View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12751_low_3 (Length: 799)

Name: NF12751_low_3
Description: NF12751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12751_low_3
NF12751_low_3
[»] chr8 (42 HSPs)
chr8 (19-780)||(1423637-1424390)
chr8 (528-671)||(1977210-1977353)
chr8 (508-664)||(24055942-24056098)
chr8 (532-665)||(8903858-8903991)
chr8 (528-671)||(16983394-16983537)
chr8 (531-629)||(8914813-8914911)
chr8 (528-626)||(17499270-17499368)
chr8 (535-629)||(35797437-35797531)
chr8 (528-671)||(28413906-28414049)
chr8 (536-624)||(9952802-9952890)
chr8 (534-666)||(32072102-32072234)
chr8 (528-671)||(34861229-34861365)
chr8 (528-671)||(43506538-43506678)
chr8 (508-581)||(6098794-6098867)
chr8 (530-671)||(35151768-35151909)
chr8 (528-671)||(5979880-5980022)
chr8 (538-623)||(17741574-17741659)
chr8 (199-310)||(10711976-10712088)
chr8 (537-629)||(23685173-23685265)
chr8 (533-629)||(45246476-45246572)
chr8 (534-629)||(31301157-31301251)
chr8 (538-666)||(11962729-11962856)
chr8 (508-611)||(36804856-36804959)
chr8 (528-662)||(41727439-41727573)
chr8 (528-581)||(7493379-7493432)
chr8 (538-629)||(4674952-4675039)
chr8 (528-666)||(6387568-6387705)
chr8 (528-603)||(14236406-14236481)
chr8 (538-624)||(4319780-4319866)
chr8 (546-616)||(9192056-9192126)
chr8 (563-629)||(35689522-35689588)
chr8 (561-626)||(1961327-1961392)
chr8 (508-557)||(5095777-5095826)
chr8 (528-624)||(13407360-13407457)
chr8 (541-610)||(34952504-34952573)
chr8 (562-666)||(43026298-43026400)
chr8 (538-626)||(9193427-9193515)
chr8 (250-310)||(44420639-44420699)
chr8 (562-629)||(1205869-1205936)
chr8 (528-614)||(25915086-25915175)
chr8 (538-605)||(35819198-35819265)
chr8 (250-299)||(16985659-16985708)
[»] chr3 (54 HSPs)
chr3 (528-671)||(41451932-41452075)
chr3 (528-671)||(24734705-24734848)
chr3 (528-671)||(28529253-28529394)
chr3 (528-671)||(20493482-20493625)
chr3 (528-671)||(37776740-37776883)
chr3 (528-671)||(46450067-46450209)
chr3 (528-671)||(46160949-46161090)
chr3 (528-627)||(29588770-29588869)
chr3 (528-629)||(18427187-18427288)
chr3 (508-671)||(48351436-48351599)
chr3 (515-629)||(38414689-38414803)
chr3 (528-629)||(20791338-20791439)
chr3 (508-611)||(2419481-2419584)
chr3 (520-662)||(8825008-8825150)
chr3 (528-671)||(5452099-5452240)
chr3 (529-629)||(22604602-22604702)
chr3 (528-665)||(55452052-55452187)
chr3 (538-623)||(19345047-19345132)
chr3 (528-664)||(50156697-50156831)
chr3 (535-671)||(29755500-29755636)
chr3 (528-612)||(52123993-52124077)
chr3 (528-629)||(14236061-14236162)
chr3 (237-310)||(50056893-50056966)
chr3 (540-628)||(26310495-26310583)
chr3 (520-607)||(10948589-10948676)
chr3 (528-666)||(27243050-27243189)
chr3 (528-590)||(24429062-24429124)
chr3 (222-310)||(28095952-28096039)
chr3 (563-673)||(30624631-30624739)
chr3 (522-573)||(38138613-38138664)
chr3 (528-666)||(41387568-41387704)
chr3 (538-612)||(49072064-49072138)
chr3 (520-658)||(138778-138914)
chr3 (554-629)||(7419241-7419316)
chr3 (528-623)||(15790407-15790501)
chr3 (539-582)||(22856282-22856325)
chr3 (528-626)||(44844026-44844125)
chr3 (538-628)||(50661568-50661659)
chr3 (528-602)||(752461-752535)
chr3 (531-581)||(29388634-29388684)
chr3 (533-607)||(39186028-39186102)
chr3 (528-582)||(43016502-43016556)
chr3 (198-244)||(50057279-50057325)
chr3 (534-666)||(13809087-13809219)
chr3 (542-660)||(40702173-40702289)
chr3 (542-629)||(41707490-41707577)
chr3 (562-629)||(43657067-43657134)
chr3 (165-244)||(50057409-50057488)
chr3 (263-310)||(50061382-50061429)
chr3 (528-570)||(742057-742099)
chr3 (508-665)||(40715879-40716036)
chr3 (538-583)||(41607499-41607544)
chr3 (544-629)||(42340873-42340958)
chr3 (588-629)||(46237143-46237184)
[»] chr6 (24 HSPs)
chr6 (528-666)||(34905341-34905479)
chr6 (531-623)||(16852013-16852105)
chr6 (521-661)||(10133188-10133328)
chr6 (528-671)||(445818-445961)
chr6 (530-629)||(5106340-5106439)
chr6 (528-663)||(31116161-31116296)
chr6 (528-629)||(21987334-21987435)
chr6 (528-661)||(1392640-1392770)
chr6 (538-623)||(32122843-32122928)
chr6 (508-629)||(32598965-32599086)
chr6 (508-624)||(32112734-32112850)
chr6 (537-624)||(12780805-12780892)
chr6 (534-611)||(12784982-12785059)
chr6 (528-629)||(2675937-2676038)
chr6 (528-582)||(16187469-16187523)
chr6 (528-582)||(16187687-16187741)
chr6 (538-666)||(35128769-35128898)
chr6 (528-629)||(19090251-19090353)
chr6 (520-577)||(17144700-17144757)
chr6 (528-561)||(34882267-34882300)
chr6 (528-671)||(12753797-12753940)
chr6 (528-583)||(8441886-8441941)
chr6 (528-583)||(8450690-8450745)
chr6 (638-671)||(12753758-12753791)
[»] chr4 (49 HSPs)
chr4 (508-628)||(39471200-39471320)
chr4 (520-665)||(43771132-43771277)
chr4 (528-668)||(20454543-20454681)
chr4 (530-662)||(10169684-10169814)
chr4 (528-666)||(8108961-8109099)
chr4 (529-671)||(50164395-50164537)
chr4 (528-629)||(722199-722300)
chr4 (528-629)||(47009231-47009332)
chr4 (528-671)||(33653526-33653669)
chr4 (535-671)||(49077249-49077385)
chr4 (528-629)||(754617-754718)
chr4 (533-671)||(20225383-20225519)
chr4 (530-624)||(24834625-24834719)
chr4 (528-671)||(26361345-26361480)
chr4 (508-629)||(24938432-24938553)
chr4 (530-629)||(50481584-50481683)
chr4 (528-629)||(49242212-49242313)
chr4 (522-628)||(22542424-22542530)
chr4 (508-661)||(19937189-19937341)
chr4 (528-629)||(34129437-34129538)
chr4 (508-629)||(52671872-52671993)
chr4 (508-629)||(37451030-37451149)
chr4 (531-629)||(48339380-48339478)
chr4 (536-629)||(38636379-38636472)
chr4 (532-623)||(31250924-31251015)
chr4 (538-624)||(38537560-38537649)
chr4 (532-621)||(45310989-45311078)
chr4 (250-310)||(11393149-11393209)
chr4 (250-310)||(11402876-11402936)
chr4 (528-671)||(40991626-40991769)
chr4 (547-662)||(46242000-46242113)
chr4 (538-629)||(5044587-5044678)
chr4 (538-629)||(49682838-49682929)
chr4 (550-665)||(50571870-50571985)
chr4 (528-574)||(11895134-11895180)
chr4 (508-629)||(13069983-13070104)
chr4 (508-629)||(25719129-25719251)
chr4 (528-629)||(51206085-51206187)
chr4 (536-613)||(13520007-13520084)
chr4 (538-630)||(18421878-18421968)
chr4 (588-629)||(21776942-21776983)
chr4 (541-662)||(33995985-33996106)
chr4 (562-671)||(47237812-47237921)
chr4 (558-629)||(30866999-30867070)
chr4 (530-625)||(50652375-50652470)
chr4 (530-612)||(46536301-46536383)
chr4 (530-580)||(52279298-52279348)
chr4 (539-580)||(46287532-46287573)
chr4 (588-629)||(48608122-48608163)
[»] chr1 (50 HSPs)
chr1 (489-629)||(32211786-32211922)
chr1 (528-671)||(41958085-41958226)
chr1 (528-671)||(26980299-26980442)
chr1 (513-623)||(33193098-33193208)
chr1 (528-629)||(30678948-30679049)
chr1 (528-629)||(41948183-41948284)
chr1 (528-629)||(19101638-19101739)
chr1 (528-671)||(2225226-2225367)
chr1 (536-671)||(6325858-6325990)
chr1 (531-671)||(11987626-11987766)
chr1 (536-629)||(1093118-1093211)
chr1 (530-623)||(39499442-39499535)
chr1 (490-671)||(6133628-6133804)
chr1 (528-620)||(8899065-8899157)
chr1 (537-629)||(22540410-22540502)
chr1 (531-612)||(10659808-10659889)
chr1 (528-665)||(28218085-28218222)
chr1 (527-671)||(3872670-3872813)
chr1 (537-629)||(15523252-15523344)
chr1 (537-629)||(15531246-15531338)
chr1 (520-576)||(37552978-37553034)
chr1 (508-671)||(8741240-8741405)
chr1 (540-629)||(49730906-49730995)
chr1 (508-660)||(51732290-51732440)
chr1 (520-626)||(31866361-31866466)
chr1 (528-622)||(33114020-33114114)
chr1 (513-565)||(16948551-16948603)
chr1 (528-624)||(29673522-29673618)
chr1 (533-629)||(37525571-37525667)
chr1 (530-671)||(931374-931515)
chr1 (532-629)||(15468262-15468359)
chr1 (545-626)||(46335142-46335223)
chr1 (263-310)||(1286185-1286232)
chr1 (536-615)||(45179291-45179370)
chr1 (528-629)||(13114706-13114808)
chr1 (528-629)||(41918037-41918139)
chr1 (528-629)||(15928597-15928698)
chr1 (508-624)||(15906458-15906573)
chr1 (538-629)||(29418523-29418615)
chr1 (534-666)||(35336871-35336997)
chr1 (528-623)||(39974237-39974326)
chr1 (528-583)||(12767365-12767420)
chr1 (532-579)||(15906632-15906679)
chr1 (538-581)||(44272008-44272051)
chr1 (538-629)||(50539166-50539257)
chr1 (528-629)||(11135781-11135883)
chr1 (588-629)||(15660935-15660976)
chr1 (530-603)||(27570293-27570366)
chr1 (508-557)||(33113990-33114039)
chr1 (528-581)||(47644334-47644387)
[»] chr2 (40 HSPs)
chr2 (508-629)||(44274276-44274397)
chr2 (530-629)||(9470123-9470222)
chr2 (528-671)||(26767798-26767941)
chr2 (508-666)||(6980137-6980295)
chr2 (528-671)||(12989191-12989334)
chr2 (508-671)||(45554567-45554722)
chr2 (508-624)||(25238294-25238411)
chr2 (516-665)||(34142164-34142313)
chr2 (532-603)||(7919311-7919382)
chr2 (530-629)||(19639135-19639234)
chr2 (530-629)||(19837728-19837827)
chr2 (694-780)||(2816572-2816656)
chr2 (528-661)||(35316438-35316569)
chr2 (561-661)||(2476546-2476644)
chr2 (528-629)||(11539465-11539569)
chr2 (520-624)||(12098895-12099000)
chr2 (532-612)||(38464222-38464302)
chr2 (528-607)||(10981582-10981661)
chr2 (537-671)||(18511255-18511389)
chr2 (520-592)||(472192-472264)
chr2 (508-666)||(16719447-16719605)
chr2 (522-624)||(30849284-30849386)
chr2 (538-628)||(32701513-32701603)
chr2 (538-624)||(37652292-37652378)
chr2 (538-662)||(17188076-17188198)
chr2 (528-671)||(32856172-32856319)
chr2 (528-661)||(36471875-36472008)
chr2 (528-576)||(4552877-4552925)
chr2 (202-305)||(25476329-25476432)
chr2 (516-578)||(14489564-14489626)
chr2 (536-602)||(15884498-15884564)
chr2 (237-310)||(17508848-17508921)
chr2 (528-624)||(43414402-43414498)
chr2 (528-629)||(28898073-28898175)
chr2 (588-629)||(41805873-41805914)
chr2 (528-666)||(24895303-24895440)
chr2 (508-558)||(25730456-25730506)
chr2 (538-576)||(30718374-30718412)
chr2 (532-629)||(42182931-42183029)
chr2 (250-310)||(38500219-38500282)
[»] chr7 (44 HSPs)
chr7 (528-673)||(46517291-46517434)
chr7 (528-616)||(27888337-27888425)
chr7 (531-671)||(31502504-31502644)
chr7 (528-671)||(32205079-32205219)
chr7 (528-671)||(22189939-22190082)
chr7 (520-661)||(7459353-7459494)
chr7 (490-624)||(25686838-25686968)
chr7 (523-671)||(33008104-33008252)
chr7 (530-629)||(7775042-7775140)
chr7 (528-666)||(12263473-12263611)
chr7 (528-662)||(27949282-27949416)
chr7 (520-612)||(6442224-6442316)
chr7 (528-671)||(14795131-14795274)
chr7 (528-671)||(15242123-15242266)
chr7 (528-626)||(32212907-32213004)
chr7 (528-629)||(11692221-11692322)
chr7 (528-629)||(11824113-11824214)
chr7 (528-671)||(48374476-48374617)
chr7 (532-615)||(23564076-23564159)
chr7 (528-665)||(19422871-19423008)
chr7 (520-666)||(39254088-39254234)
chr7 (530-656)||(32178843-32178966)
chr7 (201-286)||(39364335-39364420)
chr7 (528-629)||(44350839-44350940)
chr7 (522-626)||(10933996-10934100)
chr7 (560-671)||(12270988-12271096)
chr7 (538-662)||(25092708-25092832)
chr7 (528-629)||(24539159-24539261)
chr7 (536-581)||(36845567-36845612)
chr7 (538-629)||(19494385-19494477)
chr7 (554-662)||(44510999-44511107)
chr7 (528-629)||(17749736-17749838)
chr7 (513-570)||(1316374-1316431)
chr7 (528-581)||(6580039-6580092)
chr7 (570-671)||(8073367-8073468)
chr7 (536-613)||(9648982-9649059)
chr7 (530-566)||(36845530-36845566)
chr7 (520-559)||(12167319-12167358)
chr7 (528-626)||(17354563-17354662)
chr7 (528-606)||(1688048-1688126)
chr7 (528-629)||(25428515-25428617)
chr7 (528-570)||(31874117-31874159)
chr7 (532-581)||(3855851-3855900)
chr7 (528-612)||(13919839-13919924)
[»] chr5 (34 HSPs)
chr5 (528-671)||(10142013-10142154)
chr5 (528-671)||(28490759-28490902)
chr5 (529-622)||(39246657-39246750)
chr5 (531-629)||(34368402-34368500)
chr5 (528-629)||(5413774-5413875)
chr5 (520-629)||(25710501-25710610)
chr5 (530-665)||(28090268-28090401)
chr5 (530-629)||(17537141-17537240)
chr5 (536-629)||(41330438-41330531)
chr5 (530-629)||(43405435-43405534)
chr5 (531-629)||(27592492-27592590)
chr5 (528-630)||(37455390-37455491)
chr5 (528-629)||(30325911-30326012)
chr5 (536-626)||(28434863-28434951)
chr5 (528-628)||(41105607-41105707)
chr5 (532-671)||(28611819-28611958)
chr5 (520-626)||(34384720-34384826)
chr5 (165-312)||(1678916-1679066)
chr5 (536-624)||(1923597-1923685)
chr5 (530-666)||(25630812-25630948)
chr5 (538-581)||(31885878-31885921)
chr5 (520-622)||(10666717-10666819)
chr5 (530-663)||(17434888-17435019)
chr5 (535-628)||(28155746-28155837)
chr5 (528-629)||(42224627-42224729)
chr5 (528-579)||(28223813-28223864)
chr5 (538-581)||(36337937-36337980)
chr5 (534-612)||(10950145-10950223)
chr5 (538-612)||(25919270-25919344)
chr5 (528-581)||(14553602-14553655)
chr5 (566-627)||(43541895-43541956)
chr5 (528-627)||(24915099-24915199)
chr5 (530-624)||(2525621-2525715)
chr5 (538-592)||(4427321-4427375)
[»] scaffold0018 (1 HSPs)
scaffold0018 (520-625)||(27858-27963)
[»] scaffold0204 (1 HSPs)
scaffold0204 (531-629)||(26902-27000)
[»] scaffold0543 (1 HSPs)
scaffold0543 (534-629)||(9706-9801)
[»] scaffold0492 (1 HSPs)
scaffold0492 (534-629)||(11252-11347)
[»] scaffold0245 (1 HSPs)
scaffold0245 (263-310)||(12452-12499)
[»] scaffold0118 (1 HSPs)
scaffold0118 (251-310)||(18936-18995)


Alignment Details
Target: chr8 (Bit Score: 593; Significance: 0; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 593; E-Value: 0
Query Start/End: Original strand, 19 - 780
Target Start/End: Complemental strand, 1424390 - 1423637
Alignment:
Q  19 gatgaacagtggcgtactacggaaagtgcactcggaatgaacagtacttgcgataaacagtttgcatggtgaatagtgttttctaatgaacagggctttt 118  Q
    |||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1424390 gatgaacagtggcgcactatggaaagtgcactcgaaatgaacagtacttgcgataaacagtgtgcatggtgaatagtgttttctaatgaacagggctttt 1424291  T
Q  119 aggatctcaaagagtccgcgatgaaggcaaaaactcacaataaagacgaaaaaagcaaaagtaattgcaaggactgcaactagggtttatgcggaaacaa 218  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||  | ||| ||||||||||||||||||||||||||||    
T  1424290 aggatctcaaagagtccgcgatgaacgcataaactcacaataaagacgaaaaaagcaaaagtaaccgaaag-actgcaactagggtttatgcggaaacaa 1424192  T
Q  219 gaccccccaagatcaggagctctgatgccacgtgaaaactaaacattatatttcagagataaaaaatgcacaactactaatgtgtttatatatataggga 318  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||  ||||    
T  1424191 gacctcccaagatcgggagctctgatgccacgtgaaaactaaacattatatttcagagacaaaaaatgtacaactactaatgtgtttatatata--ggga 1424094  T
