View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12750_low_13 (Length: 340)

Name: NF12750_low_13
Description: NF12750
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12750_low_13
NF12750_low_13
[»] chr6 (25 HSPs)
chr6 (1-325)||(17584823-17585147)
chr6 (154-238)||(32521881-32521965)
chr6 (99-237)||(12767552-12767686)
chr6 (91-240)||(30461427-30461572)
chr6 (132-237)||(2092283-2092384)
chr6 (97-237)||(12409405-12409541)
chr6 (130-238)||(21802549-21802653)
chr6 (183-238)||(31282190-31282245)
chr6 (147-213)||(33275791-33275858)
chr6 (155-238)||(32114352-32114435)
chr6 (183-237)||(3751958-3752012)
chr6 (130-235)||(7448254-7448354)
chr6 (154-238)||(31882454-31882538)
chr6 (162-237)||(28494161-28494236)
chr6 (162-237)||(29806570-29806645)
chr6 (183-238)||(33950831-33950886)
chr6 (194-236)||(3767160-3767202)
chr6 (194-236)||(9241476-9241518)
chr6 (194-236)||(12025613-12025655)
chr6 (96-235)||(14313183-14313318)
chr6 (96-238)||(21847314-21847450)
chr6 (93-154)||(22268499-22268560)
chr6 (195-236)||(25528352-25528393)
chr6 (183-239)||(6937848-6937904)
chr6 (183-238)||(15499440-15499496)
[»] chr5 (31 HSPs)
chr5 (99-238)||(12585598-12585738)
chr5 (130-240)||(19500787-19500898)
chr5 (98-238)||(13279473-13279609)
chr5 (130-236)||(3933925-3934027)
chr5 (154-238)||(14594115-14594199)
chr5 (130-237)||(36762140-36762243)
chr5 (97-235)||(6029447-6029581)
chr5 (154-238)||(4876756-4876840)
chr5 (130-238)||(20183958-20184062)
chr5 (186-240)||(141561-141615)
chr5 (132-238)||(31476386-31476488)
chr5 (130-238)||(8573293-8573397)
chr5 (130-238)||(27979257-27979361)
chr5 (99-235)||(31601491-31601623)
chr5 (130-238)||(36737393-36737497)
chr5 (155-238)||(40026975-40027058)
chr5 (98-236)||(1406182-1406316)
chr5 (96-238)||(15175816-15175954)
chr5 (154-238)||(5138909-5138993)
chr5 (183-235)||(19409152-19409204)
chr5 (154-238)||(20570204-20570288)
chr5 (154-238)||(36742167-36742251)
chr5 (162-245)||(38955497-38955581)
chr5 (194-236)||(20691211-20691253)
chr5 (97-154)||(2074739-2074796)
chr5 (183-232)||(18338138-18338187)
chr5 (127-205)||(31886358-31886432)
chr5 (193-238)||(40956840-40956885)
chr5 (185-237)||(6123871-6123923)
chr5 (127-170)||(15175331-15175375)
chr5 (194-238)||(24624913-24624957)
[»] chr3 (27 HSPs)
chr3 (99-238)||(49765073-49765208)
chr3 (99-236)||(11397584-11397717)
chr3 (130-236)||(54403587-54403689)
chr3 (97-238)||(40036340-40036477)
chr3 (130-248)||(1262425-1262540)
chr3 (99-233)||(13623172-13623301)
chr3 (99-237)||(25480524-25480658)
chr3 (154-238)||(27394299-27394383)
chr3 (147-235)||(48841970-48842058)
chr3 (183-245)||(6296681-6296744)
chr3 (130-238)||(14600405-14600509)
chr3 (94-238)||(48223552-48223692)
chr3 (156-234)||(3541032-3541110)
chr3 (194-236)||(11056494-11056536)
chr3 (183-237)||(30127669-30127723)
chr3 (194-236)||(37183697-37183739)
chr3 (154-238)||(17764905-17764990)
chr3 (154-238)||(19066225-19066310)
chr3 (195-236)||(41865075-41865116)
chr3 (130-240)||(44499986-44500091)
chr3 (98-154)||(1263083-1263139)
chr3 (89-153)||(5984934-5984998)
chr3 (130-238)||(27255313-27255418)
chr3 (132-237)||(30605291-30605392)
chr3 (186-238)||(33978635-33978687)
chr3 (183-238)||(49080034-49080090)
chr3 (122-154)||(54404152-54404184)
[»] chr2 (31 HSPs)
chr2 (98-238)||(31709055-31709196)
chr2 (98-237)||(22298196-22298331)
chr2 (130-238)||(11796755-11796858)
chr2 (132-238)||(34173658-34173760)
chr2 (130-238)||(5790035-5790137)
chr2 (130-207)||(5475109-5475182)
chr2 (132-240)||(37199542-37199646)
chr2 (153-235)||(3045546-3045628)
chr2 (184-240)||(41077569-41077625)
chr2 (183-238)||(31597299-31597354)
chr2 (130-238)||(33146060-33146164)
chr2 (154-241)||(37009601-37009688)
chr2 (155-238)||(43439743-43439826)
chr2 (184-238)||(4437923-4437977)
chr2 (167-237)||(40020157-40020227)
chr2 (132-238)||(28167567-28167669)
chr2 (130-235)||(7939352-7939453)
chr2 (183-238)||(17829663-17829718)
chr2 (183-238)||(37329774-37329829)
chr2 (194-236)||(551923-551965)
chr2 (154-240)||(11564411-11564497)
chr2 (194-240)||(11942100-11942146)
chr2 (194-236)||(16110580-16110622)
chr2 (194-236)||(20893305-20893347)
chr2 (130-241)||(22606924-22607031)
chr2 (132-235)||(40769318-40769416)
chr2 (162-238)||(32023023-32023100)
chr2 (156-236)||(13873932-13874012)
chr2 (156-236)||(14014057-14014137)
chr2 (97-149)||(37198921-37198973)
chr2 (194-245)||(43657517-43657569)
[»] chr1 (25 HSPs)
chr1 (127-240)||(49129618-49129727)
chr1 (98-238)||(45737298-45737434)
chr1 (99-238)||(27225670-27225805)
chr1 (91-235)||(45737986-45738126)
chr1 (119-237)||(10012397-10012511)
chr1 (132-237)||(1114828-1114929)
chr1 (97-232)||(16536364-16536495)
chr1 (154-240)||(28198066-28198152)
chr1 (157-238)||(33126798-33126879)
chr1 (132-207)||(4667518-4667594)
chr1 (98-238)||(25990422-25990558)
chr1 (97-233)||(36604719-36604851)
chr1 (92-154)||(9998023-9998085)
chr1 (96-238)||(7307524-7307664)
chr1 (130-236)||(18406555-18406657)
chr1 (132-238)||(19071739-19071840)
chr1 (132-238)||(19119629-19119730)
chr1 (99-236)||(50143379-50143512)
chr1 (183-238)||(27930843-27930898)
chr1 (186-237)||(29777950-29778001)
chr1 (155-238)||(44648666-44648749)
chr1 (183-233)||(25087375-25087425)
chr1 (155-237)||(36512004-36512086)
chr1 (98-154)||(1846564-1846620)
chr1 (194-238)||(51612411-51612455)
[»] chr4 (28 HSPs)
chr4 (122-237)||(21037316-21037427)
chr4 (96-238)||(51019643-51019781)
chr4 (130-235)||(6711258-6711359)
chr4 (98-238)||(23721996-23722132)
chr4 (156-235)||(35666000-35666079)
chr4 (131-245)||(32448877-32448988)
chr4 (130-237)||(37424393-37424495)
chr4 (157-245)||(7479917-7480005)
chr4 (98-212)||(8138316-8138426)
chr4 (157-238)||(49702987-49703068)
chr4 (130-235)||(25010005-25010106)
chr4 (154-238)||(33046606-33046690)
chr4 (154-238)||(50825230-50825314)
chr4 (162-238)||(54092783-54092859)
chr4 (132-240)||(4949962-4950066)
chr4 (130-238)||(16192260-16192364)
chr4 (99-238)||(20544963-20545098)
chr4 (193-245)||(4963982-4964035)
chr4 (97-235)||(7797561-7797695)
chr4 (194-245)||(796910-796962)
chr4 (194-245)||(26705120-26705171)
chr4 (200-245)||(6232524-6232570)
chr4 (194-236)||(23265721-23265763)
chr4 (135-233)||(17723369-17723463)
chr4 (154-231)||(44664752-44664829)
chr4 (194-245)||(12250770-12250822)
chr4 (194-238)||(19313431-19313475)
chr4 (186-238)||(46076426-46076478)
[»] chr8 (36 HSPs)
chr8 (132-245)||(17564698-17564807)
chr8 (98-223)||(44284310-44284431)
chr8 (130-235)||(34363939-34364039)
chr8 (155-235)||(8443273-8443353)
chr8 (98-233)||(32903609-32903741)
chr8 (132-235)||(14879550-14879649)
chr8 (99-240)||(34925348-34925490)
chr8 (96-237)||(43776941-43777078)
chr8 (135-238)||(24809616-24809716)
chr8 (154-233)||(41262122-41262201)
chr8 (156-238)||(11760012-11760094)
chr8 (186-240)||(39998978-39999032)
chr8 (94-238)||(30354472-30354617)
chr8 (183-236)||(31740096-31740149)
chr8 (130-236)||(36016707-36016808)
chr8 (145-238)||(37872812-37872905)
chr8 (194-238)||(11141006-11141050)
chr8 (184-240)||(13439557-13439612)
chr8 (154-245)||(37266079-37266171)
chr8 (154-238)||(40791094-40791178)
chr8 (183-234)||(4257210-4257261)
chr8 (153-240)||(17734855-17734941)
chr8 (130-238)||(37836947-37837051)
chr8 (135-238)||(3940162-3940261)
chr8 (194-236)||(6293132-6293174)
chr8 (194-236)||(14364396-14364438)
chr8 (98-156)||(40134143-40134201)
chr8 (154-238)||(253571-253656)
chr8 (154-238)||(662202-662287)
chr8 (154-238)||(848000-848085)
chr8 (162-238)||(17496315-17496392)
chr8 (188-237)||(21304579-21304628)
chr8 (97-154)||(29636411-29636468)
chr8 (127-156)||(42198563-42198592)
chr8 (153-238)||(44746221-44746306)
chr8 (98-154)||(14880213-14880269)
[»] chr7 (30 HSPs)
chr7 (102-237)||(3391755-3391886)
chr7 (130-237)||(40401497-40401600)
chr7 (149-238)||(5227893-5227982)
chr7 (156-240)||(23232912-23232996)
chr7 (95-238)||(16425954-16426093)
chr7 (96-235)||(22711626-22711761)
chr7 (130-241)||(27619575-27619682)
chr7 (132-214)||(36688828-36688906)
chr7 (153-238)||(42813067-42813152)
chr7 (183-235)||(48872086-48872138)
chr7 (157-236)||(11696258-11696337)
chr7 (130-238)||(38790098-38790202)
chr7 (183-245)||(26200415-26200477)
chr7 (162-236)||(26902711-26902785)
chr7 (183-240)||(33869890-33869947)
chr7 (100-238)||(46011064-46011198)
chr7 (194-245)||(2146800-2146852)
chr7 (130-210)||(11639922-11639998)
chr7 (130-238)||(29615542-29615646)
chr7 (151-238)||(32387523-32387610)
chr7 (130-238)||(38987778-38987882)
chr7 (162-230)||(23727822-23727887)
chr7 (130-213)||(29736157-29736236)
chr7 (194-236)||(40344374-40344416)
chr7 (154-235)||(8123225-8123305)
chr7 (185-238)||(19332995-19333048)
chr7 (156-237)||(45941500-45941581)
chr7 (194-245)||(29823956-29824008)
chr7 (186-238)||(34834894-34834946)
chr7 (155-235)||(36848445-36848525)
[»] scaffold0159 (1 HSPs)
scaffold0159 (130-238)||(34408-34510)
[»] scaffold0068 (1 HSPs)
scaffold0068 (130-238)||(59286-59390)
[»] scaffold0289 (1 HSPs)
scaffold0289 (130-241)||(3990-4096)
[»] scaffold0003 (2 HSPs)
scaffold0003 (95-238)||(14667-14806)
scaffold0003 (95-238)||(28813-28952)
[»] scaffold0043 (1 HSPs)
scaffold0043 (119-229)||(67730-67836)
[»] scaffold0971 (1 HSPs)
scaffold0971 (183-240)||(3174-3231)
[»] scaffold0189 (1 HSPs)
scaffold0189 (154-238)||(11335-11419)
[»] scaffold0004 (1 HSPs)
scaffold0004 (156-236)||(351316-351396)
[»] scaffold0051 (1 HSPs)
scaffold0051 (185-240)||(11573-11627)
[»] scaffold0067 (1 HSPs)
scaffold0067 (194-236)||(18679-18721)
[»] scaffold0036 (1 HSPs)
scaffold0036 (183-223)||(25295-25335)


