtaactta-gattttatcatattat 20987729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 23 - 196
Target Start/End: Original strand, 45425580 - 45425753
Alignment:
Q  23 tgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaacc 121  Q
    |||||| ||||||| | |||| ||||| ||||||||| |||||||||||||||||||||||| |||| |||||| | |||| |||||| ||||||||| |    
T  45425580 tgttgtccgtcgtcctatgcggcgtttgatttcgcgtattgtcgcggtgtttgtttagttcccattgaaagatcgaaatcaatcaattacaaattcaatc 45425679  T
Q  122 aattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 196  Q
    ||| ||||||||  |||| |||||||||| ||| ||| |  ||||| |||||||  | |||||||||||||||||    
T  45425680 aatgatttgggcttcaacattgcagatccggaaccataagtatttcggtgactt-cgattttatcatattatttg 45425753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 18 - 199
Target Start/End: Original strand, 53099773 - 53099954
Alignment:
Q  18 cgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaatt 116  Q
    |||| ||||||| ||| ||||||||| ||||| ||||| ||||||||||| || ||  |||||||||||||| ||||||  ||| |||||||| ||| ||    
T  53099773 cgttgtgttgttagtcatcttgtgcggcgtttgatttcacgtcttgtcgccgtattcatttagttcctattgaaagatcagcatgagtcaattacaagtt 53099872  T
Q  117 caaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||| |||| ||||||||| ||||||| || |||| ||||||||  |||| |||||||||| | ||||| ||||||||||||||    
T  53099873 caatcaatgatttgggcgtcaacgttacatatccggaagcatgtgaattccagtgactta-gattttagcatattatttgtag 53099954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 20465092 - 20464896
Alignment:
Q  1 tcatcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctaca 99  Q
    ||||||| |||||| || ||| |||||||||||||||||| || ||||| |||| ||||||||||||||||||  ||||  |||||||| |||||| |      
T  20465092 tcatcgtctaagtgaggtgttgtgttgttcgtcgtcttgtacggcgtttgattttgcgtcttgtcgcggtgttcatttaaatcctattgaaagatcgatt 20464993  T
Q  100 tcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgt 197  Q
    |||||||||| |||||||||  ||| ||||||||| ||| |||||||||    ||||||||  ||||| ||||||||   ||||||||||||||||||    
T  20464992 tcagtcaattacaaattcaataaatgatttgggcgtcaatgttgcagatttgaaagcatgagtatttcggtgactta-aattttatcatattatttgt 20464896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 44960071 - 44959952
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||| ||| | || |||||||||||||||| ||||| |||| |||| |||||| |||||||||| ||||  ||||| |||||||||||||    
T  44960071 tcgtctaagtgcggtgttgtattattcgtcgtcttgtgcggcgtttgattttgcgttttgtcgtggtgtttgttcagtttttattgaaagatctacatca 44959972  T
Q  103 gtcaattgcaaattcaacca 122  Q
    || |||| ||||||||||||    
T  44959971 gttaattacaaattcaacca 44959952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 23 - 199
Target Start/End: Original strand, 21313024 - 21313200
Alignment:
Q  23 tgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaacc 121  Q
    ||||||||||||||||||  | | ||| ||||| ||| ||||||||||||| |||||||| |||||| || |||   ||||||||||| ||||||||| |    
T  21313024 tgttgttcgtcgtcttgtctgacttttgatttcacgttttgtcgcggtgttcgtttagtttctattgaaatatcggtatcagtcaattacaaattcaatc 21313123  T
Q  122 aattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||| |||||| || |||||| ||| |||   || |||||  ||||| |||||||| | ||||||||||||||||||||    
T  21313124 aatgatttggacgtcaacgtagcatatctgaaatcatgagtatttcggtgactta-gattttatcatattatttgtag 21313200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 50 - 199
Target Start/End: Complemental strand, 26275891 - 26275743
Alignment:
Q  50 atttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatc 149  Q
    |||||||||||||||||| |||| |||||||||||| || |||||| ||||||||||  | ||||||||| |||| |||| |  |  ||||||||||||     
T  26275891 atttcgcgtcttgtcgcgatgttcgtttagttcctagtgaaagatcgacatcagtcatatacaaattcaatcaatgattttgttgttaacgttgcagatt 26275792  T
Q  150 cagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    |  || |||||  ||||||||||||||   ||||||||||||||||||||    