Q  319 tccagctccccaagaaatattcattttgctactagcagggggaaaatattcatacggagataaaaaa-tagctataatcattttgctactggcaggggag 417  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  1424093 tccagctctccaagaaatattcattttgctactagcaggggaaaaatattcatacggagataaaaaaatagctataatcattttgctactagcaggggag 1423994  T
Q  418 tatgttattcttgtcataggattgaactgaaatcggcaaagctttataagagtatttattgtccctaattaattagcaacactctcttaattttaaacat 517  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1423993 tatgttattcttgtcataggattgaactgaaatcggcaaagctttataagagtacttattgtccctaattaattagcaacactctcttaattttaaacat 1423894  T
Q  518 tttctttaaaactcactctcttattggtttaaatcattgtggat---ctacactttgaaaattgaactcttacaaagtggttggacatacattgatttta 614  Q
    ||||| ||||| ||| ||||||||         ||||||||| |   |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1423893 tttctctaaaattcattctcttat---------tcattgtgggtctactacactttgaaaattgaactcttacaaagtggttggacatacattgatttta 1423803  T
Q  615 tctaataaaagagtgtaaatactagagagtgttgaaaagtgagtgttgctagtattcatggaacatgttacatatatattggatctttgatctttcttgg 714  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1423802 tctaataaaagagtgtaaatactaaagagtgttgaaaagtgagtgttgctagtattcatggaacatgtcacatatatattggatctttgatctttcttgg 1423703  T
Q  715 tccaagttttgcatattcaatgctttaagatttctaattattgtagtgctcatacagtgaagaaga 780  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  1423702 tccaagttttgcatattcaatgctttaagatttctaattattgcagtgctcatacactgaagaaga 1423637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 528 - 671
Target Start/End: Original strand, 1977210 - 1977353
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||| ||| || | |||||    
T  1977210 actcactcttttattggtttaaatcattgtggatctacactttgaaaattgaacccacacaaagtggttggacatacattgatttcatccaacagaagag 1977309  T
Q  628 tgtaaatact--agagagtgttgaaaagtgagtgttgctagtattc 671  Q
    ||  | | ||  |||||||||| |||||||||| ||||||| ||||    
T  1977310 tg--agtgctagagagagtgttaaaaagtgagtattgctagcattc 1977353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 508 - 664
Target Start/End: Original strand, 24055942 - 24056098
Alignment:
Q  508 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 607  Q
    |||| |||| ||||| ||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||   |||||||||| |||||||||||    
T  24055942 ttttgaacactttctctaacactcactctcttattggtttaaataattgtgggtctacactttgaaaattgaacttacacaaagtggtgggacatacatt 24056041  T
Q  608 gattttatctaataaaagagtgtaaatact--agagagtgttgaaaagtgagtgttgct 664  Q
     |||| |||| ||||||||| |  | | ||  |||||| ||||||||||||||||||||    
T  24056042 aatttcatctgataaaagagcg--agtgctaaagagagcgttgaaaagtgagtgttgct 24056098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 532 - 665
Target Start/End: Complemental strand, 8903991 - 8903858
Alignment:
Q  532 actctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgta 631  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||    |||||||||| |||||||||||||||| ||| ||||||  ||||      
T  8903991 actctcttattggtttaaatcattgtgggtctacactttgaaaattgaaccgacacaaagtggtgggacatacattgatttcatcaaataaacaagtg-- 8903894  T
Q  632 aatact--agagagtgttgaaaagtgagtgttgcta 665  Q
    | ||||  ||||||||||||||| ||||||||||||    
T  8903893 agtactagagagagtgttgaaaaatgagtgttgcta 8903858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 528 - 671
Target Start/End: Complemental strand, 16983537 - 16983394
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| |  |||||||| | ||||||| | |||||||||| ||||||  ||    
T  16983537 actcactctcttattggtttaaatcattgtgagtctacactttgaaaattgaacccccacaaagtgatgggacataaaatgattttatccaataaatcag 16983438  T
Q  628 tgtaaatactag--agagtgttgaaaagtgagtgttgctagtattc 671  Q
    ||  | | ||||  ||||||||||||||||||||||||||| ||||    
T  16983437 tg--agtgctagatagagtgttgaaaagtgagtgttgctagcattc 16983394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 531 - 629
Target Start/End: Complemental strand, 8914911 - 8914813
Alignment:
Q  531 cactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||| |  |||||||||| |||||||||||| ||||||| ||| ||||||||    
T  8914911 cactctcttattggtttaaatcattgtgggtctacactttgaaaaatgaacccacacaaagtggtgggacatacattggttttatccaatgaaagagtg 8914813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 528 - 626
Target Start/End: Original strand, 17499270 - 17499368
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 626  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||| |||| ||||||| |||||||| ||| |||||||||    
T  17499270 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaaccaacacaaaatggtgggacatatattgatttcatccaataaaaga 17499368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 535 - 629
Target Start/End: Complemental strand, 35797531 - 35797437
Alignment:
Q  535 ctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    ||||||||| ||||||||||||||||| |||||||| ||||||||||||  |||||||||| | |||||||||||||||||| ||||||||||||    
T  35797531 ctcttattgatttaaatcattgtggatttacactttaaaaattgaactcgcacaaagtggtggaacatacattgattttatccaataaaagagtg 35797437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 528 - 671
Target Start/End: Original strand, 28413906 - 28414049
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||| ||| |||||||||||||||||| ||| |||| ||||||||||||||||||  |||||||||| |||||||||||||||| ||| ||||||| ||    
T  28413906 actcattcttttattggtttaaatcattatgggtctatactttgaaaattgaactcacacaaagtggtgggacatacattgatttcatcgaataaaaaag 28414005  T
Q  628 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 671  Q
    ||        ||||||||||||||||||||||||| ||| ||||    
T  28414006 tgagcgctagagagagtgttgaaaagtgagtgttgttagcattc 28414049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 536 - 624
Target Start/End: Original strand, 9952802 - 9952890
Alignment:
Q  536 tcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaa 624  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||  |||||||||| |||||| ||||||||| ||| |||||||    
T  9952802 tcttattggtttaaatcattgtgggtttacactttgaaaattgaactcacacaaagtggtgggacatgcattgatttcatccaataaaa 9952890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 534 - 666
Target Start/End: Complemental strand, 32072234 - 32072102
Alignment:
Q  534 tctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaa 633  Q
    |||||||||| ||||||| ||||||| |||||||||| |||||||||| |  |||||||||| ||||||||||| |||| ||| ||||||||||||  |     
T  32072234 tctcttattgatttaaataattgtgggtctacactttaaaaattgaacccacacaaagtggtgggacatacattcatttcatccaataaaagagtg--ag 32072137  T
Q  634 tact--agagagtgttgaaaagtgagtgttgctag 666  Q
    | ||  ||||||||||||||||||| |||||||||    
T  32072136 tgctagagagagtgttgaaaagtgaatgttgctag 32072102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 528 - 671
Target Start/End: Original strand, 34861229 - 34861365
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    |||||||||||||||||||||||| |||||||      ||||||||||||||||    |||||||||| |||||||||||||||| ||| ||||||||||    
T  34861229 actcactctcttattggtttaaattattgtggg-----actttgaaaattgaacctacacaaagtggtgggacatacattgatttcatccaataaaagag 34861323  T
Q  628 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 671  Q
    ||  | | |||||||||||||||||||||| | |||||| ||||    
T  34861324 tg--agtgctagagagtgttgaaaagtgagaggtgctagcattc 34861365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 528 - 671
Target Start/End: Complemental strand, 43506678 - 43506538
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||||||||||||||| |||||||||||||| ||||||| |||||| | |||| |  |||||||||| | ||||||||||||| |||| ||||||| ||    
T  43506678 actcactctcttattggcttaaatcattgtgggtctacacattgaaagtagaacccacacaaagtggtggaacatacattgattatatccaataaaa-ag 43506580  T
Q  628 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 671  Q
    ||  | |  ||||||||||| |||||||||||||||||| ||||    
T  43506579 tg--agtgttagagagtgttcaaaagtgagtgttgctagcattc 43506538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 508 - 581
Target Start/End: Original strand, 6098794 - 6098867
Alignment:
Q  508 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaac 581  Q
    ||||||||||| ||| ||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  6098794 ttttaaacattctctctaatactcactctcttattgatttaaattattgtggatctacactttgaaaattgaac 6098867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 530 - 671
Target Start/End: Original strand, 35151768 - 35151909
Alignment:
Q  530 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    ||||| ||||||| |||| ||| ||||||| |||||||||| |||||||||  |  ||||| |||| |||||||||||||||| ||| |||||||||||     
T  35151768 tcactttcttattagtttgaattattgtgggtctacactttaaaaattgaatccccacaaaatggtgggacatacattgatttcatccaataaaagagt- 35151866  T
Q  630 taaatactaga--gagtgttgaaaagtgagtgttgctagtattc 671  Q
     |||| ||| |  ||||||| |||||||||||||||||||||||    
T  35151867 -aaatgctaaaaagagtgttaaaaagtgagtgttgctagtattc 35151909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 528 - 671
Target Start/End: Complemental strand, 5980022 - 5979880
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||||||||||||||||| ||| |||||||  |  |||||||||||||||||| |  |||||||||| |||||||||||||| | ||| |||| |||||    
T  5980022 actcactctcttattggtt-aaaccattgtgagttcacactttgaaaattgaacccacacaaagtggtgggacatacattgatctcatccaatagaagag 5979924  T
Q  628 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 671  Q
    |||  |    ||||||||||||||||| ||||||||||| ||||    
T  5979923 tgtctactagagagagtgttgaaaagtaagtgttgctagcattc 5979880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 538 - 623
Target Start/End: Original strand, 17741574 - 17741659
Alignment:
Q  538 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaa 623  Q
    ||||||||||||| |||| | | |||||||||||||||||||||||| ||||| |||| |||||||||||||||| ||| ||||||    
T  17741574 ttattggtttaaaccattataggtctacactttgaaaattgaactctcacaaaatggtgggacatacattgatttcatccaataaa 17741659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 199 - 310
Target Start/End: Complemental strand, 10712088 - 10711976
Alignment:
Q  199 tagggtttatgcggaaacaagaccccccaagatcaggagctctgatgccacgtgaaaactaaacattatatttcagagataaaa-aatgcacaactacta 297  Q
    ||||||||||||||||||||||| |||||||||   ||| |||||||||| ||||||||| || ||||||| |||||||||||| |||| | | | ||||    
T  10712088 tagggtttatgcggaaacaagactccccaagattgagagttctgatgccatgtgaaaactgaatattatatgtcagagataaaataatgtatatccacta 10711989  T
Q  298 atgtgtttatata 310  Q
    |||| ||||||||    
T  10711988 atgtatttatata 10711976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 537 - 629
Target Start/End: Complemental strand, 23685265 - 23685173
Alignment:
Q  537 cttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    |||||||||||||||||||| | |||||||||||| |||| ||||||  | |||||||| |||||||||||||||| ||| ||||||| ||||    
T  23685265 cttattggtttaaatcattgcgaatctacactttggaaatagaactcgcataaagtggtgggacatacattgatttcatccaataaaatagtg 23685173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 533 - 629
Target Start/End: Complemental strand, 45246572 - 45246476
Alignment:
Q  533 ctctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    ||||||||||| ||||||||||||  ||||||||||||| |||| ||||||  | ||||||||  ||||||||||||||||||| ||||||| ||||    
T  45246572 ctctcttattgatttaaatcattgcagatctacactttggaaatagaactcgcataaagtggtgagacatacattgattttatccaataaaatagtg 45246476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 534 - 629
Target Start/End: Complemental strand, 31301251 - 31301157
Alignment:
Q  534 tctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    |||||||||||||||||| ||| || |||||||| |||||||| ||||||  |||||||||| | |||||||||||||| ||| ||||||||||||    
T  31301251 tctcttattggtttaaattattatg-atctacacattgaaaatagaactcacacaaagtggtggaacatacattgatttcatccaataaaagagtg 31301157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 538 - 666
Target Start/End: Original strand, 11962729 - 11962856
Alignment:
Q  538 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatact 637  Q
    |||||||||||||||||| |||||||||||||||||||||||||    | ||| |||| ||| |||| ||||||||||  ||||||||||||   ||       
T  11962729 ttattggtttaaatcatt-tggatctacactttgaaaattgaacctacataaaatggtgggatatactttgattttattcaataaaagagtgagtattaa 11962827  T
Q  638 agagagtgttgaaaagtgagtgttgctag 666  Q
    |||| |||||||||||||||||| |||||    
T  11962828 agagcgtgttgaaaagtgagtgtcgctag 11962856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 508 - 611
Target Start/End: Original strand, 36804856 - 36804959
Alignment:
Q  508 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 607  Q
    |||| |||||| ||| ||| ||| |||||||||||| ||||||| ||||||||| || | |||||||||||||| |  ||||| |||| |||||||||||    
T  36804856 ttttcaacattctctctaatacttactctcttattgatttaaattattgtggatgtatattttgaaaattgaacccacacaaaatggtgggacatacatt 36804955  T
Q  608 gatt 611  Q
    ||||    
T  36804956 gatt 36804959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 528 - 662
Target Start/End: Complemental strand, 41727573 - 41727439
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    |||||||||||| ||||||||||||||| ||  ||||||| || ||||  ||||    |||||| ||| ||||||||||||||||||||||| |||||||    
T  41727573 actcactctcttgttggtttaaatcattatgagtctacacattaaaaacagaacctacacaaagcggtgggacatacattgattttatctaacaaaagag 41727474  T
Q  628 tgtaaatact--agagagtgttgaaaagtgagtgttg 662  Q
    ||  | | ||  |||||||||| ||||||||||||||    
T  41727473 tg--attgctaaagagagtgttcaaaagtgagtgttg 41727439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 528 - 581
Target Start/End: Original strand, 7493379 - 7493432
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaac 581  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  7493379 actcactctcttattggtttaaatcattgtgagtctacactttgaaaatagaac 7493432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 538 - 629
Target Start/End: Complemental strand, 4675039 - 4674952
Alignment:
Q  538 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    |||||||||||||||||||||   |||||||||||||||| |||||  |||||||| | ||    |||||||||| ||||||||||||||||    
T  4675039 ttattggtttaaatcattgtgtgactacactttgaaaattaaactcacacaaagtgatagg----acattgatttcatctaataaaagagtg 4674952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 528 - 666
Target Start/End: Complemental strand, 6387705 - 6387568
