View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12750_low_5 (Length: 460)

Name: NF12750_low_5
Description: NF12750
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12750_low_5
NF12750_low_5
[»] scaffold0256 (2 HSPs)
scaffold0256 (20-280)||(11197-11495)
scaffold0256 (279-449)||(10946-11114)
[»] chr7 (4 HSPs)
chr7 (282-423)||(48298561-48298702)
chr7 (176-280)||(48298788-48298893)
chr7 (134-179)||(48298910-48298955)
chr7 (65-109)||(48298998-48299042)
[»] chr2 (8 HSPs)
chr2 (282-423)||(233445-233586)
chr2 (176-280)||(21629176-21629281)
chr2 (289-396)||(21629371-21629478)
chr2 (34-109)||(21628996-21629071)
chr2 (59-109)||(233882-233932)
chr2 (119-173)||(21629099-21629153)
chr2 (176-280)||(233672-233777)
chr2 (134-179)||(233794-233839)
[»] chr1 (4 HSPs)
chr1 (282-423)||(7391909-7392050)
chr1 (59-109)||(7391563-7391613)
chr1 (134-179)||(7391656-7391701)
chr1 (176-280)||(7391718-7391823)
[»] chr6 (15 HSPs)
chr6 (20-109)||(16874085-16874174)
chr6 (20-109)||(16580225-16580314)
chr6 (176-280)||(16580419-16580523)
chr6 (176-280)||(16614857-16614961)
chr6 (20-109)||(16615066-16615155)
chr6 (176-280)||(16874279-16874383)
chr6 (55-108)||(16572274-16572327)
chr6 (285-373)||(16977314-16977403)
chr6 (119-177)||(16874202-16874260)
chr6 (119-179)||(16572356-16572416)
chr6 (119-179)||(16580342-16580402)
chr6 (119-179)||(16614978-16615038)
chr6 (176-239)||(16572433-16572495)
chr6 (242-280)||(16977492-16977530)
chr6 (34-95)||(16977698-16977759)