T  26275791 cgaaaacatgagtatttcagtgactta-tattttatcatattatttgtag 26275743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 23 - 199
Target Start/End: Original strand, 37040757 - 37040933
Alignment:
Q  23 tgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaacc 121  Q
    ||||| ||||||||||||||| ||||| ||||| ||||||||||||| ||| |||||||| |||||| |||||  ||||| |||||||  |||| ||| |    
T  37040757 tgttggtcgtcgtcttgtgcggcgtttgatttcacgtcttgtcgcggcgttcgtttagtttctattgaaagattgacatcggtcaattataaatccaatc 37040856  T
Q  122 aattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||| ||||||| |  || ||||| |||| |||| |||||  ||||| |||||||| | ||| ||||||||| ||||||    
T  37040857 aatgatttgggtgtgaatgttgccgatctagaaacatgagtatttcggtgactta-gatttaatcatattagttgtag 37040933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 159
Target Start/End: Original strand, 14859466 - 14859615
Alignment:
Q  11 agtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaatt 109  Q
    ||||||| ||| ||||||||||| ||||||| | | |||||||| || |||||| ||||||||  ||| |||| ||||| ||||||  | ||| |||||     
T  14859466 agtgcggtgttgtgttgttcgtcatcttgtgtgacatttaattttgcatcttgttgcggtgttcatttggttcatattgaaagatcagcttcaatcaatc 14859565  T
Q  110 gcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatg 159  Q
     || |||||| |||| |||||| || ||||||||||||||||||||||||    
T  14859566 acatattcaatcaatgatttggacgtcaacgttgcagatccagaagcatg 14859615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 159
Target Start/End: Complemental strand, 31271926 - 31271772
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgc-gcgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| |||||||||  || |||||||||||||||||||| || ||| |||||||||||||||||||  || ||||||||| ||| | |||||| || |||    
T  31271926 tcgtctaagtgcggttttgtgttgttcgtcgtcttgtgcggcatttgatttcgcgtcttgtcgcggcattcgtttagttcatatggaaagatcgacttca 31271827  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatg 159  Q
    || ||   ||||||||| |||  ||||||||| ||||  ||||||||| ||||||||    
T  31271826 gttaa--acaaattcaatcaaagatttgggcgtcaacaatgcagatccggaagcatg 31271772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 159
Target Start/End: Original strand, 51923758 - 51923852
Alignment:
Q  65 gcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatg 159  Q
    |||||||| |||| |||| ||||| ||||||  | |||| |||| |||||||||| |||| |||||| || ||||||||||||||||||||||||    
T  51923758 gcggtgttcgtttggttcgtattgaaagatcagcttcagacaatcgcaaattcaatcaatgatttggacgtcaacgttgcagatccagaagcatg 51923852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 29239306 - 29239459
Alignment:
Q  1 tcatcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcgc----gtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatct 96  Q
    ||||||| | ||||||||||| |||||||||||||||||||||     |||| ||||| |||||||| | |||||| |||| |||| ||||||||||||     
T  29239306 tcatcgtctgagtgcggcgttgtgttgttcgtcgtcttgtgcggcgctgtttgatttcacgtcttgttgtggtgttcgtttggttcgtattggaagatca 29239405  T
Q  97 acatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatcc 150  Q
     | |||||||||  || ||| || |||| |||||| || | |||||| ||||||    
T  29239406 gcttcagtcaatcacagatttaatcaatgatttggacgtcgacgttgtagatcc 29239459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 160
Target Start/End: Original strand, 29922067 - 29922183
Alignment:
Q  44 cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttg 143  Q
    ||||| |||||||||||||| ||||||| | ||| |||| ||||| |||||| || |||  ||||  || |||||| |||| |||||| || ||||||||    
T  29922067 cgtttgatttcgcgtcttgttgcggtgtatatttcgttcatattgaaagatcaacttcaaccaatcacatattcaatcaatgatttggacgtcaacgttg 29922166  T
Q  144 cagatccagaagcatga 160  Q
    ||||||||||| |||||    
T  29922167 cagatccagaaacatga 29922183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 160
Target Start/End: Original strand, 29971220 - 29971336
Alignment:
Q  44 cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttg 143  Q
    ||||| |||||||||||||| ||||||| | ||| |||| ||||| |||||| || |||  ||||  || |||||| |||| |||||| || ||||||||    