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatc-tacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 626  Q
    ||||| ||||||||||| ||||| || ||||| || || |||||| |||| |||| |  | ||| |||| |||||||||||||||||||| |||||||||    
T  6387705 actcattctcttattgggttaaaacaatgtgggtcgtatactttggaaatggaacccacataaaatggtgggacatacattgattttatccaataaaaga 6387606  T
Q  627 gtgtaaatactagagagtgttgaaaagtgagtgttgctag 666  Q
    |||  | |  ||||||||||  ||||| ||||||||||||    
T  6387605 gtg--agtgttagagagtgtccaaaagagagtgttgctag 6387568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 528 - 603
Target Start/End: Complemental strand, 14236481 - 14236406
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacata 603  Q
    |||||||||||| ||||||||||| ||||||   ||||||||| |||||||||||   |||||||||| |||||||    
T  14236481 actcactctcttgttggtttaaattattgtgcgcctacactttcaaaattgaacttacacaaagtggtgggacata 14236406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 538 - 624
Target Start/End: Original strand, 4319780 - 4319866
Alignment:
Q  538 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaa 624  Q
    |||||| ||||||| | ||| | ||||||||||||||||| || ||  |||||||| |  ||||| |||||||||||||||||||||    
T  4319780 ttattgatttaaattagtgtaggtctacactttgaaaattaaattcacacaaagtgatgagacatgcattgattttatctaataaaa 4319866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 546 - 616
Target Start/End: Complemental strand, 9192126 - 9192056
Alignment:
Q  546 ttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatc 616  Q
    |||||||||||||  |||||| ||| |||||||||| |  |||||||||| ||| ||||||||||||||||    
T  9192126 ttaaatcattgtgagtctacaatttaaaaattgaacccacacaaagtggtgggatatacattgattttatc 9192056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 563 - 629
Target Start/End: Complemental strand, 35689588 - 35689522
Alignment:
Q  563 tacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    |||||||||||||| ||||||  | |||||||| |||||||||||||||| ||| ||||||| ||||    
T  35689588 tacactttgaaaatggaactcacataaagtggtgggacatacattgatttcatccaataaaaaagtg 35689522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 561 - 626
Target Start/End: Complemental strand, 1961392 - 1961327
Alignment:
Q  561 tctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 626  Q
    ||||||||||||||||||||| |   ||||||||| |||| ||| ||||||||||| |||||||||    
T  1961392 tctacactttgaaaattgaacccacgcaaagtggtgggacgtaccttgattttatccaataaaaga 1961327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 508 - 557
Target Start/End: Original strand, 5095777 - 5095826
Alignment:
Q  508 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgt 557  Q
    ||||||||||  ||| ||| ||||||||||||||||||||||||||||||    
T  5095777 ttttaaacatcctctctaatactcactctcttattggtttaaatcattgt 5095826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 528 - 624
Target Start/End: Original strand, 13407360 - 13407457
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatc-tacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaa 624  Q
    ||||| ||||| ||||| |||||||| ||||| || |||||||||||||| |||| |    ||| |||| |||||||||||||||||||| |||||||    
T  13407360 actcattctctcattgggttaaatcaatgtgggtcatacactttgaaaatagaacccacttaaaatggtgggacatacattgattttatccaataaaa 13407457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 610
Target Start/End: Complemental strand, 34952573 - 34952504
Alignment:
Q  541 ttggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgat 610  Q
    |||||||||||||||| || ||||||  |||||||||||| ||  ||||| |||| ||||||||||||||    
T  34952573 ttggtttaaatcattgcgggtctacatattgaaaattgaaatcccacaaaatggtgggacatacattgat 34952504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 666
Target Start/End: Complemental strand, 43026400 - 43026298
Alignment:
Q  562 ctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatactagagagtgttgaaaagtgagtgtt 661  Q
    |||||||||| |||| |||| |  | |||||||  |||||||||||||||||| ||||||||| ||||  | | |||||||||||| ||||| || ||||    
T  43026400 ctacactttggaaatggaacccacataaagtggcaggacatacattgattttacctaataaaaaagtg--agtgctagagagtgtttaaaagagaatgtt 43026303  T
Q  662 gctag 666  Q
    |||||    
T  43026302 gctag 43026298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 538 - 626
Target Start/End: Complemental strand, 9193515 - 9193427
Alignment:
Q  538 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 626  Q
    |||||||||| ||| ||||| | ||||||||||||||||||||||   ||||||| ||  |||||||| | |||| ||| |||||||||    
T  9193515 ttattggttttaattattgtaggtctacactttgaaaattgaacttacacaaagtagtgagacatacactaatttcatcaaataaaaga 9193427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 250 - 310
Target Start/End: Complemental strand, 44420699 - 44420639
Alignment:
Q  250 gtgaaaactaaacattatatttcagagataaaaaatgcacaactactaatgtgtttatata 310  Q
    ||||||||| || |||||||||||||||||||  ||  ||||| |||||||||||||||||    
T  44420699 gtgaaaactgaatattatatttcagagataaatgatatacaaccactaatgtgtttatata 44420639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 562 - 629
Target Start/End: Complemental strand, 1205936 - 1205869
Alignment:
Q  562 ctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    |||||||||| |||| |||| | || ||||||||  |||||||||| |||||| ||||||||||||||    
T  1205936 ctacactttggaaatagaacccatataaagtggtgagacatacattaattttacctaataaaagagtg 1205869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 528 - 614
Target Start/End: Complemental strand, 25915175 - 25915086
Alignment:
Q  528 actcactctcttattggtttaaatcattgtgga---tctacactttgaaaattgaactcttacaaagtggttggacatacattgatttta 614  Q
    ||||||||| ||||||| | |||||| ||||||   |||||||||||||||| |||| |  | ||||| || ||||||||||||||||||    
T  25915175 actcactcttttattgggtgaaatcaatgtggaacctctacactttgaaaatggaacccaaataaagtagtaggacatacattgatttta 25915086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 538 - 605
Target Start/End: Complemental strand, 35819265 - 35819198
Alignment:
Q  538 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacataca 605  Q
    ||||| |||||||||||||||| |||| |||||||||||||| | |  ||||| |||| |||||||||    
T  35819265 ttattagtttaaatcattgtgggtctatactttgaaaattgagcccacacaaaatggtgggacataca 35819198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 250 - 299
Target Start/End: Original strand, 16985659 - 16985708
Alignment:
Q  250 gtgaaaactaaacattatatttcagagataaaaaatgcacaactactaat 299  Q
    ||||||||| || ||||||||||||||||||| |||| ||||| ||||||    
T  16985659 gtgaaaactgaatattatatttcagagataaataatgtacaaccactaat 16985708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 2e-39; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 528 - 671
Target Start/End: Original strand, 41451932 - 41452075
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |  |||||||||| |||||||| ||||||| ||| ||||||||||    
T  41451932 actcactctcttattggtttaaatcattgtgggtctactctttgaaaattgaacccacacaaagtggtgggacatactttgatttcatccaataaaagag 41452031  T
Q  628 tgtaaatactagaga--gtgttgaaaagtgagtgttgctagtattc 671  Q
    ||  | |||||||||  |||||||||||||||||||||||||||||    
T  41452032 tg--agtactagagattgtgttgaaaagtgagtgttgctagtattc 41452075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 528 - 671
Target Start/End: Complemental strand, 24734848 - 24734705
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||||||||||||||||||||||||||||||  |||| ||||||||||||||| |  |||||||||| |||||||| ||||||| ||| ||||||||||    
T  24734848 actcactctcttattggtttaaatcattgtgggcctactctttgaaaattgaacccacacaaagtggtgggacatactttgatttcatccaataaaagag 24734749  T
Q  628 tgtaaatactagaga--gtgttgaaaagtgagtgttgctagtattc 671  Q
    ||  | |||||||||  |||||||||||||||||||||||||||||    
T  24734748 tg--agtactagagattgtgttgaaaagtgagtgttgctagtattc 24734705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 528 - 671
Target Start/End: Complemental strand, 28529394 - 28529253
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |  ||| |||||| |||||||||||||||| ||| ||||||||||    
T  28529394 actcactctcttattggtttaaatcattgtgggtctacactttgaaaattgaaccc--acacagtggtgggacatacattgatttcatccaataaaagag 28529297  T
Q  628 tgtaaatact--agagagtgttgaaaagtgagtgttgctagtattc 671  Q
    ||  | | ||  ||||||||||||||||||||||||||||| ||||    
T  28529296 tg--agtgctagagagagtgttgaaaagtgagtgttgctagcattc 28529253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 528 - 671
Target Start/End: Original strand, 20493482 - 20493625
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |  |||||||||| |||||||||||||||| ||| |||||| |||    
T  20493482 actcactctcttattggtttaaatcattgtgggtctacactttgaatattgaacccccacaaagtggtaggacatacattgatttcatccaataaatgag 20493581  T
Q  628 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 671  Q
    ||    |   ||||||||||||||||||||||||||||| ||||    
T  20493582 tgagtgttagagagagtgttgaaaagtgagtgttgctagcattc 20493625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 528 - 671
Target Start/End: Original strand, 37776740 - 37776883
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||||||||||| |||||||||||||||| | ||||||||||||||||||||| |  |||||||||| |||||||||||||||| ||||||||||||||    
T  37776740 actcactctcttagtggtttaaatcattgtaggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatctaataaaagag 37776839  T
Q  628 tgtaaatact--agagagtgttgaaaagtgagtgttgctagtattc 671  Q
    ||  | | ||  ||| ||||||||||||||||||||||||| ||||    
T  37776840 tg--agtgctggagaaagtgttgaaaagtgagtgttgctagcattc 37776883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 528 - 671
Target Start/End: Complemental strand, 46450209 - 46450067
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttac-aaagtggttggacatacattgattttatctaataaaaga 626  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||| |||| |  || |||||||| |||||||||||||||  |||||||||||||    
T  46450209 actcactctcttattggtttaaatcattgtgggtctacactttgcaaatagaacccacacaaaagtggtgggacatacattgattccatctaataaaaga 46450110  T
Q  627 gtgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 671  Q
    |||  | | |||||||||||| |||||||||||||||||| ||||    
T  46450109 gtg--agtgctagagagtgttcaaaagtgagtgttgctagcattc 46450067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 528 - 671
Target Start/End: Complemental strand, 46161090 - 46160949
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||| ||||    |||||||||| ||||||  |||||||| ||| ||||||||||    
T  46161090 actcactctcttattggtttaaatcattatggatctacactttggaaatagaaccaacacaaagtggtcggacatgtattgatttcatccaataaaagag 46160991  T
Q  628 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 671  Q
    ||  | | |||||||||||| |||||||||||||||||| ||||    
T  46160990 tg--agtgctagagagtgttcaaaagtgagtgttgctagcattc 46160949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 528 - 627
Target Start/End: Original strand, 29588770 - 29588869
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||  | ||||||   |||||||||||||||||||| ||||||||||    
T  29588770 actcactctcttattgatttaaatcattgtgggtctacactttgaaaattgaactcacataaagtgaaaggacatacattgattttatccaataaaagag 29588869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 528 - 629
Target Start/End: Original strand, 18427187 - 18427288
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||| |  ||||| |||| |||||||||||||||| ||| |||||| |||    
T  18427187 actcactctcttattggtttaaatcattgtgggtctacactttgaaaatagaacccacacaaaatggtgggacatacattgatttcatccaataaatgag 18427286  T
Q  628 tg 629  Q
    ||    
T  18427287 tg 18427288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 508 - 671
Target Start/End: Complemental strand, 48351599 - 48351436
Alignment:
Q  508 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 607  Q
    |||| |||||||||| ||| ||||  |||||||||| ||||||||||| ||||| ||||||||||||||||||| |  ||||||| ||  |||||| |||    
T  48351599 ttttgaacattttctctaatactctttctcttattgatttaaatcattatggatatacactttgaaaattgaacccacacaaagtagtgagacatatatt 48351500  T
Q  608 gattttatctaataaaagagtgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 671  Q
    ||||||||| |||||||||||||   |   |||||||||| |||| ||||||||| ||| ||||    
T  48351499 gattttatccaataaaagagtgtgtcttaaagagagtgttaaaaactgagtgttgttagcattc 48351436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 515 - 629
Target Start/End: Complemental strand, 38414803 - 38414689
Alignment:
Q  515 cattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgatttta 614  Q
    |||| ||||||| |||||||||||||||||||||||| || ||||||||||||||| |||||| ||| |  ||||| |||| |||||||||||||| |||    
T  38414803 cattctctttaacactcactctcttattggtttaaattatcgtggatctacactttaaaaattaaacccacacaaaatggtgggacatacattgatctta 38414704  T
Q  615 tctaataaaagagtg 629  Q
    |||||| | ||||||    
T  38414703 tctaatgagagagtg 38414689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 528 - 629
Target Start/End: Complemental strand, 20791439 - 20791338
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||||| ||||||||||||||||||||| |||||||||||||| |||| ||||||  | |||||||| |||||||||||||||| ||| ||||||| ||    
T  20791439 actcactttcttattggtttaaatcattgcggatctacactttggaaatagaactcgcataaagtggtgggacatacattgatttcatccaataaaatag 20791340  T
Q  628 tg 629  Q
    ||    
T  20791339 tg 20791338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 508 - 611
Target Start/End: Original strand, 2419481 - 2419584
Alignment:
Q  508 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 607  Q
    |||| |||| ||||||||| ||||||| |||||||||||||||||||||||| ||||||| ||| |||| |||||| | ||||||||| |||||| ||||    
T  2419481 ttttgaacactttctttaatactcactttcttattggtttaaatcattgtgggtctacacattggaaatagaactcatgcaaagtggtaggacatgcatt 2419580  T
Q  608 gatt 611  Q
    ||||    
T  2419581 gatt 2419584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 520 - 662
Target Start/End: Original strand, 8825008 - 8825150
Alignment:
Q  520 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaa 619  Q
    ||||||| |||||||||||||||||||||||| ||||||  | || |||||||||||||||| |  | ||| |||| ||||||| |||||||| ||||||    
T  8825008 tctttaatactcactctcttattggtttaaattattgtgagtgtagactttgaaaattgaacccgcataaaatggtgggacatatattgatttcatctaa 8825107  T
Q  620 taaaagagtgtaaatactagagag--tgttgaaaagtgagtgttg 662  Q
    |||||| |||  | ||||||||||   ||||||||||||||||||    
