View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12750_low_2 (Length: 495)

Name: NF12750_low_2
Description: NF12750
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12750_low_2
NF12750_low_2
[»] scaffold0401 (1 HSPs)
scaffold0401 (46-220)||(8727-8899)
[»] chr5 (13 HSPs)
chr5 (46-220)||(14025781-14025953)
chr5 (48-220)||(8833182-8833352)
chr5 (59-220)||(8503875-8504034)
chr5 (71-220)||(26762308-26762455)
chr5 (46-220)||(26749938-26750109)
chr5 (46-173)||(1626892-1627017)
chr5 (68-170)||(21504096-21504195)
chr5 (319-410)||(23374572-23374666)
chr5 (121-164)||(24068191-24068234)
chr5 (59-88)||(19921680-19921709)
chr5 (46-82)||(660830-660866)
chr5 (59-87)||(21398631-21398659)
chr5 (68-131)||(21404080-21404141)
[»] chr1 (20 HSPs)
chr1 (46-220)||(14792537-14792709)
chr1 (46-220)||(18121509-18121681)
chr1 (46-212)||(38887061-38887225)
chr1 (46-220)||(44892355-44892527)
chr1 (59-220)||(41225441-41225600)
chr1 (59-220)||(41226694-41226853)
chr1 (61-154)||(21243746-21243838)
chr1 (69-172)||(39061275-39061375)
chr1 (68-179)||(21188030-21188138)
chr1 (178-220)||(21243841-21243883)
chr1 (68-184)||(11808187-11808288)
chr1 (154-220)||(8306510-8306577)
chr1 (177-220)||(17901905-17901948)
chr1 (121-164)||(40390112-40390155)
chr1 (177-221)||(6834074-6834118)
chr1 (46-178)||(24719485-24719615)
chr1 (177-220)||(21239146-21239189)
chr1 (297-373)||(16025342-16025420)
chr1 (115-178)||(12710814-12710877)
chr1 (59-87)||(16058301-16058329)
[»] chr3 (18 HSPs)
chr3 (60-220)||(53646047-53646205)
chr3 (88-220)||(54330321-54330453)
chr3 (120-220)||(14152446-14152546)
chr3 (121-220)||(5215552-5215651)
chr3 (68-179)||(21845648-21845756)
chr3 (68-170)||(48631288-48631387)
chr3 (277-411)||(511652-511789)
chr3 (152-220)||(15566418-15566486)
chr3 (59-163)||(15566706-15566809)
chr3 (59-124)||(50350803-50350866)
chr3 (68-179)||(3160623-3160731)
chr3 (443-490)||(511880-511929)
chr3 (401-446)||(511825-511870)
chr3 (48-104)||(11563747-11563801)
chr3 (177-220)||(45803440-45803483)
chr3 (319-359)||(10289882-10289923)
chr3 (59-87)||(14641535-14641563)
chr3 (59-87)||(49900767-49900795)
[»] chr6 (17 HSPs)
chr6 (46-220)||(7217218-7217389)
chr6 (48-220)||(22557154-22557323)
chr6 (59-220)||(23431434-23431593)
chr6 (46-220)||(18455047-18455219)
chr6 (59-220)||(25921907-25922066)
chr6 (71-220)||(31734613-31734760)
chr6 (68-220)||(32259751-32259901)
chr6 (115-220)||(23657994-23658099)
chr6 (68-170)||(1818909-1819008)
chr6 (68-149)||(25601326-25601406)
chr6 (62-136)||(31166230-31166302)
chr6 (68-179)||(18459253-18459362)
chr6 (177-220)||(29045170-29045213)
chr6 (63-107)||(13285767-13285809)
chr6 (101-170)||(18982371-18982439)
chr6 (55-87)||(21683058-21683090)
chr6 (115-179)||(24506157-24506220)
[»] chr4 (22 HSPs)
chr4 (46-220)||(19565892-19566064)
chr4 (61-220)||(33243283-33243440)
chr4 (61-220)||(40230212-40230369)
chr4 (46-220)||(12623222-12623394)
chr4 (46-220)||(46741105-46741277)
chr4 (68-220)||(44023599-44023749)
chr4 (115-220)||(33186808-33186913)
chr4 (126-220)||(12424345-12424439)
chr4 (68-220)||(18462929-18463079)
chr4 (277-373)||(355687-355784)
chr4 (68-170)||(14477588-14477687)
chr4 (46-135)||(26921483-26921570)
chr4 (443-490)||(355500-355547)
chr4 (49-170)||(2424364-2424483)
chr4 (443-490)||(12319050-12319097)
chr4 (68-170)||(13165089-13165188)
chr4 (87-135)||(45314096-45314144)
chr4 (154-220)||(16296777-16296844)
chr4 (48-115)||(26014295-26014360)
chr4 (59-148)||(9638987-9639075)
chr4 (121-164)||(20150787-20150830)
chr4 (401-441)||(355562-355602)
[»] scaffold0439 (1 HSPs)
scaffold0439 (46-220)||(4327-4499)
[»] scaffold0385 (1 HSPs)
scaffold0385 (46-220)||(251-423)
[»] scaffold0039 (1 HSPs)
scaffold0039 (46-220)||(9902-10074)
[»] scaffold0630 (1 HSPs)
scaffold0630 (68-220)||(8969-9119)
[»] chr8 (18 HSPs)
chr8 (46-220)||(22474662-22474834)
chr8 (46-220)||(17978390-17978562)
chr8 (59-220)||(12037151-12037310)
chr8 (59-220)||(21579193-21579352)
chr8 (59-220)||(29762855-29763014)
chr8 (71-220)||(41680132-41680279)
chr8 (59-220)||(22208174-22208334)
chr8 (49-199)||(36405109-36405257)
chr8 (59-220)||(22258293-22258453)
chr8 (68-164)||(20879435-20879528)
chr8 (48-170)||(4380593-4380713)
chr8 (48-87)||(20022016-20022055)
chr8 (68-118)||(20517032-20517080)
chr8 (121-164)||(22966772-22966815)
chr8 (46-87)||(5761570-5761611)
chr8 (126-164)||(21697512-21697550)
chr8 (46-84)||(36732386-36732424)
chr8 (46-87)||(21514728-21514769)
[»] scaffold0020 (1 HSPs)
scaffold0020 (71-220)||(174127-174274)
[»] chr7 (15 HSPs)
chr7 (68-220)||(14317978-14318128)
chr7 (59-220)||(14160843-14161002)
chr7 (88-220)||(9743093-9743225)
chr7 (71-220)||(15119306-15119453)
chr7 (59-220)||(43276731-43276890)
chr7 (126-217)||(8513806-8513898)
chr7 (68-148)||(42565829-42565907)
chr7 (68-182)||(33060383-33060494)
chr7 (49-170)||(4690640-4690759)
chr7 (46-170)||(43745612-43745734)
chr7 (126-173)||(8488147-8488194)
chr7 (47-84)||(48212702-48212739)
chr7 (59-87)||(58400-58428)
chr7 (59-87)||(12127150-12127178)
chr7 (59-87)||(19195648-19195676)
[»] scaffold0063 (1 HSPs)
scaffold0063 (68-220)||(62624-62774)
[»] chr2 (19 HSPs)
chr2 (73-220)||(23968624-23968769)
chr2 (59-220)||(14179715-14179874)
chr2 (59-220)||(14183453-14183612)
chr2 (76-220)||(24717925-24718067)
chr2 (68-153)||(19647206-19647289)
chr2 (68-182)||(20005967-20006078)
chr2 (68-170)||(28652548-28652648)
chr2 (68-148)||(45535903-45535981)
chr2 (443-490)||(27609193-27609240)
chr2 (319-411)||(43938684-43938779)
chr2 (154-220)||(149585-149652)
chr2 (91-170)||(25584280-25584358)
chr2 (72-135)||(12626427-12626488)
chr2 (177-220)||(12626535-12626578)
chr2 (46-87)||(23610663-23610704)
chr2 (59-87)||(17307523-17307551)
chr2 (59-87)||(21369330-21369358)
chr2 (59-87)||(22502008-22502036)
chr2 (59-87)||(22509942-22509970)
[»] scaffold0011 (1 HSPs)
scaffold0011 (46-220)||(33360-33532)
[»] scaffold0371 (2 HSPs)
scaffold0371 (71-220)||(10445-10592)
scaffold0371 (71-148)||(3853-3927)
[»] scaffold0048 (1 HSPs)
scaffold0048 (47-220)||(56882-57050)
[»] scaffold0431 (1 HSPs)
scaffold0431 (126-220)||(5536-5630)
[»] scaffold0108 (1 HSPs)
scaffold0108 (46-220)||(6322-6496)
[»] scaffold1437 (1 HSPs)
scaffold1437 (101-220)||(321-440)
[»] scaffold1160 (1 HSPs)
scaffold1160 (127-220)||(590-683)
[»] scaffold0121 (1 HSPs)
scaffold0121 (126-220)||(20105-20199)
[»] scaffold0092 (1 HSPs)
scaffold0092 (68-220)||(38438-38588)
[»] scaffold0021 (3 HSPs)
scaffold0021 (158-220)||(169346-169408)
scaffold0021 (66-153)||(17078-17163)
scaffold0021 (66-153)||(26609-26694)
[»] scaffold0217 (1 HSPs)
scaffold0217 (68-153)||(28686-28769)
[»] scaffold0165 (2 HSPs)
scaffold0165 (66-179)||(31877-31987)
scaffold0165 (72-136)||(32038-32100)
[»] scaffold0261 (1 HSPs)
scaffold0261 (46-169)||(6394-6514)
[»] scaffold0337 (1 HSPs)
scaffold0337 (68-179)||(3152-3260)
[»] scaffold0017 (1 HSPs)
scaffold0017 (68-179)||(23561-23669)
[»] scaffold0103 (2 HSPs)
scaffold0103 (277-373)||(30436-30532)
scaffold0103 (443-489)||(30261-30307)
[»] scaffold1939 (1 HSPs)
scaffold1939 (70-215)||(38-181)
[»] scaffold0394 (1 HSPs)
scaffold0394 (68-179)||(7510-7618)
[»] scaffold0058 (1 HSPs)
scaffold0058 (68-179)||(59652-59760)
[»] scaffold1102 (1 HSPs)
scaffold1102 (68-152)||(1947-2029)
[»] scaffold0125 (1 HSPs)
scaffold0125 (61-148)||(28528-28614)
[»] scaffold1800 (1 HSPs)
scaffold1800 (68-182)||(552-663)
[»] scaffold1256 (1 HSPs)
scaffold1256 (46-148)||(2174-2275)
[»] scaffold0516 (2 HSPs)
scaffold0516 (46-148)||(5279-5380)
scaffold0516 (46-87)||(5182-5223)
[»] scaffold0213 (1 HSPs)
scaffold0213 (59-176)||(19157-19272)
[»] scaffold0145 (1 HSPs)
scaffold0145 (121-164)||(8086-8129)
[»] scaffold0120 (1 HSPs)
scaffold0120 (121-164)||(29273-29316)
[»] scaffold0059 (1 HSPs)
scaffold0059 (68-170)||(49686-49785)
[»] scaffold0016 (1 HSPs)
scaffold0016 (319-410)||(17799-17893)
[»] scaffold0300 (1 HSPs)
scaffold0300 (297-373)||(14015-14092)
[»] scaffold0203 (1 HSPs)
scaffold0203 (59-170)||(17927-18036)
[»] scaffold0004 (1 HSPs)
scaffold0004 (46-87)||(328262-328303)
[»] scaffold0628 (1 HSPs)
scaffold0628 (48-87)||(1034-1073)
[»] scaffold0594 (1 HSPs)
scaffold0594 (177-220)||(2146-2189)
[»] scaffold0485 (1 HSPs)
scaffold0485 (383-422)||(4457-4496)
[»] scaffold0056 (1 HSPs)
scaffold0056 (46-84)||(18315-18353)
[»] scaffold0555 (1 HSPs)
scaffold0555 (48-84)||(8722-8758)
[»] scaffold0328 (1 HSPs)
scaffold0328 (59-87)||(18627-18655)