T  29971220 cgtttgatttcgcgtcttgttgcggtgtatatttcgttcatattgaaagatcaacttcaaccaatcacatattcaatcaatgatttggacgtcaacgttg 29971319  T
Q  144 cagatccagaagcatga 160  Q
    ||||||||||| |||||    
T  29971320 cagatccagaaacatga 29971336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 199
Target Start/End: Original strand, 42460826 - 42460913
Alignment:
Q  111 caaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||||| |||| ||||||||| ||||||||||||| |||||||||||| |||   |||| ||| | ||||||||||||||||||||    
T  42460826 caaattcaatcaatgatttgggcgtcaacgttgcagatacagaagcatgaacattctggtgattta-gattttatcatattatttgtag 42460913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 44 - 199
Target Start/End: Original strand, 48199787 - 48199941
Alignment:
Q  44 cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttg 143  Q
    ||||| ||||||  |||||| | |||||| |||| |||||||||| |||||| || ||| ||||||  ||||| || |||| |||||| || | ||||||    
T  48199787 cgtttgatttcgtatcttgttgtggtgttcgtttggttcctattgaaagatcaacttcaatcaattataaatttaatcaatgatttggacgtcgacgttg 48199886  T
Q  144 cagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    || |||||||||||||   ||||| |||||||| |  ||||||||||||| |||||    
T  48199887 caaatccagaagcatgtgcatttcggtgactta-gaatttatcatattatctgtag 48199941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 51303654 - 51303606
Alignment:
Q  111 caaattcaaccaattatttgggcggcaacgttgcagatccagaagcatg 159  Q
    ||||||||| |||| ||||||||| ||||||||||||||||||||||||    
T  51303654 caaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcatg 51303606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 199
Target Start/End: Original strand, 19619784 - 19619877
Alignment:
Q  104 tcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    |||||| ||| ||||| |||| |||| || | |||||||| |||||| ||||||||| |||||| |||||||||  ||||||||||||||||||||    
T  19619784 tcaattacaagttcaatcaatgatttaggtgtcaacgttgtagatcc-gaagcatgagaatttcggtgacttaga-ttttatcatattatttgtag 19619877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 155
Target Start/End: Original strand, 8914789 - 8914833
Alignment:
Q  111 caaattcaaccaattatttgggcggcaacgttgcagatccagaag 155  Q
    ||||||||| |||| ||||||||| ||||||||||||||||||||    
T  8914789 caaattcaatcaatgatttgggcgtcaacgttgcagatccagaag 8914833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 16235503 - 16235551
Alignment:
Q  111 caaattcaaccaattatttgggcggcaacgttgcagatccagaagcatg 159  Q
    ||||||||| |||| ||||||||| |||||||||||||| |||||||||    
T  16235503 caaattcaatcaatgatttgggcgtcaacgttgcagatcaagaagcatg 16235551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 157
Target Start/End: Complemental strand, 53807979 - 53807823
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcgc----gtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctaca 99  Q
    |||| |||||||| | || |||||||||||||||| ||||     |||| |||| || |||||| || ||||| |||  |||| ||||| |||||| ||     
T  53807979 tcgtctaagtgcgaccttgtgttgttcgtcgtcttctgcggcattgtttgatttggcatcttgttgctgtgttcgttg-gttcatattgaaagatcaact 53807881  T
Q  100 tcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagca 157  Q
    |||||||||  || |||||| |||| |||||| || |||||||||| |||||||||||    
T  53807880 tcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcatatccagaagca 53807823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 4711584 - 4711646
Alignment:
Q  136 caacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||||||||||| ||||||||   ||||| |||||||| | ||||||||||||||||||||    
T  4711584 caacgttgcagatccggaagcatgggtatttcggtgacttaag-ttttatcatattatttgtag 4711646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 63 - 114
Target Start/End: Original strand, 46220699 - 46220750
Alignment:
Q  63 tcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaa 114  Q
    |||||||||| ||||||||||||||| || ||| ||||||||||||| ||||    