T  8825108 taaaagggtg--agtactagagagatggttgaaaagtgagtgttg 8825150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 528 - 671
Target Start/End: Original strand, 5452099 - 5452240
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    |||| ||||||||||| |||||||| ||| |  ||||||||| ||||||||||  |  |||||||||| ||| |||||||||||| ||| ||||||||||    
T  5452099 actcgctctcttattgatttaaatccttggg--tctacacttagaaaattgaatccacacaaagtggtgggaaatacattgatttcatccaataaaagag 5452196  T
Q  628 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 671  Q
    || |  |   ||||||||||||||||||||||||||||| ||||    
T  5452197 tgaatgttaaagagagtgttgaaaagtgagtgttgctagcattc 5452240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 529 - 629
Target Start/End: Complemental strand, 22604702 - 22604602
Alignment:
Q  529 ctcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagt 628  Q
    |||||||||||||  |||||||||||||||  |||||| ||||||||||||||||  ||||| |||| ||||||||||| |||||||| |||||| ||||    
T  22604702 ctcactctcttataagtttaaatcattgtgagtctacattttgaaaattgaactcccacaaaatggtgggacatacattaattttatccaataaatgagt 22604603  T
Q  629 g 629  Q
    |    
T  22604602 g 22604602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 528 - 665
Target Start/End: Original strand, 55452052 - 55452187
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||||||| | |||||||||||||||| ||  ||||||||||| |||| |||| |  |||||||||| ||||||||||  |||  ||| ||||||||||    
T  55452052 actcactctttcattggtttaaatcattatgagtctacactttggaaatagaacccacacaaagtggtgggacatacatgtattccatccaataaaagag 55452151  T
Q  628 tgtaaatactagagagtgttgaaaagtgagtgttgcta 665  Q
    ||  | ||| |||||||||| |||||||||||||||||    
T  55452152 tg--agtaccagagagtgttcaaaagtgagtgttgcta 55452187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 538 - 623
Target Start/End: Original strand, 19345047 - 19345132
Alignment:
Q  538 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaa 623  Q
    |||||||||||||||||||||  |||||| |||||||||||||| |  |||||||||| |||||||||||||||| ||| ||||||    
T  19345047 ttattggtttaaatcattgtgagtctacaatttgaaaattgaaccccaacaaagtggtgggacatacattgatttcatccaataaa 19345132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 528 - 664
Target Start/End: Original strand, 50156697 - 50156831
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||| |   |||||| || | ||||||||| |||| ||  ||||||  |     
T  50156697 actcactctcttattggtttaaatcattgtgggtctacacttttaaaattgaacccccgcaaagttgtggaacatacattaatttcattcaataaataa- 50156795  T
Q  628 tgtaaatactagagagtgttgaaaagtgagtgttgct 664  Q
     |||| ||  |||| ||||||||||||||||||||||    
T  50156796 -gtaagtatcagagtgtgttgaaaagtgagtgttgct 50156831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 535 - 671
Target Start/End: Complemental strand, 29755636 - 29755500
Alignment:
Q  535 ctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaat 634  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |  ||||||| ||   ||||| ||||||| |||   |||||||||||    |    
T  29755636 ctcttattggtttaaatcattgttgatctacactttgaaaattgaacccacacaaagtagtgaaacatatattgattctattcgataaaagagtgggtgt 29755537  T
Q  635 actagagagtgttgaaaagtgagtgttgctagtattc 671  Q
       ||||| ||||||||||||||||||||||| ||||    
T  29755536 taaagagaatgttgaaaagtgagtgttgctagcattc 29755500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 528 - 612
Target Start/End: Original strand, 52123993 - 52124077
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattt 612  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |  ||||| | || ||||||||||| ||||    
T  52123993 actcactttcttattggtttaaatcattgtgggtctacactttgaaaattgaacccccacaaaatagtgggacatacattaattt 52124077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 528 - 629
Target Start/End: Complemental strand, 14236162 - 14236061
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||||| | |||||||| ||||| ||||||||||||||||||| |||| ||||||  | |||||||| ||||||| |||||||| ||| ||||||| ||    
T  14236162 actcacttttttattggtctaaattattgtggatctacactttggaaatagaactcgcataaagtggtgggacatatattgatttcatccaataaaatag 14236063  T
Q  628 tg 629  Q
    ||    
T  14236062 tg 14236061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 237 - 310
Target Start/End: Complemental strand, 50056966 - 50056893
Alignment:
Q  237 gctctgatgccacgtgaaaactaaacattatatttcagagataaaaaatgcacaactactaatgtgtttatata 310  Q
    |||||||| ||| ||||||||| || ||||||||||||||||||| |||| ||||| |||||||||||||||||    
T  50056966 gctctgataccatgtgaaaactgaatattatatttcagagataaataatgtacaaccactaatgtgtttatata 50056893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 540 - 628
Target Start/End: Original strand, 26310495 - 26310583
Alignment:
Q  540 attggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagt 628  Q
    |||||||||||||||| ||| |||||||||||||||||||||    | ||| |||| |||||||||||||||| ||| |||||||||||    
T  26310495 attggtttaaatcattatgggtctacactttgaaaattgaaccaacaaaaaatggtgggacatacattgatttcatccaataaaagagt 26310583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 520 - 607
Target Start/End: Original strand, 10948589 - 10948676
Alignment:
Q  520 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 607  Q
    ||||||| ||||||||| |||||||||||||||||||||| | |||||||| ||||||||||    |||||||||| | |||||||||    
T  10948589 tctttaatactcactcttttattggtttaaatcattgtgggtttacactttaaaaattgaacaaacacaaagtggtggaacatacatt 10948676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 528 - 666
Target Start/End: Complemental strand, 27243189 - 27243050
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatc-tacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 626  Q
    ||||||||||| ||||| |||||||| ||||| || ||||||||| |||| |||| |  | |||||||| |||||| ||||||||||||| |||||||||    
T  27243189 actcactctctcattgggttaaatcaatgtgggtcatacactttggaaatggaacccacataaagtggtgggacatgcattgattttatccaataaaaga 27243090  T
Q  627 gtgtaaatactagagagtgttgaaaagtgagtgttgctag 666  Q
    |||    |   |||||||||| ||||| ||||||||||||    
T  27243089 gtgagtgttagagagagtgttcaaaagagagtgttgctag 27243050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 528 - 590
Target Start/End: Original strand, 24429062 - 24429124
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaa 590  Q
    ||||||| | ||||||||||||||||||||||||||||||||| |||||||||| || |||||    
T  24429062 actcactattttattggtttaaatcattgtggatctacactttaaaaattgaaccctcacaaa 24429124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 222 - 310
Target Start/End: Original strand, 28095952 - 28096039
Alignment:
Q  222 cccccaagatcaggagctctgatgccacgtgaaaactaaacattatatttcagagataaaa-aatgcacaactactaatgtgtttatata 310  Q
    ||||||||||| |||||||  |||||| |||||||| ||| |||||||||||||||||||| |||  ||||| |||||||||||||||||    
T  28095952 cccccaagatcgggagctc--atgccatgtgaaaacaaaatattatatttcagagataaaataatttacaaccactaatgtgtttatata 28096039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 563 - 673
Target Start/End: Complemental strand, 30624739 - 30624631
Alignment:
Q  563 tacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatactagagagtgttgaaaagtgagtgttg 662  Q
    |||| ||||||||||||||||  ||||||||||   ||||||||| |||||||  ||||||||||||  | |  ||||||||| | ||||||||||||||    
T  30624739 tacattttgaaaattgaactcacacaaagtggtgaaacatacattaattttattcaataaaagagtg--agtgttagagagtgctcaaaagtgagtgttg 30624642  T
Q  663 ctagtattcat 673  Q
    |||| ||||||    
T  30624641 ctagcattcat 30624631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 522 - 573
Target Start/End: Original strand, 38138613 - 38138664
Alignment:
Q  522 tttaaaactcactctcttattggtttaaatcattgtggatctacactttgaa 573  Q
    ||||| ||| ||||||||||||||||||||||||||||||||| ||||||||    
T  38138613 tttaatacttactctcttattggtttaaatcattgtggatctatactttgaa 38138664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 528 - 666
Target Start/End: Complemental strand, 41387704 - 41387568
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||| ||||||||| | |||||||||||||| ||| ||||||||||||| ||| |  ||||| | ||  || |||||| ||||| ||| |||||| |||    
T  41387704 actcaatctcttatttgattaaatcattgtgggtctgcactttgaaaattaaacccacacaaaatagtgtgatatacatcgatttaatccaataaatgag 41387605  T
Q  628 tgtaaatactagagagtgttgaaaagtgagtgttgctag 666  Q
    ||  | | ||||||||||||||| | |||||||||||||    
T  41387604 tg--agtgctagagagtgttgaataatgagtgttgctag 41387568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 538 - 612
Target Start/End: Complemental strand, 49072138 - 49072064
Alignment:
Q  538 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattt 612  Q
    |||||||||||||| ||||||| ||||||||||||||||  ||||| |||||||||||  |||||| ||| ||||    
T  49072138 ttattggtttaaattattgtgggtctacactttgaaaatataactcatacaaagtggtgagacataaattaattt 49072064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 520 - 658
Target Start/End: Complemental strand, 138914 - 138778
Alignment:
Q  520 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaa 619  Q
    ||||||| ||| ||||| |||||| |||||||||||||   | |||| ||| |||||||||  | |||||| ||||  ||||||||||||||| ||  ||    
T  138914 tctttaatacttactcttttattgatttaaatcattgtaagtttacattttaaaaattgaatacatacaaaatggtgagacatacattgatttcattcaa 138815  T
Q  620 taaaagagtgtaaatactagagagtgttgaaaagtgagt 658  Q
    ||||||||||  | | ||||||||| ||||||| |||||    
T  138814 taaaagagtg--agtgctagagagtcttgaaaactgagt 138778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 554 - 629
Target Start/End: Original strand, 7419241 - 7419316
Alignment:
Q  554 ttgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    |||||||||||||||||| |||| ||||||  ||||| | |  ||||||| ||| |||||||||||||||||||||    
T  7419241 ttgtggatctacactttggaaatagaactcacacaaaatagagggacatatatttattttatctaataaaagagtg 7419316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 528 - 623
Target Start/End: Original strand, 15790407 - 15790501
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaa 623  Q
    |||||||||||||||||||||||||||| |||  |||||||||||||||||  |    | ||| ||||  ||||||||||||||||||| ||||||    
T  15790407 actcactctcttattggtttaaatcattatgg-cctacactttgaaaattgtcccaccataaaatggtgagacatacattgattttatccaataaa 15790501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 539 - 582
Target Start/End: Original strand, 22856282 - 22856325
Alignment:
Q  539 tattggtttaaatcattgtggatctacactttgaaaattgaact 582  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||    
T  22856282 tattggtttaaataattgtggatctacactttgaaaattaaact 22856325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 528 - 626
Target Start/End: Complemental strand, 44844125 - 44844026
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatc-tacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 626  Q
    ||||||| | ||||||| |||||||||||||| || |||||||| ||||||||||||  |  || |||| ||||||||||| |||||||  |||||||||    
T  44844125 actcacttttttattggattaaatcattgtgggtcatacactttaaaaattgaactcacatgaaatggtgggacatacatttattttattcaataaaaga 44844026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 538 - 628
Target Start/End: Original strand, 50661568 - 50661659
Alignment:
Q  538 ttattggtttaaatcattgtggatc-tacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagt 628  Q
    ||||||| |||||||| ||||| || |||| |||| |||| |||| |  | |||||||| |||||| |||||||||||||||||||||||||    
T  50661568 ttattgggttaaatcaatgtgggtcatacattttggaaatggaacccacataaagtggtgggacatgcattgattttatctaataaaagagt 50661659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 528 - 602
Target Start/End: Complemental strand, 752535 - 752461
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacat 602  Q
    ||||| ||||||||| |||||||||||||||| ||||||||||  |||| |||| |  |||||||||| ||||||    
T  752535 actcattctcttattagtttaaatcattgtgggtctacactttagaaatagaacccacacaaagtggtgggacat 752461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 531 - 581
Target Start/End: Original strand, 29388634 - 29388684
Alignment:
Q  531 cactctcttattggtttaaatcattgtggatctacactttgaaaattgaac 581  Q
    |||||||||||||  |||||||||||||  |||||||||||||||||||||    
T  29388634 cactctcttattgacttaaatcattgtgagtctacactttgaaaattgaac 29388684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 533 - 607
Target Start/End: Complemental strand, 39186102 - 39186028
Alignment:
Q  533 ctctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 607  Q
    ||||||||||| ||||||||||||  ||||||||||||| |||| ||||||  | ||||||||  ||||||||||    
T  39186102 ctctcttattgatttaaatcattgcagatctacactttggaaatagaactcgcataaagtggtgagacatacatt 39186028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 528 - 582
Target Start/End: Complemental strand, 43016556 - 43016502
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaact 582  Q
    |||||||||||||||| ||||||||||| || ||||| ||||| |||||||||||    
T  43016556 actcactctcttattgatttaaatcattatgaatctatactttaaaaattgaact 43016502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 244
Target Start/End: Complemental strand, 50057325 - 50057279
Alignment:
Q  198 ctagggtttatgcggaaacaagaccccccaagatcaggagctctgat 244  Q
    ||||||||||||||||| ||| ||||||||||||| |||||||||||    
T  50057325 ctagggtttatgcggaagcaacaccccccaagatcgggagctctgat 50057279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 534 - 666
Target Start/End: Complemental strand, 13809219 - 13809087
Alignment:
Q  534 tctcttattggtttaaatcattgtggatc-tacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaa 632  Q
    ||||||||||| ||||| || ||||| || || |||||| |||| |||| |  | ||| |||| |||||||||||||||||||| |||||||||||| ||    
T  13809219 tctcttattgggttaaaacaatgtgggtcatatactttggaaatggaacccacataaaatggtgggacatacattgattttatccaataaaagagtg-aa 13809121  T
Q  633 atactagagagtgttgaaaagtgagtgttgctag 666  Q
     |   |||||||||  ||||| ||||||||||||    
T  13809120 gttagagagagtgtgtaaaagagagtgttgctag 13809087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 542 - 660
Target Start/End: Original strand, 40702173 - 40702289
Alignment:
Q  542 tggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatactagag 641  Q
    |||||||||| | |||||||| | ||||| |||||||||| |  | |||||| | |  |||||||| |||| |||  ||||||||||  || | ||||||    
T  40702173 tggtttaaattactgtggatcaaaactttaaaaattgaacccacataaagtgatggatcatacattaatttcatcatataaaagagt--aagtgctagag 40702270  T
Q  642 agtgttgaaaagtgagtgt 660  Q
    |||||||||||||||||||    