Alignment Details
Target: chr6 (Bit Score: 261; Significance: 1e-145; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 1 - 325
Target Start/End: Original strand, 17584823 - 17585147
Alignment:
Q  1 tgtagcaccaacacttcacattgaaggcatctcgagtatctgaaaggtgtcggtaacattgacaaatatggttacataacttacaatcaaatatttaaga 100  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  17584823 tgtagcaccaacacttcacattgaaggcatctcgagtgtttgaaaggtgtcggtaacattgacaaatatggttacataacttacattcaaatatttaaga 17584922  T
Q  101 gtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatt 200  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17584923 gtaaattacatttctctaccctaagagaagcttgaattacactcccctcccctccctcttgtgttaaaatatacatttttcccccttgaaaggtaaaatt 17585022  T
Q  201 tatactcccctcccgtatgagatacttgaattacaacctctccctgaaagggaaagattggacggttggtttgttttgaatcggannnnnnnngtttgag 300  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||        |||||||    
T  17585023 tatactcccctcccttatgagatatttgaattacaacctctccctgaaagggaaagattggatggttggtttgtttttaatcggattttttttgtttgag 17585122  T
Q  301 tttgaatttggtttcagttcttctt 325  Q
    ||||||||||||||||||| |||||    
T  17585123 tttgaatttggtttcagttattctt 17585147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 154 - 238
Target Start/End: Original strand, 32521881 - 32521965
Alignment:
Q  154 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    ||||||| ||||||||||||||||  || || |||||| ||||||||||||||||| |||| ||| |||||||||||||||||||    
T  32521881 ccctcttatgttaaaatatacattcatttcctttgaaaagtaaaatttatactcccttcccctataagatacttgaattacaacc 32521965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 99 - 237
Target Start/End: Complemental strand, 12767686 - 12767552
Alignment:
Q  99 gagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaa 198  Q
    |||||||||||| | | ||  |||||| ||||||||||||||||||||||||    |||||| |||||||||||||| ||    |||||||||  |||||    
T  12767686 gagtaaattacactcccctctcctaagagaagcttgaattacactcccctcc----cctcttatgttaaaatatacacttccctcccttgaaaaataaaa 12767591  T
Q  199 tttatactcccctcccgtatgagatacttgaattacaac 237  Q
    ||||||||| |||||| ||  |||| |||||||||||||    
T  12767590 tttatactctcctcccttaaaagatgcttgaattacaac 12767552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 91 - 240
Target Start/End: Original strand, 30461427 - 30461572
Alignment:
Q  91 atatttaagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaa 190  Q
    ||||| |||||||||| ||| ||| || |||| |  || |||||| ||||||| ||||||||||    || |||||||||||||| || |  ||||||||    
T  30461427 atattgaagagtaaataacacttccctcccctcaaagatgcttgatttacacttccctcccctc----ttatgttaaaatatacacttctctcccttgaa 30461522  T
Q  191 aggtaaaatttatactcccctcccgtatgagatacttgaattacaacctc 240  Q
    | |||| || ||||||||| |||| ||| |||||||||||||||||||||    
T  30461523 aagtaatatgtatactcccttcccttataagatacttgaattacaacctc 30461572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 132 - 237
Target Start/End: Complemental strand, 2092384 - 2092283
Alignment:
Q  132 ttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaat 231  Q
    |||||||||||||||||||||||    || | |||||||||||| ||    ||||||||| |||||||||||||||||||||| ||| |||  |||||||    
T  2092384 ttgaattacactcccctcccctc----ttatattaaaatatacacttccatcccttgaaaagtaaaatttatactcccctcccctataagaagcttgaat 2092289  T
Q  232 tacaac 237  Q
    ||||||    
T  2092288 tacaac 2092283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 237
Target Start/End: Original strand, 12409405 - 12409541
Alignment:
Q  97 aagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaa 196  Q
    |||||||||||||| | | || ||||||| ||||||||||| |||||||||||||||||    | |||||||||||||| | |   || |||||| ||||    
T  12409405 aagagtaaattacactcccctcccctaagagaagcttgaatcacactcccctcccctcc----tatgttaaaatatacactctcctccattgaaaagtaa 12409500  T
Q  197 aatttatactcccctcccgtatgagatacttgaattacaac 237  Q
    ||||||||||  | |||| |||||||| ||| |||| ||||    
T  12409501 aatttatacttacatcccttatgagatgcttaaattgcaac 12409541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 21802653 - 21802549
Alignment:
Q  130 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 229  Q
    ||||||||||||||| |||||||||    || |||||||||||||| |     ||||||||| |||||||||||||||||||||  ||| |||| |||||    
T  21802653 gcttgaattacactctcctcccctc----ttatgttaaaatatacactcccctcccttgaaaagtaaaatttatactcccctcctctataagatgcttga 21802558  T
Q  230 attacaacc 238  Q
    |||||||||    
T  21802557 attacaacc 21802549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 238
Target Start/End: Complemental strand, 31282245 - 31282190
Alignment:
Q  183 cccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    ||||||||| |||||||||||||||||||||||||| |||| ||||||||| ||||    
T  31282245 cccttgaaaagtaaaatttatactcccctcccgtataagatgcttgaattataacc 31282190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 213
Target Start/End: Original strand, 33275791 - 33275858
Alignment:
Q  147 ctcccctcc-ctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcc 213  Q
    ||||||||| ||||| |||||||||||||||||||  ||||||||| |||||||||||| ||||||||    
T  33275791 ctcccctcctctcttatgttaaaatatacatttttctcccttgaaaagtaaaatttatagtcccctcc 33275858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 238
Target Start/End: Complemental strand, 32114435 - 32114352
Alignment:
Q  155 cctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    |||||| |||||||||||||| |  |  ||||||||| ||||||| ||||||||| |||| ||| |||| ||||||||||||||    
T  32114435 cctcttatgttaaaatatacactcctctcccttgaaaagtaaaatgtatactcccttcccttataagatgcttgaattacaacc 32114352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 237
Target Start/End: Original strand, 3751958 - 3752012
Alignment:
Q  183 cccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaac 237  Q
    ||||||||| | |||||||||||||||||||| ||| |||| |||||||||||||    
T  3751958 cccttgaaaagaaaaatttatactcccctcccctataagatgcttgaattacaac 3752012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 235
Target Start/End: Original strand, 7448254 - 7448354
Alignment:
Q  130 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 229  Q
    ||||||||||||||| |||    || ||||| ||||||||||||||||||   |||||||||  ||||| ||||||||||||||| ||| | || |||||    
T  7448254 gcttgaattacactctcct----tctctcttatgttaaaatatacattttcctcccttgaaaa-taaaagttatactcccctcccctataaaatgcttga 7448348  T
Q  230 attaca 235  Q
    ||||||    
T  7448349 attaca 7448354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 238
Target Start/End: Complemental strand, 31882538 - 31882454
Alignment:
Q  154 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    |||||||||||| ||||||||| || |  |||||||||  ||||| ||||||||   |||| ||| |||||||||||||||||||    
T  31882538 ccctcttgtgttcaaatatacacttctctcccttgaaaaataaaagttatactcttatcccctataagatacttgaattacaacc 31882454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 162 - 237
Target Start/End: Original strand, 28494161 - 28494236
Alignment:
Q  162 tgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaac 237  Q
    |||||||||||||||  |   ||||||||| ||||||||||||||| | |||| ||| |||| |||||||||||||    
T  28494161 tgttaaaatatacatcctcctcccttgaaaagtaaaatttatactctcatcccctataagatgcttgaattacaac 28494236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 162 - 237
Target Start/End: Original strand, 29806570 - 29806645
Alignment:
Q  162 tgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaac 237  Q
    |||||||||||||||  |   ||||||||| ||||||||||||||| | |||| ||| |||| |||||||||||||    
T  29806570 tgttaaaatatacatcctcctcccttgaaaagtaaaatttatactctcatcccctataagatgcttgaattacaac 29806645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 183 - 238
Target Start/End: Complemental strand, 33950886 - 33950831
Alignment:
Q  183 cccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    |||||||||  ||||||| ||||||||||||| ||| |||| ||||||||||||||    
T  33950886 cccttgaaaaataaaattaatactcccctcccctataagatgcttgaattacaacc 33950831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 236
Target Start/End: Original strand, 3767160 - 3767202
Alignment:
Q  194 taaaatttatactcccctcccgtatgagatacttgaattacaa 236  Q
    |||||||||||||| |||||| ||| |||||||||||||||||    
T  3767160 taaaatttatactctcctcccttataagatacttgaattacaa 3767202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 9241518 - 9241476
Alignment:
Q  194 taaaatttatactcccctcccgtatgagatacttgaattacaa 236  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||    
T  9241518 taaaatttatactcccctcccttataagatgcttgaattacaa 9241476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 236
Target Start/End: Original strand, 12025613 - 12025655
Alignment:
Q  194 taaaatttatactcccctcccgtatgagatacttgaattacaa 236  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||    
T  12025613 taaaatttatactcccctcccttataagatgcttgaattacaa 12025655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 235
Target Start/End: Original strand, 14313183 - 14313318
Alignment:
Q  96 taagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggta 195  Q
    ||||||||||||||| | | || |||| |  || |||||||||||| ||| |||||||     || |||||||||||||| ||    |||||||||  ||    
T  14313183 taagagtaaattacactcccctcccctcaaagatgcttgaattacattcctctcccctt----ttatgttaaaatatacacttccctcccttgaaaaata 14313278  T
Q  196 aaatttatactcccctcccgtatgagatacttgaattaca 235  Q
    ||||||| ||||||||||| ||| |||| |||||||||||    
T  14313279 aaatttacactcccctcccctataagatgcttgaattaca 14313318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 238
Target Start/End: Complemental strand, 21847450 - 21847314
Alignment:
Q  96 taagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggta 195  Q
    ||||||||||||||||| | || |  ||||  |||||||||||| |||| |||||||||    || |||||||||||||| ||    || ||| || |||    
T  21847450 taagagtaaattacattccccttc--taagaaaagcttgaattagactctcctcccctc----ttatgttaaaatatacacttccctcctttgcaaagta 21847357  T
Q  196 aaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    ||||||||||||||||||| || |||||  ||||||| |||||    
T  21847356 aaatttatactcccctcccttaagagatgtttgaattgcaacc 21847314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 154
Target Start/End: Original strand, 22268499 - 22268560
Alignment:
Q  93 atttaagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctc 154  Q
    ||||||||||| |||||| ||| || |||| |  |||||||||||||||||| |||||||||    
T  22268499 atttaagagtacattacacttcccttccctcaaagaagcttgaattacactctcctcccctc 22268560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 25528393 - 25528352
Alignment:
Q  195 aaaatttatactcccctcccgtatgagatacttgaattacaa 236  Q
    |||||||||||||||||||| ||| |||| ||||||||||||    
T  25528393 aaaatttatactcccctcccttataagatgcttgaattacaa 25528352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 6937904 - 6937848
Alignment:
Q  183 cccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacct 239  Q
    ||||||||| |||||||||||||| | ||| | ||| |||| |||||||||||||||    
T  6937904 cccttgaaaagtaaaatttatactacactctcttataagatgcttgaattacaacct 6937848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 238
Target Start/End: Complemental strand, 15499496 - 15499440
Alignment:
Q  183 cccttgaaaggtaaaatttatactcccc-tcccgtatgagatacttgaattacaacc 238  Q
    ||||||||| |||| ||||||||||||| |||| ||| |||| ||||||||||||||    
T  15499496 cccttgaaaagtaagatttatactccccatcccctataagatgcttgaattacaacc 15499440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 6e-31; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 99 - 238
Target Start/End: Original strand, 12585598 - 12585738
Alignment:
Q  99 gagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccc-tcttgtgttaaaatatacattttttccccttgaaaggtaaa 197  Q
    |||||||||||| ||| || ||||||| || ||||||||||||||||||||||||||| |||| |||||||||||||| |||   ||||||||| |||||    
T  12585598 gagtaaattacacttccctcccctaagagatgcttgaattacactcccctcccctcccctcttatgttaaaatatacactttcctcccttgaaaagtaaa 12585697  T
Q  198 atttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    |||||||||||||| || | |||||| |||||||| |||||    
T  12585698 atttatactccccttccctttgagatgcttgaattgcaacc 12585738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 19500787 - 19500898
Alignment:
Q  130 gcttgaattacactcccctcccctccct-cttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttg 228  Q
    |||||||||||||| |||||| |||||| ||| |||||||||||||| |  |  |||||| || |||||||||||||||||||||| ||| ||||| |||    
T  19500787 gcttgaattacacttccctcctctcccttcttatgttaaaatatacactcctctcccttgcaaagtaaaatttatactcccctcccctataagatatttg 19500886  T
Q  229 aattacaacctc 240  Q
    ||||||||||||    
T  19500887 aattacaacctc 19500898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 238
Target Start/End: Original strand, 13279473 - 13279609
Alignment:
Q  98 agagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaa 197  Q
    ||||||||||||| | | || | ||||| ||||||||||||||||| |||||| |||    || ||||||||| |||||| |   ||||||||| |||||    
T  13279473 agagtaaattacactcccctcctctaagagaagcttgaattacacttccctcctctc----ttatgttaaaatctacattctcctcccttgaaaagtaaa 13279568  T
Q  198 atttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    ||||||||||||||||| ||  |||| ||||||||||||||    
T  13279569 atttatactcccctcccttaaaagatgcttgaattacaacc 13279609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 236
Target Start/End: Complemental strand, 3934027 - 3933925
Alignment:
Q  130 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 229  Q
    |||||||||||||| ||||||||||    || |||||||||||||||||     |||||||| |||||||||||||||||||||| ||| |||| |||||    
T  3934027 gcttgaattacacttccctcccctc----ttatgttaaaatatacatttcccttccttgaaaagtaaaatttatactcccctcccttataagatgcttga 3933932  T
Q  230 attacaa 236  Q
    |||||||    
T  3933931 attacaa 3933925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 154 - 238
Target Start/End: Original strand, 14594115 - 14594199
Alignment:
Q  154 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    ||||||| |||||||||||||| ||    ||||||||| |||||||||||||||||||||| ||| |||| ||||||||||||||    
T  14594115 ccctcttatgttaaaatatacacttccctcccttgaaaagtaaaatttatactcccctcccttataagatgcttgaattacaacc 14594199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 130 - 237
Target Start/End: Original strand, 36762140 - 36762243
Alignment:
Q  130 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 229  Q
    |||||||||||||||||||||||||    || | |||||||||||| ||    ||||||||| |||||||||||| ||||||||| ||| |||| |||||    
T  36762140 gcttgaattacactcccctcccctc----ttattttaaaatatacacttccctcccttgaaaagtaaaatttatattcccctcccttataagatgcttga 36762235  T
Q  230 attacaac 237  Q
    ||||||||    
T  36762236 attacaac 36762243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 97 - 235
Target Start/End: Original strand, 6029447 - 6029581
Alignment:
Q  97 aagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaa 196  Q
    |||||||||||||| ||| || |||| |  || ||||||||||||||| | ||| |||    || ||||||||||||||||||   ||||| ||| ||||    
T  6029447 aagagtaaattacacttccctcccctcaaagatgcttgaattacactctcatcctctc----ttatgttaaaatatacattttcctcccttaaaaagtaa 6029542  T
Q  197 aatttatactcccctcccgtatgagatacttgaattaca 235  Q
    |||||||| ||||||||| ||| |||| |||||||||||    
T  6029543 aatttatattcccctcccctataagatgcttgaattaca 6029581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 154 - 238
Target Start/End: Original strand, 4876756 - 4876840
Alignment:
Q  154 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    ||||||| |||||||||||||||| |   |||||||||  ||||||||||| ||||||||| ||| |||| ||||||||||||||    
T  4876756 ccctcttatgttaaaatatacattctcctcccttgaaaaataaaatttataatcccctcccttataagatgcttgaattacaacc 4876840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 20184062 - 20183958
Alignment:
Q  130 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 229  Q
    |||||||||||||||||||||||||    || ||||| |||||||| ||    |||||||||  ||||||||||||||||||||| ||| |||| |||||    
T  20184062 gcttgaattacactcccctcccctc----ttatgttacaatatacacttccctcccttgaaaactaaaatttatactcccctcccctataagatgcttga 20183967  T
Q  230 attacaacc 238  Q
    ||| |||||    
T  20183966 attccaacc 20183958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 141615 - 141561
Alignment:
Q  186 ttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacctc 240  Q
    |||||| |||||||||||||||||||||| |||||||| |||||||||| |||||    
T  141615 ttgaaaagtaaaatttatactcccctcccctatgagatgcttgaattactacctc 141561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 238
Target Start/End: Original strand, 31476386 - 31476488
Alignment:
Q  132 ttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaat 231  Q
    |||||||| ||||||||||||||    || |||||||||||||||| |   ||| ||||| ||||||||||||||||| | || ||| |||| |||||||    
T  31476386 ttgaattagactcccctcccctc----ttatgttaaaatatacattctcctcccatgaaaagtaaaatttatactccctttccctataagatgcttgaat 31476481  T
Q  232 tacaacc 238  Q
    |||||||    
T  31476482 tacaacc 31476488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 8573397 - 8573293
Alignment:
Q  130 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 229  Q
    ||||||||||||||| |||    |||||||| |||||||||||||| |     || |||||| |||||||||| ||||||||||| ||| |||| |||||    
T  8573397 gcttgaattacactctcct----tccctcttatgttaaaatatacactcccctcctttgaaaagtaaaatttacactcccctcccctataagatgcttga 8573302  T
Q  230 attacaacc 238  Q
    |||||||||    
T  8573301 attacaacc 8573293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 27979257 - 27979361
Alignment:
Q  130 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 229  Q
    ||||||||||||||||||||    ||||||| ||||||||||||||||     ||||||||| |||||||| ||||||| ||||| ||| |||| ||| |    
T  27979257 gcttgaattacactcccctc----ccctcttatgttaaaatatacattcccctcccttgaaaagtaaaattaatactcctctcccttataagatgcttaa 27979352  T
Q  230 attacaacc 238  Q
     ||||||||    
T  27979353 cttacaacc 27979361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 235
Target Start/End: Complemental strand, 31601623 - 31601491
Alignment:
Q  99 gagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaa 198  Q
    |||||||||||| ||| || |||| |  || ||||||||||||||||||||||||     || | |||||||||| |||| |  || || ||| ||||||    
T  31601623 gagtaaattacacttccctccccttaaagatgcttgaattacactcccctcccctt----ttatattaaaatatatatttctctcctttaaaaagtaaaa 31601528  T
Q  199 tttatactcccctcccgtatgagatacttgaattaca 235  Q
    |||||| ||||||||| ||| |||| |||||||||||    
T  31601527 tttatattcccctcccctataagatgcttgaattaca 31601491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 36737497 - 36737393
Alignment:
Q  130 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 229  Q
    |||||||||||||||||||||    |||||| |||||||||||||| ||    |||||||||  ||||||| ||| ||||||||| ||| ||||  ||||    
T  36737497 gcttgaattacactcccctcc----cctcttatgttaaaatatacacttccctcccttgaaaaataaaattaatattcccctcccctataagatgattga 36737402  T
Q  230 attacaacc 238  Q
    |||||||||    
T  36737401 attacaacc 36737393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 238
Target Start/End: Original strand, 40026975 - 40027058
Alignment:
Q  155 cctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    |||||| |||||||||||||| |||   ||||||||| | |||| ||||||||||||||| ||  |||| ||||||||||||||    
T  40026975 cctcttatgttaaaatatacactttcatcccttgaaaagaaaaaattatactcccctcccctagaagatgcttgaattacaacc 40027058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 236
Target Start/End: Complemental strand, 1406316 - 1406182
Alignment:
Q  98 agagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaa 197  Q
    ||||||||||||| | | || | ||||| |||||||||||||||||| | || ||||    || |||||||||||||| | |   || ||||||  ||||    
T  1406316 agagtaaattacactccccttctctaagagaagcttgaattacactctcatctcctc----ttatgttaaaatatacactctcctccattgaaaaataaa 1406221  T
Q  198 atttatactcccctcccgtatgagatacttgaattacaa 236  Q
    ||||||||||||||| | ||| |||| ||||||||||||    
T  1406220 atttatactcccctcgcctataagatgcttgaattacaa 1406182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 96 - 238
Target Start/End: Complemental strand, 15175954 - 15175816
Alignment:
Q  96 taagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggta 195  Q
    ||||||||||||||| | | || ||||||| || ||||||||||||||||||||    || |||| ||||||||||||||  | |  | ||||||| |||    
T  15175954 taagagtaaattacactcccctcccctaagagatgcttgaattacactcccctc----ccttcttatgttaaaatatacacatctctctcttgaaaagta 15175859  T
Q  196 aaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    |||| ||||||||  |||| | | |||| |||||||| |||||    
T  15175858 aaatctatactcctatcccctttcagatgcttgaattgcaacc 15175816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 238
Target Start/End: Complemental strand, 5138993 - 5138909
Alignment:
Q  154 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    ||||||| |||||||||||||| | |   |||| ||||  ||||||||||||||| ||||| ||| |||| ||||||||||||||    
T  5138993 ccctcttatgttaaaatatacactctcctccctcgaaaaataaaatttatactccactcccctataagatgcttgaattacaacc 5138909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 19409204 - 19409152
Alignment:
Q  183 cccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattaca 235  Q
    ||||||||| |||||||||||||||||||||| ||| |||| ||| |||||||    
T  19409204 cccttgaaaagtaaaatttatactcccctcccctataagatgcttaaattaca 19409152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 238
Target Start/End: Original strand, 20570204 - 20570288
Alignment:
Q  154 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    ||||||| ||||||||||||||||     |||||||||  ||||||| ||||||||||| | ||| |||| ||||||||||||||    
T  20570204 ccctcttatgttaaaatatacattcccctcccttgaaaaataaaattaatactcccctctcctataagatgcttgaattacaacc 20570288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 238
Target Start/End: Original strand, 36742167 - 36742251
Alignment:
Q  154 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    ||||||| |||||||||||||| |     |||||||||  ||||||||| ||||||||||| ||| |||| ||||||||||||||    
T  36742167 ccctcttatgttaaaatatacactaccctcccttgaaaaataaaatttacactcccctcccttataagatgcttgaattacaacc 36742251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 245
Target Start/End: Complemental strand, 38955581 - 38955497
Alignment:
Q  162 tgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaac-ctctccct 245  Q
    ||||||||||||||||  |  ||||||||| ||||||||||||||||| ||||  || ||||  |||||||||||| ||||||||    
T  38955581 tgttaaaatatacattcctctcccttgaaaagtaaaatttatactcccttccctcataagatgtttgaattacaacactctccct 38955497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 236
Target Start/End: Original strand, 20691211 - 20691253
Alignment:
Q  194 taaaatttatactcccctcccgtatgagatacttgaattacaa 236  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||    
T  20691211 taaaatttatactcccctcccatataagatgcttgaattacaa 20691253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 154
Target Start/End: Complemental strand, 2074796 - 2074739
Alignment:
Q  97 aagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctc 154  Q
    |||||||||||| | | | || ||||||| ||| ||||||||||||||||||||||||    
T  2074796 aagagtaaattatactccccttccctaagagaaacttgaattacactcccctcccctc 2074739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 232
Target Start/End: Complemental strand, 18338187 - 18338138
Alignment:
Q  183 cccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaatt 232  Q
    ||||||||| |||||| ||||||||||||||| ||| |||| ||||||||    
T  18338187 cccttgaaaagtaaaagttatactcccctcccctataagatgcttgaatt 18338138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 31886432 - 31886358
Alignment:
Q  127 gaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatac 205  Q
    |||| |||||||||||||||||||||||    ||| ||||||||||||||||||  || ||||||  ||||| ||||||    
T  31886432 gaagtttgaattacactcccctcccctc----ttgagttaaaatatacatttttctccgttgaaaaataaaacttatac 31886358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 40956840 - 40956885
Alignment:
Q  193 gtaaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    ||||||||||||||||||||||  || |||| ||||||||||||||    
T  40956840 gtaaaatttatactcccctccctcataagatgcttgaattacaacc 40956885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 6123923 - 6123871
Alignment:
Q  185 cttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaac 237  Q
    ||||||| ||||||| ||||||||| |||| |||  |||||||||||||||||    
T  6123923 cttgaaaagtaaaatgtatactcccatcccctatatgatacttgaattacaac 6123871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 170
Target Start/End: Original strand, 15175331 - 15175375
Alignment:
Q  127 gaagcttgaattacactcccctcccct-ccctcttgtgttaaaat 170  Q
    ||||||||||||||| ||||||||||| ||||||| |||||||||    
T  15175331 gaagcttgaattacattcccctcccctcccctcttttgttaaaat 15175375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 238
Target Start/End: Original strand, 24624913 - 24624957
Alignment:
Q  194 taaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    ||||||||||||||||||| | ||| |||| ||||||||||||||    
T  24624913 taaaatttatactcccctctcttataagatgcttgaattacaacc 24624957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 6e-25; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 99 - 238
Target Start/End: Complemental strand, 49765208 - 49765073
Alignment:
Q  99 gagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaa 198  Q
    |||||||||||| |||||| |||  |  || | |||||||||||||||||||||||    || ||||||||||||||||     ||||||||||||||||    
T  49765208 gagtaaattacacttctctccccgcaaagatgtttgaattacactcccctcccctc----ttatgttaaaatatacattcccctcccttgaaaggtaaaa 49765113  T
Q  199 tttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    |||||||||||||||| ||| |||||||||||||||||||    
T  49765112 tttatactcccctcccctataagatacttgaattacaacc 49765073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 11397584 - 11397717
Alignment:
Q  99 gagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaa 198  Q
    |||||||||||| |||  | ||||||| ||||||||||||||||| ||||||||||    || |||||||||||||| | |   ||||||||| ||||||    
T  11397584 gagtaaattacacttccttcccctaagagaagcttgaattacacttccctcccctc----ttatgttaaaatatacactctcatcccttgaaaagtaaaa 11397679  T
Q  199 tttatactcccctcccgtatgagatacttgaattacaa 236  Q
    |||||||||| ||||| ||| |||| ||||||||||||    
T  11397680 tttatactccactcccctataagatgcttgaattacaa 11397717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 236
Target Start/End: Original strand, 54403587 - 54403689
Alignment:
Q  130 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 229  Q
    |||||||||||||||||||||||||    || |||||||||||||| ||    ||||||||| |||||| ||||||||||||||| ||| | ||||||||    
T  54403587 gcttgaattacactcccctcccctc----ttatgttaaaatatacacttccctcccttgaaaagtaaaagttatactcccctcccttataaaatacttga 54403682  T
Q  230 attacaa 236  Q
    |||||||    
T  54403683 attacaa 54403689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 238
Target Start/End: Complemental strand, 40036477 - 40036340
Alignment:
Q  97 aagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaa 196  Q
    |||||||||||||| |   ||||||| |  || |||||||||||| ||||||||||||    || |||||||||||||| |     |||||| || ||||    
T  40036477 aagagtaaattacactctcctaccctcaaagatgcttgaattacattcccctcccctc----ttatgttaaaatatacactcccctcccttgcaaagtaa 40036382  T
Q  197 aatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    |||||||||||||||||| ||| |||||||||||||||||||    
T  40036381 aatttatactcccctcccctataagatacttgaattacaacc 40036340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 130 - 248
Target Start/End: Original strand, 1262425 - 1262540
Alignment:
Q  130 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 229  Q
    |||||||||||||||||||||||||    || |||||||||||||| | |   | ||||||| |||||||||||||||| ||||| ||| |||| ||||     
T  1262425 gcttgaattacactcccctcccctc----ttatgttaaaatatacactctcctctcttgaaaagtaaaatttatactcctctcccctataagatgcttgc 1262520  T
Q  230 attacaacct-ctccctgaa 248  Q
    |||||||||| |||||||||    
T  1262521 attacaacctcctccctgaa 1262540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 233
Target Start/End: Original strand, 13623172 - 13623301
Alignment:
Q  99 gagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaa 198  Q
    |||||||||||| ||| || |||| |  || |||||||||||||| |||||    ||||||| |||||||||||||| ||    |||||||||  |||||    
T  13623172 gagtaaattacacttcactcccctcaaagatgcttgaattacacttccctc----ccctcttatgttaaaatatacacttccctcccttgaaaattaaaa 13623267  T
Q  199 tttatactcccctcccgtatgagatacttgaatta 233  Q
    ||||||| |||||||| ||| ||||||||||||||    
T  13623268 tttatac-cccctcccttataagatacttgaatta 13623301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 237
Target Start/End: Original strand, 25480524 - 25480658
Alignment:
Q  99 gagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaa 198  Q
    |||||||||||| || ||| |||| |  || |||||||||| ||||||||||| ||    || |||||||||||||| |||   |||||| || ||||||    
T  25480524 gagtaaattacacttttcttcccttaaagatgcttgaattatactcccctcccatc----ttatgttaaaatatacactttcctcccttgtaaagtaaaa 25480619  T
Q  199 tttatactcccctcccgtatgagatacttgaattacaac 237  Q
    ||||||| |||||||| ||| |||| ||| |||||||||    
T  25480620 tttatacacccctcccctataagatgcttaaattacaac 25480658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 238
Target Start/End: Original strand, 27394299 - 27394383
Alignment:
Q  154 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    ||||||| ||||||||||||||||     ||||| ||| ||||||||||||||| |||| | ||| |||| ||||||||||||||    
T  27394299 ccctcttatgttaaaatatacattcccctcccttaaaaagtaaaatttatactctcctctcttataagatgcttgaattacaacc 27394383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 235
Target Start/End: Complemental strand, 48842058 - 48841970
Alignment:
Q  147 ctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattaca 235  Q
    ||||||||||| || |||||||||||||| |     ||||| ||| |||||||||||| ||||||||| ||| |||| |||||||||||    
T  48842058 ctcccctcccttttatgttaaaatatacactaccatcccttaaaaagtaaaatttatattcccctcccctataagatgcttgaattaca 48841970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 183 - 245
Target Start/End: Complemental strand, 6296744 - 6296681
Alignment:
Q  183 cccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaac-ctctccct 245  Q
    ||||| ||| |||||||||||||||||||||| ||| ||||| ||||||| |||| ||||||||    
T  6296744 cccttcaaaagtaaaatttatactcccctcccttataagatatttgaattgcaactctctccct 6296681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 14600405 - 14600509
Alignment:
Q  130 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 229  Q
    ||||||||||||||||||||||| |    || |||||||||||||| ||    || |||||| ||||| || ||||||||||||| | |||||| |||||    
T  14600405 gcttgaattacactcccctccccac----ttatgttaaaatatacacttcactcctttgaaaagtaaatttgatactcccctcccttgtgagatgcttga 14600500  T
Q  230 attacaacc 238  Q
    ||| |||||    
T  14600501 atttcaacc 14600509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 238
Target Start/End: Original strand, 48223552 - 48223692
Alignment:
Q  94 tttaagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaagg 193  Q
    ||||||||||||||||| | | ||  |||||| || ||||||||||||||  ||||    || |||| |||||||||||||| || |  |||| |||| |    
T  48223552 tttaagagtaaattacactcccctcgcctaagagatgcttgaattacactttcctc----ccttcttatgttaaaatatacacttctctccctcgaaaag 48223647  T
Q  194 taaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    |||||| ||||||||| |||| | | |||| |||||||| |||||    
T  48223648 taaaatctatactcccatcccctttcagatgcttgaattgcaacc 48223692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 234
Target Start/End: Complemental strand, 3541110 - 3541032
Alignment:
Q  156 ctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattac 234  Q
    ||||| ||||||||||||||||     ||| ||||| |||||||||||||| ||||||| ||| |||| ||||||||||    
T  3541110 ctcttatgttaaaatatacattcccctcccatgaaaagtaaaatttatactaccctcccctataagatgcttgaattac 3541032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 11056536 - 11056494
Alignment:
Q  194 taaaatttatactcccctcccgtatgagatacttgaattacaa 236  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||    
T  11056536 taaaatttatactcccctcccttataagatgcttgaattacaa 11056494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 237
Target Start/End: Original strand, 30127669 - 30127723
Alignment:
Q  183 cccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaac 237  Q
    ||||| ||| |||||||||||||||||||||  ||||||||  ||||||||||||    
T  30127669 cccttaaaaagtaaaatttatactcccctcctctatgagatgtttgaattacaac 30127723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 37183739 - 37183697
Alignment:
Q  194 taaaatttatactcccctcccgtatgagatacttgaattacaa 236  Q
    |||||||||||||||||| || ||| |||||||||||||||||    
T  37183739 taaaatttatactccccttccttataagatacttgaattacaa 37183697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 238
Target Start/End: Complemental strand, 17764990 - 17764905
Alignment:
Q  154 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccc-tcccgtatgagatacttgaattacaacc 238  Q
    ||||||| |||||||||||||| |     ||||||||| |||| ||||||||||||| |||| ||| |||| ||||||||||||||    
T  17764990 ccctcttatgttaaaatatacactcccctcccttgaaaagtaagatttatactccccctcccctataagatgcttgaattacaacc 17764905  T