Alignment Details
Target: scaffold0401 (Bit Score: 136; Significance: 1e-70; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 46 - 220
Target Start/End: Complemental strand, 8899 - 8727
Alignment:
Q  46 cggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagtt 145  Q
    |||||||| ||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |    
T  8899 cggtagaaccttgcgatcatctaacctaaggtaagggtggga--ctaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagat 8802  T
Q  146 gttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8801 gttaatcggttttgatgttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 8727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 136; Significance: 1e-70; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 46 - 220
Target Start/End: Original strand, 14025781 - 14025953
Alignment:
Q  46 cggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagtt 145  Q
    |||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  14025781 cggtagaaccttgcgatcatctaatctaaggtaagggtggga--ctaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagtt 14025878  T
Q  146 gttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    |||||||| ||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  14025879 gttaatagattttgatgttgtataattagggtttgaaactacaattgatcgtagaaagagtagataatccgatga 14025953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 48 - 220
Target Start/End: Original strand, 8833182 - 8833352
Alignment:
Q  48 gtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgt 147  Q
    |||||| ||||||||||||||| ||| |||||||||||||  || |||||||||||||||||||||||||||||||| |||||||||| ||| |||||||    
T  8833182 gtagaaccttgcgatcatctaacctagggtaagggtggga--ctgaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttatagttgt 8833279  T
Q  148 taataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  8833280 taataggttttgatgttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatctgatga 8833352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 59 - 220
Target Start/End: Original strand, 8503875 - 8504034
Alignment:
Q  59 cgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggtttt 158  Q
    |||| ||||||| ||||||||||||||||  ||||||||||| ||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||    
T  8503875 cgattatctaatataaggtaagggtggga--ctaaccttcttcaatcataagtatgtaatcctgaacaagagtttaaccttgtagttgttaataggtttt 8503972  T
Q  159 gatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8503973 gatgttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 8504034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 71 - 220
Target Start/End: Complemental strand, 26762455 - 26762308
Alignment:
Q  71 ctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaa 170  Q
    |||||||||||||||||  |||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  26762455 ctaaggtaagggtggga--ctaaccttctttaatcataattatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaa 26762358  T
Q  171 ttaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    ||| ||||||||||||||||||||||||||||||||| ||||| ||||||    
T  26762357 ttagggtttgaaactaaaattgatcgtagaaagagtaaataattcgatga 26762308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 46 - 220
Target Start/End: Complemental strand, 26750109 - 26749938
Alignment:
Q  46 cggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagtt 145  Q
    |||||||| ||||||||||||||| ||||||||||||||  ||||||||||| ||||||||||||||| |||||||||| | |||||||| |||||||||    
T  26750109 cggtagaaccttgcgatcatctaacctaaggtaagggtg--agactaaccttttttaatcataagtatataatcctgaaaaggggtttaaccttgtagtt 26750012  T
Q  146 gttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    ||||||| ||||||||||||||||||| ||| || ||||||||||||||| ||||||||||||||||||||||||    
T  26750011 gttaataagttttgatgttgtagaatt-agggttaaaactaaaattgatcatagaaagagtagataatccgatga 26749938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 46 - 173
Target Start/End: Original strand, 1626892 - 1627017
Alignment:
Q  46 cggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagtt 145  Q
    |||||||| |||||||| |||||| |||||||||||||| ||  ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  1626892 cggtagaaccttgcgattatctaacctaaggtaagggtgtga--ctaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagtt 1626989  T
Q  146 gttaataggttttgatgttgtagaatta 173  Q
    |||||||||||||||||||||| |||||    
T  1626990 gttaataggttttgatgttgtaaaatta 1627017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 68 - 170
Target Start/End: Complemental strand, 21504195 - 21504096
Alignment:
Q  68 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 167  Q
    |||||||||||| |||||||  |||||||||||||||||||||||| |  | ||||| ||||||||||  |||||||||||| || ||||||||||| ||    
T  21504195 aatctaaggtaaaggtggga--ctaaccttctttaatcataagtatatggttctgaaaaagggtttaagtttgtagttgttagta-gttttgatgttata 21504099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 319 - 410
Target Start/End: Original strand, 23374572 - 23374666
Alignment:
Q  319 gattaactaggcgtaaatgattaatc-tctcaaatgctaattgtgctaaatga--agttgctacttatttgatgtggtaaatgtttgatgatgat 410  Q
    ||||||||||| |||||||||||||| ||| |||||||| || ||||||||||  |  || |  || ||||||||||||||||||||||||||||    
T  23374572 gattaactaggtgtaaatgattaatcgtctaaaatgctatttttgctaaatgaacatatgttgattctttgatgtggtaaatgtttgatgatgat 23374666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 121 - 164
Target Start/End: Complemental strand, 24068234 - 24068191
Alignment:
Q  121 tgaagaagggtttaatcttgtagttgttaataggttttgatgtt 164  Q
    |||| |||||||||| ||||||||||||||||||||||||||||    
T  24068234 tgaaaaagggtttaaccttgtagttgttaataggttttgatgtt 24068191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 88
Target Start/End: Complemental strand, 19921709 - 19921680
Alignment:
Q  59 cgatcatctaatctaaggtaagggtgggag 88  Q
    ||||||||||||||||||||||||||||||    
T  19921709 cgatcatctaatctaaggtaagggtgggag 19921680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 82
Target Start/End: Complemental strand, 660866 - 660830
Alignment:
Q  46 cggtagaatcttgcgatcatctaatctaaggtaaggg 82  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  660866 cggtagaaccttgcgatcatctaacctaaggtaaggg 660830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 21398631 - 21398659
Alignment:
Q  59 cgatcatctaatctaaggtaagggtggga 87  Q
    |||||||||||||||||||||||||||||    
T  21398631 cgatcatctaatctaaggtaagggtggga 21398659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 131
Target Start/End: Complemental strand, 21404141 - 21404080
Alignment:
Q  68 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggt 131  Q
    |||||||||||||| |||||  |||||||||||||||||| ||| | |||| ||||| ||||||    
T  21404141 aatctaaggtaaggatggga--ctaaccttctttaatcatgagtctataattctgaaaaagggt 21404080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 136; Significance: 1e-70; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 46 - 220
Target Start/End: Original strand, 14792537 - 14792709
Alignment:
Q  46 cggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagtt 145  Q
    |||||||| ||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  14792537 cggtagaaccttgcgatcatctaacctaaggtaagggtggga--ctaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagtt 14792634  T
Q  146 gttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  14792635 gttaataggtttcgatgttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatctgatga 14792709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 46 - 220
Target Start/End: Complemental strand, 18121681 - 18121509
Alignment:
Q  46 cggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagtt 145  Q
    |||||||| ||||||||||||||| |||||||||||||||||   |||||||||||||||||||||||||||||||||| |||| ||||| |||||||||    
T  18121681 cggtagaaccttgcgatcatctaacctaaggtaagggtgggat--taaccttctttaatcataagtatgtaatcctgaaaaaggatttaaccttgtagtt 18121584  T
Q  146 gttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  18121583 gttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtaaaaagagtagataatccgatga 18121509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 46 - 212
Target Start/End: Original strand, 38887061 - 38887225
Alignment:
Q  46 cggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagtt 145  Q
    |||||||| |||| |||||||||| ||||||||||||||  | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  38887061 cggtagaaacttgtgatcatctaacctaaggtaagggtg--aaactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaatcttgtagtt 38887158  T
Q  146 gttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataa 212  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  38887159 gttaataggttttgatgttgtagaattagggtttgaaactaaaagtgatcgtagaaagagtagataa 38887225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 46 - 220
Target Start/End: Complemental strand, 44892527 - 44892355
Alignment:
Q  46 cggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagtt 145  Q
    |||||||| ||||||||||||||| ||||| |||||||||||  |||||||||||||||||||||||||||||| |||| |||| ||||| |||||||||    
T  44892527 cggtagaaccttgcgatcatctaacctaagttaagggtggga--ctaaccttctttaatcataagtatgtaatcttgaaaaaggatttaaccttgtagtt 44892430  T
Q  146 gttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  44892429 gttaataggttttgatattgtagaattagggtttgaaactaaaattgattgtagaaagagtagataatccgatga 44892355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 59 - 220
Target Start/End: Original strand, 41225441 - 41225600
Alignment:
Q  59 cgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggtttt 158  Q
    |||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||| |||||||||||    
T  41225441 cgatcatctaatttaaggtaagggtggga--ctaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgcagttgataataggtttt 41225538  T
Q  159 gatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    ||||||||||| ||| |||||||||||||||||||  |||||||||||||||||||||||||    
T  41225539 gatgttgtagagttagggtttgaaactaaaattgaatgtagaaagagtagataatccgatga 41225600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 59 - 220
Target Start/End: Original strand, 41226694 - 41226853
Alignment:
Q  59 cgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggtttt 158  Q
    |||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||| |||||||||||    
T  41226694 cgatcatctaatttaaggtaagggtggga--ctaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgcagttgataataggtttt 41226791  T
Q  159 gatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    ||||||||||| ||| |||||||||||||||||||  |||||||||||||||||||||||||    
T  41226792 gatgttgtagagttagggtttgaaactaaaattgaatgtagaaagagtagataatccgatga 41226853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 61 - 154
Target Start/End: Original strand, 21243746 - 21243838
Alignment:
Q  61 atcatctaatctaagg-taagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaatagg 154  Q
    |||||||||||||||| ||||||||  ||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||    
T  21243746 atcatctaatctaagggtaagggtg--agactaaccttctttaatcataaatatgtaatcctgaaaaagggtttaaccttgtagttgttaatagg 21243838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 69 - 172
Target Start/End: Complemental strand, 39061375 - 39061275
Alignment:
Q  69 atctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtag 168  Q
    |||||||||||| ||||||  |||||||||| ||||||| ||||| |||| ||||| || ||||||| |||||||||||| ||| ||||||||||| |||    
T  39061375 atctaaggtaagagtggga--ctaaccttctgtaatcatgagtatataattctgaaaaaaggtttaaccttgtagttgttgata-gttttgatgttatag 39061279  T
Q  169 aatt 172  Q
    ||||    
T  39061278 aatt 39061275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 68 - 179
Target Start/End: Original strand, 21188030 - 21188138
Alignment:
Q  68 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 167  Q
    ||||||||||||||||||||  |||||||| ||||||||| ||||| ||||  |||  |||| |||||| ||||||||||| ||| ||||||||||| ||    
T  21188030 aatctaaggtaagggtggga--ctaaccttttttaatcatgagtatataattttgagaaaggatttaattttgtagttgttgata-gttttgatgttata 21188126  T
Q  168 gaattaaggttt 179  Q
    ||| | ||||||    
T  21188127 gaagttaggttt 21188138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 178 - 220
Target Start/End: Original strand, 21243841 - 21243883
Alignment:
Q  178 ttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  21243841 ttgaaactaaaattgattgtagaaagagtagataatccgatga 21243883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 11808187 - 11808288
Alignment:
Q  68 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 167  Q
    |||| ||||||||||||  |||||||||||||||||||||||||||||||             ||||| ||||||||||||||||||||||||||||  |    
T  11808187 aatccaaggtaagggtg--agactaaccttctttaatcataagtatgtaa-------------tttaaccttgtagttgttaataggttttgatgtttca 11808271  T
Q  168 gaattaaggtttgaaac 184  Q
    |||||| | ||||||||    
T  11808272 gaattaggatttgaaac 11808288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 8306577 - 8306510
Alignment:
Q  154 gttttgatgttgtagaa-ttaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    ||||||||||| ||||| ||| ||||||||| |||||||||| || |||||||||| |||||||||||    
T  8306577 gttttgatgttatagaaattagggtttgaaattaaaattgattgttgaaagagtaggtaatccgatga 8306510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 177 - 220
Target Start/End: Original strand, 17901905 - 17901948
Alignment:
Q  177 tttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    |||||||||||||||||| || ||||||||||||||||||||||    
T  17901905 tttgaaactaaaattgattgttgaaagagtagataatccgatga 17901948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 121 - 164
Target Start/End: Complemental strand, 40390155 - 40390112
Alignment:
Q  121 tgaagaagggtttaatcttgtagttgttaataggttttgatgtt 164  Q
    |||| |||||||||| ||||||||||||||||||||||||||||    
T  40390155 tgaaaaagggtttaaccttgtagttgttaataggttttgatgtt 40390112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 6834118 - 6834074
Alignment:
Q  177 tttgaaactaaaattgatcgtagaaagagtagataatccgatgat 221  Q
    |||||||||||||||||| || |||||||||| ||||||||||||    
T  6834118 tttgaaactaaaattgattgttgaaagagtaggtaatccgatgat 6834074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 178
Target Start/End: Original strand, 24719485 - 24719615
Alignment:
Q  46 cggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagta-tgtaatcctgaagaagggtttaatcttgtagt 144  Q
    |||||||| ||||||||||||||| ||| |||||||||||   |||| | |||| |||| ||  ||  | |||| ||||| |||||||||| ||||||||    
T  24719485 cggtagaaccttgcgatcatctaacctatggtaagggtgg---actagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagt 24719581  T
Q  145 tgttaataggttttgatgttgtag-aattaaggtt 178  Q
    ||||| || ||||||||||| ||| ||||||||||    
T  24719582 tgttatta-gttttgatgttatagaaattaaggtt 24719615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 220
Target Start/End: Original strand, 21239146 - 21239189
Alignment:
Q  177 tttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    |||||||||||||||||| || |||||||||| |||||||||||    
T  21239146 tttgaaactaaaattgattgttgaaagagtaggtaatccgatga 21239189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 297 - 373
Target Start/End: Complemental strand, 16025420 - 16025342
Alignment:
Q  297 tgatatgtatacatgaaaagtggattaactaggcgtaaatgattaatc-tctc-aaatgctaattgtgctaaatgaagt 373  Q
    ||||||||| || ||||| ||||||||  |||| |||||||||||||| |||| |||||||||||||  ||||||||||    
T  16025420 tgatatgtaaacttgaaatgtggattagttaggtgtaaatgattaatcatctcaaaatgctaattgtattaaatgaagt 16025342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 178
Target Start/End: Complemental strand, 12710877 - 12710814
Alignment:
Q  115 taatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtag-aattaaggtt 178  Q
    |||| ||||| |||||||||||||||||||||||  || ||||||||||| ||| ||||||||||    
T  12710877 taattctgaaaaagggtttaatcttgtagttgttgtta-gttttgatgttatagaaattaaggtt 12710814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 16058301 - 16058329
Alignment:
Q  59 cgatcatctaatctaaggtaagggtggga 87  Q
    |||||||||||||||||||||||||||||    
T  16058301 cgatcatctaatctaaggtaagggtggga 16058329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 134; Significance: 2e-69; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 60 - 220
Target Start/End: Original strand, 53646047 - 53646205
Alignment:
Q  60 gatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttg 159  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||    
T  53646047 gatcatctaatctaaggtaagggtggga--ctaaccttctttaatcataaatatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttg 53646144  T
Q  160 atgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  53646145 atgttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 53646205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 88 - 220
Target Start/End: Original strand, 54330321 - 54330453
Alignment:
Q  88 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 187  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  54330321 gactaactttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaa 54330420  T
Q  188 aattgatcgtagaaagagtagataatccgatga 220  Q
    |||||||||||||||||||||||||||||||||    
T  54330421 aattgatcgtagaaagagtagataatccgatga 54330453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 14152446 - 14152546
Alignment:
Q  120 ctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatg 219  Q
    ||||| |||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||    
T  14152446 ctgaaaaagggtttaaccttgtagttgttagtaggttttgatgttgtagaattagggtttgaaactaaaattgattgtataaagagtagataatccgatg 14152545  T
Q  220 a 220  Q
    |    
T  14152546 a 14152546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 121 - 220
Target Start/End: Complemental strand, 5215651 - 5215552
Alignment:
Q  121 tgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    |||| |||||||||| ||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||||    
T  5215651 tgaaaaagggtttaaccttgtagttattaataggttttgatgttgtagaattagggtttaaaactaaaattgattgtagatagagtagataatccgatga 5215552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 68 - 179
Target Start/End: Original strand, 21845648 - 21845756
Alignment:
Q  68 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 167  Q
    ||||||||||||||||||||  |||||||||||||||||||||||| || | ||||| |||||||||| |||||||||||||||| ||||||||||| ||    
T  21845648 aatctaaggtaagggtggga--ctaaccttctttaatcataagtatatagttctgaaaaagggtttaagcttgtagttgttaata-gttttgatgttata 21845744  T
Q  168 gaattaaggttt 179  Q
    ||| | ||||||    
T  21845745 gaaattaggttt 21845756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 68 - 170
Target Start/End: Complemental strand, 48631387 - 48631288
Alignment:
Q  68 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 167  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||| || | ||||| |||||||||| |||||||||||||||| ||||||||||| ||    
T  48631387 aatctaaggtaagggtggga--ctaaccttctttaatcataaatatatagttctgaaaaagggtttaagcttgtagttgttaata-gttttgatgttata 48631291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 277 - 411
Target Start/End: Original strand, 511652 - 511789
Alignment:
Q  277 aatgatgattgatttggctatgatatgtatacatgaaaagtggattaactaggcgtaaatgattaatc-tctcaaatgctaattgtgctaaatgaagt-- 373  Q
    |||||||||| |||| ||||||||||| |||| ||||| |||||||| |||| ||||||||||||||| | ||||| |||||||||||||||||||||      
T  511652 aatgatgattaatttagctatgatatgcatacttgaaatgtggattagctagacgtaaatgattaatcgtttcaaaggctaattgtgctaaatgaagtga 511751  T
Q  374 tgctacttatttgatgtggtaaatgtttgatgatgatt 411  Q
    || ||| || ||||||  ||| |||||| |||||||||    
T  511752 tgttacctacttgatgaagtatatgttttatgatgatt 511789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 152 - 220
Target Start/End: Complemental strand, 15566486 - 15566418
Alignment:
Q  152 aggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    |||||||||||| ||| ||||| ||||| |||||||||||||||||||||| ||||||||||| |||||    
T  15566486 aggttttgatgtggtaaaattagggtttaaaactaaaattgatcgtagaaatagtagataatctgatga 15566418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 59 - 163
Target Start/End: Complemental strand, 15566809 - 15566706
Alignment:
Q  59 cgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagta-tgtaatcctgaagaagggtttaatcttgtagttgttaataggttt 157  Q
    ||||||| |||||||| ||||||||||||  ||||| |||| ||||  |||||  | |||| ||||| |||||||||| |||||||||||||||||||||    
T  15566809 cgatcatgtaatctaaagtaagggtggga--ctaactttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagttgttaataggttt 15566712  T
Q  158 tgatgt 163  Q
    ||||||    
T  15566711 tgatgt 15566706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 59 - 124
Target Start/End: Original strand, 50350803 - 50350866
Alignment:
Q  59 cgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaa 124  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||| ||||| |||| |||||    
T  50350803 cgatcatctaatctaaggtaagggtgg--gactaaccttctttaatcatgagtatataattctgaa 50350866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 68 - 179
Target Start/End: Original strand, 3160623 - 3160731
Alignment:
Q  68 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 167  Q
    |||||||||||||||||  ||||||||||||||||||||| ||||| |||| || || | ||||||||  ||||||||||| ||| |||||||| || ||    
T  3160623 aatctaaggtaagggtg--agactaaccttctttaatcatgagtatataattctaaaaatgggtttaactttgtagttgttgata-gttttgatattata 3160719  T
Q  168 gaattaaggttt 179  Q
    ||| | ||||||    
T  3160720 gaaattaggttt 3160731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 443 - 490
Target Start/End: Original strand, 511880 - 511929
Alignment:
Q  443 gatgttgactagtgacgatgaaa--atatatatgtataaagtgatgatgt 490  Q
    |||||||||||||||||||||||  ||||||||||||||||||| |||||    
T  511880 gatgttgactagtgacgatgaaaatatatatatgtataaagtgacgatgt 511929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 446
Target Start/End: Original strand, 511825 - 511870
Alignment:
Q  401 tgatgatgatttttgatgatgagtatacatatataaagtgacgatg 446  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||    
T  511825 tgatggtgattttttatgacgagtatacatatataaagtgacgatg 511870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 48 - 104
Target Start/End: Complemental strand, 11563801 - 11563747
Alignment:
Q  48 gtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaat 104  Q
    |||||| ||| |||||||||||||||||||||||||||  |||||||||||| ||||    
T  11563801 gtagaaccttccgatcatctaatctaaggtaagggtgg--gactaaccttctctaat 11563747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 220
Target Start/End: Original strand, 45803440 - 45803483
Alignment:
Q  177 tttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    |||||||||||||||||| || |||||||||| |||||||||||    
T  45803440 tttgaaactaaaattgattgttgaaagagtaggtaatccgatga 45803483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 359
Target Start/End: Complemental strand, 10289923 - 10289882
Alignment:
Q  319 gattaactaggcgtaaatgattaatc-tctcaaatgctaatt 359  Q
    |||||||||||||||||||||||||| ||||| |||||||||    
T  10289923 gattaactaggcgtaaatgattaatcatctcacatgctaatt 10289882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 14641535 - 14641563
Alignment:
Q  59 cgatcatctaatctaaggtaagggtggga 87  Q
    |||||||||||||||||||||||||||||    
T  14641535 cgatcatctaatctaaggtaagggtggga 14641563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 49900795 - 49900767
Alignment:
Q  59 cgatcatctaatctaaggtaagggtggga 87  Q
    |||||||||||||||||||||||||||||    
T  49900795 cgatcatctaatctaaggtaagggtggga 49900767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 132; Significance: 2e-68; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 46 - 220
Target Start/End: Original strand, 7217218 - 7217389
Alignment:
Q  46 cggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagtt 145  Q
    |||||||| ||||||||||||||  ||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  7217218 cggtagaaccttgcgatcatctagcctaaggtaagggtg--agactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagtt 7217315  T
Q  146 gttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  7217316 gttaatagg-tttgatgttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 7217389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 48 - 220