T  40702271 agtgttgaaaagtgagtgt 40702289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 542 - 629
Target Start/End: Original strand, 41707490 - 41707577
Alignment:
Q  542 tggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    |||||||||| ||||||| |||| ||||| |||||||||| |  |||||||| |   |||||||||||||||||| ||| | ||||||    
T  41707490 tggtttaaattattgtgggtctatactttaaaaattgaacccacacaaagtgatgaaacatacattgattttatccaatgagagagtg 41707577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 562 - 629
Target Start/End: Original strand, 43657067 - 43657134
Alignment:
Q  562 ctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    |||||||||| |||| ||||||  | |||||||| |||||||||||||||| ||| ||||||| ||||    
T  43657067 ctacactttggaaatggaactcacataaagtggtgggacatacattgatttcatcaaataaaatagtg 43657134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 50057488 - 50057409
Alignment:
Q  165 cgaaaaaagcaaaagtaattgcaaggactgcaactagggtttatgcggaaacaagaccccccaagatcaggagctctgat 244  Q
    ||||||||| ||||||||  |||| ||| ||  |||||||||||| |||| |||  |||||||||||| |||||||||||    
T  50057488 cgaaaaaagaaaaagtaaccgcaaagacggcggctagggtttatgtggaagcaacgccccccaagatcgggagctctgat 50057409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 310
Target Start/End: Complemental strand, 50061429 - 50061382
Alignment:
Q  263 attatatttcagagataaaaaatgcacaactactaatgtgtttatata 310  Q
    ||||||||||||||||||| |||| | ||| |||||||||||||||||    
T  50061429 attatatttcagagataaataatgtagaacgactaatgtgtttatata 50061382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 528 - 570
Target Start/End: Complemental strand, 742099 - 742057
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacacttt 570  Q
    ||||| ||||||||| |||||||||||||||| ||||||||||    
T  742099 actcattctcttattagtttaaatcattgtgggtctacacttt 742057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 508 - 665
Target Start/End: Original strand, 40715879 - 40716036
Alignment:
Q  508 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 607  Q
    |||||||||| || ||||| | ||| |||| |||| ||||||||||||||   || ||| ||| |||||||||| |  |||||||| |  | ||||||||    
T  40715879 ttttaaacatattttttaatattcaatctcctattagtttaaatcattgtatgtcaacattttaaaaattgaacccacacaaagtgatgagtcatacatt 40715978  T
Q  608 gattttatctaataaaagagtgtaaatact--agagagtgttgaaaagtgagtgttgcta 665  Q
     |||| | |  |||||||||||  | | ||  ||||||||||||||||||||||||||||    
T  40715979 aatttcaccatataaaagagtg--agtgctagagagagtgttgaaaagtgagtgttgcta 40716036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 538 - 583
Target Start/End: Complemental strand, 41607544 - 41607499
Alignment:
Q  538 ttattggtttaaatcattgtggatctacactttgaaaattgaactc 583  Q
    |||||| ||||||| | ||||||||||||||||||||||| |||||    
T  41607544 ttattgatttaaataactgtggatctacactttgaaaattaaactc 41607499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 544 - 629
Target Start/End: Complemental strand, 42340958 - 42340873
Alignment:
Q  544 gtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    |||||||||||||||| ||| ||||||||||||| | |   |||||||||||  ||||| |||| || |  |||||||||||||||    
T  42340958 gtttaaatcattgtgggtctgcactttgaaaattaagccaatacaaagtggtgagacatgcatttatatcttctaataaaagagtg 42340873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 588 - 629
Target Start/End: Original strand, 46237143 - 46237184
Alignment:
Q  588 aaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    |||||||| |||||||||||||||| ||| ||||||||||||    
T  46237143 aaagtggtgggacatacattgatttcatccaataaaagagtg 46237184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 2e-36; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 528 - 666
Target Start/End: Complemental strand, 34905479 - 34905341
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |  |||||||||| |||||||||||||||| ||| ||||||||||    
T  34905479 actcactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccaaacaaagtggtgggacatacattgatttcatccaataaaagag 34905380  T
Q  628 tgtaaatactagagagtgttgaaaagtgagtgttgctag 666  Q
    ||    |   ||||||||||||||| |||||||||||||    
T  34905379 tgagtgttagagagagtgttgaaaaatgagtgttgctag 34905341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 531 - 623
Target Start/End: Original strand, 16852013 - 16852105
Alignment:
Q  531 cactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaa 623  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||| ||||||||||| |||| ||||||||||    
T  16852013 cactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccctacaaagtggtgggacatacatttatttcatctaataaa 16852105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 521 - 661
Target Start/End: Original strand, 10133188 - 10133328
Alignment:
Q  521 ctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaat 620  Q
    |||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |  | |||||||| ||||||||| | |||| ||| |||    
T  10133188 ctttaatactcactcttttattggtttaaatcattgtggttctacactttgaaaattgaacccccataaagtggtgggacatacaataatttcatccaat 10133287  T
Q  621 aaaagagtgtaaatactagagagtgttgaaaagtgagtgtt 661  Q
    ||| |||||    |   ||||||||||||||||||||||||    
T  10133288 aaatgagtgagtgttagagagagtgttgaaaagtgagtgtt 10133328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 528 - 671
Target Start/End: Complemental strand, 445961 - 445818
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||| |||||||||||||||||||||||||  |||| |||||||||||||||| |  ||||||||||  ||||||||||||||| ||| ||||||| ||    
T  445961 actcattctcttattggtttaaatcattgtgactctagactttgaaaattgaacccacacaaagtggtgtgacatacattgatttcatccaataaaaaag 445862  T
Q  628 tgtaaatactagag--agtgttgaaaagtgagtgttgctagtattc 671  Q
    ||  | | ||||||  ||||||||||| ||||| ||||||| ||||    
T  445861 tg--agtgctagagatagtgttgaaaaatgagtattgctagcattc 445818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 530 - 629
Target Start/End: Complemental strand, 5106439 - 5106340
Alignment:
Q  530 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    ||||||| ||||||||||||||| |||||| | ||||||||||||||||| | |  |||||||||| |||||||||||||||||||| ||||||| ||||    
T  5106439 tcactctattattggtttaaatccttgtgggtgtacactttgaaaattgatcccacacaaagtggtgggacatacattgattttatccaataaaaaagtg 5106340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 528 - 663
Target Start/End: Original strand, 31116161 - 31116296
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    |||||||||||||||||||||||||||||||| | ||||| ||| |||| |||| |  ||||||| || |||||||||||||||| ||| |||| |||||    
T  31116161 actcactctcttattggtttaaatcattgtgggtttacacattggaaatagaacacacacaaagtagtgggacatacattgatttcatccaatagaagag 31116260  T
Q  628 tgtaaatactagagagtgttgaaaagtgagtgttgc 663  Q
    || |  |   |||||||||| |||||||||||||||    
T  31116261 tgaatgttagagagagtgttcaaaagtgagtgttgc 31116296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 528 - 629
Target Start/End: Complemental strand, 21987435 - 21987334
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||||| ||||||||||||||||||||| |||||||||||||| |||| ||||||  | |||||||| ||| |||||||||||| ||| ||||||| ||    
T  21987435 actcactttcttattggtttaaatcattgcggatctacactttggaaatagaactcgcataaagtggtgggatatacattgatttcatccaataaaatag 21987336  T
Q  628 tg 629  Q
    ||    
T  21987335 tg 21987334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 528 - 661
Target Start/End: Complemental strand, 1392770 - 1392640
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||||||||||||||||||||||||||||||  ||||| ||| |||||||||| | |||||||| ||  ||||||||||||||| ||| ||||||| |     
T  1392770 actcactctcttattggtttaaatcattgtgg-gctacattttaaaaattgaacacatacaaagtagtgagacatacattgatttcatccaataaaaaat 1392672  T
Q  628 tgtaaatactagagagtgttgaaaagtgagtgtt 661  Q
     |  | | |||||||||||| |||||||||||||    
T  1392671 ag--agtgctagagagtgttaaaaagtgagtgtt 1392640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 538 - 623
Target Start/End: Complemental strand, 32122928 - 32122843
Alignment:
Q  538 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaa 623  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||  ||||| |||| ||||||| |||||||| ||| ||||||    
T  32122928 ttattggcttaaatcattgtgggtctacactttgaaaattgaactcccacaaaatggtgggacatatattgatttcatccaataaa 32122843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 508 - 629
Target Start/End: Original strand, 32598965 - 32599086
Alignment:
Q  508 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 607  Q
    ||||||||||| ||||||| ||||||||| |||||| |||||||||||||| |||||||||||| |||| | || |  |||||||||  ||||||||||     
T  32598965 ttttaaacattctctttaatactcactcttttattgatttaaatcattgtgaatctacactttggaaatagcacccacacaaagtggcgggacatacatg 32599064  T
Q  608 gattttatctaataaaagagtg 629  Q
     |||  ||| ||||||||||||    
T  32599065 tattccatccaataaaagagtg 32599086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 508 - 624
Target Start/End: Original strand, 32112734 - 32112850
Alignment:
Q  508 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 607  Q
    |||| |||||| ||| ||| | |||||||||||||| ||||||||||||||||||||||||||||||||  ||| |  ||||| ||||  ||||| ||||    
T  32112734 ttttgaacattctctctaatattcactctcttattgttttaaatcattgtggatctacactttgaaaataaaacccacacaaaatggtgtgacatgcatt 32112833  T
Q  608 gattttatctaataaaa 624  Q
    ||||| ||| |||||||    
T  32112834 gatttcatccaataaaa 32112850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 537 - 624
Target Start/End: Original strand, 12780805 - 12780892
Alignment:
Q  537 cttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaa 624  Q
    |||||||||||||||||||||||||||||||||||||||||||||    ||||||| ||  ||||||||||||||  | |||||||||    
T  12780805 cttattggtttaaatcattgtggatctacactttgaaaattgaaccaacacaaagtagtgagacatacattgattccacctaataaaa 12780892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 534 - 611
Target Start/End: Original strand, 12784982 - 12785059
Alignment:
Q  534 tctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgatt 611  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||   | ||||| ||  ||||||||||||||    
T  12784982 tctcttattggtttaaatcattatggatctacactttgaaaattgaactaacataaagtagtaagacatacattgatt 12785059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 528 - 629
Target Start/End: Complemental strand, 2676038 - 2675937
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||||| | ||||||||||||| |||||||| |||||| |||||||||| |||    |||||||||| ||||||||||||| || ||  ||||||||||    
T  2676038 actcacttttttattggtttaaaccattgtgggtctacattttgaaaattaaacctaaacaaagtggtgggacatacattgaattcattcaataaaagag 2675939  T
Q  628 tg 629  Q
    ||    
T  2675938 tg 2675937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 528 - 582
Target Start/End: Original strand, 16187469 - 16187523
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaact 582  Q
    |||||||| ||||||||||||||| ||||| | ||||||||||||||||||||||    
T  16187469 actcactcgcttattggtttaaataattgtaggtctacactttgaaaattgaact 16187523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 528 - 582
Target Start/End: Original strand, 16187687 - 16187741
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaact 582  Q
    |||||||| ||||||||||||||| ||||| | ||||||||||||||||||||||    
T  16187687 actcactcgcttattggtttaaataattgtaggtctacactttgaaaattgaact 16187741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 538 - 666
Target Start/End: Original strand, 35128769 - 35128898
Alignment:
Q  538 ttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatac 636  Q
    ||||||| | |||||| ||| ||| ||||||||||||||| |||| |  | |||||||| |||||||||||||||||| | ||||||||||||  | | |    
T  35128769 ttattgggtgaaatcaatgtaggacctacactttgaaaatggaacccacataaagtggtgggacatacattgattttacccaataaaagagtg--actgc 35128866  T
Q  637 t--agagagtgttgaaaagtgagtgttgctag 666  Q
    |  |||||||||| ||||| ||||||||||||    
T  35128867 tagagagagtgttcaaaagagagtgttgctag 35128898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 528 - 629
Target Start/End: Original strand, 19090251 - 19090353
Alignment:
Q  528 actcactctcttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 626  Q
    ||||||||| ||||||||| || ||| ||| ||| |||||||||| |||| |||| |  | |||||||| |||||||||||||||| | | |||||||||    
T  19090251 actcactcttttattggttgaattcaatgtaggacctacactttggaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaaga 19090350  T
Q  627 gtg 629  Q
    |||    
T  19090351 gtg 19090353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 520 - 577
Target Start/End: Original strand, 17144700 - 17144757
Alignment:
Q  520 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaatt 577  Q
    ||||||| ||| ||||  ||||| |||||||||||||||| |||||||||||||||||    
T  17144700 tctttaatacttactcctttattagtttaaatcattgtgggtctacactttgaaaatt 17144757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 528 - 561
Target Start/End: Original strand, 34882267 - 34882300
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggat 561  Q
    ||||||||||||||||||||||||||||||||||    
T  34882267 actcactctcttattggtttaaatcattgtggat 34882300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 528 - 671
Target Start/End: Original strand, 12753797 - 12753940
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    |||| |||| ||||| |||||||||||||||  | |||||  ||||||| |||| |  |||||||||| |||||| |||  |||||||| ||| ||||||    
T  12753797 actcgctcttttattagtttaaatcattgtgagtgtacaccctgaaaatagaacccacacaaagtggtgggacatgcatgtattttatccaatgaaagag 12753896  T
Q  628 tg-taaatactagagagtgttgaaaagtgagtgttgctagtattc 671  Q
    || |   || || |||||||| |||||||||||||||||| ||||    
T  12753897 tgattgcta-taaagagtgttcaaaagtgagtgttgctagcattc 12753940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 528 - 583
Target Start/End: Original strand, 8441886 - 8441941
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactc 583  Q
    ||||||||| ||||||||||| || ||||  | |||||||||||||||||||||||    
T  8441886 actcactcttttattggtttagattattgaaggtctacactttgaaaattgaactc 8441941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 528 - 583
Target Start/End: Original strand, 8450690 - 8450745
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactc 583  Q
    ||||||||| ||||||||||| || ||||  | |||||||||||||||||||||||    