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Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 238
Target Start/End: Complemental strand, 19066310 - 19066225
Alignment:
Q  154 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccc-tcccgtatgagatacttgaattacaacc 238  Q
    ||||||| |||||||||||||| |     ||||||||| |||| ||||||||||||| |||| ||| |||| ||||||||||||||    
T  19066310 ccctcttatgttaaaatatacactcccctcccttgaaaagtaagatttatactccccctcccctataagatgcttgaattacaacc 19066225  T

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Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Original strand, 41865075 - 41865116
Alignment:
Q  195 aaaatttatactcccctcccgtatgagatacttgaattacaa 236  Q
    |||||||||||||||||||| ||| |||| ||||||||||||    
T  41865075 aaaatttatactcccctcccttataagatgcttgaattacaa 41865116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 44500091 - 44499986
Alignment:
Q  130 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 229  Q
    |||||||||||||||||||||    |||||| |||||||||||||| ||    | ||||||| |||||| ||||| || | |||| ||| |||| |||||    
T  44500091 gcttgaattacactcccctcc----cctcttatgttaaaatatacacttccctctcttgaaaagtaaaa-ttataatcacatcccttataagatgcttga 44499997  T
Q  230 attacaacctc 240  Q
    |||||||||||    
T  44499996 attacaacctc 44499986  T

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Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 154
Target Start/End: Complemental strand, 1263139 - 1263083
Alignment:
Q  98 agagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctc 154  Q
    ||||||||||||||| | || |||| |  || |||||||||||||||||||||||||    
T  1263139 agagtaaattacattcccctcccctcaaagatgcttgaattacactcccctcccctc 1263083  T

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Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 153
Target Start/End: Complemental strand, 5984998 - 5984934
Alignment:
Q  89 aaatatttaagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccct 153  Q
    ||||| |||||||||||||||| | | || |||| |  || ||||||||||||||||||||||||    
T  5984998 aaataattaagagtaaattacactcccctcccctcaaagatgcttgaattacactcccctcccct 5984934  T

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Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 27255313 - 27255418
Alignment:
Q  130 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatt-tatactcccctcccgtatgagatacttg 228  Q
    ||||||||||||||| ||||    ||||||| |||||||||||||| |  |  ||||||||| ||||| ||  ||||||||||||| |||||||  ||||    
T  27255313 gcttgaattacactctcctc----ccctcttatgttaaaatatacactcatctcccttgaaaagtaaagttgaatactcccctcccttatgagaagcttg 27255408  T
Q  229 aattacaacc 238  Q
    |||| |||||    
T  27255409 aatttcaacc 27255418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 237
Target Start/End: Complemental strand, 30605392 - 30605291
Alignment:
Q  132 ttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaat 231  Q
    ||||||||||||||||||| |||    || |||||||||||||| ||    | ||||||  ||||||| || ||||||||||| ||| |||| |||||||    
T  30605392 ttgaattacactcccctccactc----ttatgttaaaatatacacttccctctcttgaatagtaaaatctacactcccctcccctataagatgcttgaat 30605297  T
Q  232 tacaac 237  Q
    ||||||    
T  30605296 tacaac 30605291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 33978635 - 33978687
Alignment:
Q  186 ttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    |||||| ||||||||||||||| |||||| ||| ||||  |||||||||||||    
T  33978635 ttgaaaagtaaaatttatactctcctcccctataagatgtttgaattacaacc 33978687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 238
Target Start/End: Original strand, 49080034 - 49080090
Alignment:
Q  183 cccttgaaaggtaaaatttatact-cccctcccgtatgagatacttgaattacaacc 238  Q
    ||||||||| |||| ||||||||| |||||||| ||| |||| ||||||||||||||    
T  49080034 cccttgaaaagtaagatttatactccccctcccctataagatgcttgaattacaacc 49080090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 54404184 - 54404152
Alignment:
Q  122 taagggaagcttgaattacactcccctcccctc 154  Q
    |||| ||||||||||||||||||||||||||||    
T  54404184 taagagaagcttgaattacactcccctcccctc 54404152  T