T  46220699 tcgcggtgttcgtttagttcctattgaaatatcaacatcagtcaattacaaa 46220750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 159
Target Start/End: Complemental strand, 21289871 - 21289777
Alignment:
Q  65 gcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatg 159  Q
    |||||||| |||| |||| ||||| ||||||  | |||| ||||  ||||||||| |||| |||| || | |||||||||||||| |||||||||    
T  21289871 gcggtgttcgtttggttcgtattgaaagatcagcttcagacaatcacaaattcaatcaatgattttggtgtcaacgttgcagatctagaagcatg 21289777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 109; Significance: 5e-55; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 15466 - 15657
Alignment:
Q  9 taagtgcggcgttttgttgttcgtcgtcttgtgcg-cgttta-atttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtca 106  Q
    ||||||||| ||| ||||||||||||||||||||| |||||  ||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||    
T  15466 taagtgcggtgttgtgttgttcgtcgtcttgtgcggcgttttgatttcgcgtcttgtcgcggtgtttgttcatttcctattgaaagatctacatcagtca 15565  T
Q  107 attgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||| |||||||||||||| |||||| || |||| |||||||||| |||||||| | ||||| |||||||||| ||||||||||||||||||||    
T  15566 attacaaattcaaccaatgatttggacgtcaacattgcagatccggaagcatggatatttcggtgacttagg-ttttatcatattatttgtag 15657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 1314 - 1509
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| ||||||||||||||||||| | ||||| |||||||||||||| |||||||| ||||||||||||||| ||||||  |||||    
T  1314 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgtggcgtttgatttcgcgtcttgttgcggtgttcgtttagttcctattgaaagatcggcatca 1413  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| ||||||| |||||| ||||||||| ||||||||||| || |||||||||  |||||| |||| ||||| ||||||||||||||||||||    
T  1414 gtcaattacaaattcgaccaataatttgggcgtcaacgttgcagttctagaagcatgtgaatttcggtgatttagg-ttttatcatattatttgtag 1509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 2095 - 1897
Alignment:
Q  1 tcatcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctaca 99  Q
    ||||||| |||||||||| ||||||||||||||||||| || | ||||| ||||||| |||||||||||||||| |||||||||||||| ||||||||||    
T  2095 tcatcgtctaagtgcggcattttgttgttcgtcgtcttatgtggcgtttgatttcgcatcttgtcgcggtgtttttttagttcctattgaaagatctaca 1996  T
Q  100 tcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    | |||||||| ||||||||||||||  |||||||| |||||||||||||||  || ||| |  ||||| |||| ||||| ||||||||||||||||||||    
T  1995 ttagtcaattacaaattcaaccaatggtttgggcgtcaacgttgcagatccgaaaacataagtatttcggtgatttagg-ttttatcatattatttgtag 1897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 66161 - 65966
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||| ||||| ||||||||||||||||||| | ||| | |||| || |||||||| ||||||||||||||| | ||||||||||| ||||||    
T  66161 tcgtctaagtgcagcgttatgttgttcgtcgtcttgtgtggcgtctgattttgcatcttgtcgtggtgtttgtttagttacaattggaagatcgacatca 66062  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||||| |||||||||||||| ||||||| | ||||||||||||||| ||||||||   ||||| |||||||| | ||||||||||||||||||||    
T  66061 gtcaattacaaattcaaccaatgatttgggtgccaacgttgcagatccggaagcatgggtatttcggtgacttatg-ttttatcatattatttgtag 65966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 89; Significance: 4e-43; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 10161 - 9966
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| |||||||||| || | ||||||||||||||||||| ||||| |||||||||||||||||||||||  |||| ||||||||| |||||| |||||     
T  10161 tcgtctaagtgcggctttgttttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttgtcgcggtgttcatttaattcctattgaaagatcgacatcg 10062  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
     |||||| |||||||||||||| ||||| | | ||||||||||||||||||| ||||   |||||||||| || || ||||||||||||||||||||    
T  10061 atcaattacaaattcaaccaatgatttgagagtcaacgttgcagatccagaaacatgtgtatttcagtgaatt-gggttttatcatattatttgtag 9966  T