T  8450690 actcactcttttattggtttagattattgaaggtctacactttgaaaattgaactc 8450745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 671
Target Start/End: Complemental strand, 12753791 - 12753758
Alignment:
Q  638 agagagtgttgaaaagtgagtgttgctagtattc 671  Q
    |||||||||||||||| |||||||||||||||||    
T  12753791 agagagtgttgaaaagagagtgttgctagtattc 12753758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 3e-35; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 508 - 628
Target Start/End: Complemental strand, 39471320 - 39471200
Alignment:
Q  508 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 607  Q
    ||||||||||| ||| ||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||    |||||||||| |||||||||||    
T  39471320 ttttaaacattctctctaatactcactctcttattggtttaaatcattgtgggtctacactttgaagattgaaccaacacaaagtggtgggacatacatt 39471221  T
Q  608 gattttatctaataaaagagt 628  Q
    ||||| |||||||||||||||    
T  39471220 gatttcatctaataaaagagt 39471200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 520 - 665
Target Start/End: Complemental strand, 43771277 - 43771132
Alignment:
Q  520 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaa 619  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |  ||| |||||| |||||||||||||||| ||| ||    
T  43771277 tctttaatactcactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccacacagagtggtgggacatacattgatttcatccaa 43771178  T
Q  620 taaaagagtg-taaatactagagagtgttgaaaagtgagtgttgcta 665  Q
    ||||||||||    |||  |||||||||| |||||||||||||||||    
T  43771177 taaaagagtgagtcata-gagagagtgttcaaaagtgagtgttgcta 43771132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 528 - 668
Target Start/End: Complemental strand, 20454681 - 20454543
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||||    ||||||||  ||||||||||||||||||||||||||||||||    
T  20454681 actcactctgttattgatttaaatcattgtggatctacactttgaaaattgaaccaacacaaagtg--tggacatacattgattttatctaataaaagag 20454584  T
Q  628 tgtaaatact--agagagtgttgaaaagtgagtgttgctagta 668  Q
    ||  | | ||  ||||||||||||||||| |||||||||||||    
T  20454583 tg--agtgctagagagagtgttgaaaagtaagtgttgctagta 20454543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 530 - 662
Target Start/End: Original strand, 10169684 - 10169814
Alignment:
Q  530 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    |||||||||||||||||||||| ||||||||||||   ||||||||||||||||  |||||||||| ||||||| |||||||| ||| ||||| ||||||    
T  10169684 tcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtaggacatatattgatttcatccaataatagagtg 10169783  T
Q  630 taaatactagagagtgttgaaaagtgagtgttg 662  Q
      |||| |||||||||||||||||||| |||||    
T  10169784 --aatattagagagtgttgaaaagtgaatgttg 10169814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 528 - 666
Target Start/End: Complemental strand, 8109099 - 8108961
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||||    ||||| | || |||||||||||||||| | | ||||||||||    
T  8109099 actcactttcttattggtttaaatcattgtgggtctacactttgaaaattgaacaaacacaaattagtgggacatacattgatttcacccaataaaagag 8109000  T
Q  628 tgtaaatact--agagagtgttgaaaagtgagtgttgctag 666  Q
    ||  | | ||  |||||||||||||||||||||||||||||    
T  8108999 tg--agtgctagagagagtgttgaaaagtgagtgttgctag 8108961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 529 - 671
Target Start/End: Complemental strand, 50164537 - 50164395
Alignment:
Q  529 ctcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagt 628  Q
    |||||| |||||||||||||||||||||||  ||||||||||||||||||||| |  ||||| |||| ||| |||||||||||||||| |||||| ||||    
T  50164537 ctcactttcttattggtttaaatcattgtgagtctacactttgaaaattgaacccccacaaaatggtgggagatacattgattttatccaataaatgagt 50164438  T
Q  629 gtaaatact--agagagtgttgaaaagtgagtgttgctagtattc 671  Q
    |  | | ||  |||||||||| ||||||||||||| |||||||||    
T  50164437 g--agtgctagagagagtgttaaaaagtgagtgttactagtattc 50164395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 528 - 629
Target Start/End: Complemental strand, 722300 - 722199
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||||   |||||||||| |||||||| ||||||| ||| ||||||| ||    
T  722300 actcactctcttattggtttaaatcattgtgggtctacactttaaaaattgaacttacacaaagtggtgggacatactttgatttcatccaataaaaaag 722201  T
Q  628 tg 629  Q
    ||    
T  722200 tg 722199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 528 - 629
Target Start/End: Complemental strand, 47009332 - 47009231
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||  |||||| |||  |||| ||||| |||||||| ||||||||||    
T  47009332 actcactttcttattggtttaaatcattgtgtatctacactttgaaaattgaactcacacaaagcggtgagacaaacattaattttatccaataaaagag 47009233  T
Q  628 tg 629  Q
    ||    
T  47009232 tg 47009231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 528 - 671
Target Start/End: Original strand, 33653526 - 33653669
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||||| ||||||||||||||||||||||||||| | | |||||||||||||  |  ||||| |||| |||||||||||||||| ||| |||||| |||    
T  33653526 actcactttcttattggtttaaatcattgtggatcaatattttgaaaattgaaaccccacaaaatggtgggacatacattgatttcatcaaataaatgag 33653625  T
Q  628 tg-taaatactagagagtgttgaaaagtgagtgttgctagtattc 671  Q
    || | ||||  ||||||||||||||| ||||||||||||| ||||    
T  33653626 tgattaata-gagagagtgttgaaaactgagtgttgctagcattc 33653669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 535 - 671
Target Start/End: Complemental strand, 49077385 - 49077249
Alignment:
Q  535 ctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaat 634  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||| |  |||||||||| ||||||| ||| |||||||||||||||||| ||  | |    
T  49077385 ctcttattggtttaaatcattgtgggtctacactttaaaaattgaacccacacaaagtggtgggacatatattaattttatctaataaaagaatg--agt 49077288  T
Q  635 act--agagagtgttgaaaagtgagtgttgctagtattc 671  Q
     ||  ||||| ||||||||| ||||||||||||| ||||    
T  49077287 gctaaagagaatgttgaaaactgagtgttgctagcattc 49077249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 528 - 629
Target Start/End: Original strand, 754617 - 754718
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||||   |||||||||| |||||||| |||| || ||| ||||||| ||    
T  754617 actcactctcttattggtttaaatcattgtgggtctacactttaaaaattgaacttacacaaagtggtgggacatactttgagttcatccaataaaaaag 754716  T
Q  628 tg 629  Q
    ||    
T  754717 tg 754718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 533 - 671
Target Start/End: Original strand, 20225383 - 20225519
Alignment:
Q  533 ctctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaa 632  Q
    ||||||||||||||||||||||||||  ||||||||||| |||| |||| |  | |||||||| |||||| ||| ||||  ||| ||||||||||||  |    
T  20225383 ctctcttattggtttaaatcattgtgagtctacactttggaaatagaacccacaaaaagtggtgggacatgcatggattccatccaataaaagagtg--a 20225480  T
Q  633 atactagagagtgttgaaaagtgagtgttgctagtattc 671  Q
     | |||||||||||| |||||||||||||||||| ||||    
T  20225481 gtgctagagagtgttcaaaagtgagtgttgctagcattc 20225519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 530 - 624
Target Start/End: Complemental strand, 24834719 - 24834625
Alignment:
Q  530 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaa 624  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||| |  ||||| |||| |||||||||||||||  ||| |||||||    
T  24834719 tcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacccacacaaaatggtgggacatacattgattccatccaataaaa 24834625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 528 - 671
Target Start/End: Original strand, 26361345 - 26361480
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    |||||||| ||||||||||||||||||| ||| ||||||||||||| ||||||| |  ||||| |||| || |||||||||| || ||| ||||||||||    
T  26361345 actcactcacttattggtttaaatcattatgggtctacactttgaatattgaacccacacaaaatggtgggtcatacattgacttcatccaataaaagag 26361444  T
Q  628 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 671  Q
    |||         ||||||||||||||||||||||||||| ||||    
T  26361445 tgt--------tagagtgttgaaaagtgagtgttgctagcattc 26361480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 508 - 629
Target Start/End: Original strand, 24938432 - 24938553
Alignment:
Q  508 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 607  Q
    |||| |||| ||||| ||| ||| |||||||||||||||||||||||||| | |||||||||| |||||||||  |  ||||| |||| |||||||||||    
T  24938432 ttttcaacactttctctaatacttactctcttattggtttaaatcattgtaggtctacactttaaaaattgaatccaaacaaaatggtgggacatacatt 24938531  T
Q  608 gattttatctaataaaagagtg 629  Q
    ||||  ||| ||||||||||||    
T  24938532 gattacatccaataaaagagtg 24938553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 530 - 629
Target Start/End: Original strand, 50481584 - 50481683
Alignment:
Q  530 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    |||||||||||||||||||||| ||||||  |||||||||||||||| |||  | |||||||||||  ||||||| ||||||| ||| ||||||||||||    
T  50481584 tcactctcttattggtttaaatgattgtgtgtctacactttgaaaatagaaaccatacaaagtggtgagacatactttgatttcatccaataaaagagtg 50481683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 528 - 629
Target Start/End: Complemental strand, 49242313 - 49242212
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||| ||||||||||||||||||||||||| |||||||| ||||||||||||| |  |||||||| | ||||||| |||||||| ||| ||| ||| ||    
T  49242313 actcattctcttattggtttaaatcattgtgaatctacacattgaaaattgaacccacacaaagtgatgggacatatattgatttcatccaattaaaaag 49242214  T
Q  628 tg 629  Q
    ||    
T  49242213 tg 49242212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 522 - 628
Target Start/End: Complemental strand, 22542530 - 22542424
Alignment:
Q  522 tttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaata 621  Q
    ||||| ||||||||||||||| ||||||||||||||||  |||  ||||||||||||||| |  |||||||||| | |||||| ||||||| ||  ||||    
T  22542530 tttaatactcactctcttattagtttaaatcattgtgggactattctttgaaaattgaacccacacaaagtggtggaacatactttgatttcattcaata 22542431  T
Q  622 aaagagt 628  Q
    |||||||    
T  22542430 aaagagt 22542424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 508 - 661
Target Start/End: Original strand, 19937189 - 19937341
Alignment:
Q  508 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 607  Q
    ||||||||| | |||||||  |||||||| || ||||||| ||||||||| |||||| ||||||||||| ||||||  | | | |||| |||||||||||    
T  19937189 ttttaaacactctctttaattctcactcttttgttggtttgaatcattgtcgatctatactttgaaaatagaactcacatataatggtgggacatacatt 19937288  T
Q  608 gattttatctaataaaagagtgtaaatactagagagtgttgaaaagtgagtgtt 661  Q
    |||| |||| ||| ||| | | ||||| ||||||||  || |||||||||||||    
T  19937289 gattgtatccaattaaaaaat-taaatgctagagagaatttaaaagtgagtgtt 19937341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 528 - 629
Target Start/End: Original strand, 34129437 - 34129538
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||||||| ||||||||||||| |||||||  || |||||||||||||||||| |  |||||||||| ||| |||||||||| | ||| |||| |||||    
T  34129437 actcactcttttattggtttaaaccattgtgagtccacactttgaaaattgaacacacacaaagtggtgggatatacattgatctcatccaatagaagag 34129536  T
Q  628 tg 629  Q
    ||    
T  34129537 tg 34129538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 508 - 629
Target Start/End: Complemental strand, 52671993 - 52671872
Alignment:
Q  508 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 607  Q
    ||||||||| | ||||||| ||||||| ||||||| ||||||||||||| | || |||||||| |||||||||||   | ||| |||| |||||||||||    
T  52671993 ttttaaacactctctttaatactcactatcttattagtttaaatcattgagaatttacactttaaaaattgaacttacataaaatggtgggacatacatt 52671894  T
Q  608 gattttatctaataaaagagtg 629  Q
     |||| ||| ||||||| ||||    
T  52671893 tatttcatccaataaaaaagtg 52671872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 508 - 629
Target Start/End: Original strand, 37451030 - 37451149
Alignment:
Q  508 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 607  Q
    |||||||||  |||| ||| ||||||||| ||||||||||||||||||| |  |||||||||||||||| ||||||  ||||| ||||  ||  |||||     
T  37451030 ttttaaacaccttctctaatactcactcttttattggtttaaatcattgcgagtctacactttgaaaatagaactc--acaaattggtaagatgtacatg 37451127  T
Q  608 gattttatctaataaaagagtg 629  Q
    |||| |||| ||||||||||||    
T  37451128 gattctatccaataaaagagtg 37451149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 531 - 629
Target Start/End: Original strand, 48339380 - 48339478
Alignment:
Q  531 cactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    |||||| ||||||||||||| |||| ||| ||||| ||||||||||||||| |  |||||||||| | ||||||||||||||  || ||||| ||||||    
T  48339380 cactcttttattggtttaaagcattatgggtctacgctttgaaaattgaacccacacaaagtggtggaacatacattgatttattccaataagagagtg 48339478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 536 - 629
Target Start/End: Complemental strand, 38636472 - 38636379
Alignment:
Q  536 tcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    |||||||| | |||||||||||||||||||||||| ||||||  || |  | ||||| ||  ||||||||||||||||||| ||||||||||||    
T  38636472 tcttattgatataaatcattgtggatctacactttaaaaattagacccacataaagtagtgagacatacattgattttatcaaataaaagagtg 38636379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 532 - 623
Target Start/End: Original strand, 31250924 - 31251015
Alignment:
Q  532 actctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaa 623  Q
    ||||| |||||| ||||||||||||||| |||||| ||||||||||||||    | ||| |||| |||||||||||||||| ||| ||||||    
T  31250924 actcttttattgatttaaatcattgtgggtctacattttgaaaattgaacgtccataaaatggtgggacatacattgatttcatccaataaa 31251015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 538 - 624
Target Start/End: Original strand, 38537560 - 38537649
Alignment:
Q  538 ttattggtttaaatcattgtggatctacactttg---aaaattgaactcttacaaagtggttggacatacattgattttatctaataaaa 624  Q
    |||||| ||||||||||| || ||||||||||||   |||||||||||| |||||||| ||  ||||||||||||||| ||| |||||||    
T  38537560 ttattgatttaaatcattatgaatctacactttgttgaaaattgaactcatacaaagtagtaagacatacattgatttcatcaaataaaa 38537649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 532 - 621
Target Start/End: Original strand, 45310989 - 45311078
Alignment:
Q  532 actctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaata 621  Q
    |||||||||||| |||||||||||||   ||| ||||||||||||||||  |  |||||||||| ||||||| |||||||| ||| ||||    