Target Start/End: Complemental strand, 22557323 - 22557154
Alignment:
Q  48 gtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgt 147  Q
    |||||| ||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||    
T  22557323 gtagaaccttgcgatcatctaacctaaggtaagggtgggag--taaccttcttta-tcataagtatgtaatcctgaaaaagggtttaaccttgtagttgt 22557227  T
Q  148 taataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  22557226 taataggttttgatgttgtagaattcgggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 22557154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 59 - 220
Target Start/End: Original strand, 23431434 - 23431593
Alignment:
Q  59 cgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggtttt 158  Q
    |||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||    
T  23431434 cgatcatctaatctaaggtaagcgtggga--ctaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgctaataggtttt 23431531  T
Q  159 gatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  23431532 gatgttgtagaattagggtttgaaactaaaattgattgtagaaagagtagataatccgatga 23431593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 46 - 220
Target Start/End: Original strand, 18455047 - 18455219
Alignment:
Q  46 cggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagtt 145  Q
    |||||||| |||| |||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| ||||| |||||||||    
T  18455047 cggtagaaccttgtgatcatctaacctaaggtaagggtgggag--taaccttctttaatcataagtatgtaatcctgaaaaaggttttaaccttgtagtt 18455144  T
Q  146 gttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    |||||||||||||||| ||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||    
T  18455145 gttaataggttttgatattgtagaattagggtttgaaactagaattgatagtagaaagagtagataatccgatga 18455219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 59 - 220
Target Start/End: Complemental strand, 25922066 - 25921907
Alignment:
Q  59 cgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggtttt 158  Q
    |||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||    
T  25922066 cgatcatctaatctaaggtaagggtggga--ctaaccttatttaatcataagtatgtaatcctaaaaaagggtttaaccttgtagttgttaataggtttt 25921969  T
Q  159 gatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||    
T  25921968 gatgttgtagaattaaggtttgaaactaaaattgattgtagaaagagtaaataatctgatga 25921907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 71 - 220
Target Start/End: Complemental strand, 31734760 - 31734613
Alignment:
Q  71 ctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaa 170  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||| ||||| |||||||||| |||| |||||||||||||||||||||||||| ||    
T  31734760 ctaaggtaagggtggga--ctaaccttctttaatcataagtatgtaattctgaaaaagggtttaaccttgcagttgttaataggttttgatgttgtaaaa 31734663  T
Q  171 ttaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  31734662 ttagggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 31734613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 68 - 220
Target Start/End: Complemental strand, 32259901 - 32259751
Alignment:
Q  68 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 167  Q
    ||||| ||||||||||| ||  ||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||| |||||| ||||||||||||||    
T  32259901 aatcttaggtaagggtgtga--ctaaccttctttaatcataagtatgtaatcctgaaaaagagtttaaccttgtagtttttaataagttttgatgttgta 32259804  T
Q  168 gaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  32259803 gaattagggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 32259751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 23658099 - 23657994
Alignment:
Q  115 taatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatc 214  Q
    |||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||    
T  23658099 taattctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaataagggtttgaaactaaaattgattgtagaaagagtagataatc 23658000  T
Q  215 cgatga 220  Q
    ||||||    
T  23657999 cgatga 23657994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 68 - 170
Target Start/End: Complemental strand, 1819008 - 1818909
Alignment:
Q  68 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 167  Q
    |||||||||||||||||  ||||||||||||||||||||| ||||| || | ||||| |||||||||| |||||||||||||||| ||||||||||| ||    
T  1819008 aatctaaggtaagggtg--agactaaccttctttaatcatgagtatatagttctgaaaaagggtttaagcttgtagttgttaata-gttttgatgttata 1818912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 25601326 - 25601406
Alignment:
Q  68 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatc-ttgtagttgtta 149  Q
    ||||||||||||||| |  |||||||||||| ||||||||||| ||||||| ||||| |||||||||| | ||||||||||||    
T  25601326 aatctaaggtaagggag--agactaaccttcattaatcataagaatgtaattctgaaaaagggtttaacctttgtagttgtta 25601406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 62 - 136
Target Start/End: Complemental strand, 31166302 - 31166230
Alignment:
Q  62 tcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaat 136  Q
    ||||| |||||||||||||||||  ||||||||| ||||||||||| ||| | |||| ||||| |||||||||||    
T  31166302 tcatccaatctaaggtaagggtg--agactaaccatctttaatcatgagtctataattctgaaaaagggtttaat 31166230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 68 - 179
Target Start/End: Complemental strand, 18459362 - 18459253
Alignment:
Q  68 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctg-aagaagggtttaatcttgtagttgttaataggttttgatgttgt 166  Q
    ||||||||||||||||||  ||||||||| |||||||||| ||||| | || ||| || ||||||||||| || ||||| |||| | ||||||||||| |    
T  18459362 aatctaaggtaagggtgg--gactaacctactttaatcatgagtatatgattctgaaaaaagggtttaattttatagtttttaaca-gttttgatgttat 18459266  T
Q  167 agaattaaggttt 179  Q
    |||| | ||||||    
T  18459265 agaagttaggttt 18459253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 29045213 - 29045170
Alignment:
Q  177 tttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    |||||||||||||||||| || |||||||||| |||||||||||    
T  29045213 tttgaaactaaaattgattgttgaaagagtaggtaatccgatga 29045170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 107
Target Start/End: Complemental strand, 13285809 - 13285767
Alignment:
Q  63 catctaatctaaggtaagggtgggagactaaccttctttaatcat 107  Q
    |||||||||||||||||||||||  |||||||||||| |||||||    
T  13285809 catctaatctaaggtaagggtgg--gactaaccttctataatcat 13285767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 170
Target Start/End: Complemental strand, 18982439 - 18982371
Alignment:
Q  101 taatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaa 170  Q
    ||||||||||||| |  | ||||| ||||||||||| ||||||||||| ||| ||||||||| |||||||    
T  18982439 taatcataagtatatggttctgaaaaagggtttaattttgtagttgttgata-gttttgatgctgtagaa 18982371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 87
Target Start/End: Original strand, 21683058 - 21683090
Alignment:
Q  55 cttgcgatcatctaatctaaggtaagggtggga 87  Q
    ||||||||||||||| |||||||||||||||||    
T  21683058 cttgcgatcatctaacctaaggtaagggtggga 21683090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 24506157 - 24506220
Alignment:
Q  115 taatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggttt 179  Q
    |||| ||||| ||||||||||| ||||||||||| ||| ||||||||||| ||||| | ||||||    
T  24506157 taattctgaaaaagggtttaattttgtagttgttgata-gttttgatgttatagaagttaggttt 24506220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 132; Significance: 2e-68; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 46 - 220
Target Start/End: Original strand, 19565892 - 19566064
Alignment:
Q  46 cggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagtt 145  Q
    |||||||| ||||||||||   |||||||||||||||||| |  ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  19565892 cggtagaaccttgcgatcaatcaatctaaggtaagggtggta--ctaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagtt 19565989  T
Q  146 gttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  19565990 gttaataggttttgatgttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 19566064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 61 - 220
Target Start/End: Original strand, 33243283 - 33243440
Alignment:
Q  61 atcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttga 160  Q
    ||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||    
T  33243283 atcatctaatctaaggtaagggtg--agactaacattctttaatcataagtatgtaatcttgaaatagggtttaatcttgtagttgttaataggttttga 33243380  T
Q  161 tgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  33243381 tgttgtagaattagggtttgaaactaaaattgattgtagaaagagtagataatccgatga 33243440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 61 - 220
Target Start/End: Complemental strand, 40230369 - 40230212
Alignment:
Q  61 atcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttga 160  Q
    |||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||| |||| ||||||||||  |||||||||||||||||||||||    
T  40230369 atcatctaatctaaggtaagggtggga--ctaactttctttaatcataagtatgtaatcttgaaaaagggtttaacattgtagttgttaataggttttga 40230272  T
Q  161 tgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  40230271 tgttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 40230212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 46 - 220
Target Start/End: Complemental strand, 12623394 - 12623222
Alignment:
Q  46 cggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagtt 145  Q
    |||||||| ||||||||||   ||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||    
T  12623394 cggtagaaccttgcgatcaatcaatctaaggtaagggtggga--ctaaccttctttaatcataggtatgtaatcctgaaaaagggtttaaccttgtagtt 12623297  T
Q  146 gttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||    
T  12623296 gttaataggttttgatgttgtagaattagggtttgaaactaaaattgattgtagaaagagtagataatgcgatga 12623222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 46 - 220
Target Start/End: Complemental strand, 46741277 - 46741105
Alignment:
Q  46 cggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagtt 145  Q
    |||||||| ||||||||||||||| |||||||||| ||||||  |||||||||||||||||||| |||||||||||||| |||||||||| |||||||||    
T  46741277 cggtagaaccttgcgatcatctaacctaaggtaagtgtggga--ctaaccttctttaatcataaatatgtaatcctgaaaaagggtttaaccttgtagtt 46741180  T
Q  146 gttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||    
T  46741179 gttaattggttttgatgttgtagaattagggtttgaaactaaaattgattgtagaaagagtggataatccgatga 46741105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 68 - 220
Target Start/End: Original strand, 44023599 - 44023749
Alignment:
Q  68 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 167  Q
    ||||||||||||||||| ||  |||||||||||||||||||||||||||||| |||| |||||||||| |||||| |||||| |||||||||||||||||    
T  44023599 aatctaaggtaagggtgcga--ctaaccttctttaatcataagtatgtaatcttgaaaaagggtttaaccttgtacttgttagtaggttttgatgttgta 44023696  T
Q  168 gaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  44023697 gaattagggtttgaaactaaaattgatcgtagaaagagtagataatctgatga 44023749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 33186913 - 33186808
Alignment:
Q  115 taatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatc 214  Q
    |||| ||||| |||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  33186913 taattctgaaaaagggtttaaccttgtggttgttaataggttttgatgttgtagaattagggtttgaaactaaaattgattgtagaaagagtagataatc 33186814  T
Q  215 cgatga 220  Q
    ||||||    
T  33186813 cgatga 33186808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 12424345 - 12424439
Alignment:
Q  126 aagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  12424345 aagggtttaactttgtagttgttaataggttttgatgttgtagaattagggtttggaactaaaattgatcgtagaaagagtagataatccgatga 12424439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 68 - 220
Target Start/End: Complemental strand, 18463079 - 18462929
Alignment:
Q  68 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 167  Q
    |||||||||||| |||||||  |||||||||||||||||| ||||| |||| ||||| ||||||||||| ||||||||||||||| ||||||||||| ||    
T  18463079 aatctaaggtaaaggtggga--ctaaccttctttaatcatgagtatataattctgaaaaagggtttaattttgtagttgttaata-gttttgatgttata 18462983  T
Q  168 gaattaaggtttgaaacta-aaattgatcgtagaaagagtagataatccgatga 220  Q
     || | |||||| ||| || || ||||| || ||||| |||| |||||| ||||    
T  18462982 aaagttaggttttaaattacaatttgattgttgaaagtgtaggtaatccaatga 18462929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 277 - 373
Target Start/End: Complemental strand, 355784 - 355687
Alignment:
Q  277 aatgatgattgatttggctatgatatgtatacatgaaaagtggattaactaggcgtaaatgattaatc-tctcaaatgctaattgtgctaaatgaagt 373  Q
    |||||||||| |||| |||||||||||||||| ||||| |||||||| |||||||||||||||||||| | ||||| |||| || |||||||||||||    
T  355784 aatgatgattaattttgctatgatatgtatacttgaaatgtggattagctaggcgtaaatgattaatcgtttcaaaggctagttttgctaaatgaagt 355687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 68 - 170
Target Start/End: Complemental strand, 14477687 - 14477588
Alignment:
Q  68 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 167  Q
    |||||||||||||||||| |  |||||||||||||||||| ||||| |||| ||||| |||||||| |||||||||| ||| ||| ||||||||||| ||    
T  14477687 aatctaaggtaagggtggca--ctaaccttctttaatcatgagtatataattctgaaaaagggtttgatcttgtagtcgttgata-gttttgatgttata 14477591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 46 - 135
Target Start/End: Original strand, 26921483 - 26921570
Alignment:
Q  46 cggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaa 135  Q
    ||||| || |||| |||||||||| ||||||||||||| |||  ||||||||| ||||||||||||||||||| ||||| ||||||||||    
T  26921483 cggtataaccttgtgatcatctaacctaaggtaagggtagga--ctaaccttcattaatcataagtatgtaattctgaaaaagggtttaa 26921570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 443 - 490
Target Start/End: Complemental strand, 355547 - 355500
Alignment:
Q  443 gatgttgactagtgacgatgaaaatatatatgtataaagtgatgatgt 490  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||    
T  355547 gatgttgactagtgacgatgaaaatatatatgtataaagtgacgatgt 355500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 49 - 170
Target Start/End: Original strand, 2424364 - 2424483
Alignment:
Q  49 tagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataag-tatgtaatcctgaagaagggtttaatcttgtagttgt 147  Q
    ||||| ||||||||||||||| |||||||||||||  ||||||||| |||| ||||  |||| | | ||||  |||| ||||||||||||||||||||||    
T  2424364 tagaaccttgcgatcatctaacctaaggtaagggt--gagactaactttctctaattctaagttgtataattttgaaaaagggtttaatcttgtagttgt 2424461  T
Q  148 taataggttttgatgttgtagaa 170  Q
    || || ||||||||||| |||||    
T  2424462 tatta-gttttgatgttatagaa 2424483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 443 - 490
Target Start/End: Original strand, 12319050 - 12319097
Alignment:
Q  443 gatgttgactagtgacgatgaaaatatatatgtataaagtgatgatgt 490  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||    
T  12319050 gatgttgactggtgacgatgaaaatatatatgtataaagtgacgatgt 12319097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 170
Target Start/End: Complemental strand, 13165188 - 13165089
Alignment:
Q  68 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 167  Q
    ||||||||||||||||||||  |||||||||||||||||| |||||   ||  |||| ||||| ||||| || |||||||||||| ||||||||||| ||    
T  13165188 aatctaaggtaagggtggga--ctaaccttctttaatcatgagtataggattgtgaaaaaggggttaattttatagttgttaata-gttttgatgttata 13165092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 45314096 - 45314144
Alignment:
Q  87 agactaaccttctttaatcataagtatgtaatcctgaagaagggtttaa 135  Q
    |||||||||||| ||||||||||||||||||| ||||| ||||||||||    
T  45314096 agactaaccttcattaatcataagtatgtaattctgaaaaagggtttaa 45314144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 16296844 - 16296777
Alignment:
Q  154 gttttgatgttgtagaa-ttaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    ||||||||||| ||||| ||| ||||||||| |||||||||| || |||||||||| |||||||||||    
T  16296844 gttttgatgttatagaaattagggtttgaaattaaaattgattgttgaaagagtaggtaatccgatga 16296777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 115
Target Start/End: Complemental strand, 26014360 - 26014295
Alignment:
Q  48 gtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgt 115  Q
    |||||| ||| |||||||||||||||||||||||||||  |||||||||||  ||||| | |||||||    
T  26014360 gtagaaccttccgatcatctaatctaaggtaagggtgg--gactaaccttcaataatcttgagtatgt 26014295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 148
Target Start/End: Complemental strand, 9639075 - 9638987
Alignment:
Q  59 cgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagta-tgtaatcctgaagaagggtttaatcttgtagttgtt 148  Q
    |||| ||||||||||||||||||||||||  ||| | |||| |||| || |||  |||||| ||||| |||||||||| ||||||||||||    
T  9639075 cgataatctaatctaaggtaagggtggga--ctagctttctctaataatgagttgtgtaattctgaaaaagggtttaaccttgtagttgtt 9638987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 164
Target Start/End: Complemental strand, 20150830 - 20150787
Alignment:
Q  121 tgaagaagggtttaatcttgtagttgttaataggttttgatgtt 164  Q
    |||| |||| ||||| ||||||||||||||||||||||||||||    
T  20150830 tgaaaaaggatttaaccttgtagttgttaataggttttgatgtt 20150787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 441
Target Start/End: Complemental strand, 355602 - 355562
Alignment:
Q  401 tgatgatgatttttgatgatgagtatacatatataaagtga 441  Q
    ||||| |||||||| |||| |||||||||||||||||||||    
T  355602 tgatggtgattttttatgacgagtatacatatataaagtga 355562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 128; Significance: 6e-66; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 46 - 220
Target Start/End: Complemental strand, 4499 - 4327
Alignment:
Q  46 cggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagtt 145  Q
    ||||| || ||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||| |||||| ||| || ||||||| |||||||||    
T  4499 cggtacaaccttgcgatcatctaacctaaggtaagggtggga--ctaaccttctttaatcataagtatataatcccgaaaaaaggtttaaccttgtagtt 4402  T
Q  146 gttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  4401 gttaataggttttgatgttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 4327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 128; Significance: 6e-66; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 46 - 220
Target Start/End: Complemental strand, 423 - 251
Alignment:
Q  46 cggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagtt 145  Q
    |||||||| ||||||||||||||| ||||||||||||||  ||| ||| |||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  423 cggtagaaccttgcgatcatctaacctaaggtaagggtg--agattaatcttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagtt 326  T
Q  146 gttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||    
T  325 gttaataggttttgatgttgtagaattagggtttgaaactaaaatttatagtagaaagagtagataatccgatga 251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 128; Significance: 6e-66; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 46 - 220
Target Start/End: Original strand, 9902 - 10074
Alignment:
Q  46 cggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagtt 145  Q
    |||||||| ||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||| ||||| |||||||||  |||||||||    
T  9902 cggtagaaccttgcgatcatctaacctaaggtaagggtggga--ctaaccttctttaatcataagtatgtaattctgaaaaagggtttagccttgtagtt 9999  T
Q  146 gttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
      |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  10000 tctaataggttttgatgttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 10074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 126; Significance: 9e-65; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 68 - 220
Target Start/End: Complemental strand, 9119 - 8969
Alignment:
Q  68 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 167  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  9119 aatctaaggtaagggtggga--ctaaccttctttaatcataagtatgtaatcctgaaaaagggtttaatcttgtagttgttaataggttttgatgttgta 9022  T
Q  168 gaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||| ||||||    
T  9021 gaattagggtttgaaactaaaattgatcgtagaaagagtatataatgcgatga 8969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 124; Significance: 1e-63; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 46 - 220
Target Start/End: Complemental strand, 22474834 - 22474662
Alignment:
Q  46 cggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagtt 145  Q
    |||||||| ||||||||||   ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  22474834 cggtagaaccttgcgatcaatcaatctaaggtaagggtggga--ctaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagtt 22474737  T
Q  146 gttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||| |||||    
T  22474736 gttaataggttttgatgttgtagaattagggtttgaaactaaaattgattgtcgaaagagtagataatctgatga 22474662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 46 - 220
Target Start/End: Original strand, 17978390 - 17978562
Alignment:
Q  46 cggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagtt 145  Q
    |||||||| ||||||||||||||| |||||||||||||||||  |||| ||||| |||||||||||||||||||||||| |||| ||||| |||||||||    
T  17978390 cggtagaaccttgcgatcatctaaactaaggtaagggtggga--ctaaacttctataatcataagtatgtaatcctgaaaaaggatttaaccttgtagtt 17978487  T
Q  146 gttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||| ||||||||||||||    
T  17978488 gttaataggttttgatgttgtagaattagggtttgaaactaaaattgattatagaaagagcagataatccgatga 17978562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 59 - 220
Target Start/End: Original strand, 12037151 - 12037310
Alignment:
Q  59 cgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggtttt 158  Q
    |||||||||||| ||||||||||||||||  |||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||    
T  12037151 cgatcatctaatataaggtaagggtggga--ctaaccttgtttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaatagctttt 12037248  T
Q  159 gatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    ||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||||    
T  12037249 gatgttgtagaatcagggtttgaaactaaaattgattgtagaaagagtagataatccgatga 12037310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 59 - 220
Target Start/End: Original strand, 21579193 - 21579352
Alignment:
Q  59 cgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggtttt 158  Q
    |||||||||||| ||||||||||||| ||  ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||    
T  21579193 cgatcatctaatttaaggtaagggtgtga--ctaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaatatgtttt 21579290  T
Q  159 gatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    ||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||    
T  21579291 gatgttgtagaattagggttcgaaactaaaattgattgtagaaagagtagataatccgatga 21579352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 59 - 220
Target Start/End: Original strand, 29762855 - 29763014
Alignment:
Q  59 cgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggtttt 158  Q
    |||||||||||| |||||||||||||  | |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||    
T  29762855 cgatcatctaatttaaggtaagggtg--aaactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataagtttt 29762952  T
Q  159 gatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    |||||||||||||||  ||||||||||||||||||| |||||||||||||||||| ||||||    
T  29762953 gatgttgtagaattagagtttgaaactaaaattgattgtagaaagagtagataatgcgatga 29763014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 71 - 220
Target Start/End: Original strand, 41680132 - 41680279
Alignment:
Q  71 ctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaa 170  Q
    ||||||||| |||||||  ||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||    
T  41680132 ctaaggtaaaggtggga--ctaaccttctttaatcataagtatgtaatcctgataaagggtttaaccttgtagttgttaataggttttgatgttgtagaa 41680229  T
Q  171 ttaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    ||| |||||||||||||||||||  |||||| ||||||||||||||||||    
T  41680230 ttagggtttgaaactaaaattgactgtagaaggagtagataatccgatga 41680279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 59 - 220
Target Start/End: Complemental strand, 22208334 - 22208174
Alignment:
Q  59 cgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagta-tgtaatcctgaagaagggtttaatcttgtagttgttaataggttt 157  Q