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Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 98 - 238
Target Start/End: Original strand, 31709055 - 31709196
Alignment:
Q  98 agagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccct-ccctcttgtgttaaaatatacattttttccccttgaaaggtaa 196  Q
    ||||||||||||| ||| || ||||||| || |||||||||||||||||||||||| ||||||| |||||||||||||| ||     |||||||| ||||    
T  31709055 agagtaaattacacttccctcccctaagagatgcttgaattacactcccctcccctcccctcttatgttaaaatatacacttcccttccttgaaaagtaa 31709154  T
Q  197 aatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    |||||||| |||||| || | |||||| |||||||| |||||    
T  31709155 aatttatattccccttccatttgagatgcttgaattgcaacc 31709196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 98 - 237
Target Start/End: Complemental strand, 22298331 - 22298196
Alignment:
Q  98 agagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaa 197  Q
    ||||||||||||| | ||||   ||||| ||||||||||||||||||| ||||||||    || |||||||||||||| | ||  |||||||||  ||||    
T  22298331 agagtaaattacactcctctcttctaagagaagcttgaattacactcctctcccctc----ttatgttaaaatatacactcttctcccttgaaaaataaa 22298236  T
Q  198 atttatactcccctcccgtatgagatacttgaattacaac 237  Q
    ||||||||||||||| | ||| ||||||||||||||||||    
T  22298235 atttatactcccctcgcctataagatacttgaattacaac 22298196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 11796858 - 11796755
Alignment:
Q  130 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 229  Q
    |||||||||||||||||||||||||    ||  ||||||||||||||||   | |||||||| |||||||||||||||||||||| ||| |||| |||||    
T  11796858 gcttgaattacactcccctcccctc----ttaagttaaaatatacatttcc-ctccttgaaaagtaaaatttatactcccctcccctataagatgcttga 11796764  T
Q  230 attacaacc 238  Q
    |||||||||    
T  11796763 attacaacc 11796755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 132 - 238
Target Start/End: Complemental strand, 34173760 - 34173658
Alignment:
Q  132 ttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaat 231  Q
    |||||||||||||||||||||||    || ||||||||||||||||     ||||||||| |||||||||||| ||||||||| ||| |||| |||||||    
T  34173760 ttgaattacactcccctcccctc----ttatgttaaaatatacattcccctcccttgaaaagtaaaatttatattcccctcccctataagatgcttgaat 34173665  T
Q  232 tacaacc 238  Q
    |||||||    
T  34173664 tacaacc 34173658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 5790035 - 5790137
Alignment:
Q  130 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 229  Q
    |||||||||||||||||||||      |||| ||||||||||||||||  |  |||||||||  ||||||||||||||||||||| ||| |||| |||||    
T  5790035 gcttgaattacactcccctcc------tcttatgttaaaatatacattcctcacccttgaaaaataaaatttatactcccctcccttataagatgcttga 5790128  T
Q  230 attacaacc 238  Q
    ||| |||||    
T  5790129 attgcaacc 5790137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 130 - 207
Target Start/End: Complemental strand, 5475182 - 5475109
Alignment:
Q  130 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactc 207  Q
    ||||||||||||||| |||||||||    || |||||||||||||||||||| ||| ||||| |||||||||||||||    
T  5475182 gcttgaattacactctcctcccctc----ttatgttaaaatatacatttttttcccctgaaaagtaaaatttatactc 5475109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 240
Target Start/End: Complemental strand, 37199646 - 37199542
Alignment:
Q  132 ttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaat 231  Q
    |||||||||||||||||||||||    || |||||||||||||| |     ||||||||| |||||||||||||||||||||| ||| |||| || ||||    
T  37199646 ttgaattacactcccctcccctc----ttatgttaaaatatacactcccctcccttgaaaagtaaaatttatactcccctcccctataagatgctcgaat 37199551  T
Q  232 tacaacctc 240  Q
    |||| ||||    
T  37199550 tacatcctc 37199542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 3045628 - 3045546
Alignment:
Q  153 tccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattaca 235  Q
    |||||||| |||||||||||||| ||    | ||||||| |||||||||||||||||||||| ||| |||| |||||||||||    
T  3045628 tccctcttatgttaaaatatacacttccctctcttgaaaagtaaaatttatactcccctcccctataagatgcttgaattaca 3045546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 240
Target Start/End: Original strand, 41077569 - 41077625
Alignment:
Q  184 ccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacctc 240  Q
    |||| ||| |||||||||||||||||||||| ||| |||| ||||||||||||||||    
T  41077569 ccttaaaaagtaaaatttatactcccctcccttataagatgcttgaattacaacctc 41077625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 238
Target Start/End: Original strand, 31597299 - 31597354
Alignment:
Q  183 cccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    ||||||||| |||||||||| ||||||||||| ||| |||| ||||||||||||||    
T  31597299 cccttgaaaagtaaaatttacactcccctcccctataagatgcttgaattacaacc 31597354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 33146060 - 33146164
Alignment:
Q  130 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 229  Q
    ||||||||| |||||||||||||||    || |||||||||||||| |     ||||||||| | ||||||||||| |||||||| ||| |||| |||||    
T  33146060 gcttgaattgcactcccctcccctc----ttatgttaaaatatacactcccctcccttgaaaaggaaaatttatacccccctcccctataagatgcttga 33146155  T
Q  230 attacaacc 238  Q
    |||||||||    
T  33146156 attacaacc 33146164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 241
Target Start/End: Complemental strand, 37009688 - 37009601
Alignment:
Q  154 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacctct 241  Q
    ||||||| |||||||||||||| |     ||||||||| |||||||||| ||||||||||| ||| ||||  ||||||||||||||||    
T  37009688 ccctcttatgttaaaatatacactcccctcccttgaaaagtaaaatttacactcccctcccctataagatgtttgaattacaacctct 37009601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 238
Target Start/End: Complemental strand, 43439826 - 43439743
Alignment:
Q  155 cctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    |||||| |||||||||||||| | |   |||||||||  |||||||||||||| |||||| ||| |||| ||||||||||||||    
T  43439826 cctcttatgttaaaatatacactctcctcccttgaaaaataaaatttatactctcctcccttataagatgcttgaattacaacc 43439743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 4437977 - 4437923
Alignment:
Q  184 ccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    ||||| || |||||||||||||||||||||| ||| |||| ||||||||||||||    
T  4437977 ccttgtaaagtaaaatttatactcccctcccttataagatgcttgaattacaacc 4437923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 237
Target Start/End: Original strand, 40020157 - 40020227
Alignment:
Q  167 aaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaac 237  Q
    ||||||||||||||| |||||||||  |||||||||||||||||| || | ||||||  ||||||| ||||    
T  40020157 aaatatacatttttttcccttgaaaaataaaatttatactccccttccctttgagatgtttgaattgcaac 40020227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 238
Target Start/End: Original strand, 28167567 - 28167669
Alignment:
Q  132 ttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaat 231  Q
    |||||||||||||||||    |||||||| |||||||||||||| | |   ||||| ||| ||||| |||||||| | ||||| ||| |||| |||||||    
T  28167567 ttgaattacactcccct----tccctcttatgttaaaatatacactctcctcccttaaaaagtaaagtttatacttctctcccttataagatgcttgaat 28167662  T
Q  232 tacaacc 238  Q
    |||||||    
T  28167663 tacaacc 28167669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 235
Target Start/End: Original strand, 7939352 - 7939453
Alignment:
Q  130 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 229  Q
    ||||||||||||||| |||    |||||||| |||||||||||||| ||    ||||||||| ||||||||||||||| |||  | ||| |||| |||||    
T  7939352 gcttgaattacactctcct----tccctcttatgttaaaatatacacttacctcccttgaaaagtaaaatttatactctcctttcctataagatgcttga 7939447  T
Q  230 attaca 235  Q
    ||||||    
T  7939448 attaca 7939453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 183 - 238
Target Start/End: Complemental strand, 17829718 - 17829663
Alignment:
Q  183 cccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    |||||||||  ||||||||| ||||||||||| ||| |||| ||||||||||||||    
T  17829718 cccttgaaaaataaaatttacactcccctcccttataagatgcttgaattacaacc 17829663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 183 - 238
Target Start/End: Original strand, 37329774 - 37329829
Alignment:
Q  183 cccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    |||||||||  ||||||||||||| ||||||| ||| |||| ||||||||||||||    
T  37329774 cccttgaaaaataaaatttatactaccctcccttataagatgcttgaattacaacc 37329829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 236
Target Start/End: Original strand, 551923 - 551965
Alignment:
Q  194 taaaatttatactcccctcccgtatgagatacttgaattacaa 236  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||    
T  551923 taaaatttatactcccctcccttataagatgcttgaattacaa 551965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 240
Target Start/End: Complemental strand, 11564497 - 11564411
Alignment:
Q  154 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacctc 240  Q
    ||||||| |||||||||||||| | |   ||||||||| |||||| |||||||| | |||| ||| |||| ||||||||||| ||||    
T  11564497 ccctcttatgttaaaatatacactctcctcccttgaaaagtaaaacttatactctcatcccctataagatgcttgaattacatcctc 11564411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 240
Target Start/End: Original strand, 11942100 - 11942146
Alignment:
Q  194 taaaatttatactcccctcccgtatgagatacttgaattacaacctc 240  Q
    ||||||||| ||||||||||| ||| |||| ||||||||||||||||    
T  11942100 taaaatttacactcccctcccttataagatgcttgaattacaacctc 11942146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 236
Target Start/End: Original strand, 16110580 - 16110622
Alignment:
Q  194 taaaatttatactcccctcccgtatgagatacttgaattacaa 236  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||    
T  16110580 taaaatttatactcccctcccttataagatgcttgaattacaa 16110622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 236
Target Start/End: Original strand, 20893305 - 20893347
Alignment:
Q  194 taaaatttatactcccctcccgtatgagatacttgaattacaa 236  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||    
T  20893305 taaaatttatactcccctcccttataagatgcttgaattacaa 20893347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 241
Target Start/End: Complemental strand, 22607031 - 22606924
Alignment:
Q  130 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 229  Q
    ||||||||||||||||||||  |||    || |||||||||||||| | | | |||| |||| |||||| ||||||||||||| | ||| |||| |||      
T  22607031 gcttgaattacactcccctcttctc----ttatgttaaaatatacactctcttccctagaaaagtaaaacttatactcccctcgcctatcagatgcttat 22606936  T
Q  230 attacaacctct 241  Q
    ||||||||||||    
T  22606935 attacaacctct 22606924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 235
Target Start/End: Complemental strand, 40769416 - 40769318
Alignment:
Q  132 ttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaat 231  Q
    ||||||||||||||||||     |||||| |||||||||||||| | |   ||||||||| ||||||||||||||  |||||| ||| |||| |||||||    
T  40769416 ttgaattacactcccctc----acctcttatgttaaaatatacactctcctcccttgaaaagtaaaatttatact-acctcccctataagatgcttgaat 40769322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 32023023 - 32023100
Alignment:
Q  162 tgttaaaatatacattttttccccttgaaaggtaaaatttatact-cccctcccgtatgagatacttgaattacaacc 238  Q
    |||||||||||||| ||    |||||| || |||||||||||||| |||||||| ||| |||| ||||||||||||||    
T  32023023 tgttaaaatatacacttccctcccttgcaaagtaaaatttatactccccctcccttataagatgcttgaattacaacc 32023100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 236
Target Start/End: Complemental strand, 13874012 - 13873932
Alignment:
Q  156 ctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaa 236  Q
    ||||| |||||||||||||| |  |  |||||||||  ||||||| ||||||||||||| ||| |||| | ||||||||||    
T  13874012 ctcttatgttaaaatatacactcatctcccttgaaaaataaaattaatactcccctcccttataagatgcatgaattacaa 13873932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 236
Target Start/End: Complemental strand, 14014137 - 14014057
Alignment:
Q  156 ctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaa 236  Q
    ||||| |||||||||||||| |  |  |||||||||  ||||||| ||||||||||||| ||| |||| | ||||||||||    
T  14014137 ctcttatgttaaaatatacactcatctcccttgaaaaataaaattaatactcccctcccttataagatgcatgaattacaa 14014057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 149
Target Start/End: Original strand, 37198921 - 37198973
Alignment:
Q  97 aagagtaaattacatttctctaccctaagggaagcttgaattacactcccctc 149  Q
    |||||||||||||||||| || |||| |  || ||||||||||||||||||||    
T  37198921 aagagtaaattacatttccctcccctcaaagatgcttgaattacactcccctc 37198973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 43657569 - 43657517
Alignment:
Q  194 taaaatttatactcccctcccgtatgagatacttgaattac-aacctctccct 245  Q
    ||||||||||||||||||||| ||| |||| ||||| |||| |||||||||||    
T  43657569 taaaatttatactcccctcccttataagatgcttgacttacaaacctctccct 43657517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 240
Target Start/End: Complemental strand, 49129727 - 49129618
Alignment:
Q  127 gaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatact 226  Q
    |||| |||||||||||||||||||||||    || |||||||||||||| | ||  |||||||||  ||||||||||||||||||||| ||| |||| ||    
T  49129727 gaagtttgaattacactcccctcccctc----ttatgttaaaatatacaatcttctcccttgaaaaataaaatttatactcccctcccttataagatgct 49129632  T
Q  227 tgaattacaacctc 240  Q
    ||||||||||||||    
T  49129631 tgaattacaacctc 49129618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 98 - 238
Target Start/End: Original strand, 45737298 - 45737434
Alignment:
Q  98 agagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaa 197  Q
    ||||||||||||| | |||| |||| |  || |||||||||||||||||||||||||    || |||||||||||||| | |   |||||||||  ||||    
T  45737298 agagtaaattacactcctctcccctcaaagatgcttgaattacactcccctcccctc----ttatgttaaaatatacactctcctcccttgaaaaataaa 45737393  T
Q  198 atttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    ||||||||||||||||| ||| |||| ||||||||||||||    
T  45737394 atttatactcccctcccttataagattcttgaattacaacc 45737434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 99 - 238
Target Start/End: Original strand, 27225670 - 27225805
Alignment:
Q  99 gagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaa 198  Q
    |||||||||||| | | || ||||||| || ||||||||||||||| |||||||||    || |||||||||||||| ||    ||||||||| ||||||    
T  27225670 gagtaaattacaatcccctcccctaagagatgcttgaattacactctcctcccctc----ttatgttaaaatatacacttccctcccttgaaaagtaaaa 27225765  T
Q  199 tttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    |||||||||||||||| | |||||| |||||||| |||||    
T  27225766 tttatactcccctcccatttgagatgcttgaattgcaacc 27225805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 91 - 235
Target Start/End: Original strand, 45737986 - 45738126
Alignment:
Q  91 atatttaagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaa 190  Q
    |||||| ||||||||||||| | | || |||| |  || ||||||||||||||| |||||||||    || |||||||||||||| ||    ||||| ||    
T  45737986 atattttagagtaaattacactcccctcccctcaaagatgcttgaattacactctcctcccctc----ttatgttaaaatatacacttccctcccttaaa 45738081  T
Q  191 aggtaaaatttatactcccctcccgtatgagatacttgaattaca 235  Q
    | |||||||||||||||||||||| ||| |||| |||||||||||    
T  45738082 aagtaaaatttatactcccctcccctataagatgcttgaattaca 45738126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 10012511 - 10012397
Alignment:
Q  119 ccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtat 218  Q
    ||||||| |||||||||||||| || || ||    ||||||| |||||||||||||| ||    ||||||||  |||||||||||||||||||||| |||    
T  10012511 ccctaagagaagcttgaattacccttccatc----ccctcttatgttaaaatatacacttccctcccttgaacagtaaaatttatactcccctcccttat 10012416  T
Q  219 gagatacttgaattacaac 237  Q
     |||| |||||||||||||    
T  10012415 aagatgcttgaattacaac 10012397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 132 - 237
Target Start/End: Complemental strand, 1114929 - 1114828
Alignment:
Q  132 ttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaat 231  Q
    |||||||||||||||||||||||    || |||||||||||||| ||||  |||||||||  |||||||||||||| | |||  ||| |||| |||||||    
T  1114929 ttgaattacactcccctcccctc----ttatgttaaaatatacacttttcacccttgaaaaataaaatttatactctcatcctttataagatgcttgaat 1114834  T
Q  232 tacaac 237  Q
    ||||||    
T  1114833 tacaac 1114828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 97 - 232
Target Start/End: Original strand, 16536364 - 16536495
Alignment:
Q  97 aagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaa 196  Q
    |||||||||||||| | | || |||| |  || |||||||||||||||||||||||||    || |||||||||||||| |     ||||||||| ||||    
T  16536364 aagagtaaattacactcccctcccctcaaagatgcttgaattacactcccctcccctc----ttatgttaaaatatacactcccctcccttgaaaagtaa 16536459  T
Q  197 aatttatactcccctcccgtatgagatacttgaatt 232  Q
    | || ||||||||||||| |||||||| ||||||||    
T  16536460 atttgatactcccctcccttatgagatgcttgaatt 16536495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 154 - 240
Target Start/End: Complemental strand, 28198152 - 28198066
Alignment:
Q  154 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacctc 240  Q
    ||||||| |||| ||||||||| | |   |||||||||  ||||||||||||||||||||| ||| |||| ||||||||||||||||    
T  28198152 ccctcttatgtttaaatatacactctcctcccttgaaaaataaaatttatactcccctcccttataagatgcttgaattacaacctc 28198066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 238
Target Start/End: Complemental strand, 33126879 - 33126798
Alignment:
Q  157 tcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    |||| |||||||||||||| |||   ||||||||| ||||||||||||||||| |||| | |||||| |||||||| |||||    
T  33126879 tcttatgttaaaatatacactttcctcccttgaaaagtaaaatttatactcccatcccctttgagatgcttgaattgcaacc 33126798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 132 - 207
Target Start/End: Complemental strand, 4667594 - 4667518
Alignment:
Q  132 ttgaattacactcccctcccctc-cctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactc 207  Q
    ||||||||||||| | ||||||| |||||| |||||||||||||| | ||  ||||||||| |||||||||||||||    
T  4667594 ttgaattacactctcatcccctctcctcttatgttaaaatatacactcttctcccttgaaaagtaaaatttatactc 4667518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 238
Target Start/End: Original strand, 25990422 - 25990558
Alignment:
Q  98 agagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaa 197  Q
    ||||||||||||||| |||| || | |  ||  ||||||||||||| ||||||||||    || |||||||||||||||| |    ||||||||  ||||    
T  25990422 agagtaaattacattcctcttccatcaaagatacttgaattacacttccctcccctc----ttatgttaaaatatacattctccttccttgaaaaataaa 25990517  T