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Target: scaffold0634 (Bit Score: 82; Significance: 6e-39; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 8487 - 8628
Alignment:
Q  9 taagtgcggcgttttgttgttcgtcgtcttgtgc-gcgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaa 107  Q
    ||||||||||||| | |||||| ||||||||||| |||||| |||||||||||||||||| |||| ||||||||||||||| |||||| |||||||||      
T  8487 taagtgcggcgttgtattgttcatcgtcttgtgcagcgtttgatttcgcgtcttgtcgcgatgttcgtttagttcctattgaaagatcgacatcagtctc 8586  T
Q  108 ttgcaaattcaaccaattatttgggcggcaacgttgcagatc 149  Q
    || |||||||||||||| ||||||||| ||||||||||||||    
T  8587 ttacaaattcaaccaatgatttgggcgtcaacgttgcagatc 8628  T

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Target: scaffold0026 (Bit Score: 81; Significance: 2e-38; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 4 - 159
Target Start/End: Complemental strand, 71983 - 71827
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcgc-gtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| ||||||||||||| |||||||||| ||||||||||  |||| ||||| ||| ||||||||||||||||| ||||||||||| ||||||||||| |    
T  71983 tcgtctaagtgcggcgttgtgttgttcgttgtcttgtgcggagtttgatttcacgttttgtcgcggtgtttgttcagttcctattgaaagatctacatta 71884  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatg 159  Q
    ||||||| |||||||||||||| ||||||  | |||||||| |||||| ||||||||    
T  71883 gtcaattacaaattcaaccaatgatttggatgtcaacgttgtagatccggaagcatg 71827  T

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Target: scaffold0088 (Bit Score: 77; Significance: 6e-36; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 43 - 199
Target Start/End: Original strand, 50786 - 50941
Alignment:
Q  43 gcgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgtt 142  Q
    |||||| ||||||||| ||||||||||||||||| | ||||| ||  ||||||||| | |||||||| |||||||||||||| |||||| || |||||||    
T  50786 gcgtttgatttcgcgttttgtcgcggtgtttgttcatttcctcttaaaagatctacgttagtcaattacaaattcaaccaatgatttggacgtcaacgtt 50885  T
Q  143 gcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    |||||||| |||||||| | ||||| |||||||| | ||||||||||||||||||||    
T  50886 gcagatccggaagcatggatatttcggtgacttaag-ttttatcatattatttgtag 50941  T

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Target: scaffold0262 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 35 - 199
Target Start/End: Complemental strand, 1907 - 1743
Alignment:
Q  35 tcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggc 133  Q
    ||||||||| |||||  |||||||||||||||||||||| ||||| || ||||||||||||| ||||| || |||| ||||||||| |||| ||||||||    
T  1907 tcttgtgcgtcgtttggtttcgcgtcttgtcgcggtgttcgtttaatttctattggaagatcgacatcggtaaattacaaattcaatcaatgatttgggc 1808  T
Q  134 ggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
      ||||||||||||||| ||||||||   |||||  |||||||   ||||||||||||||||||||    
T  1807 accaacgttgcagatccggaagcatgggtatttcgatgactta-tattttatcatattatttgtag 1743  T

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Target: scaffold0121 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 16 - 195
Target Start/End: Complemental strand, 31381 - 31202
Alignment:
Q  16 ggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaa 114  Q
    |||||| ||||||| ||||||||||||| ||||| ||||| ||||||||| ||||  |  |||||||||||||| |||||| |||||| |||||| ||||    
T  31381 ggcgttatgttgttagtcgtcttgtgcgacgtttgatttcccgtcttgtcacggtaatcatttagttcctattgaaagatcgacatcactcaattacaaa 31282  T
Q  115 ttcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattattt 195  Q
    ||||| |||  ||||| ||  ||| ||||||||||| ||||||||   ||||| |||||||| | ||||||||||||||||    
T  31281 ttcaatcaacgatttgagcatcaatgttgcagatccggaagcatgggtatttcggtgactta-gattttatcatattattt 31202  T

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Target: scaffold0049 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 4 - 159
Target Start/End: Complemental strand, 71419 - 71263
Alignment:
Q  4 tcgtttaagtgcggcgttttgttgttcgtcgtcttgtgc-gcgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatca 102  Q