    |||||||||||||||||||||||||||||  ||| | |||| |||| ||  ||  | |||| ||||| |||||||||| |||||||||||||||||||||    
T  22208334 cgatcatctaatctaaggtaagggtggga--ctagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttaataggttt 22208237  T
Q  158 tgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  22208236 tgatgttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 22208174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 49 - 199
Target Start/End: Original strand, 36405109 - 36405257
Alignment:
Q  49 tagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaat-cctgaagaagggtttaatcttgtagttgt 147  Q
    ||||| ||||||||||   ||||||||||||||||| ||  ||||| ||||||||||||||||||||||| |||||| |||||||||| |||||||||||    
T  36405109 tagaaccttgcgatcaatcaatctaaggtaagggtgtga--ctaactttctttaatcataagtatgtaatccctgaa-aagggtttaaccttgtagttgt 36405205  T
Q  148 taataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtag 199  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||| ||||    
T  36405206 taataggttttgatgtcgtagaattatggtttgaaactaaaattgattgtag 36405257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 59 - 220
Target Start/End: Original strand, 22258293 - 22258453
Alignment:
Q  59 cgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagta-tgtaatcctgaagaagggtttaatcttgtagttgttaataggttt 157  Q
    |||||||||||| |||||||||||||  |||||| | |||| |||| || |||  | |||| |  || |||||||||| |||| ||||||| ||||||||    
T  22258293 cgatcatctaatttaaggtaagggtg--agactagctttctctaataatgagttgtataattccaaaaaagggtttaaccttgcagttgttgataggttt 22258390  T
Q  158 tgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    |||||||||||||||| | ||||||||||||| |||| |||||||||||||||||||||||||    
T  22258391 tgatgttgtagaattaggttttgaaactaaaactgattgtagaaagagtagataatccgatga 22258453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 68 - 164
Target Start/End: Complemental strand, 20879528 - 20879435
Alignment:
Q  68 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgtt 164  Q
    ||||||||||||||||||||  |||||||||||||||||||||||| |  | || || |||||||||| ||||||||| ||||| ||||||||||||    
T  20879528 aatctaaggtaagggtggga--ctaaccttctttaatcataagtatatggttctaaaaaagggtttaagcttgtagttattaat-ggttttgatgtt 20879435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 48 - 170
Target Start/End: Original strand, 4380593 - 4380713
Alignment:
Q  48 gtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataag-tatgtaatcctgaagaagggtttaatcttgtagttg 146  Q
    |||||| ||||||||||||||| |||||||||||||||  ||||||| |||| ||||  |||| | | |||| ||||| |||||||||| ||||||||||    
T  4380593 gtagaaccttgcgatcatctaacctaaggtaagggtgg--gactaactttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagttg 4380690  T
Q  147 ttaataggttttgatgttgtagaa 170  Q
    ||  || ||||||||||| |||||    
T  4380691 ttgtta-gttttgatgttatagaa 4380713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 48 - 87
Target Start/End: Original strand, 20022016 - 20022055
Alignment:
Q  48 gtagaatcttgcgatcatctaatctaaggtaagggtggga 87  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  20022016 gtagaatcttccgatcatctaatctaaggtaagggtggga 20022055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 68 - 118
Target Start/End: Original strand, 20517032 - 20517080
Alignment:
Q  68 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaat 118  Q
    ||||||||||||||||||||  |||||||||||||||||||||||| ||||    
T  20517032 aatctaaggtaagggtggga--ctaaccttctttaatcataagtatataat 20517080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 121 - 164
Target Start/End: Complemental strand, 22966815 - 22966772
Alignment:
Q  121 tgaagaagggtttaatcttgtagttgttaataggttttgatgtt 164  Q
    |||| |||||||||| ||||||||||||||||||||||||||||    
T  22966815 tgaaaaagggtttaaccttgtagttgttaataggttttgatgtt 22966772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 5761611 - 5761570
Alignment:
Q  46 cggtagaatcttgcgatcatctaatctaaggtaagggtggga 87  Q
    |||||||| ||||||||||||||| |||||||||||||||||    
T  5761611 cggtagaaccttgcgatcatctaacctaaggtaagggtggga 5761570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 164
Target Start/End: Original strand, 21697512 - 21697550
Alignment:
Q  126 aagggtttaatcttgtagttgttaataggttttgatgtt 164  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  21697512 aagggtttaacattgtagttgttaataggttttgatgtt 21697550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 84
Target Start/End: Original strand, 36732386 - 36732424
Alignment:
Q  46 cggtagaatcttgcgatcatctaatctaaggtaagggtg 84  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  36732386 cggtagaaccttgcgatcatctaacctaaggtaagggtg 36732424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 21514769 - 21514728
Alignment:
Q  46 cggtagaatcttgcgatcatctaatctaaggtaagggtggga 87  Q
    |||||||| |||||||||||||||  ||||||||||||||||    
T  21514769 cggtagaaccttgcgatcatctaacttaaggtaagggtggga 21514728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 123; Significance: 6e-63; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 71 - 220
Target Start/End: Complemental strand, 174274 - 174127
Alignment:
Q  71 ctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaa 170  Q
    |||| ||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  174274 ctaaagtaagggtggga--ctaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaa 174177  T
Q  171 ttaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  174176 ttagggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 174127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 122; Significance: 2e-62; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 68 - 220
Target Start/End: Complemental strand, 14318128 - 14317978
Alignment:
Q  68 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 167  Q
    |||||||||||||||||||| |  ||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||    
T  14318128 aatctaaggtaagggtgggaca--aaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgcagttgttaataggttttgatgttgta 14318031  T
Q  168 gaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  14318030 gaattagggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 14317978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 59 - 220
Target Start/End: Original strand, 14160843 - 14161002
Alignment:
Q  59 cgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggtttt 158  Q
    |||||||||||| |||| |||||||||||  ||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||    
T  14160843 cgatcatctaatttaagataagggtggga--ctaaccttctttaatcataagtatgtaatcctgaaaaggggtttaaccttgtagttgttaataggtttt 14160940  T
Q  159 gatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||    
T  14160941 gatgttgtagaattagggtttgaaactaaaattgattgtagaaagagtagataattcgatga 14161002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 88 - 220
Target Start/End: Original strand, 9743093 - 9743225
Alignment:
Q  88 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 187  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  9743093 gactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataagttttgatgttgtagaattagggtttgaaactaa 9743192  T
Q  188 aattgatcgtagaaagagtagataatccgatga 220  Q
    |||||||||||||||||||||||||||||||||    
T  9743193 aattgatcgtagaaagagtagataatccgatga 9743225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 71 - 220
Target Start/End: Original strand, 15119306 - 15119453
Alignment:
Q  71 ctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaa 170  Q
    ||||||||||||| |||  |||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||| ||||||||||||||||    
T  15119306 ctaaggtaagggtagga--ctaaccttctttaatcataagtatgtaatcttgaaaaagggtttaaccttgtagttgttaatagattttgatgttgtagaa 15119403  T
Q  171 ttaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  15119404 ttagggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 15119453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 59 - 220
Target Start/End: Original strand, 43276731 - 43276890
Alignment:
Q  59 cgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagta-tgtaatcctgaagaagggtttaatcttgtagttgttaataggttt 157  Q
    |||||||||||| ||||||||||||||||  ||||| |||| |||| ||  ||  | |||| ||||| || ||||||| |||||||||||||||||||||    
T  43276731 cgatcatctaatttaaggtaagggtggga--ctaactttctctaataatgggttgtataattctgaa-aatggtttaaccttgtagttgttaataggttt 43276827  T
Q  158 tgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||    
T  43276828 tgatgttgtagaattagggtttgaaactaaaattgattgtagaaagagtaaataatccgatga 43276890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 8513806 - 8513898
Alignment:
Q  126 aagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtag-aaagagtagataatccga 217  Q
    |||||||||| |||||||||||| ||||||||||||| |||||||||| ||||||||||||||| | || |||| ||||||||||||||||||    
T  8513806 aagggtttaaccttgtagttgtttataggttttgatgctgtagaattagggtttgaaactaaaactaattgtagaaaagagtagataatccga 8513898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 68 - 148
Target Start/End: Original strand, 42565829 - 42565907
Alignment:
Q  68 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgtt 148  Q
    |||||||||||||||||  ||||||| ||||||||||||||| ||| |||| ||||| |||||||||||||||||||||||    
T  42565829 aatctaaggtaagggtg--agactaatcttctttaatcataaatatataattctgaaaaagggtttaatcttgtagttgtt 42565907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 182
Target Start/End: Complemental strand, 33060494 - 33060383
Alignment:
Q  68 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 167  Q
    ||||||||||||||||||||  |||||||||||||||||| ||| | |||| ||| | ||||||||||| |||| |||||| |||  |||||||||  ||    
T  33060494 aatctaaggtaagggtggga--ctaaccttctttaatcatgagtctataattctggaaaagggtttaattttgttgttgtttata-attttgatgtaata 33060398  T
Q  168 gaattaaggtttgaa 182  Q
    ||| | |||||||||    
T  33060397 gaagttaggtttgaa 33060383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 49 - 170
Target Start/End: Original strand, 4690640 - 4690759
Alignment:
Q  49 tagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataag-tatgtaatcctgaagaagggtttaatcttgtagttgt 147  Q
    ||||| ||||||||||||||| ||||||||| |||||  ||||||| |||| ||||  |||| | | |||| ||||| |||||||||| |||||||||||    
T  4690640 tagaaccttgcgatcatctaacctaaggtaaaggtgg--gactaactttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagttgt 4690737  T
Q  148 taataggttttgatgttgtagaa 170  Q
    || ||  |||||||||| |||||    
T  4690738 tatta-cttttgatgttatagaa 4690759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 170
Target Start/End: Complemental strand, 43745734 - 43745612
Alignment:
Q  46 cggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataag-tatgtaatcctgaagaagggtttaatcttgtagt 144  Q
    |||||||| ||||||||||||||| |||||||||||||||  ||||| | |||| |||| || || | | ||||  |||| |||||||||| ||||||||    
T  43745734 cggtagaaccttgcgatcatctaacctaaggtaagggtgg--gactagctttctctaataatgagttgtataattatgaaaaagggtttaaccttgtagt 43745637  T
Q  145 tgttaataggttttgatgttgtagaa 170  Q
    ||||  || ||||||||||| |||||    
T  43745636 tgttgtta-gttttgatgttatagaa 43745612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 8488147 - 8488194
Alignment:
Q  126 aagggtttaatcttgtagttgttaataggttttgatgttgtagaatta 173  Q
    |||||||||| ||| |||||||| ||||||||||||| ||||||||||    
T  8488147 aagggtttaaccttatagttgtttataggttttgatgctgtagaatta 8488194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 84
Target Start/End: Original strand, 48212702 - 48212739
Alignment:
Q  47 ggtagaatcttgcgatcatctaatctaaggtaagggtg 84  Q
    ||||||| ||||||||||||||| ||||||||||||||    
T  48212702 ggtagaaccttgcgatcatctaacctaaggtaagggtg 48212739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 58400 - 58428
Alignment:
Q  59 cgatcatctaatctaaggtaagggtggga 87  Q
    |||||||||||||||||||||||||||||    
T  58400 cgatcatctaatctaaggtaagggtggga 58428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 12127150 - 12127178
Alignment:
Q  59 cgatcatctaatctaaggtaagggtggga 87  Q
    |||||||||||||||||||||||||||||    
T  12127150 cgatcatctaatctaaggtaagggtggga 12127178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 19195676 - 19195648
Alignment:
Q  59 cgatcatctaatctaaggtaagggtggga 87  Q
    |||||||||||||||||||||||||||||    
T  19195676 cgatcatctaatctaaggtaagggtggga 19195648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 118; Significance: 5e-60; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 68 - 220
Target Start/End: Complemental strand, 62774 - 62624
Alignment:
Q  68 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 167  Q
    |||||||||||||| ||  |||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||    
T  62774 aatctaaggtaaggatg--agactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtggttgttaataggttttgatgttgta 62677  T
Q  168 gaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  62676 gaattagggtttgaaactaaaattgattgtagaaagagtagataatccgatga 62624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 117; Significance: 2e-59; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 73 - 220
Target Start/End: Original strand, 23968624 - 23968769
Alignment:
Q  73 aaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaatt 172  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||| || ||||||| |||||||| |||||||||||||||||||||||||||    
T  23968624 aaggtaagggtg--agactaaccttctttaatcataagtatgtaatcctgaaaaaaggtttaaccttgtagtcgttaataggttttgatgttgtagaatt 23968721  T
Q  173 aaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||    
T  23968722 agggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 23968769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 59 - 220
Target Start/End: Original strand, 14179715 - 14179874
Alignment:
Q  59 cgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggtttt 158  Q
    |||||||||||| ||||||||||||||||  |||||||||||||||||| |||||||||||||||| || ||||||  ||| || |||||||||| ||||    
T  14179715 cgatcatctaatataaggtaagggtggga--ctaaccttctttaatcatgagtatgtaatcctgaaaaaaggtttatccttatacttgttaatagatttt 14179812  T
Q  159 gatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    |||||||| |||||| |||||||||||||||||||| ||||||||||||||||||| |||||    
T  14179813 gatgttgtggaattagggtttgaaactaaaattgattgtagaaagagtagataatctgatga 14179874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 59 - 220
Target Start/End: Original strand, 14183453 - 14183612
Alignment:
Q  59 cgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggtttt 158  Q
    |||||||||||| ||||||||||||||||  |||||||||||||||||| |||||||||||||||| || | ||||  ||| || |||||||||||||||    
T  14183453 cgatcatctaatttaaggtaagggtggga--ctaaccttctttaatcatgagtatgtaatcctgaaaaaagatttatccttatacttgttaataggtttt 14183550  T
Q  159 gatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    |||||||| |||||| |||||||||||||||||||| |||||||| ||||||||||||||||    
T  14183551 gatgttgtggaattagggtttgaaactaaaattgattgtagaaagggtagataatccgatga 14183612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 76 - 220
Target Start/End: Complemental strand, 24718067 - 24717925
Alignment:
Q  76 gtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaag 175  Q
    ||||||||||||  ||||| ||||||||||||||||||||||||||||| | |||||||| |||||| |||| ||||||||||||||||| ||||||  |    
T  24718067 gtaagggtggga--ctaacattctttaatcataagtatgtaatcctgaaaaggggtttaaccttgtatttgtcaataggttttgatgttgcagaattcgg 24717970  T
Q  176 gtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  24717969 gtttgaaactaaaattgattgtagaaagagtagataatccgatga 24717925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 68 - 153
Target Start/End: Complemental strand, 19647289 - 19647206
Alignment:
Q  68 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaatag 153  Q
    ||||||||||| |||||  ||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||    
T  19647289 aatctaaggtatgggtg--agactaaccttctttaatcataagtatataattctgaaaaagggtttaatcttgtagttgttaatag 19647206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 68 - 182
Target Start/End: Original strand, 20005967 - 20006078
Alignment:
Q  68 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 167  Q
    ||||||||||||||||||||  ||| |||||||||||||| ||| | |||| ||||| ||||||||||| |||| ||||||||||  |||||||||| ||    
T  20005967 aatctaaggtaagggtggga--ctagccttctttaatcatgagtctataattctgaaaaagggtttaattttgttgttgttaata-attttgatgttata 20006063  T
Q  168 gaattaaggtttgaa 182  Q
    ||| | |||||||||    
T  20006064 gaagttaggtttgaa 20006078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 68 - 170
Target Start/End: Original strand, 28652548 - 28652648
Alignment:
Q  68 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatc-ttgtagttgttaataggttttgatgttgt 166  Q
    ||||||||||||||||||||  ||||||||| ||||||||||||||||||| ||||| |||||||||  | |||||||||||  || ||||||||||| |    
T  28652548 aatctaaggtaagggtggga--ctaaccttcattaatcataagtatgtaattctgaaaaagggtttagcctttgtagttgttgtta-gttttgatgttat 28652644  T
Q  167 agaa 170  Q
    ||||    
T  28652645 agaa 28652648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 68 - 148
Target Start/End: Complemental strand, 45535981 - 45535903
Alignment:
Q  68 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgtt 148  Q
    ||||||||||||||||||||  |||||||||||||||||  ||| | |||| ||||| |||||||||||||||| ||||||    
T  45535981 aatctaaggtaagggtggga--ctaaccttctttaatcacgagtctataattctgaaaaagggtttaatcttgttgttgtt 45535903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 443 - 490
Target Start/End: Original strand, 27609193 - 27609240
Alignment:
Q  443 gatgttgactagtgacgatgaaaatatatatgtataaagtgatgatgt 490  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||    
T  27609193 gatgttgactagtgacaatgaaaatatatttgtataaagtgatgatgt 27609240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 411
Target Start/End: Complemental strand, 43938779 - 43938684
Alignment:
Q  319 gattaactaggcgtaaatgattaatc-tctcaaatgctaattgtgctaaatgaagt--tgctacttatttgatgtggtaaatgtttgatgatgatt 411  Q
    |||| |||||| ||||||| |||||| ||| ||||| || || ||||||||||||   || ||||| |||||||||||||||||||||||||||||    
T  43938779 gattgactaggtgtaaatggttaatcgtctaaaatgttatttttgctaaatgaagagatgttacttctttgatgtggtaaatgtttgatgatgatt 43938684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 149585 - 149652
Alignment:
Q  154 gttttgatgttgtagaa-ttaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    ||||||||||| ||||| ||| ||||||||| |||||||||| || |||||||||| |||||||||||    
T  149585 gttttgatgttatagaaattagggtttgaaattaaaattgattgttgaaagagtaggtaatccgatga 149652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 91 - 170
Target Start/End: Original strand, 25584280 - 25584358
Alignment:
Q  91 taaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaa 170  Q
    ||||||||||||||||| ||||| |||| ||||| |||||||||| ||||| |||| | ||| ||||||||||| |||||    
T  25584280 taaccttctttaatcatgagtatataattctgaaaaagggtttaaccttgtcgttgatgata-gttttgatgttatagaa 25584358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 72 - 135
Target Start/End: Original strand, 12626427 - 12626488
Alignment:
Q  72 taaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaa 135  Q
    ||||||||||||||||  ||||||||| |||||||||||| | |||| ||||| ||||||||||    
T  12626427 taaggtaagggtggga--ctaaccttcattaatcataagtgtataattctgaaaaagggtttaa 12626488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 220
Target Start/End: Original strand, 12626535 - 12626578
Alignment:
Q  177 tttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    |||||||||||||||||| || |||||||||| |||||||||||    
T  12626535 tttgaaactaaaattgattgttgaaagagtaggtaatccgatga 12626578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 23610704 - 23610663
Alignment:
Q  46 cggtagaatcttgcgatcatctaatctaaggtaagggtggga 87  Q
    |||||||| ||||||| ||||||| |||||||||||||||||    
T  23610704 cggtagaaccttgcgaacatctaacctaaggtaagggtggga 23610663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 17307551 - 17307523
Alignment:
Q  59 cgatcatctaatctaaggtaagggtggga 87  Q
    |||||||||||||||||||||||||||||    
T  17307551 cgatcatctaatctaaggtaagggtggga 17307523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 21369358 - 21369330
Alignment:
Q  59 cgatcatctaatctaaggtaagggtggga 87  Q
    |||||||||||||||||||||||||||||    
T  21369358 cgatcatctaatctaaggtaagggtggga 21369330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 22502036 - 22502008
Alignment:
Q  59 cgatcatctaatctaaggtaagggtggga 87  Q
    |||||||||||||||||||||||||||||    
T  22502036 cgatcatctaatctaaggtaagggtggga 22502008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 22509970 - 22509942
Alignment:
Q  59 cgatcatctaatctaaggtaagggtggga 87  Q
    |||||||||||||||||||||||||||||    
T  22509970 cgatcatctaatctaaggtaagggtggga 22509942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 116; Significance: 8e-59; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 46 - 220
Target Start/End: Complemental strand, 33532 - 33360
Alignment:
Q  46 cggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagtt 145  Q
    |||||||| ||||||||||   ||||||||||||||||||||  |||||||||||||||||||||||| |||||||||| |||||||||| | |||||||    
T  33532 cggtagaaccttgcgatcaatcaatctaaggtaagggtggga--ctaaccttctttaatcataagtatttaatcctgaaaaagggtttaaacgtgtagtt 33435  T
Q  146 gttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| || |||| |||||||||||||||||    
T  33434 gttaataggttttgatgttgtagaattagggtttgaaactaaaattgattgttgaaatagtagataatccgatga 33360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 115; Significance: 3e-58; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 71 - 220
Target Start/End: Original strand, 10445 - 10592
Alignment:
Q  71 ctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaa 170  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||    
T  10445 ctaaggtaagggtggga--ctaaccttctttaatcataagtatgtaatcctgaaaaagggtttaacattgtagttgttaataggttttgatgttgtagaa 10542  T
Q  171 ttaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    ||| |||||||||||||||||||| |||||||||||||||||| ||||||    
T  10543 ttagggtttgaaactaaaattgattgtagaaagagtagataatacgatga 10592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 148
Target Start/End: Complemental strand, 3927 - 3853
Alignment:
Q  71 ctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgtt 148  Q
    |||||||||||||| ||  | |||||||||||| |||||||||||||||||||| |||| ||||| | ||||||||||    
T  3927 ctaaggtaagggtgtga--ccaaccttctttaaacataagtatgtaatcctgaaaaaggatttaa-catgtagttgtt 3853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 109; Significance: 1e-54; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 47 - 220
Target Start/End: Complemental strand, 57050 - 56882
Alignment:
Q  47 ggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttg 146  Q
    ||||||| || |||||||| ||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||   ||| ||||||| ||    
T  57050 ggtagaacctggcgatcatataacctaaggtaagggtggga--ctaaccttctttaatcataagtatgtaatcctgaaaaagg---taaccttgtagatg 56956  T
Q  147 ttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||    
T  56955 ttaataggttttgatgttgtagaattagggtttgaaactaaaattgattgtagaaagagtagataattcgatga 56882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 5630 - 5536
Alignment:
Q  126 aagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  5630 aagggtttaactttgtagttgttaataggttttgatgttgtagaattagggtttggaactaaaattgatcgtagaaagagtagataatccgatga 5536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 46 - 220
Target Start/End: Complemental strand, 6496 - 6322
Alignment:
Q  46 cggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagta-tgtaatcctgaagaagggtttaatcttgtagt 144  Q
    |||||||| ||||||||||   ||||||||||||||||   |||||| | |||| |||| || |||  |||||| ||||| ||||| |||||||||||||    
T  6496 cggtagaaccttgcgatcaatcaatctaaggtaagggta--agactagctttctctaataatgagttgtgtaattctgaaaaagggattaatcttgtagt 6399  T
Q  145 tgttaataggttttga-tgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    |||| ||||||||| | ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  6398 tgtttataggtttttaatgttgtagaattagggtttgaaactaaaattgattgtagaaagagtagataatccgatga 6322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1437 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold1437
Description:

Target: scaffold1437; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 101 - 220
Target Start/End: Original strand, 321 - 440
Alignment:
Q  101 taatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtaga 200  Q
    ||||||||||||||| ||||  || ||||||||||  |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| || |    
T  321 taatcataagtatgtcatccaaaaaaagggtttaacattgtagttgttaataggttttgatgttgtaaaattaaggttggaaactaaaattgatcataaa 420  T
Q  201 aagagtagataatccgatga 220  Q
    |||| |||||||||||||||    
T  421 aagattagataatccgatga 440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1160 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold1160
Description:

Target: scaffold1160; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 127 - 220
Target Start/End: Complemental strand, 683 - 590
Alignment:
Q  127 agggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    |||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  683 agggtttaacattgtagttgttaataggttttgatgttgtagaattagggtttgaaactaaaattgatcatagaaagagtatataatccgatga 590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 20199 - 20105
Alignment:
Q  126 aagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||| ||||||||| |||||||||||||||    
T  20199 aagggtttaaccttgtagttgttaataggttttgatgttttagaattagggtttgaaattaaaattgattgtagaaagaatagataatccgatga 20105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 68 - 220
Target Start/End: Original strand, 38438 - 38588
Alignment:
Q  68 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 167  Q
    ||||||||||||||||| ||  |||||||||||||||||| ||||| |||| ||||| ||||||||||| ||||||||||||||| ||||||||||| ||    
T  38438 aatctaaggtaagggtgtga--ctaaccttctttaatcatgagtatataattctgaaaaagggtttaattttgtagttgttaata-gttttgatgttata 38534  T
Q  168 gaattaaggtttgaaacta-aaattgatcgtagaaagagtagataatccgatga 220  Q
    ||| | |||||| ||| || || ||||| || ||||| |||| |||||| ||||    
T  38535 gaagttaggttttaaattacaatttgattgttgaaagtgtaggtaatccaatga 38588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 59; Significance: 9e-25; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 169408 - 169346
Alignment:
Q  158 tgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  169408 tgatgttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 169346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 66 - 153
Target Start/End: Complemental strand, 17163 - 17078
Alignment:
Q  66 ctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaatag 153  Q
    ||||||||||||||||||||||  | || ||||||||||||| ||||| |||| || || ||||||||||  ||||||||||| ||||    
T  17163 ctaatctaaggtaagggtggga--cgaatcttctttaatcatgagtatataattcttaaaaagggtttaactttgtagttgttgatag 17078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 66 - 153
Target Start/End: Complemental strand, 26694 - 26609
Alignment:
Q  66 ctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaatag 153  Q
    ||||||||||||||||||||||  | || ||||||||||||| ||||| |||| || || ||||||||||  ||||||||||| ||||    
T  26694 ctaatctaaggtaagggtggga--cgaatcttctttaatcatgagtatataattcttaaaaagggtttaactttgtagttgttgatag 26609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 68 - 153
Target Start/End: Complemental strand, 28769 - 28686
Alignment:
Q  68 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaatag 153  Q
    ||||||||||||| ||||||  |||||||||||||||||||||||| |||| ||||| ||| ||||||||||||||||||||||||    
T  28769 aatctaaggtaagagtggga--ctaaccttctttaatcataagtatataattctgaaaaagcgtttaatcttgtagttgttaatag 28686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 66 - 179
Target Start/End: Complemental strand, 31987 - 31877
Alignment:
Q  66 ctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttg 165  Q
    |||||||||||||||||||  ||||||||| ||||||||||| ||||| | || ||||| ||||||||||| || |||||||||||| ||||||||||||    
T  31987 ctaatctaaggtaagggtg--agactaaccatctttaatcatgagtatatgattctgaaaaagggtttaattttatagttgttaata-gttttgatgttg 31891  T
Q  166 tagaattaaggttt 179  Q
    ||||| | ||||||    
T  31890 tagaagttaggttt 31877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 136
Target Start/End: Complemental strand, 32100 - 32038
Alignment:
Q  72 taaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaat 136  Q
    |||||||||||||||   |||||||||||||||||| ||||| | || ||||| |||||||||||    
T  32100 taaggtaagggtgggg--ctaaccttctttaatcatgagtatatgattctgaaaaagggtttaat 32038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 46 - 169
Target Start/End: Original strand, 6394 - 6514
Alignment:
Q  46 cggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatc-ttgtagt 144  Q
    |||||||| ||||||||||||||| |||||||||||||||  ||||||||||| ||||||||||||||||||| || || |||||||||| | |||||||    
T  6394 cggtagaaccttgcgatcatctaacctaaggtaagggtgg--gactaaccttcattaatcataagtatgtaattct-aaaaagggtttaacctttgtagt 6490  T
Q  145 tgttaataggttttgatgttgtaga 169  Q
    ||||  || ||||||||||| ||||    
T  6491 tgttgtta-gttttgatgttataga 6514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 68 - 179
Target Start/End: Complemental strand, 3260 - 3152
Alignment:
Q  68 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 167  Q
    ||||||||||||||||||||  |||||||||||||||||| ||||| ||||  |||| ||||||||||| ||||||||||| ||| ||||||||||| ||    
T  3260 aatctaaggtaagggtggga--ctaaccttctttaatcatgagtatataattatgaaaaagggtttaattttgtagttgttgata-gttttgatgttata 3164  T
Q  168 gaattaaggttt 179  Q
    ||| | ||||||    
T  3163 gaagttaggttt 3152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 68 - 179
Target Start/End: Complemental strand, 23669 - 23561
Alignment:
Q  68 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 167  Q
    ||||||||||||||||||||  || ||||||||||||||| ||||| |||| || || ||||||||||| ||||||||||||||| ||||||||||| ||    
T  23669 aatctaaggtaagggtggga--ctgaccttctttaatcatgagtatataattctaaaaaagggtttaattttgtagttgttaata-gttttgatgttata 23573  T
Q  168 gaattaaggttt 179  Q
    ||| | ||||||    
T  23572 gaagttaggttt 23561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 277 - 373
Target Start/End: Complemental strand, 30532 - 30436
Alignment:
Q  277 aatgatgattgatttggctatgatatgtatacatgaaaagtggattaactaggcgtaaatgattaatc-tctcaaatgctaattgtgctaaatgaagt 373  Q
    ||||||| || ||||||||| ||||||||||| | ||| ||||||||||||||||||||||||||||| | |||||||||||||||  ||||||||||    
T  30532 aatgatggttaatttggctacgatatgtatactt-aaatgtggattaactaggcgtaaatgattaatcgtttcaaatgctaattgtaataaatgaagt 30436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 443 - 489
Target Start/End: Complemental strand, 30307 - 30261
Alignment:
Q  443 gatgttgactagtgacgatgaaaatatatatgtataaagtgatgatg 489  Q
    |||||||  |||||||||| ||| |||||||||||||||||||||||    
T  30307 gatgttggttagtgacgataaaattatatatgtataaagtgatgatg 30261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1939 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold1939
Description:

Target: scaffold1939; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 70 - 215
Target Start/End: Complemental strand, 181 - 38
Alignment:
Q  70 tctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtaga 169  Q
    ||||||||||||||||||  |||||||||||||||||| ||||| |  | ||||| |||||||| |  ||||||||||||||| ||||||||||| ||||    
T  181 tctaaggtaagggtggga--ctaaccttctttaatcattagtatatggttctgaaaaagggttttaatttgtagttgttaata-gttttgatgttataga 85  T
Q  170 attaaggtttgaaact-aaaattgatcgtagaaagagtagataatcc 215  Q
    | | ||| || ||| | ||||||||| || |||||||||| ||||||    
T  84 agttagggttaaaattgaaaattgattgttgaaagagtaggtaatcc 38  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 68 - 179
Target Start/End: Original strand, 7510 - 7618
Alignment:
Q  68 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 167  Q
    ||||||||||||||||||||  ||||||||||||||| || ||||| | || ||||| ||||||||||| || |||||||| ||| ||||||||||| ||    
T  7510 aatctaaggtaagggtggga--ctaaccttctttaattatgagtatatgattctgaaaaagggtttaattttatagttgttgata-gttttgatgttata 7606  T
Q  168 gaattaaggttt 179  Q
    ||| | ||||||    
T  7607 gaagttaggttt 7618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 68 - 179
Target Start/End: Original strand, 59652 - 59760
Alignment:
Q  68 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 167  Q
    |||||||||||||||||||   |||||||||||||||||| ||||| |||| ||||| ||||||||||  ||||||||||| ||| |||||||| || ||    
T  59652 aatctaaggtaagggtgggt--ctaaccttctttaatcatgagtatataattctgaaaaagggtttaactttgtagttgttgata-gttttgatattata 59748  T
Q  168 gaattaaggttt 179  Q
    ||| | ||||||    
T  59749 gaaattaggttt 59760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1102 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold1102
Description:

Target: scaffold1102; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 68 - 152
Target Start/End: Original strand, 1947 - 2029
Alignment:
Q  68 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaata 152  Q
    |||||||||||| |||||||  |||||||||||||||||| ||| | |||| ||||| ||||||||||| |||| ||||||||||    
T  1947 aatctaaggtaacggtggga--ctaaccttctttaatcatgagtctataattctgaaaaagggtttaattttgttgttgttaata 2029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 61 - 148
Target Start/End: Complemental strand, 28614 - 28528
Alignment:
Q  61 atcatctaatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatc-ttgtagttgtt 148  Q
    |||||||||||||||||||| ||||||  ||||||||| |||||||| ||||| |||| ||||| |||||||||| | |||||||||||    
T  28614 atcatctaatctaaggtaagagtggga--ctaaccttccttaatcatgagtatataattctgaaaaagggtttaacctttgtagttgtt 28528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1800 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold1800
Description:

Target: scaffold1800; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 182
Target Start/End: Complemental strand, 663 - 552
Alignment:
Q  68 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 167  Q
    ||||||||||||||||||||  |||||||||||||||||| ||| | |||| || || || |||||||| |||| |||||| |||  |||||||||| ||    
T  663 aatctaaggtaagggtggga--ctaaccttctttaatcatgagtctataattcttaaaaatggtttaattttgttgttgttgata-attttgatgttata 567  T
Q  168 gaattaaggtttgaa 182  Q
    ||| | |||||||||    
T  566 gaagttaggtttgaa 552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 46 - 148
Target Start/End: Original strand, 2174 - 2275
Alignment:
Q  46 cggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataag-tatgtaatcctgaagaagggtttaatcttgtagt 144  Q
    |||||||| ||||||||||||||| |||||||||||||||  ||||||  |||| ||||  |||| | | |||| ||||| |||||||||| ||||||||    
T  2174 cggtagaaccttgcgatcatctaacctaaggtaagggtgg--gactaattttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagt 2271  T
Q  145 tgtt 148  Q
    ||||    
T  2272 tgtt 2275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 46 - 148
Target Start/End: Original strand, 5279 - 5380
Alignment:
Q  46 cggtagaatcttgcgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagta-tgtaatcctgaagaagggtttaatcttgtagt 144  Q
    |||||||| ||||||||||||||| |||||||||||||||||  ||||| |||| ||||  |||||  | |||| || || |||||||||| ||||||||    
T  5279 cggtagaaccttgcgatcatctaacctaaggtaagggtggga--ctaactttctctaattttaagttgtataattcttaaaaagggtttaaccttgtagt 5376  T
Q  145 tgtt 148  Q
    ||||    
T  5377 tgtt 5380  T