Alignment Details
Target: scaffold0256 (Bit Score: 150; Significance: 4e-79; HSPs: 2)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 20 - 280
Target Start/End: Complemental strand, 11495 - 11197
Alignment:
Q  20 ctaagcatgcgtttatttaacataacaattaactctttatttacttatctttcaggaaaggttggaaagaagcatgcagatgccatatcaaaga---ata 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |     |||    
T  11495 ctaagcatgcgtttatttaacataacaattaactctttatttacttatctttcaggaaaggttggaaagaagcatgcagatgccatatcatatgcatata 11396  T
Q  117 a---------------gatcagtgtatctagtatctgctatgctactggaagttcccaatattgcagccaatgttcat--------------------ca 181  Q
    |               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                    ||    
T  11395 aatctcgatctcctaggatcagtgtatctagtatctgctatgctactggaagttcccaatattgcagccaatgttcatgatgcgaagcataagatcatca 11296  T
Q  182 gtaacaatttccttcgcttgctcaagatcagtgacaaaataacattcaacggtcctcctgaaatgttaaggatcatgtcatggttgtcacaaggcttct 280  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11295 gtaacaatttccttcgcttgctcgagatcagtgacaaaaaaacattcaacggtcctcctgaaatgttaaggatcatgtcatggttgtcacaaggcttct 11197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 279 - 449
Target Start/End: Complemental strand, 11114 - 10946
Alignment:
Q  279 ctcgaaatgctgaaggacaaaatcaaagaggtggcacttaggacatacttatttacgtcctcttcatcatatgattctttgagcgtggatcagctcgaaa 378  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||  |||||||||||||||| ||||    
T  11114 ctcgaaatgctgaaggacaaaatcaaagaggtggcacttaggacatacttatttacctcctcttcatcatacgattc--tgagcgtggatcagctagaaa 11017  T
Q  379 attatttcgacatctctcctctttgtgttcatgttattgtcagtaagagtttaaagaatgacgagcttcat 449  Q
    ||||||||||| ||||||||||| ||||||||| |||||| | ||||||||||| |||||| |||||||||    
T  11016 attatttcgacctctctcctcttcgtgttcatgctattgtaattaagagtttaatgaatgatgagcttcat 10946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 9e-34; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 282 - 423
Target Start/End: Complemental strand, 48298702 - 48298561
Alignment:
Q  282 gaaatgctgaaggacaaaatcaaagaggtggcacttaggacatacttatttacgtcctcttcatcatatgattctttgagcgtggatcagctcgaaaatt 381  Q
    ||||||||||||||||||||||| |||| ||| |||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||  |||||    
T  48298702 gaaatgctgaaggacaaaatcaaggaggaggcgcttaggacatacctatttaccttctcttcatcatatgattctttgagcgtggatcagctcacaaatt 48298603  T
Q  382 atttcgacatctctcctctttgtgttcatgttattgtcagta 423  Q
     ||||||  |||||| || | ||| ||||  |||||||||||    
T  48298602 ttttcgatctctctcttcctcgtgctcatagtattgtcagta 48298561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 176 - 280
Target Start/End: Complemental strand, 48298893 - 48298788
Alignment:
Q  176 tcatcagtaacaatttccttcgcttgctcaagatcagtgacaaaataacattcaacggtcctcctgaaa-tgttaaggatcatgtcatggttgtcacaag 274  Q
    |||||||||| |||||||  ||||||||  || ||||||| |||  |||||||| |||||||||||||| ||| | ||||||||| |||| || ||||||    
T  48298893 tcatcagtaagaatttccgccgcttgcttgaggtcagtgagaaacaaacattcaccggtcctcctgaaactgtcagggatcatgttatggctgccacaag 48298794  T
Q  275 gcttct 280  Q
    | ||||    
T  48298793 ggttct 48298788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 48298955 - 48298910
Alignment:
Q  134 atctgctatgctactggaagttcccaatattgcagccaatgttcat 179  Q
    |||||||||||| |||||||||||||| || |||||||||||||||    
T  48298955 atctgctatgctgctggaagttcccaacatggcagccaatgttcat 48298910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 48299042 - 48298998
Alignment:
Q  65 tatctttcaggaaaggttggaaagaagcatgcagatgccatatca 109  Q
    |||||||||||||||||||||||||||   |||||||||||||||    
T  48299042 tatctttcaggaaaggttggaaagaagacggcagatgccatatca 48298998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 9e-34; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 282 - 423
Target Start/End: Complemental strand, 233586 - 233445
Alignment:
Q  282 gaaatgctgaaggacaaaatcaaagaggtggcacttaggacatacttatttacgtcctcttcatcatatgattctttgagcgtggatcagctcgaaaatt 381  Q
    ||||||||||||||||||||||| |||| ||| |||||||||||| ||||||| | |||||||||||||||||||||||| ||||||||||||  |||||    
T  233586 gaaatgctgaaggacaaaatcaaggaggaggcgcttaggacatacctatttactttctcttcatcatatgattctttgagtgtggatcagctcacaaatt 233487  T
Q  382 atttcgacatctctcctctttgtgttcatgttattgtcagta 423  Q
     ||||||  |||||| || | ||||||||  |||||||||||    