Q  198 atttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    ||||||| | ||||||| ||| |||| ||||||||||||||    
T  25990518 atttataattccctcccttataagatgcttgaattacaacc 25990558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 233
Target Start/End: Original strand, 36604719 - 36604851
Alignment:
Q  97 aagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaa 196  Q
    |||||||||||||| | | || |||| |  || |||||||||||||||| ||    |||||||| |||||||||||||| ||    || |||||| ||||    
T  36604719 aagagtaaattacactcccctcccctcaaagatgcttgaattacactcctct----tccctcttatgttaaaatatacacttccctcctttgaaaagtaa 36604814  T
Q  197 aatttatactcccctcccgtatgagatacttgaatta 233  Q
    ||||||||||| |||||| ||| |||| |||||||||    
T  36604815 aatttatactctcctcccctataagatgcttgaatta 36604851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 154
Target Start/End: Complemental strand, 9998085 - 9998023
Alignment:
Q  92 tatttaagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctc 154  Q
    ||||||||| ||||||||||| | || ||||||| |||||||||||||| || ||||||||||    
T  9998085 tatttaagattaaattacattcccctcccctaagagaagcttgaattacccttccctcccctc 9998023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 96 - 238
Target Start/End: Complemental strand, 7307664 - 7307524
Alignment:
Q  96 taagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccc-tcttgtgttaaaatatacattttttccccttgaaaggt 194  Q
    ||||| ||||||||| | | || ||||||| ||  |||||||||||| |   ||||||||| |||| |||||||||||| | ||    ||||||||| ||    
T  7307664 taagaataaattacactcccctcccctaagagatacttgaattacacac---tcccctcccctcttatgttaaaatatataattccctcccttgaaaagt 7307568  T
Q  195 aaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
     ||||||||||||||||||| | |||||| |||||||| |||||    
T  7307567 taaatttatactcccctcccctttgagatgcttgaattgcaacc 7307524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 130 - 236
Target Start/End: Original strand, 18406555 - 18406657
Alignment:
Q  130 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 229  Q
    ||||||||||||||||||||| |||    || |||||||||||||| |     |||||||||  ||||||||| ||||||||||| ||| |||| |||||    
T  18406555 gcttgaattacactcccctcctctc----ttatgttaaaatatacactaccctcccttgaaaaataaaatttacactcccctcccttataagatgcttga 18406650  T
Q  230 attacaa 236  Q
    |||||||    
T  18406651 attacaa 18406657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 238
Target Start/End: Original strand, 19071739 - 19071840
Alignment:
Q  132 ttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaat 231  Q
    ||||||||||||| |||||||||    || |||||||||||||| |   |||| | |||| |||||||||||||||||||||  ||| |||| |||||||    
T  19071739 ttgaattacactctcctcccctc----ttatgttaaaatatacactccctcccgt-gaaaagtaaaatttatactcccctcctctataagatgcttgaat 19071833  T
Q  232 tacaacc 238  Q
    |||||||    
T  19071834 tacaacc 19071840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 238
Target Start/End: Original strand, 19119629 - 19119730
Alignment:
Q  132 ttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaat 231  Q
    ||||||||||||| |||||||||    || |||||||||||||| |   |||| | |||| |||||||||||||||||||||  ||| |||| |||||||    
T  19119629 ttgaattacactctcctcccctc----ttatgttaaaatatacactccctcccgt-gaaaagtaaaatttatactcccctcctctataagatgcttgaat 19119723  T
Q  232 tacaacc 238  Q
    |||||||    
T  19119724 tacaacc 19119730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 50143379 - 50143512
Alignment:
Q  99 gagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaa 198  Q
    |||||||||||| |  ||| |||| || || | ||||||||||||||||||    ||||||| ||||||||||||||||     |||||||||  || ||    
T  50143379 gagtaaattacactattcttccctcagagatgtttgaattacactcccctc----ccctcttatgttaaaatatacattcccctcccttgaaaaatataa 50143474  T
Q  199 tttatactcccctcccgtatgagatacttgaattacaa 236  Q
    || ||| ||||||||| ||| |||| ||||||||||||    
T  50143475 ttaataatcccctcccctataagatgcttgaattacaa 50143512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 183 - 238
Target Start/End: Original strand, 27930843 - 27930898
Alignment:
Q  183 cccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    |||||| || |||||||||||||||| ||||| ||| |||| ||||||||||||||    
T  27930843 cccttgtaaagtaaaatttatactcctctcccttataagatgcttgaattacaacc 27930898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 186 - 237
Target Start/End: Complemental strand, 29778001 - 29777950
Alignment:
Q  186 ttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaac 237  Q
    |||||| |||||||||||||||||||||| ||| ||||  ||||||||||||    
T  29778001 ttgaaaagtaaaatttatactcccctcccttataagatgtttgaattacaac 29777950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 155 - 238
Target Start/End: Original strand, 44648666 - 44648749
Alignment:
Q  155 cctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    |||||| |||||||||||||| |||   |||||| || ||||||| || |||||||| || ||| |||| ||||||||||||||    
T  44648666 cctcttatgttaaaatatacactttcctcccttgtaaagtaaaatctacactccccttccctataagatgcttgaattacaacc 44648749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 25087375 - 25087425
Alignment:
Q  183 cccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaatta 233  Q
    ||||||||| ||||||| |||||||||||||  |||||||| |||||||||    
T  25087375 cccttgaaaagtaaaatctatactcccctcctctatgagatgcttgaatta 25087425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 36512086 - 36512004
Alignment:
Q  155 cctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaac 237  Q
    |||||| |||||||||||| ||||||  || ||||||  ||||||||||||| ||||||  | |||||| |||||||| ||||    
T  36512086 cctcttatgttaaaatatatatttttctcctttgaaaaataaaatttatacttccctcctctttgagatgcttgaattgcaac 36512004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 154
Target Start/End: Complemental strand, 1846620 - 1846564
Alignment:
Q  98 agagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctc 154  Q
    ||||||||||||| ||| || |||| |  || |||||||||||||||||||||||||    
T  1846620 agagtaaattacacttccctcccctcaaagatgcttgaattacactcccctcccctc 1846564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 238
Target Start/End: Complemental strand, 51612455 - 51612411
Alignment:
Q  194 taaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    |||||||||||||| |||||| ||| |||| ||||||||||||||    
T  51612455 taaaatttatactctcctcccttataagatgcttgaattacaacc 51612411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 3e-20; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 237
Target Start/End: Original strand, 21037316 - 21037427
Alignment:
Q  122 taagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgag 221  Q
    |||| |||||||||||||||||||||||| |||    || |||||||||||||| |||   ||||||||| |||||||||||||||||||||  ||| ||    
T  21037316 taagagaagcttgaattacactcccctcctctc----ttatgttaaaatatacactttcctcccttgaaaagtaaaatttatactcccctccattataag 21037411  T
Q  222 atacttgaattacaac 237  Q
    || |||||||||||||    
T  21037412 attcttgaattacaac 21037427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 96 - 238
Target Start/End: Original strand, 51019643 - 51019781
Alignment:
Q  96 taagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggta 195  Q
    ||||||||||||||| | | || ||||||| || ||||||||||||||| ||||    ||||||| |||||||||||||| ||    ||||||||| |||    
T  51019643 taagagtaaattacactgccctcccctaagagatgcttgaattacactctcctc----ccctcttatgttaaaatatacacttccctcccttgaaaagta 51019738  T
Q  196 aaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    ||||||||||| ||||||  | |||||| |||||||| |||||    
T  51019739 aaatttatacttccctccaatttgagatgcttgaattgcaacc 51019781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 235
Target Start/End: Original strand, 6711258 - 6711359
Alignment:
Q  130 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 229  Q
    |||||||||||||| ||||||||||    |||||||||||||||||  |    ||||||||| |||||||||||||||||||||| ||| |||| |||||    
T  6711258 gcttgaattacacttccctcccctc----ttgtgttaaaatatacacctccctcccttgaaaagtaaaatttatactcccctcccctataagatgcttga 6711353  T
Q  230 attaca 235  Q
    ||||||    
T  6711354 attaca 6711359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 238
Target Start/End: Complemental strand, 23722132 - 23721996
Alignment:
Q  98 agagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaa 197  Q
    ||||||||||||| ||| || |||| |  || |||||||||||||||||||||    |||||| |||||||||||||| |     |||||||||  ||||    
T  23722132 agagtaaattacacttccctcccctcaaagatgcttgaattacactcccctcc----cctcttatgttaaaatatacactaccctcccttgaaaaataaa 23722037  T
Q  198 atttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    ||||| ||||||||||| ||| |||| || |||||||||||    
T  23722036 atttacactcccctcccttataagatgctagaattacaacc 23721996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 35666000 - 35666079
Alignment:
Q  156 ctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattaca 235  Q
    ||||| |||||||||||||| ||    ||||||||| |||||||||||||||||||||| ||| |||| |||||||||||    
T  35666000 ctcttatgttaaaatatacacttacctcccttgaaaagtaaaatttatactcccctcccctataagatgcttgaattaca 35666079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 131 - 245
Target Start/End: Complemental strand, 32448988 - 32448877
Alignment:
Q  131 cttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaa 230  Q
    ||||||||||||||| ||||||||    || |||||||||||||| ||    || |||||| |||||| ||||||||||||||| ||| | |||||||||    
T  32448988 cttgaattacactccactcccctc----ttatgttaaaatatacacttccctcctttgaaaagtaaaagttatactcccctcccttataaaatacttgaa 32448893  T
Q  231 ttacaa-cctctccct 245  Q
    |||||| |||||||||    
T  32448892 ttacaatcctctccct 32448877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 130 - 237
Target Start/End: Complemental strand, 37424495 - 37424393
Alignment:
Q  130 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 229  Q
    |||||||||||| ||||||||||||    || |||||||||||||| |     |||||||||| ||||||||||||||||||||| ||| |||| |||||    
T  37424495 gcttgaattacattcccctcccctc----ttatgttaaaatatacactcacctcccttgaaag-taaaatttatactcccctcccctataagatgcttga 37424401  T
Q  230 attacaac 237  Q
    ||||||||    
T  37424400 attacaac 37424393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 245
Target Start/End: Complemental strand, 7480005 - 7479917
Alignment:
Q  157 tcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctccc-gtatgagatacttgaattacaacctctccct 245  Q
    |||| |||||||||||||| ||  |||| |||||| ||||||||||||||||||||||  ||| |||| ||||||||||||| |||||||    
T  7480005 tcttatgttaaaatatacacttcctccc-ttgaaaagtaaaatttatactcccctccctttataagatgcttgaattacaacttctccct 7479917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 212
Target Start/End: Original strand, 8138316 - 8138426
Alignment:
Q  98 agagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaa 197  Q
    ||||||||||||| | | || ||||||| |||||||||||||||| |||||    | |||||| |||||||||||||| ||    |||||||||  ||||    
T  8138316 agagtaaattacactcccctcccctaagagaagcttgaattacacacccct----ttcctcttatgttaaaatatacacttccctcccttgaaaaataaa 8138411  T
Q  198 atttatactcccctc 212  Q
    |||||||||||||||    
T  8138412 atttatactcccctc 8138426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 238
Target Start/End: Complemental strand, 49703068 - 49702987
Alignment:
Q  157 tcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    |||| |||||||||||||||||||  |||||| || |||||||||||||| | ||||| ||| ||||  |||||||||||||    
T  49703068 tcttatgttaaaatatacatttttctcccttgtaaagtaaaatttatacttctctcccttataagatgtttgaattacaacc 49702987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 130 - 235
Target Start/End: Complemental strand, 25010106 - 25010005
Alignment:
Q  130 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 229  Q
    ||||||||||||||| |||||||||    || |||||||||||||| |   | ||||||||| |||||||||||||  ||||||| ||| |||| |||||    
T  25010106 gcttgaattacactctcctcccctc----ttatgttaaaatatacactccattcccttgaaaagtaaaatttatacgtccctcccttataagatgcttga 25010011  T
Q  230 attaca 235  Q
    ||||||    
T  25010010 attaca 25010005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 154 - 238
Target Start/End: Original strand, 33046606 - 33046690
Alignment:
Q  154 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    ||||||| ||||||||| |||| |||   ||||||||| |||||||| ||||||||||||| ||| ||||  |||||||||||||    
T  33046606 ccctcttatgttaaaatctacactttactcccttgaaaagtaaaattaatactcccctcccttataagatgtttgaattacaacc 33046690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 154 - 238
Target Start/End: Complemental strand, 50825314 - 50825230
Alignment:
Q  154 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    ||||||| |||||||||||||  | | | || |||||| ||||||||||||||| |||||| ||| |||| ||||||||||||||    
T  50825314 ccctcttatgttaaaatataccctctattcctttgaaaagtaaaatttatactctcctcccctataagatgcttgaattacaacc 50825230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 54092859 - 54092783
Alignment:
Q  162 tgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    |||||||||||||| ||    ||||||||| | |||||||| ||||||||||| ||| |||||||||||||||||||    
T  54092859 tgttaaaatatacaattccctcccttgaaaagaaaaatttacactcccctcccctataagatacttgaattacaacc 54092783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 240
Target Start/End: Original strand, 4949962 - 4950066
Alignment:
Q  132 ttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaat 231  Q
    ||||||||||||||||||| |||    || |||||||||||||| |   | ||||| |||  ||||||| ||||||||||||| ||| |||| |||||||    
T  4949962 ttgaattacactcccctcctctc----ttatgttaaaatatacactcccttcccttaaaaaataaaattaatactcccctcccctataagatgcttgaat 4950057  T
Q  232 tacaacctc 240  Q
    |||||||||    
T  4950058 tacaacctc 4950066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 16192364 - 16192260
Alignment:
Q  130 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 229  Q
    ||||||||||||||||||||| |||    || |||||||||||||| |     | |||| || |||||||||||||||||||||| ||| |||| |||||    
T  16192364 gcttgaattacactcccctcctctc----ttatgttaaaatatacactcccctcacttgcaatgtaaaatttatactcccctcccttataagatgcttga 16192269  T
Q  230 attacaacc 238  Q
    |||||||||    
T  16192268 attacaacc 16192260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 238
Target Start/End: Complemental strand, 20545098 - 20544963
Alignment:
Q  99 gagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaa 198  Q
    |||||||||||| | | || |||| || || |||||||||||||||||||||    |||||| ||||||||||||||||     ||||| |||  || ||    
T  20545098 gagtaaattacactcccctcccctcagagatgcttgaattacactcccctcc----cctcttatgttaaaatatacattcccctcccttaaaaaatataa 20545003  T
Q  199 tttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    || ||| ||||||||| ||| |||| ||||||||||||||    
T  20545002 ttaataatcccctcccctataagatgcttgaattacaacc 20544963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 4963982 - 4964035
Alignment:
Q  193 gtaaaatttatactcccctcccgtatgagatacttgaattaca-acctctccct 245  Q
    ||||||||||||||||||| || |||||||| ||||||||||| ||||||||||    
T  4963982 gtaaaatttatactcccctaccctatgagatgcttgaattacacacctctccct 4964035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 97 - 235
Target Start/End: Complemental strand, 7797695 - 7797561
Alignment:
Q  97 aagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaa 196  Q
    |||||||||||||| | | || |||| |  || |||||||||||| ||||||||| ||    || |||||||||||||| ||    ||||||||| ||||    
T  7797695 aagagtaaattacactcccctcccctcaaagatgcttgaattacattcccctcccttc----ttatgttaaaatatacacttccctcccttgaaaagtaa 7797600  T
Q  197 aatttatactcccctcccgtatgagatacttgaattaca 235  Q
    |||||| |||||| |||| ||| |||| |||||||||||    
T  7797599 aatttacactcccatcccctataagattcttgaattaca 7797561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 796962 - 796910
Alignment:
Q  194 taaaatttatactcccctcccgtatgagatacttgaattac-aacctctccct 245  Q
    ||||||||||| ||||||||| ||| ||||||||||||||| |||||||||||    
T  796962 taaaatttatattcccctcccttataagatacttgaattacaaacctctccct 796910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 26705120 - 26705171
Alignment:
Q  194 taaaatttatactcccctcccgtatgagatacttgaattacaacctctccct 245  Q
    ||||||| ||||||||||||| ||| |||| |||||||||||||| ||||||    
T  26705120 taaaattaatactcccctcccctataagatgcttgaattacaacccctccct 26705171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 245
Target Start/End: Original strand, 6232524 - 6232570
Alignment:
Q  200 ttatactcccctcccgtatgagatacttgaattac-aacctctccct 245  Q
    ||||||||||||||| ||| ||||||||||||||| |||||||||||    
T  6232524 ttatactcccctcccttataagatacttgaattacaaacctctccct 6232570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 23265763 - 23265721
Alignment:
Q  194 taaaatttatactcccctcccgtatgagatacttgaattacaa 236  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||    
T  23265763 taaaatttatactcccctcccttataagatgcttgaattacaa 23265721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 233
Target Start/End: Complemental strand, 17723463 - 17723369
Alignment:
Q  135 aattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaatta 233  Q
    |||||||||||||||||||     || ||||||||||||||  ||   |||||||||  ||||||||||||||||||| | ||| |||| |||||||||    
T  17723463 aattacactcccctcccctt----ttatgttaaaatatacaccttcctcccttgaaaaataaaatttatactcccctcgcctataagatgcttgaatta 17723369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 231
Target Start/End: Original strand, 44664752 - 44664829
Alignment:
Q  154 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaat 231  Q
    ||||||| |||||||||||||||| |   |||||||||  ||||||||||| |||||| || ||| |||| |||||||    
T  44664752 ccctcttatgttaaaatatacattctcctcccttgaaaaataaaatttataatccccttccttataagatgcttgaat 44664829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 12250770 - 12250822
Alignment:
Q  194 taaaatttatactcccctcccgtatgagatacttgaattac-aacctctccct 245  Q
    ||||||||||||||||||||  ||| |||| |||||||||| |||||||||||    
T  12250770 taaaatttatactcccctccattataagatgcttgaattacaaacctctccct 12250822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 238
Target Start/End: Original strand, 19313431 - 19313475
Alignment:
Q  194 taaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    ||||||||| ||||||||||| ||| |||| ||||||||||||||    
T  19313431 taaaatttacactcccctcccttataagatgcttgaattacaacc 19313475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 46076426 - 46076478
Alignment:
Q  186 ttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    |||||| |||||||||||||||| || || ||||||||  |||||||||||||    
T  46076426 ttgaaaagtaaaatttatactcctcttccctatgagatgattgaattacaacc 46076478  T