T  45310989 actctcttattgatttaaatcattgtaagtcttcactttgaaaattgaatccccacaaagtggtgggacatatattgatttcatccaata 45311078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 250 - 310
Target Start/End: Complemental strand, 11393209 - 11393149
Alignment:
Q  250 gtgaaaactaaacattatatttcagagataaaaaatgcacaactactaatgtgtttatata 310  Q
    ||||||||| || ||||||||||||||||||| |||| ||||| ||| |||||||||||||    
T  11393209 gtgaaaacttaatattatatttcagagataaataatgtacaaccactgatgtgtttatata 11393149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 250 - 310
Target Start/End: Complemental strand, 11402936 - 11402876
Alignment:
Q  250 gtgaaaactaaacattatatttcagagataaaaaatgcacaactactaatgtgtttatata 310  Q
    ||||||||| || ||||||||||||||||||| |||| ||||| ||| |||||||||||||    
T  11402936 gtgaaaacttaatattatatttcagagataaataatgtacaaccactgatgtgtttatata 11402876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 528 - 671
Target Start/End: Original strand, 40991626 - 40991769
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||||||| |||||||||||||||||||||| |||||||||   |||| |  |   ||||| | ||| ||||||| |||||||| ||| ||| ||||||    
T  40991626 actcactcttttattggtttaaatcattgtgggtctacacttcagaaatagtgccaatacaatggggtgggacatatattgatttcatccaatgaaagag 40991725  T
Q  628 tg-taaatactagagagtgttgaaaagtgagtgttgctagtattc 671  Q
    ||    |||  ||||||||||||||||||||||||||||| ||||    
T  40991726 tgagtgata-gagagagtgttgaaaagtgagtgttgctagcattc 40991769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 547 - 662
Target Start/End: Original strand, 46242000 - 46242113
Alignment:
Q  547 taaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatactagagagtgt 646  Q
    ||||||||||||| |||| | ||||||||||||||    ||||| |||| ||||||||| |||||| |||  |||||  ||||| | | |||||||||||    
T  46242000 taaatcattgtgggtctatattttgaaaattgaacctacacaaaatggtgggacatacaatgatttcatcccataaa--agtgtgagttctagagagtgt 46242097  T
Q  647 tgaaaagtgagtgttg 662  Q
    | ||||||||||||||    
T  46242098 taaaaagtgagtgttg 46242113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 538 - 629
Target Start/End: Original strand, 5044587 - 5044678
Alignment:
Q  538 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    ||||||||||||||| |||||| |||||| ||| ||||||||||||  ||||| | ||  |||||| |||||||| ||| ||||||| ||||    
T  5044587 ttattggtttaaatcgttgtgggtctacattttaaaaattgaactcacacaaaatagtgtgacatatattgatttcatccaataaaaaagtg 5044678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 538 - 629
Target Start/End: Original strand, 49682838 - 49682929
Alignment:
Q  538 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    |||||||||||||||  ||||| |||||||||||||||||||| ||  | ||||||||  || |||||||||||| |||  |||||| ||||    
T  49682838 ttattggtttaaatcgatgtggctctacactttgaaaattgaattcaaataaagtggtgagatatacattgatttcatccgataaaaaagtg 49682929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 550 - 665
Target Start/End: Complemental strand, 50571985 - 50571870
Alignment:
Q  550 atcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatact--agagagtgtt 647  Q
    ||||||| || ||||||||||||||||||||  |  | ||| || | || ||||||||||||| |||||||||||||  |||| | ||  ||||||||||    
T  50571985 atcattgcgggtctacactttgaaaattgaagccacataaattgatggggcatacattgatttcatctaataaaaga--gtaagtgctagagagagtgtt 50571888  T
Q  648 gaaaagtgagtgttgcta 665  Q
    ||||||||| ||||||||    
T  50571887 gaaaagtgactgttgcta 50571870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 528 - 574
Target Start/End: Complemental strand, 11895180 - 11895134
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaa 574  Q
    ||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  11895180 actcactctcttattcgttcaaatcattgtgggtctacactttgaaa 11895134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 508 - 629
Target Start/End: Complemental strand, 13070104 - 13069983
Alignment:
Q  508 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacat 606  Q
    |||| |||||||||| ||| ||||||||| ||||||  | |||||| ||| ||| ||||||||||||||| |||| |  | |||||||| | ||||||||    
T  13070104 ttttgaacattttctctaacactcactcttttattgagtaaaatcaatgtaggacctacactttgaaaatggaacccacataaagtggtggaacatacat 13070005  T
Q  607 tgattttatctaataaaagagtg 629  Q
    |||||| | | ||||||||||||    
T  13070004 tgatttca-ccaataaaagagtg 13069983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 508 - 629
Target Start/End: Original strand, 25719129 - 25719251
Alignment:
Q  508 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggat-ctacactttgaaaattgaactcttacaaagtggttggacatacat 606  Q
    |||| |||| ||||| ||| ||||||||||| ||||| |||||||||||||| | ||||| |||| ||||  ||| |  | |||||||| ||||||||||    
T  25719129 ttttgaacaatttctctaatactcactctctgattgggttaaatcattgtgggtcctacattttggaaatgaaacccacataaagtggtgggacatacat 25719228  T
Q  607 tgattttatctaataaaagagtg 629  Q
    |||||| | | ||||| ||||||    
T  25719229 tgatttcaaccaataagagagtg 25719251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 528 - 629
Target Start/End: Complemental strand, 51206187 - 51206085
Alignment:
Q  528 actcactctcttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 626  Q
    ||||||||| ||||||| | |||||| ||| ||| ||||| |||||||||  |||||  | |||||| | |||||||||||||||| |||||||||| ||    
T  51206187 actcactcttttattgggtgaaatcaatgtaggacctacattttgaaaatgaaactcacataaagtgatgggacatacattgatttcatctaataaatga 51206088  T
Q  627 gtg 629  Q
    |||    
T  51206087 gtg 51206085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 536 - 613
Target Start/End: Complemental strand, 13520084 - 13520007
Alignment:
Q  536 tcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgatttt 613  Q
    |||||||||||||||||||||||| | ||||| ||| |||  |||| |  |||||||||| | |||||||||||||||    
T  13520084 tcttattggtttaaatcattgtgggtatacacattggaaacagaacccgcacaaagtggtggaacatacattgatttt 13520007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 538 - 630
Target Start/End: Original strand, 18421878 - 18421968
Alignment:
Q  538 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgt 630  Q
    ||||||||||||||||||||  ||  | ||||| |||||| ||| |  ||| |||||| |||||||||||||||| ||||||||||| |||||    
T  18421878 ttattggtttaaatcattgtaaatacatactttaaaaattaaacac--acacagtggtgggacatacattgatttcatctaataaaaaagtgt 18421968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 588 - 629
Target Start/End: Original strand, 21776942 - 21776983
Alignment:
Q  588 aaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    |||||||| |||||||||||||||||||| ||||||||||||    
T  21776942 aaagtggtaggacatacattgattttatccaataaaagagtg 21776983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 662
Target Start/End: Original strand, 33995985 - 33996106
Alignment:
Q  541 ttggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatactaga 640  Q
    |||||||||| |||||||  | || | |||||||||||||| |  | ||||||||  ||||||||||||||| || ||||||||||||| |  |   |||    
T  33995985 ttggtttaaaccattgtgagtttaaattttgaaaattgaacccacaaaaagtggtgagacatacattgatttgatttaataaaagagtgaatgttagaga 33996084  T
Q  641 gagtgttgaaaagtgagtgttg 662  Q
    | ||||||||||| ||||||||    
T  33996085 gtgtgttgaaaagagagtgttg 33996106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 671
Target Start/End: Original strand, 47237812 - 47237921
Alignment:
Q  562 ctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatact--agagagtgttgaaaagtgagtg 659  Q
    |||||||||||||||  ||||  || |||||||| ||||||| |||||||| ||| ||||||||||||  ||| ||  |||||||||| ||||| |||||    
T  47237812 ctacactttgaaaatgaaacttatataaagtggtgggacatatattgatttcatccaataaaagagtg--aatgctagagagagtgttcaaaagagagtg 47237909  T
Q  660 ttgctagtattc 671  Q
    ||| ||| ||||    
T  47237910 ttgatagcattc 47237921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 558 - 629
Target Start/End: Original strand, 30866999 - 30867070
Alignment:
Q  558 ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    ||||||||||||||||||| |||| |  | |||||||| ||||||||||| |||| ||| ||||||| ||||    
T  30866999 ggatctacactttgaaaatggaacccacataaagtggtgggacatacattaatttaatccaataaaaaagtg 30867070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 530 - 625
Target Start/End: Original strand, 50652375 - 50652470
Alignment:
Q  530 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaag 625  Q
    ||||| |||||||| ||||||| |||||   |||||| ||||||||||||||    ||||||||||  || |||||||||||||||  ||||||||    
T  50652375 tcactttcttattgatttaaattattgtacgtctacattttgaaaattgaacctacacaaagtggtgagatatacattgattttatgcaataaaag 50652470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 530 - 612
Target Start/End: Original strand, 46536301 - 46536383
Alignment:
Q  530 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattt 612  Q
    |||||||||||||| ||||||  | ||||| | |||||||||||||||||||    ||||||||||  |||||| ||||||||    
T  46536301 tcactctcttattgctttaaaatagtgtgggtttacactttgaaaattgaacatacacaaagtggtatgacatatattgattt 46536383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 530 - 580
Target Start/End: Original strand, 52279298 - 52279348
Alignment:
Q  530 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaa 580  Q
    |||||||| ||||| | ||||||||||||| |||| |||||||||||||||    
T  52279298 tcactctcctattgatctaaatcattgtgggtctaaactttgaaaattgaa 52279348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 539 - 580
Target Start/End: Complemental strand, 46287573 - 46287532
Alignment:
Q  539 tattggtttaaatcattgtggatctacactttgaaaattgaa 580  Q
    ||||||||||||||||||||  || |||||||||||||||||    
T  46287573 tattggtttaaatcattgtgagtcaacactttgaaaattgaa 46287532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 588 - 629
Target Start/End: Complemental strand, 48608163 - 48608122
Alignment:
Q  588 aaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    |||||||| ||||||||||| |||||||| ||||||||||||    
T  48608163 aaagtggtgggacatacattaattttatccaataaaagagtg 48608122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 1e-34; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 489 - 629
Target Start/End: Original strand, 32211786 - 32211922
Alignment:
Q  489 attagcaacactctcttaattttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttaca 588  Q
    |||||||||||||||||    || |||| |||||||||   |||||||||||||||||||||||||||||| ||||||| || ||||||||||||  |||    
T  32211786 attagcaacactctctt----ttcaacactttctttaatgatcactctcttattggtttaaatcattgtgggtctacaccttaaaaattgaactcacaca 32211881  T
Q  589 aagtggttggacatacattgattttatctaataaaagagtg 629  Q
    |||| ||||||||||||||||||| ||||||||||||||||    
T  32211882 aagtagttggacatacattgatttcatctaataaaagagtg 32211922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 528 - 671
Target Start/End: Complemental strand, 41958226 - 41958085
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |  ||||| |||| |||||||||||||||| ||| |||||| |||    
T  41958226 actcactctcttattggtttaaatcactgtgggtctacactttgaaaattgaacccccacaaaatggtgggacatacattgatttcatccaataaatgag 41958127  T
Q  628 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 671  Q
    ||  | | || ||||||||||||||||||||||| |||| ||||    
T  41958126 tg--agtgcttgagagtgttgaaaagtgagtgttactagcattc 41958085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 528 - 671
Target Start/End: Original strand, 26980299 - 26980442
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    |||||||||||||||| ||||||||||||||||| || | ||||||||||||||||  ||||| |||| |||||||||||||||| ||| ||||| ||||    
T  26980299 actcactctcttattgatttaaatcattgtggatgtatattttgaaaattgaactcacacaaaatggtgggacatacattgatttcatccaataatagag 26980398  T
Q  628 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 671  Q
    ||   ||   ||||||||||||||||||||||||| ||| ||||    
T  26980399 tgagtattagagagagtgttgaaaagtgagtgttgttagcattc 26980442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 513 - 623
Target Start/End: Complemental strand, 33193208 - 33193098
Alignment:
Q  513 aacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattt 612  Q
    |||| ||||| ||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||| || ||||| |||| | ||||||||||||||    
T  33193208 aacactttctctaatactcattctcttattggtttaaatcattgtgggtctacactttgaaaattgaaccctcacaaaatggtggcacatacattgattt 33193109  T
Q  613 tatctaataaa 623  Q
     ||| ||||||    
T  33193108 catccaataaa 33193098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 528 - 629
Target Start/End: Original strand, 30678948 - 30679049
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||||||||||||||| |||||||||||||  ||||||||||||||||||||| |  |||||||||| |||||||||||||||||||| | | ||||||    
T  30678948 actcactctcttattggcttaaatcattgtgagtctacactttgaaaattgaacccacacaaagtggtgggacatacattgattttatccattgaaagag 30679047  T
Q  628 tg 629  Q
    ||    
T  30679048 tg 30679049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 528 - 629
Target Start/End: Original strand, 41948183 - 41948284
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||    |||||||||| | | |||||||||||||||| ||||||||||    
T  41948183 actcactctcttattgatttaaatcattgtggatttacactttgaaaattgaaccaacacaaagtggtagaatatacattgattttatccaataaaagag 41948282  T
Q  628 tg 629  Q
    ||    
T  41948283 tg 41948284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 528 - 629
Target Start/End: Original strand, 19101638 - 19101739
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||||| |||||||||||||||||||||  |||||||||||||||||| ||||||  | |||||||| |||||||||||||||| ||| ||||||| ||    
T  19101638 actcactttcttattggtttaaatcattgcagatctacactttgaaaatagaactcgcataaagtggtgggacatacattgatttcatccaataaaatag 19101737  T
Q  628 tg 629  Q
    ||    
T  19101738 tg 19101739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 528 - 671
Target Start/End: Complemental strand, 2225367 - 2225226
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||||| |||||||||||||||||| ||| | ||||||||||| |||  |||| |  |||||||||| |||||||||||||||| ||| ||||||||||    
T  2225367 actcactttcttattggtttaaatcactgtcggtctacactttgtaaaccgaacccacacaaagtggtgggacatacattgatttcatccaataaaagag 2225268  T
Q  628 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 671  Q
    ||    | ||||||||||||||||| |||||||| |||| ||||    
T  2225267 tg--ggtgctagagagtgttgaaaattgagtgttactagcattc 2225226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 536 - 671