    |||| |||| |||||||| ||||||| |||| ||||||| ||  || |||||||||||||||| |||||| ||||||||||||||  ||||||  |||||    
T  71419 tcgtctaagggcggcgttgtgttgttagtcgacttgtgcagcagttgatttcgcgtcttgtcgtggtgttcgtttagttcctatttaaagatcggcatca 71320  T
Q  103 gtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatg 159  Q
    |||||||  |||||||| |||| ||| ||| | ||||||||||||||| ||||||||    
T  71319 gtcaattataaattcaatcaatgattggggtgtcaacgttgcagatccggaagcatg 71263  T

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Target: scaffold0603 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 159
Target Start/End: Original strand, 7693 - 7842
Alignment:
Q  11 agtgcggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaatt 109  Q
    ||||||||||| ||||||| ||||||||||| | ||||| | |||||||||||  || ||||| |||   || |||||| |||||| || ||||||||||    
T  7693 agtgcggcgttgtgttgtttgtcgtcttgtgtggcgtttgaattcgcgtcttgatgcagtgttcgttagttttctattgaaagatccacttcagtcaatt 7792  T
Q  110 gcaaattcaaccaattatttgggcggcaacgttgcagatccagaagcatg 159  Q
      |||||| | |||||||||||| | | |||||||| |||| ||||||||    
T  7793 ataaattccatcaattatttgggtgtcgacgttgcatatccggaagcatg 7842  T

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Target: scaffold0154 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 51 - 200
Target Start/End: Original strand, 25308 - 25456
Alignment:
Q  51 tttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatcc 150  Q
    |||||| ||||||||||||||  ||||||||| | ||| || ||  |||||||| |||| |||||| || |||| ||||| ||| |||| ||| ||||||    
T  25308 tttcgcatcttgtcgcggtgtccgtttagttcatgttgaaatattgacatcagttaattacaaattaaatcaatgatttgagcgtcaacattgtagatcc 25407  T
Q  151 agaagcatgaaaatttcagtgacttaggcttttatcatattatttgtaga 200  Q
    | || |||||  ||||| |||||||| | ||| |||||||||||||||||    
T  25408 aaaaacatgagtatttctgtgactta-gatttgatcatattatttgtaga 25456  T

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Target: scaffold0128 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 36812 - 36990
Alignment:
Q  16 ggcgttttgttgttcgtcgtcttgtgcg-cgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaa 114  Q
    |||||| ||||| | ||||||||||||| ||||| ||||||||| || |  |||||||| ||||||||     | || ||  |||| ||| |||| ||||    
T  36812 ggcgttgtgttggtagtcgtcttgtgcggcgtttgatttcgcgttttatttcggtgtttttttagttc-----gaaatattgacattagttaattacaaa 36906  T
Q  115 ttcaaccaattatttgggcggcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 199  Q
    ||||| |||| ||||||||| ||| |||||  |||  ||||||||   |||||||||| ||||  ||||||||||||||||||||    
T  36907 ttcaatcaatgatttgggcgtcaatgttgctaatctggaagcatgggtatttcagtgatttaga-ttttatcatattatttgtag 36990  T

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Target: scaffold0042 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 159
Target Start/End: Complemental strand, 92573 - 92459
Alignment:
Q  45 gtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgc 144  Q
    |||| ||||| |||||||| | |||||| |||| |||| ||||| |||||| |  | ||| |||  || |||||| |||| |||||| || ||||||||     
T  92573 gtttgatttcacgtcttgttgtggtgttcgtttggttcatattgaaagatcaattttagtaaatcacagattcaatcaatgatttggacgtcaacgttgt 92474  T
Q  145 agatccagaagcatg 159  Q
    |||||||||||||||    
T  92473 agatccagaagcatg 92459  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 160
Target Start/End: Complemental strand, 58160 - 58050
Alignment:
Q  50 atttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattgcaaattcaaccaattatttgggcggcaacgttgcagatc 149  Q
    |||| ||||||||| |||||||||||||  ||| || || ||||||  | |||||||||  || |||||| | || |||||| || |||| |||||||||    
T  58160 attttgcgtcttgttgcggtgtttgtttgtttcatactgaaagatcagcttcagtcaatcacagattcaatcgatgatttggacgtcaacattgcagatc 58061  T
Q  150 cagaagcatga 160  Q
    | |||||||||    
T  58060 cggaagcatga 58050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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