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Target: chr8 (Bit Score: 49; Significance: 5e-19; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 132 - 245
Target Start/End: Original strand, 17564698 - 17564807
Alignment:
Q  132 ttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaat 231  Q
    |||||||||||| ||||||||||    || |||||||||||||| |     ||||||||| |||||||||||||||||||||| ||| |||| |||||||    
T  17564698 ttgaattacacttccctcccctc----ttatgttaaaatatacactcccctcccttgaaaagtaaaatttatactcccctcccctataagatgcttgaat 17564793  T
Q  232 tacaacctctccct 245  Q
    ||||||||||||||    
T  17564794 tacaacctctccct 17564807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 98 - 223
Target Start/End: Complemental strand, 44284431 - 44284310
Alignment:
Q  98 agagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaa 197  Q
    ||||||||||||| | | || ||||||| || |||||||||||||||||||||||||    || |||||||||||||| |||   |||||||||  ||||    
T  44284431 agagtaaattacactcccctcccctaagagatgcttgaattacactcccctcccctc----ttatgttaaaatatacactttcctcccttgaaaaataaa 44284336  T
Q  198 atttatactcccctcccgtatgagat 223  Q
    ||||||||||||||||| | ||||||    
T  44284335 atttatactcccctcccctttgagat 44284310  T