T  233486 ttttcgatctctctcttcctcgtgttcatagtattgtcagta 233445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 176 - 280
Target Start/End: Original strand, 21629176 - 21629281
Alignment:
Q  176 tcatcagtaacaatttccttcgcttgctcaagatcagtgacaaaataacattcaacggtcctcctg-aaatgttaaggatcatgtcatggttgtcacaag 274  Q
    |||||||||| ||||||| |||||||||| |||| |||||||||| |||||||||||||||||||| |||||||| ||||||||| |||| |||||||||    
T  21629176 tcatcagtaagaatttccatcgcttgctcgagataagtgacaaaagaacattcaacggtcctcctgaaaatgttagggatcatgttatggctgtcacaag 21629275  T
Q  275 gcttct 280  Q
     |||||    
T  21629276 acttct 21629281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 289 - 396
Target Start/End: Original strand, 21629371 - 21629478
Alignment:
Q  289 tgaaggacaaaatcaaagaggtggcacttaggacatacttatttacgtcctcttcatcatatgattctttgagcgtggatcagctcgaaaattatttcga 388  Q
    |||||||||||||||| |||| |||||||||||||||| || |||| | ||||||||||||||| ||||||||| |||||||||||| |||  |||||||    
T  21629371 tgaaggacaaaatcaaggaggaggcacttaggacatacctaattaccttctcttcatcatatgaatctttgagcatggatcagctcgcaaaaaatttcga 21629470  T
Q  389 catctctc 396  Q
    | ||||||    
T  21629471 cctctctc 21629478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 109
Target Start/End: Original strand, 21628996 - 21629071
Alignment:
Q  34 atttaacataacaattaactctttatttacttatctttcaggaaaggttggaaagaagcatgcagatgccatatca 109  Q
    ||||||||| |||||||||||||| ||| ||||| |||||||||  |||||||||||||  || ||||||||||||    
T  21628996 atttaacatcacaattaactctttttttccttatatttcaggaattgttggaaagaagccggctgatgccatatca 21629071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 109
Target Start/End: Complemental strand, 233932 - 233882
Alignment:
Q  59 tttacttatctttcaggaaaggttggaaagaagcatgcagatgccatatca 109  Q
    |||| ||||||||||||||||||||||||||||   |||||||||||||||    
T  233932 tttaattatctttcaggaaaggttggaaagaagacggcagatgccatatca 233882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 119 - 173
Target Start/End: Original strand, 21629099 - 21629153
Alignment:
Q  119 atcagtgtatctagtatctgctatgctactggaagttcccaatattgcagccaat 173  Q
    ||||||||||||  ||||||||||| || |||||||||||||||| |||||||||    
T  21629099 atcagtgtatctcatatctgctatggtattggaagttcccaatatggcagccaat 21629153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 176 - 280
Target Start/End: Complemental strand, 233777 - 233672
Alignment:
Q  176 tcatcagtaacaatttccttcgcttgctcaagatcagtgacaaaataacattcaacggtcctcctgaaa-tgttaaggatcatgtcatggttgtcacaag 274  Q
    |||||||||| |||||||  ||||||||  || ||||||| |||  |||||||| |||||||||||||| ||| | ||||||||| |||| || ||||||    
T  233777 tcatcagtaagaatttccgccgcttgcttgaggtcagtgagaaacaaacattcaccggtcctcctgaaactgtcagggatcatgttatggctgccacaag 233678  T
Q  275 gcttct 280  Q
    | ||||    
T  233677 ggttct 233672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 233839 - 233794
Alignment:
Q  134 atctgctatgctactggaagttcccaatattgcagccaatgttcat 179  Q
    |||||||||||| ||||||||||| || || |||||||||||||||    
T  233839 atctgctatgctgctggaagttccaaacatggcagccaatgttcat 233794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 2e-31; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 282 - 423
Target Start/End: Original strand, 7391909 - 7392050
Alignment:
Q  282 gaaatgctgaaggacaaaatcaaagaggtggcacttaggacatacttatttacgtcctcttcatcatatgattctttgagcgtggatcagctcgaaaatt 381  Q
    |||||||| |||||||||||||| || | |||||||||||||||| ||||||| | ||||||||||||||||||||||||||||| |||||||  |||||    
T  7391909 gaaatgcttaaggacaaaatcaaggaagaggcacttaggacatacctatttaccttctcttcatcatatgattctttgagcgtggttcagctcacaaatt 7392008  T
Q  382 atttcgacatctctcctctttgtgttcatgttattgtcagta 423  Q
     ||||||  |||||| || | ||||||||  |||||||||||    
T  7392009 ttttcgatctctctcttcctcgtgttcatagtattgtcagta 7392050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 109
Target Start/End: Original strand, 7391563 - 7391613
Alignment:
Q  59 tttacttatctttcaggaaaggttggaaagaagcatgcagatgccatatca 109  Q
    |||| ||||||||||||||||||||||||||||   |||||||||||||||    
T  7391563 tttaattatctttcaggaaaggttggaaagaagacggcagatgccatatca 7391613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 7391656 - 7391701
Alignment:
Q  134 atctgctatgctactggaagttcccaatattgcagccaatgttcat 179  Q
    |||||||||||| |||||||||||||| || |||||||||||||||    