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Target: scaffold0516; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 5182 - 5223
Alignment:
Q  46 cggtagaatcttgcgatcatctaatctaaggtaagggtggga 87  Q
    |||||||| ||||||||||||||| |||||||||||||||||    
T  5182 cggtagaaccttgcgatcatctaacctaaggtaagggtggga 5223  T

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Target: scaffold0213 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 59 - 176
Target Start/End: Complemental strand, 19272 - 19157
Alignment:
Q  59 cgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataagta-tgtaatcctgaagaagggtttaatcttgtagttgttaataggttt 157  Q
    |||| ||||||||||| ||||||||||||  ||||| |||| ||||  |||||  | |||| ||||| |||||||||| ||||||||||||| || ||||    
T  19272 cgatgatctaatctaacgtaagggtggga--ctaactttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagttgttatta-gttt 19176  T
Q  158 tgatgttgtagaattaagg 176  Q
    ||||||| ||||| |||||    
T  19175 tgatgttatagaaataagg 19157  T

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Target: scaffold0145 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 121 - 164
Target Start/End: Complemental strand, 8129 - 8086
Alignment:
Q  121 tgaagaagggtttaatcttgtagttgttaataggttttgatgtt 164  Q
    |||| |||||||||| ||||||||||||||||||||||||||||    
T  8129 tgaaaaagggtttaaccttgtagttgttaataggttttgatgtt 8086  T

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Target: scaffold0120 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 121 - 164
Target Start/End: Complemental strand, 29316 - 29273
Alignment:
Q  121 tgaagaagggtttaatcttgtagttgttaataggttttgatgtt 164  Q
    |||| |||||||||| ||||||||||||||||||||||||||||    
T  29316 tgaaaaagggtttaaccttgtagttgttaataggttttgatgtt 29273  T

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Target: scaffold0059 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 68 - 170
Target Start/End: Complemental strand, 49785 - 49686
Alignment:
Q  68 aatctaaggtaagggtgggagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgta 167  Q
    ||||||||||||||||||||  |||||||||||||||||| |||   |||| ||||| ||||||||||| || |  ||||| ||| ||||||||||| ||    
T  49785 aatctaaggtaagggtggga--ctaaccttctttaatcatgagtccataattctgaaaaagggtttaattttatttttgttgata-gttttgatgttata 49689  T

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Target: scaffold0016 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 319 - 410
Target Start/End: Complemental strand, 17893 - 17799
Alignment:
Q  319 gattaactaggcgtaaatgattaatc-tctcaaatgctaattgtgctaaatga--agttgctacttatttgatgtggtaaatgtttgatgatgat 410  Q
    ||||||||||| |||||||||||||| ||| |||||||| || ||||||||||  |  || |  || ||||||||||||||||||||||||||||    
T  17893 gattaactaggtgtaaatgattaatcgtctaaaatgctatttttgctaaatgaacatatgttgattctttgatgtggtaaatgtttgatgatgat 17799  T

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Target: scaffold0300 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 297 - 373
Target Start/End: Original strand, 14015 - 14092
Alignment:
Q  297 tgatatgtatacatgaaaagtggattaactaggcgtaaatgattaatc-tctcaaatgctaattgtgctaaatgaagt 373  Q
    ||||||| | || ||||| ||||||||||||||| ||||||||||||| |||  |||||||||| || ||||||||||    
T  14015 tgatatgcaaacctgaaatgtggattaactaggcataaatgattaatcgtctttaatgctaattttgttaaatgaagt 14092  T

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Target: scaffold0203 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 59 - 170
Target Start/End: Original strand, 17927 - 18036
Alignment:
Q  59 cgatcatctaatctaaggtaagggtgggagactaaccttctttaatcataag-tatgtaatcctgaagaagggtttaatcttgtagttgttaataggttt 157  Q
    |||||||||||||||||||||||||||  ||||||| |||| ||||  |||| | | |||| ||||| |||| ||||| ||||||||||||  || ||||    
T  17927 cgatcatctaatctaaggtaagggtgg--gactaactttctctaattctaagttgtataattctgaaaaaggatttaaccttgtagttgttgtta-gttt 18023  T
Q  158 tgatgttgtagaa 170  Q
    ||||||| |||||    
T  18024 tgatgttatagaa 18036  T

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Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 328262 - 328303
Alignment:
Q  46 cggtagaatcttgcgatcatctaatctaaggtaagggtggga 87  Q
    |||||||| ||||||||||||||| |||||||||||||||||    
T  328262 cggtagaaccttgcgatcatctaacctaaggtaagggtggga 328303  T

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Target: scaffold0628 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 87
Target Start/End: Original strand, 1034 - 1073
Alignment:
Q  48 gtagaatcttgcgatcatctaatctaaggtaagggtggga 87  Q
    |||||| ||| |||||||||||||||||||||||||||||    
T  1034 gtagaaccttccgatcatctaatctaaggtaagggtggga 1073  T

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Target: scaffold0594 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 2189 - 2146
Alignment:
Q  177 tttgaaactaaaattgatcgtagaaagagtagataatccgatga 220  Q
    |||||||||||||||||| || |||||||||| |||||||||||    
T  2189 tttgaaactaaaattgattgttgaaagagtaggtaatccgatga 2146  T

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Target: scaffold0485 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 422
Target Start/End: Complemental strand, 4496 - 4457
Alignment:
Q  383 tttgatgtggtaaatgtttgatgatgatttttgatgatga 422  Q
    ||||||||||||| ||||||||||||||| ||||||||||    
T  4496 tttgatgtggtaattgtttgatgatgattattgatgatga 4457  T

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Target: scaffold0056 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 84
Target Start/End: Complemental strand, 18353 - 18315
Alignment:
Q  46 cggtagaatcttgcgatcatctaatctaaggtaagggtg 84  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  18353 cggtagaaccttgcgatcatctaacctaaggtaagggtg 18315  T

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Target: scaffold0555 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 8722 - 8758
Alignment:
Q  48 gtagaatcttgcgatcatctaatctaaggtaagggtg 84  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  8722 gtagaaccttccgatcatctaatctaaggtaagggtg 8758  T

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Target: scaffold0328 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 18627 - 18655
Alignment:
Q  59 cgatcatctaatctaaggtaagggtggga 87  Q
    |||||||||||||||||||||||||||||    
T  18627 cgatcatctaatctaaggtaagggtggga 18655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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