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Target: chr8; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 235
Target Start/End: Original strand, 34363939 - 34364039
Alignment:
Q  130 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 229  Q
    ||||||||||||||||||||||||     || |||||||||||||||||    ||||||||| ||||||||||||||||||| || ||| |||| |||||    
T  34363939 gcttgaattacactcccctcccct-----ttatgttaaaatatacatttccctcccttgaaaagtaaaatttatactccccttccctataagatgcttga 34364033  T
Q  230 attaca 235  Q
    ||||||    
T  34364034 attaca 34364039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 235
Target Start/End: Complemental strand, 8443353 - 8443273
Alignment:
Q  155 cctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattaca 235  Q
    |||||| |||||||||||||| ||  | ||||||||| ||||||||||||||| |||||| ||| |||| |||||||||||    
T  8443353 cctcttatgttaaaatatacacttccttcccttgaaaagtaaaatttatactctcctcccctataagatgcttgaattaca 8443273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 233
Target Start/End: Original strand, 32903609 - 32903741
Alignment:
Q  98 agagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttt-tccccttgaaaggtaa 196  Q
    ||||||||||||| |||||| |  |||| |||| |||||||||||||| ||||| ||    || |||||||||||||| |  | ||||||| ||| ||||    
T  32903609 agagtaaattacacttctctccgttaagagaagtttgaattacactccactcccttc----ttatgttaaaatatacactcatctccccttaaaaagtaa 32903704  T
Q  197 aatttatactcccctcccgtatgagatacttgaatta 233  Q
    |||||||||||| ||||| | |||||| |||||||||    
T  32903705 aatttatactccgctcccatttgagatgcttgaatta 32903741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 132 - 235
Target Start/End: Original strand, 14879550 - 14879649
Alignment:
Q  132 ttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaat 231  Q
    ||||||||||||| |||||||||    || |||||||||||||||||    ||||||||| |||||||||||||||||||||| ||| | ||  ||||||    
T  14879550 ttgaattacactctcctcccctc----ttatgttaaaatatacatttccgtcccttgaaaagtaaaatttatactcccctcccctataacatgtttgaat 14879645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 240
Target Start/End: Complemental strand, 34925490 - 34925348
Alignment:
Q  99 gagtaaattacatttctctaccctaagggaagcttgaattacactcccctcc-cctccctcttgtgttaaaatatacattttttccccttgaaaggtaaa 197  Q
    |||||||||||| ||| || |||| |  || |||||||||||| || ||||| |||| ||||| |||||||||||||| |     ||||||||| |||||    
T  34925490 gagtaaattacacttccctcccctcaaagatgcttgaattacattctcctccacctctctcttatgttaaaatatacactcccctcccttgaaaagtaaa 34925391  T
Q  198 atttatactcccctcccgtatgagatacttgaattacaacctc 240  Q
    || ||||||| | |||| ||| |||| ||||||||||||||||    
T  34925390 atgtatactctcttcccttataagatgcttgaattacaacctc 34925348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 96 - 237
Target Start/End: Complemental strand, 43777078 - 43776941
Alignment:
Q  96 taagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggta 195  Q
    ||||||||||||| | | |||| |||| |  || |||||||||||||||| ||    |||||||| |||| ||||||||| |||   | ||| |||  ||    
T  43777078 taagagtaaattatactcctcttccctcaaagatgcttgaattacactccact----tccctcttatgtttaaatatacactttcctctcttaaaaaata 43776983  T
Q  196 aaatttatactcccctcccgtatgagatacttgaattacaac 237  Q
    ||||||||||||||||||| ||| |||| |||||||||||||    
T  43776982 aaatttatactcccctcccttataagatgcttgaattacaac 43776941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 24809616 - 24809716
Alignment:
Q  135 aattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaag-gtaaaatttatactcccctcccgtatgagatacttgaatta 233  Q
    ||||||||||||||||||||    || |||||||||||||| ||    |||||||||  ||||||||| |||||||||||| ||| |||| |||||||||    
T  24809616 aattacactcccctcccctc----ttatgttaaaatatacacttccatcccttgaaaaagtaaaatttttactcccctcccttataagatgcttgaatta 24809711  T
Q  234 caacc 238  Q
    |||||    
T  24809712 caacc 24809716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 233
Target Start/End: Original strand, 41262122 - 41262201
Alignment:
Q  154 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaatta 233  Q
    ||||||| |||||||||||| ||||    |||||||||  ||||||||||||||||||||| ||| |||| |||||||||    
T  41262122 ccctcttatgttaaaatatatatttccctcccttgaaaaataaaatttatactcccctcccttataagatgcttgaatta 41262201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 238
Target Start/End: Complemental strand, 11760094 - 11760012
Alignment:
Q  156 ctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    ||||| |||||||||||||| | ||  || |||||| |||||||||||||||||||||  ||| |||| |||| |||||||||    
T  11760094 ctcttatgttaaaatatacactcttctcctttgaaaagtaaaatttatactcccctcctctataagatgcttgcattacaacc 11760012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 39999032 - 39998978
Alignment:
Q  186 ttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacctc 240  Q
    |||||| |||| ||||||||||||||||| ||| |||| ||||||||||||||||    
T  39999032 ttgaaaagtaagatttatactcccctcccttataagatgcttgaattacaacctc 39998978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 238
Target Start/End: Complemental strand, 30354617 - 30354472
Alignment:
Q  94 tttaagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctcc-ctcttgtgttaaaatatacattttttccccttgaaag 192  Q
    ||||||||||||||||||||| || |||| |  ||  ||||||||||||||| |||| |||| || || |||||||||||||| |  |  |||||||||     
T  30354617 tttaagagtaaattacatttccctcccctcaaagatacttgaattacactcctctcctctcctcttttatgttaaaatatacactcctctcccttgaaaa 30354518  T
Q  193 gtaaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    ||||| || ||||||  ||| | | |||||| |||||||| |||||    
T  30354517 gtaaatttgatactcatctctcttgtgagatgcttgaatttcaacc 30354472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 31740149 - 31740096
Alignment:
Q  183 cccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaa 236  Q
    ||||||||| |||||||||||||||||||||| ||| |||| ||| ||||||||    
T  31740149 cccttgaaaagtaaaatttatactcccctcccttataagatgcttaaattacaa 31740096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 130 - 236
Target Start/End: Complemental strand, 36016808 - 36016707
Alignment:
Q  130 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 229  Q
    |||||||||||| |||||||    | ||||| |||||||||||||| |   | ||||||||| ||||||||||||||| |||||| ||| |||| |||||    
T  36016808 gcttgaattacaatcccctc----ctctcttatgttaaaatatacactccct-cccttgaaaagtaaaatttatactctcctcccttataagatgcttga 36016714  T
Q  230 attacaa 236  Q
    |||||||    
T  36016713 attacaa 36016707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 238
Target Start/End: Complemental strand, 37872905 - 37872812
Alignment:
Q  145 ccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    |||||||  ||||||| ||||||||||||||||      |||||||| |||||| |||||||||||| || ||| | |||||||||||||||||    
T  37872905 ccctccctcccctcttatgttaaaatatacattccccttccttgaaaagtaaaagttatactcccctaccttataaaatacttgaattacaacc 37872812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 238
Target Start/End: Complemental strand, 11141050 - 11141006
Alignment:
Q  194 taaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||||    
T  11141050 taaaatttatactcccctcccttataagattcttgaattacaacc 11141006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 240
Target Start/End: Original strand, 13439557 - 13439612
Alignment:
Q  184 ccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacctc 240  Q
    ||||||||| ||||||||||||||||||||| ||| ||||  |||||||||||||||    
T  13439557 ccttgaaag-taaaatttatactcccctcccttataagatgtttgaattacaacctc 13439612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 245
Target Start/End: Complemental strand, 37266171 - 37266079
Alignment:
Q  154 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccc-tcccgtatgagatacttgaattacaacctctccct 245  Q
    ||||||| |||||||||||||| |     ||||||||| |||| ||||||||||||| |||| ||| |||| |||||||||||||| ||||||    
T  37266171 ccctcttatgttaaaatatacactccactcccttgaaaagtaagatttatactccccctcccctataagatgcttgaattacaacccctccct 37266079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 238
Target Start/End: Original strand, 40791094 - 40791178
Alignment:
Q  154 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    ||||||| |||||||||||||| |     ||||||||| ||||||||||||||||| |||| ||| ||||  |||||||||||||    
T  40791094 ccctcttatgttaaaatatacactaccctcccttgaaaagtaaaatttatactcccttcccttataagatgtttgaattacaacc 40791178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 4257261 - 4257210
Alignment:
Q  183 cccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattac 234  Q
    ||||||||| ||| |||||||||||||||||| ||||||||  |||||||||    
T  4257261 cccttgaaaagtagaatttatactcccctcccctatgagatgattgaattac 4257210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 17734941 - 17734855
Alignment:
Q  153 tccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacctc 240  Q
    |||||||| ||||||||||||||||     ||||||||| |||||||||||| |||||| || ||| |||| |||| |||||||||||    
T  17734941 tccctcttatgttaaaatatacattcacctcccttgaaaagtaaaatttata-tccccttccttataagatgcttggattacaacctc 17734855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 37836947 - 37837051
Alignment:
Q  130 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 229  Q
    |||||||||||||||||||    || || || ||||||||||||||||     ||||||||| |||||||||||||| | |||||  || |||| |||||    
T  37836947 gcttgaattacactcccct----tctctattatgttaaaatatacattcccctcccttgaaaagtaaaatttatacttctctccccaataagatgcttga 37837042  T
Q  230 attacaacc 238  Q
    |||||||||    
T  37837043 attacaacc 37837051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 238
Target Start/End: Complemental strand, 3940261 - 3940162
Alignment:
Q  135 aattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattac 234  Q
    ||||||||||||||||||||    || | |||||||||||||||||  || |||||| ||||||||||||  | |||  | ||| |||| ||||||||||    
T  3940261 aattacactcccctcccctc----ttatattaaaatatacatttttctcctttgaaaagtaaaatttatatccacctttcctataagatgcttgaattac 3940166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 6293174 - 6293132
Alignment:
Q  194 taaaatttatactcccctcccgtatgagatacttgaattacaa 236  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||    
T  6293174 taaaatttatactcccctcccttataagatgcttgaattacaa 6293132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 14364438 - 14364396
Alignment:
Q  194 taaaatttatactcccctcccgtatgagatacttgaattacaa 236  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||    
T  14364438 taaaatttatactcccctcccttataagatgcttgaattacaa 14364396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 156
Target Start/End: Complemental strand, 40134201 - 40134143
Alignment:
Q  98 agagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccc 156  Q
    ||||||||||||| | | || ||||| | |||||||||||||||||||| |||||||||    
T  40134201 agagtaaattacactcccctcccctatgagaagcttgaattacactcccttcccctccc 40134143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 238
Target Start/End: Original strand, 253571 - 253656
Alignment:
Q  154 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatact-cccctcccgtatgagatacttgaattacaacc 238  Q
    ||||||| |||||||||||||| |  |  ||||||||| |||| ||||||||| |||||||| ||| ||||  |||||||||||||    
T  253571 ccctcttatgttaaaatatacactcctctcccttgaaaagtaagatttatactccccctcccctataagatgattgaattacaacc 253656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 238
Target Start/End: Complemental strand, 662287 - 662202
Alignment:
Q  154 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatact-cccctcccgtatgagatacttgaattacaacc 238  Q
    ||||||| |||||||||||||| |  |  ||||||||| |||| ||||||||| |||||||| ||| ||||  |||||||||||||    
T  662287 ccctcttatgttaaaatatacactcctctcccttgaaaagtaagatttatactccccctcccctataagatgattgaattacaacc 662202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 238
Target Start/End: Complemental strand, 848085 - 848000
Alignment:
Q  154 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatact-cccctcccgtatgagatacttgaattacaacc 238  Q
    ||||||| |||||||||||||| |  |  ||||||||| |||| ||||||||| |||||||| ||| ||||  |||||||||||||    
T  848085 ccctcttatgttaaaatatacactcctctcccttgaaaagtaagatttatactccccctcccctataagatgattgaattacaacc 848000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 17496315 - 17496392
Alignment:
Q  162 tgttaaaatatacattttttccccttgaaaggtaaaatttatact-cccctcccgtatgagatacttgaattacaacc 238  Q
    |||||||||||||| | |   ||||||||| |||| ||||||||| |||||||| ||| |||| ||||||||||||||    
T  17496315 tgttaaaatatacactctcctcccttgaaaagtaagatttatactccccctcccctataagatgcttgaattacaacc 17496392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 237
Target Start/End: Complemental strand, 21304628 - 21304579
Alignment:
Q  188 gaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaac 237  Q
    ||||||||||||||| |||||| |||| ||| |||| |||||||||||||    
T  21304628 gaaaggtaaaatttacactcccatcccttataagattcttgaattacaac 21304579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 154
Target Start/End: Complemental strand, 29636468 - 29636411
Alignment:
Q  97 aagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctc 154  Q
    |||||||||||||| | |||| |||| |  || |||||||||||||||||||||||||    
T  29636468 aagagtaaattacaatcctcttccctcaaagatgcttgaattacactcccctcccctc 29636411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 156
Target Start/End: Original strand, 42198563 - 42198592
Alignment:
Q  127 gaagcttgaattacactcccctcccctccc 156  Q
    ||||||||||||||||||||||||||||||    
T  42198563 gaagcttgaattacactcccctcccctccc 42198592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 238
Target Start/End: Original strand, 44746221 - 44746306
Alignment:
Q  153 tccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    |||||||| ||||||||||||||||     |||||||||  ||||||| ||||| ||||||| ||| ||||  |||||||||||||    
T  44746221 tccctcttatgttaaaatatacattcccctcccttgaaaaataaaattaatacttccctcccctataagatgtttgaattacaacc 44746306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 154
Target Start/End: Complemental strand, 14880269 - 14880213
Alignment:
Q  98 agagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctc 154  Q
    ||||||||||||| | |||| |||| |  || |||||||||||||||||||||||||    
T  14880269 agagtaaattacactcctctcccctcaaagatgcttgaattacactcccctcccctc 14880213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 8e-18; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 102 - 237
Target Start/End: Original strand, 3391755 - 3391886
Alignment:
Q  102 taaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaattt 201  Q
    ||||||||| |||||| ||||||| |||| |||||||||| | | ||||||||    || |||||||||||||| |     ||||| ||| |||||||||    
T  3391755 taaattacacttctcttccctaagagaagtttgaattacatttcactcccctc----ttatgttaaaatatacactcccctcccttaaaaagtaaaattt 3391850  T
Q  202 atactcccctcccgtatgagatacttgaattacaac 237  Q
    ||||||||||||| |||||||| |||||||||||||    
T  3391851 atactcccctcccctatgagatgcttgaattacaac 3391886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 130 - 237
Target Start/End: Complemental strand, 40401600 - 40401497
Alignment:
Q  130 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 229  Q
    |||||||||||||||||||||||||    || |||||||||||||| |   | ||||||||| ||||||||||||||| |||||| ||| |||| |||||    
T  40401600 gcttgaattacactcccctcccctc----ttatgttaaaatatacactcccttcccttgaaaagtaaaatttatactctcctcccttataagatgcttga 40401505  T
Q  230 attacaac 237  Q
    ||||||||    
T  40401504 attacaac 40401497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 238
Target Start/End: Original strand, 5227893 - 5227982
Alignment:
Q  149 cccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    |||||||||||| ||||||||||||||||     ||||| ||| |||||||||||||||||||||| ||| |||| ||||||||||||||    
T  5227893 cccctccctcttatgttaaaatatacattcccctcccttaaaaagtaaaatttatactcccctcccttataagatgcttgaattacaacc 5227982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 240
Target Start/End: Original strand, 23232912 - 23232996
Alignment:
Q  156 ctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacctc 240  Q
    ||||||||||||||||||||||      |||||||| |||||||||||||||||||||  ||| |||| ||||||||||||||||    
T  23232912 ctcttgtgttaaaatatacattccccttccttgaaaagtaaaatttatactcccctcctctataagatgcttgaattacaacctc 23232996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 95 - 238
Target Start/End: Complemental strand, 16426093 - 16425954
Alignment:
Q  95 ttaagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggt 194  Q
    |||||||||||||||| | | || ||||||| || |||| || || |||||| |||||||    || |||||||||||||| |     ||||||||| ||    
T  16426093 ttaagagtaaattacactcccctcccctaagagatgcttcaagtatactcccttcccctc----ttatgttaaaatatacactcccctcccttgaaaagt 16425998  T
Q  195 aaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    || ||||||||||||||||| |||||||| |||||| |||||||    
T  16425997 aatatttatactcccctcccctatgagatgcttgaaatacaacc 16425954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 96 - 235
Target Start/End: Original strand, 22711626 - 22711761
Alignment:
Q  96 taagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggta 195  Q
    ||||||||||||||| | |||| |||| |  || |||||| |||||||| |||||||||    || |||||||||||||| |     | ||||||| |||    
T  22711626 taagagtaaattacactcctcttccctcaaagatgcttgatttacactctcctcccctc----ttatgttaaaatatacactccactctcttgaaaagta 22711721  T
Q  196 aaatttatactcccctcccgtatgagatacttgaattaca 235  Q
    ||||||||||||||||||| ||| |||| |||||||||||    
T  22711722 aaatttatactcccctcccctataagatgcttgaattaca 22711761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 130 - 241
Target Start/End: Complemental strand, 27619682 - 27619575
Alignment:
Q  130 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 229  Q
    |||||||||||||||||||||||||    || |||||||||||||| |  |  ||||| ||| ||||| || ||||||||||||| | |||||| |||||    
T  27619682 gcttgaattacactcccctcccctc----ttatgttaaaatatacactcctctcccttaaaaagtaaatttgatactcccctcccttgtgagatgcttga 27619587  T
Q  230 attacaacctct 241  Q
    ||| ||||||||    
T  27619586 atttcaacctct 27619575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 214
Target Start/End: Complemental strand, 36688906 - 36688828
Alignment:
Q  132 ttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctccc 214  Q
    |||||||||||||||||||||||    || |||||||||||||| |||   ||||||||| |||||| |||||||||||||||    
T  36688906 ttgaattacactcccctcccctc----ttatgttaaaatatacactttcctcccttgaaaagtaaaagttatactcccctccc 36688828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 238
Target Start/End: Original strand, 42813067 - 42813152
Alignment:
Q  153 tccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    |||||||| ||||||||||||||   |   || |||||| |||||||||||||||||||||| ||| |||| ||||||||||||||    
T  42813067 tccctcttatgttaaaatatacacactcctccgttgaaaagtaaaatttatactcccctcccctataagatgcttgaattacaacc 42813152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 48872086 - 48872138
Alignment:
Q  183 cccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattaca 235  Q
    ||||||||| |||||||||||||||||||||| ||| |||| |||||||||||    
T  48872086 cccttgaaaagtaaaatttatactcccctcccatataagatgcttgaattaca 48872138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 11696258 - 11696337
Alignment:
Q  157 tcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaa 236  Q
    |||| |||||||| ||||| |||   || |||||| |||||||||||||||| ||||| |||||||| ||||||||||||    
T  11696258 tcttatgttaaaagatacactttcctccattgaaaagtaaaatttatactcctctcccctatgagatgcttgaattacaa 11696337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 38790098 - 38790202
Alignment:
Q  130 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 229  Q
    ||||||||||||||||||||    ||||||| |||||||||||||| |  |  || |||||| ||||| || ||||||||||||| |||||||  |||||    
T  38790098 gcttgaattacactcccctc----ccctcttatgttaaaatatacactcatctcctttgaaaagtaaagttgatactcccctcccttatgagaagcttga 38790193  T
Q  230 attacaacc 238  Q
    ||| |||||    
T  38790194 atttcaacc 38790202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 245
Target Start/End: Complemental strand, 26200477 - 26200415
Alignment:
Q  183 cccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacctctccct 245  Q
    ||||||||| ||||||||| ||||  |||||| ||| |||| |||||||||||||||||||||    
T  26200477 cccttgaaaagtaaaatttgtactttcctcccttataagatgcttgaattacaacctctccct 26200415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 236
Target Start/End: Original strand, 26902711 - 26902785
Alignment:
Q  162 tgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaa 236  Q
    |||||||||||||| ||||  |||||||||  ||||||||| |||| |||||| ||| |||| ||||||||||||    
T  26902711 tgttaaaatatacacttttctcccttgaaaaataaaatttacactctcctcccctataagatgcttgaattacaa 26902785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 33869947 - 33869890
Alignment:
Q  183 cccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacctc 240  Q
    ||||||||| |||||||||||||||||||| | ||| ||||  |||||||||||||||    
T  33869947 cccttgaaaagtaaaatttatactcccctctcttataagatgtttgaattacaacctc 33869890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 100 - 238
Target Start/End: Complemental strand, 46011198 - 46011064
Alignment:
Q  100 agtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaat 199  Q
    ||||||||||| | |||| |||| |  || |||||||||||||||||||    || ||||| ||||||||||| || |     ||||||||| | |||||    
T  46011198 agtaaattacactcctctcccctcaaagatgcttgaattacactcccct----tctctcttatgttaaaatatgcactcccctcccttgaaaaggaaaat 46011103  T
Q  200 ttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    ||||||||||||||| ||| ||||  |||||||||||||    
T  46011102 ttatactcccctcccctataagatgtttgaattacaacc 46011064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 2146852 - 2146800
Alignment:
Q  194 taaaatttatactcccctcccgtatgagatacttgaattac-aacctctccct 245  Q
    ||||||||||||||||||||| ||| |||| |||||||||| |||||||||||    
T  2146852 taaaatttatactcccctcccttataagatgcttgaattacaaacctctccct 2146800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 11639922 - 11639998
Alignment:
Q  130 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccc 210  Q
    ||||||||||||||||||||    ||||||| |||||||||||||| | |   || |||||| ||||||||||||||||||    
T  11639922 gcttgaattacactcccctc----ccctcttatgttaaaatatacactctcctcctttgaaaagtaaaatttatactcccc 11639998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 29615542 - 29615646
Alignment:
Q  130 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 229  Q
    ||||||||||||||| ||||    ||||||| ||||||||||||||||     ||||| ||| |||||||| |||||||| |||| ||| |||| ||| |    
T  29615542 gcttgaattacactctcctc----ccctcttatgttaaaatatacattcccctcccttaaaaagtaaaattaatactcccttcccttataagatgcttaa 29615637  T
Q  230 attacaacc 238  Q
    |||||||||    
T  29615638 attacaacc 29615646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 151 - 238
Target Start/End: Original strand, 32387523 - 32387610
Alignment:
Q  151 cctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    |||||||||| |||||||||||||| ||    ||||||||| ||||||||||||||||  | || | |||||| |||||||| |||||    
T  32387523 cctccctcttatgttaaaatatacacttccatcccttgaaaagtaaaatttatactccttttccatttgagatgcttgaattgcaacc 32387610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 38987778 - 38987882
Alignment:
Q  130 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 229  Q
    |||||||||| ||||||||||||||    || |||||||||||||| |     | ||||||| |||||||||| ||||||||||| ||| ||||  ||||    
T  38987778 gcttgaattaaactcccctcccctc----ttatgttaaaatatacactccactctcttgaaaagtaaaatttacactcccctcccctataagatgtttga 38987873  T
Q  230 attacaacc 238  Q
    |||||||||    
T  38987874 attacaacc 38987882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 230
Target Start/End: Original strand, 23727822 - 23727887
Alignment:
Q  162 tgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaa 230  Q
    |||||||||||||| || |||   |||||| |||||||||||||||||||||| ||| |||| ||||||    
T  23727822 tgttaaaatatacacttcttc---ttgaaaagtaaaatttatactcccctcccttataagatgcttgaa 23727887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 29736157 - 29736236
Alignment:
Q  130 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcc 213  Q
    |||||||||||||||| ||    |||||||| ||||||||||||||||||   ||||||||| ||||||| || ||||| ||||    
T  29736157 gcttgaattacactccact----tccctcttatgttaaaatatacattttccacccttgaaaagtaaaatctacactcctctcc 29736236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 40344416 - 40344374
Alignment:
Q  194 taaaatttatactcccctcccgtatgagatacttgaattacaa 236  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||    
T  40344416 taaaatttatactcccctcccttataagatgcttgaattacaa 40344374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 235
Target Start/End: Complemental strand, 8123305 - 8123225
Alignment:
Q  154 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattaca 235  Q
    ||||||| |||||||||||||| ||    | |||||||  |||||||||||| |||||||| ||| ||||||||||||||||    
T  8123305 ccctcttatgttaaaatatacacttccctctcttgaaaattaaaatttatac-cccctcccctataagatacttgaattaca 8123225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 19333048 - 19332995
Alignment:
Q  185 cttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    ||||||| |||||||||||||||||||||| ||| |||| |||| | |||||||    
T  19333048 cttgaaaagtaaaatttatactcccctcccctataagatgcttgcactacaacc 19332995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 45941500 - 45941581
Alignment:
Q  156 ctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaac 237  Q
    ||||| |||||||||||| |||  |  || ||| || ||||||| ||||||||| |||| ||| ||||||||||||||||||    
T  45941500 ctcttatgttaaaatatatattcctctcctttgtaaagtaaaatgtatactcccgtcccttataagatacttgaattacaac 45941581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 29824008 - 29823956
Alignment:
Q  194 taaaatttatactcccctcccgtatgagatacttgaattac-aacctctccct 245  Q
    ||||||||||||||||||| | ||| |||| |||||||||| |||||||||||    
T  29824008 taaaatttatactcccctctcttataagatgcttgaattacaaacctctccct 29823956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 34834894 - 34834946
Alignment:
Q  186 ttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    |||||| |||||||||||| ||||||||  ||| |||| ||||||||||||||    
T  34834894 ttgaaaagtaaaatttatattcccctcctttataagatgcttgaattacaacc 34834946  T