T  7391656 atctgctatgctgctggaagttcccaacatggcagccaatgttcat 7391701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 280
Target Start/End: Original strand, 7391718 - 7391823
Alignment:
Q  176 tcatcagtaacaatttccttcgcttgctcaagatcagtgacaaaataacattcaacggtcctcctgaaa-tgttaaggatcatgtcatggttgtcacaag 274  Q
    |||||||||| |||||||  ||||||||  || |||| || |||  |||||||| |||||||||||||| ||| | ||||||||| |||| || ||||||    
T  7391718 tcatcagtaagaatttccgacgcttgcttgaggtcagcgagaaacaaacattcaccggtcctcctgaaactgtcagggatcatgttatggctgccacaag 7391817  T
Q  275 gcttct 280  Q
    | ||||    
T  7391818 ggttct 7391823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 5e-29; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 16874085 - 16874174
Alignment:
Q  20 ctaagcatgcgtttatttaacataacaattaactctttatttacttatctttcaggaaaggttggaaagaagcatgcagatgccatatca 109  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||   ||||||||||||||    
T  16874085 ctaagcatgcgtttatttaacgtaacaattaactctttattttcttatctttccggaaaggttggaaagaagccgacagatgccatatca 16874174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 16580225 - 16580314
Alignment:
Q  20 ctaagcatgcgtttatttaacataacaattaactctttatttacttatctttcaggaaaggttggaaagaagcatgcagatgccatatca 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||  ||||   ||||||||||||||    
T  16580225 ctaagcatgcgtttatttaacataacaattaactctttatttacttatctttccggaaaggttgaaatcaagccgacagatgccatatca 16580314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 176 - 280
Target Start/End: Original strand, 16580419 - 16580523
Alignment:
Q  176 tcatcagtaacaatttccttcgcttgctcaagatcagtgacaaaataacattcaacggtcctcctgaaa-tgttaaggatcatgtcatggttgtcacaag 274  Q
    |||||||||| ||||||  |||||||||| ||||||||||||||| |||||||||| ||||||| |||| |||||||||||||||||||||||||||||     
T  16580419 tcatcagtaagaatttcagtcgcttgctcgagatcagtgacaaaa-aacattcaactgtcctcccgaaaatgttaaggatcatgtcatggttgtcacaat 16580517  T
Q  275 gcttct 280  Q
    ||||||    
T  16580518 gcttct 16580523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 176 - 280
Target Start/End: Complemental strand, 16614961 - 16614857
Alignment:
Q  176 tcatcagtaacaatttccttcgcttgctcaagatcagtgacaaaataacattcaacggtcctcctgaaa-tgttaaggatcatgtcatggttgtcacaag 274  Q
    |||||||||| ||||||  |||||||||| ||||||||||||||| |||||||||| ||||||| |||| |||||||||||||||||||||||||||||     
T  16614961 tcatcagtaagaatttcagtcgcttgctcgagatcagtgacaaaa-aacattcaactgtcctcccgaaaatgttaaggatcatgtcatggttgtcacaat 16614863  T
Q  275 gcttct 280  Q
    ||||||    
T  16614862 gcttct 16614857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 16615155 - 16615066
Alignment:
Q  20 ctaagcatgcgtttatttaacataacaattaactctttatttacttatctttcaggaaaggttggaaagaagcatgcagatgccatatca 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||  ||||   ||||||||||||||    
T  16615155 ctaagcatgcgtttatttaacataacaattaactctttatttacttatctttccggaaaggttgaaatcaagccgacagatgccatatca 16615066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 176 - 280
Target Start/End: Original strand, 16874279 - 16874383
Alignment:
Q  176 tcatcagtaacaatttccttcgcttgctcaagatcagtgacaaaataacattcaacggtcctcctgaaa-tgttaaggatcatgtcatggttgtcacaag 274  Q
    |||||||||| ||||||   | ||||||| ||||||||||||||| |||||||||||||||||| |||| ||||| |||||||||||||||||||||||     
T  16874279 tcatcagtaagaatttcagccacttgctcgagatcagtgacaaaa-aacattcaacggtcctcccgaaaatgttatggatcatgtcatggttgtcacaat 16874377  T
Q  275 gcttct 280  Q
    ||||||    
T  16874378 gcttct 16874383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 55 - 108
Target Start/End: Original strand, 16572274 - 16572327
Alignment:
Q  55 tttatttacttatctttcaggaaaggttggaaagaagcatgcagatgccatatc 108  Q
    ||||||||||||||||||||||||||||||||||||||   |||||||||||||    
T  16572274 tttatttacttatctttcaggaaaggttggaaagaagccgacagatgccatatc 16572327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 373
Target Start/End: Complemental strand, 16977403 - 16977314
Alignment:
Q  285 atgctgaagg-acaaaatcaaagaggtggcacttaggacatacttatttacgtcctcttcatcatatgattctttgagcgtggatcagct 373  Q
    |||||||||| | |||||||| |||| | |||||||||||||| ||||||| ||| |||||||| ||||||||| ||| |||||||||||    
T  16977403 atgctgaagggaaaaaatcaaggaggagacacttaggacatacctatttacctccccttcatcacatgattcttagagagtggatcagct 16977314  T