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Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 235
Target Start/End: Complemental strand, 36848525 - 36848445
Alignment:
Q  155 cctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattaca 235  Q
    |||||| |||||||||||||| |||   ||||| ||| |||||||||||||| ||||||| ||| | ||  ||||||||||    
T  36848525 cctcttatgttaaaatatacactttcctccctttaaaagtaaaatttatacttccctcccttataaaatgtttgaattaca 36848445  T

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Target: scaffold0159 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 34408 - 34510
Alignment:
Q  130 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 229  Q
    |||||||||||||||||||||      |||| ||||||||||||||||  |  |||||||||  ||||||||||||||||||||| ||| |||| |||||    
T  34408 gcttgaattacactcccctcc------tcttatgttaaaatatacattcctcacccttgaaaaataaaatttatactcccctcccttataagatgcttga 34501  T
Q  230 attacaacc 238  Q
    ||| |||||    
T  34502 attgcaacc 34510  T

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Target: scaffold0068 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 59286 - 59390
Alignment:
Q  130 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 229  Q
    ||||||||||||||| |||||||||    || |||||||||||||| |     ||||||||| |||||||||||||||||||||  ||| |||| |||||    
T  59286 gcttgaattacactctcctcccctc----ttatgttaaaatatacactcccctcccttgaaaagtaaaatttatactcccctcctctataagatgcttga 59381  T
Q  230 attacaacc 238  Q
    |||||||||    
T  59382 attacaacc 59390  T

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Target: scaffold0289 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 130 - 241
Target Start/End: Complemental strand, 4096 - 3990
Alignment:
Q  130 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 229  Q
    |||||||||||||||||||||| ||    || |||||||||||||| ||    |||||||||  |||||||||||| |||||||| ||| ||||||||||    
T  4096 gcttgaattacactcccctcccatc----ttatgttaaaatatacacttccgtcccttgaaaattaaaatttatac-cccctcccctataagatacttga 4002  T
Q  230 attacaacctct 241  Q
    |||||| |||||    
T  4001 attacatcctct 3990  T

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Target: scaffold0003 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 95 - 238
Target Start/End: Complemental strand, 14806 - 14667
Alignment:
Q  95 ttaagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggt 194  Q
    |||||||||||||||| | | || ||||||| || |||| || || |||||| |||||||    || |||||||||||||| |     ||||||||| ||    
T  14806 ttaagagtaaattacactcccctcccctaagagatgcttcaagtatactcccttcccctc----ttatgttaaaatatacactcccctcccttgaaaagt 14711  T
Q  195 aaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    || ||||||||||||||||| |||||||| |||||| |||||||    
T  14710 aatatttatactcccctcccctatgagatgcttgaaatacaacc 14667  T

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Target: scaffold0003; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 95 - 238
Target Start/End: Complemental strand, 28952 - 28813
Alignment:
Q  95 ttaagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggt 194  Q
    |||||||||||||||| | | || ||||||| || |||| || || |||||| |||||||    || |||||||||||||| |     ||||||||| ||    
T  28952 ttaagagtaaattacactcccctcccctaagagatgcttcaagtatactcccttcccctc----ttatgttaaaatatacactcccctcccttgaaaagt 28857  T
Q  195 aaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    || ||||||||||||||||| |||||||| |||||| |||||||    
T  28856 aatatttatactcccctcccctatgagatgcttgaaatacaacc 28813  T

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Target: scaffold0043 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 229
Target Start/End: Original strand, 67730 - 67836
Alignment:
Q  119 ccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtat 218  Q
    ||||||| ||| | ||||||||||||||||||||||    || || ||||||||||| ||||  || |||||| |||||||||||||||| ||||| |||    
T  67730 ccctaagagaaacatgaattacactcccctcccctc----ttatgataaaatatacacttttctcctttgaaaagtaaaatttatactccactcccatat 67825  T
Q  219 gagatacttga 229  Q
     |||| |||||    
T  67826 aagatgcttga 67836  T

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Target: scaffold0971 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0971
Description:

Target: scaffold0971; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 3174 - 3231
Alignment:
Q  183 cccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacctc 240  Q
    ||||||||| |||||||| ||||||||||||| |||||||| ||| |||| |||||||    
T  3174 cccttgaaaagtaaaattgatactcccctcccttatgagatgcttaaatttcaacctc 3231  T

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Target: scaffold0189 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 238
Target Start/End: Original strand, 11335 - 11419
Alignment:
Q  154 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 238  Q
    ||||||| |||||||||||||| |     ||||||||| |||||||||| |||||| |||| ||| |||| ||||||||||||||    
T  11335 ccctcttatgttaaaatatacactcccctcccttgaaaagtaaaatttacactcccttcccctataagatgcttgaattacaacc 11419  T

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Target: scaffold0004 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 236
Target Start/End: Original strand, 351316 - 351396
Alignment:
Q  156 ctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaa 236  Q
    ||||| |||||||||||||| ||    |||||||||  ||| ||||||||||||||||| ||| |||| ||||||||||||    
T  351316 ctcttatgttaaaatatacacttcactcccttgaaaaataacatttatactcccctcccctataagatgcttgaattacaa 351396  T

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Target: scaffold0051 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 11627 - 11573
Alignment:
Q  185 cttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacctc 240  Q
    ||||||| ||||||||||||| |||||||| ||| |||| ||||||||||||||||    
T  11627 cttgaaaagtaaaatttatac-cccctcccctataagatgcttgaattacaacctc 11573  T

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Target: scaffold0067 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 18721 - 18679
Alignment:
Q  194 taaaatttatactcccctcccgtatgagatacttgaattacaa 236  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||    
T  18721 taaaatttatactcccctcccttataagatgcttgaattacaa 18679  T

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Target: scaffold0036 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 25295 - 25335
Alignment:
Q  183 cccttgaaaggtaaaatttatactcccctcccgtatgagat 223  Q
    ||||||||| |||||||||||||||||||||| ||| ||||    
T  25295 cccttgaaaagtaaaatttatactcccctcccctataagat 25335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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