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Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 119 - 177
Target Start/End: Original strand, 16874202 - 16874260
Alignment:
Q  119 atcagtgtatctagtatctgctatgctactggaagttcccaatattgcagccaatgttc 177  Q
    ||||||||||||| |||||| ||||||| ||||||||  ||||||||||||||||||||    
T  16874202 atcagtgtatctaatatctgttatgctattggaagttttcaatattgcagccaatgttc 16874260  T

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Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 16572356 - 16572416
Alignment:
Q  119 atcagtgtatctagtatctgctatgctactggaagttcccaatattgcagccaatgttcat 179  Q
    ||||||||||||| |||||| ||||||| ||||||||  |||||||||||||||| |||||    
T  16572356 atcagtgtatctaatatctgatatgctattggaagttttcaatattgcagccaatattcat 16572416  T

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Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 16580342 - 16580402
Alignment:
Q  119 atcagtgtatctagtatctgctatgctactggaagttcccaatattgcagccaatgttcat 179  Q
    ||||||||||||| |||||| ||||||| ||||||||  |||||||||||| |||||||||    
T  16580342 atcagtgtatctaatatctgttatgctattggaagttttcaatattgcagctaatgttcat 16580402  T

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Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 16615038 - 16614978
Alignment:
Q  119 atcagtgtatctagtatctgctatgctactggaagttcccaatattgcagccaatgttcat 179  Q
    ||||||||||||| |||||| ||||||| ||||||||  |||||||||||| |||||||||    
T  16615038 atcagtgtatctaatatctgttatgctattggaagttttcaatattgcagctaatgttcat 16614978  T

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Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 176 - 239
Target Start/End: Original strand, 16572433 - 16572495
Alignment:
Q  176 tcatcagtaacaatttccttcgcttgctcaagatcagtgacaaaataacattcaacggtcctcc 239  Q
    |||||||||| ||||||  |||||||||| ||||||||||||||| ||||||||||||| ||||    
T  16572433 tcatcagtaagaatttcagtcgcttgctcgagatcagtgacaaaa-aacattcaacggttctcc 16572495  T

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Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 242 - 280
Target Start/End: Complemental strand, 16977530 - 16977492
Alignment:
Q  242 aaatgttaaggatcatgtcatggttgtcacaaggcttct 280  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  16977530 aaatgttaaggatcatgtcatggttgtaacaaggcttct 16977492  T

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Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 16977759 - 16977698
Alignment:
Q  34 atttaacataacaattaactctttatttacttatctttcaggaaaggttggaaagaagcatg 95  Q
    |||||| |||| | |||||||||||||||||||||||| |||||||||  ||| ||||||||    
T  16977759 atttaaaataaaagttaactctttatttacttatcttttaggaaaggtgtgaaggaagcatg 16977698  T

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