Target Start/End: Original strand, 6325858 - 6325990
Alignment:
Q  536 tcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaata 635  Q
    |||| |||||||| |||||||||| | |||||||||||||  ||||||  ||||| |||| ||||||||||||||||||| ||||||| |||||  | ||    
T  6325858 tcttgttggtttacatcattgtgggtttacactttgaaaaa-gaactcacacaaaatggtgggacatacattgattttatttaataaatgagtg--atta 6325954  T
Q  636 ctagagagtgttgaaaagtgagtgttgctagtattc 671  Q
     ||||||||||| ||||||||| |||||||||||||    
T  6325955 ttagagagtgttcaaaagtgagcgttgctagtattc 6325990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 531 - 671
Target Start/End: Complemental strand, 11987766 - 11987626
Alignment:
Q  531 cactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgt 630  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| |  || ||||||| | ||||||||| |||| ||| |||||| || |      
T  11987766 cactctcttaatggtttaaatcattgtgggtctacactttgaaaattgaacccgcactaagtggtggaacatacattaatttcatccaataaatgaataa 11987667  T
Q  631 aaatactagagagtgttgaaaagtgagtgttgctagtattc 671  Q
    |  |   ||||||||||||||||||||||||| ||||||||    
T  11987666 atgttggagagagtgttgaaaagtgagtgttgttagtattc 11987626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 536 - 629
Target Start/End: Original strand, 1093118 - 1093211
Alignment:
Q  536 tcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    ||||||| ||||||||||||||||| |||||||||| ||||  ||||| ||||||||||| | |||||||||||||| |||||||||| |||||    
T  1093118 tcttattagtttaaatcattgtggaactacactttggaaatataactcatacaaagtggtggaacatacattgatttcatctaataaacgagtg 1093211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 530 - 623
Target Start/End: Complemental strand, 39499535 - 39499442
Alignment:
Q  530 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaa 623  Q
    ||||| ||||||||  ||||||||||||||||||||| ||||||||||||||||  | |||||| |  ||||||||||||||||||||||||||    
T  39499535 tcactttcttattgaattaaatcattgtggatctacattttgaaaattgaactcacaaaaagtgatatgacatacattgattttatctaataaa 39499442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 490 - 671
Target Start/End: Original strand, 6133628 - 6133804
Alignment:
Q  490 ttagcaacactctcttaattttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaa 589  Q
    ||||||||||||||||    || |||||  ||| ||| |||||||||||||||||||||| ||||||||| | || |||||||||||||||| |  ||||    
T  6133628 ttagcaacactctctt----ttgaacatcctctctaatactcactctcttattggtttaa-tcattgtgggtgtagactttgaaaattgaacccacacaa 6133722  T
Q  590 agtggttggacatacattgattttatctaataaaagagtgtaaatactagagag--tgttgaaaagtgagtgttgctagtattc 671  Q
      |||| ||||||| |||||||| ||| |||||||| |||  | | ||||||||  ||||||||||||||||||||||| ||||    
T  6133723 tatggtgggacatatattgatttcatccaataaaagggtg--agtgctagagagattgttgaaaagtgagtgttgctagcattc 6133804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 528 - 620
Target Start/End: Complemental strand, 8899157 - 8899065
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaat 620  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||| |  |||||| ||| |||||||| || |||| |||||||    
T  8899157 actcactctcttattggtttaaattattgtggacctacactttgaaaattgaacccacacaaaggggtgggacatacctttatttcatctaat 8899065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 537 - 629
Target Start/End: Complemental strand, 22540502 - 22540410
Alignment:
Q  537 cttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    |||||||||||||||||||| |||||||||||||| |||| ||||||  | |||||||| |||||||||||||||| ||| ||||||| ||||    
T  22540502 cttattggtttaaatcattgcggatctacactttggaaatagaactcgcataaagtggtgggacatacattgatttcatccaataaaatagtg 22540410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 531 - 612
Target Start/End: Original strand, 10659808 - 10659889
Alignment:
Q  531 cactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattt 612  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||    |||||||||| |||||| |||||||||    
T  10659808 cactctcttattggtttaaatcatcgtgggtctacactttgaaaattgaacctacacaaagtggtcggacatccattgattt 10659889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 528 - 665
Target Start/End: Original strand, 28218085 - 28218222
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||||| |||||||  ||||||| | ||||| ||||||||||||||||||||  |  ||||||||||  ||||||||||||||| ||| ||||||||||    
T  28218085 actcactatcttattaatttaaattactgtggttctacactttgaaaattgaatccacacaaagtggtgagacatacattgatttcatccaataaaagag 28218184  T
Q  628 tgtaaatact--agagagtgttgaaaagtgagtgttgcta 665  Q
    ||  ||| ||  |||||| |||||||| ||||||||||||    
T  28218185 tg--aatgctaaagagagggttgaaaaatgagtgttgcta 28218222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 527 - 671
Target Start/End: Original strand, 3872670 - 3872813
Alignment:
Q  527 aactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 626  Q
    ||||| |||| |||||||||| ||||||||||| ||||||||||| |||||||||    ||||||||||  |||||| ||||| ||||| ||||| ||||    
T  3872670 aactctctcttttattggtttgaatcattgtgggtctacactttggaaattgaacctacacaaagtggtgtgacatatattga-tttatttaatagaaga 3872768  T
Q  627 gtgtaaatact--agagagtgttgaaaagtgagtgttgctagtattc 671  Q
    |||  | | ||  ||||||||||||||||||||||||||||| ||||    
T  3872769 gtg--agtgctagagagagtgttgaaaagtgagtgttgctagcattc 3872813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 537 - 629
Target Start/End: Complemental strand, 15523344 - 15523252
Alignment:
Q  537 cttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    |||||||||||||||||||| |||||||||||||  |||| ||||||  | |||||||| |||||||||||||||| ||| ||||||| ||||    
T  15523344 cttattggtttaaatcattgcggatctacactttagaaatagaactcgcataaagtggtgggacatacattgatttcatccaataaaatagtg 15523252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 537 - 629
Target Start/End: Complemental strand, 15531338 - 15531246
Alignment:
Q  537 cttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    |||||||||||||||||||| |||||||||||||  |||| ||||||  | |||||||| |||||||||||||||| ||| ||||||| ||||    
T  15531338 cttattggtttaaatcattgcggatctacactttagaaatagaactcgcataaagtggtgggacatacattgatttcatccaataaaatagtg 15531246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 520 - 576
Target Start/End: Original strand, 37552978 - 37553034
Alignment:
Q  520 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaat 576  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  37552978 tctttaatactcactctcttattgatttaaatcattgtggatctacactttgaaaat 37553034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 508 - 671
Target Start/End: Original strand, 8741240 - 8741405
Alignment:
Q  508 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 607  Q
    |||| |||| ||||| ||| ||||||||||||||| |||||||||||||||  | || |||||||||||||||| |  ||||| | ||  ||||||||||    
T  8741240 ttttgaacaatttctctaatactcactctcttattagtttaaatcattgtgtgtttatactttgaaaattgaacccacacaaattagtgagacatacatt 8741339  T
Q  608 gattttatctaataaaagagtgtaaatact----agagagtgttgaaaagtgagtgttgctagtattc 671  Q
    ||||| ||| ||||||| ||||  |  |||    ||||||| ||||||||||||||||||||| ||||    
T  8741340 gatttcatccaataaaaaagtg--accactaaagagagagttttgaaaagtgagtgttgctagcattc 8741405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 540 - 629
Target Start/End: Complemental strand, 49730995 - 49730906
Alignment:
Q  540 attggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    |||||||||||||||||||| ||||||||||||||||||||| |  ||||||| ||  |||||| |||  ||| ||||||||||||||||    
T  49730995 attggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtagtgtgacatatattagtttaatctaataaaagagtg 49730906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 508 - 660
Target Start/End: Complemental strand, 51732440 - 51732290
Alignment:
Q  508 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 607  Q
    |||| ||| |||||| ||| ||||||||| |||||||||||||| ||||||| | || |||||||||||| |||||  | ||||| || | | |||||||    
T  51732440 ttttgaacgttttctctaatactcactcttttattggtttaaattattgtgggtttatactttgaaaattaaactcacataaagtagtggaaaatacatt 51732341  T
Q  608 gattttatctaataaaagagtgtaaatactagagagtgttgaaaagtgagtgt 660  Q
     |||| ||| ||||||| ||||  |||  ||||||| ||||||||||||||||    
T  51732340 aatttcatcaaataaaaaagtg--aatgttagagagcgttgaaaagtgagtgt 51732290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 520 - 626
Target Start/End: Complemental strand, 31866466 - 31866361
Alignment:
Q  520 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaa 619  Q
    ||||||| ||||||| ||||||| |||||||||||||||||| |||||||| ||||||||||  | | ||| | || |||||||||||||||| ||| ||    
T  31866466 tctttaatactcactttcttattagtttaaatcattgtggat-tacactttaaaaattgaaccttcaaaaaatagtgggacatacattgatttcatccaa 31866368  T
Q  620 taaaaga 626  Q
     ||||||    
T  31866367 caaaaga 31866361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 528 - 622
Target Start/End: Complemental strand, 33114114 - 33114020
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataa 622  Q
    ||||||| | |||||||||||||||||| |||||||||||||||||||||||||    | ||| |||| ||||||||| |||||| | |||||||    
T  33114114 actcacttttttattggtttaaatcattctggatctacactttgaaaattgaacctacataaaatggtgggacatacaatgatttaaactaataa 33114020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 513 - 565
Target Start/End: Original strand, 16948551 - 16948603
Alignment:
Q  513 aacattttctttaaaactcactctcttattggtttaaatcattgtggatctac 565  Q
    |||||||||| ||| |||||||||||||||| |||||||||||||||||||||    
T  16948551 aacattttctctaatactcactctcttattgatttaaatcattgtggatctac 16948603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 528 - 624
Target Start/End: Complemental strand, 29673618 - 29673522
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaa 624  Q
    ||||||| | |||||||||||||| ||||| | ||||||||||||||||||||     ||||| |||| ||||||| |||||||||||| |||||||    
T  29673618 actcacttttttattggtttaaataattgtagttctacactttgaaaattgaaactacacaaaatggtgggacatatattgattttatccaataaaa 29673522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 533 - 629
Target Start/End: Complemental strand, 37525667 - 37525571
Alignment:
Q  533 ctctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    |||||||||| |||||||||||||| |||||| |||||||||||||||| |  | ||| |||| | |||||||| | ||||||| ||| ||||||||    
T  37525667 ctctcttattagtttaaatcattgtagatctagactttgaaaattgaacccacataaaatggtggaacatacatgggttttatccaatgaaagagtg 37525571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 530 - 671
Target Start/End: Complemental strand, 931515 - 931374
Alignment:
Q  530 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    ||||||| |||||||||||||||||||||| | || | |||||||||||||| |  | ||| || | |||||||||||| ||  ||  ||||||||||||    
T  931515 tcactcttttattggtttaaatcattgtgggtgtatattttgaaaattgaacccacaaaaaatgatgggacatacattgcttccattcaataaaagagtg 931416  T
Q  630 taaatactagagagtgttgaaaagtgagtgttgctagtattc 671  Q
       ||   ||| || |||||||||||||||||||||| ||||    
T  931415 agtattagagatagagttgaaaagtgagtgttgctagcattc 931374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 532 - 629
Target Start/End: Complemental strand, 15468359 - 15468262
Alignment:
Q  532 actctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    ||||| |||||  ||||||| ||||||| |||||||| |||||||||||| |  |||||||  |  |||||||||||||| ||| |||||||||||||    
T  15468359 actcttttattaatttaaattattgtgggtctacactatgaaaattgaacccacacaaagtaatgagacatacattgattctatttaataaaagagtg 15468262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 545 - 626
Target Start/End: Complemental strand, 46335223 - 46335142
Alignment:
Q  545 tttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 626  Q
    ||||||||||||||| |||| || ||||||||  |||||| |||||||||| ||| ||| |||||||| ||| |||||||||    
T  46335223 tttaaatcattgtgggtctatacattgaaaatataactctgacaaagtggtaggatatagattgatttcatccaataaaaga 46335142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 263 - 310
Target Start/End: Original strand, 1286185 - 1286232
Alignment:
Q  263 attatatttcagagataaaaaatgcacaactactaatgtgtttatata 310  Q
    ||||||||||||||||||| |||| ||||| |||||||||||||||||    
T  1286185 attatatttcagagataaataatgtacaaccactaatgtgtttatata 1286232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 536 - 615
Target Start/End: Original strand, 45179291 - 45179370
Alignment:
Q  536 tcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttat 615  Q
    |||||||  ||||| | ||||||| | ||||||||||||||||||| || |||||||| | | |||||||||||||||||    
T  45179291 tcttattaatttaagttattgtgggtttacactttgaaaattgaaccctcacaaagtgatggaacatacattgattttat 45179370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 528 - 629
Target Start/End: Original strand, 13114706 - 13114808
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatc-tacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 626  Q
    ||||||| ||| ||||| |||||||| ||||| |  |||| |||| |||| |||  | || |||||||| ||||||| ||||||||||||||||||||||    
T  13114706 actcactatctcattgggttaaatcaatgtgggttatacattttggaaatggaatccatataaagtggtgggacatatattgattttatctaataaaaga 13114805  T
Q  627 gtg 629  Q
    |||    
T  13114806 gtg 13114808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 528 - 629
Target Start/End: Complemental strand, 41918139 - 41918037
Alignment:
Q  528 actcactctcttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 626  Q
    ||||||||| ||||||| | |||||| ||| ||| ||||||||||||||| |||  |  | |||||||| |||||||||||||||| | | |||||||||    
T  41918139 actcactcttttattgggtaaaatcaatgtaggacctacactttgaaaatggaatccacataaagtggtgggacatacattgatttcacccaataaaaga 41918040  T
Q  627 gtg 629  Q
    |||    
T  41918039 gtg 41918037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 528 - 629
Target Start/End: Complemental strand, 15928698 - 15928597
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||||||| |||||||||||||||| |||   ||||||| |||||||| ||||||  ||||| ||||  |||||||||  |||  ||| ||||||||||    
T  15928698 actcactcttttattggtttaaatcactgtaagtctacaccttgaaaatagaactcacacaaaatggtgagacatacatgaattccatcaaataaaagag 15928599  T
Q  628 tg 629  Q
    ||    
T  15928598 tg 15928597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 508 - 624
Target Start/End: Complemental strand, 15906573 - 15906458
Alignment:
Q  508 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 607  Q
    |||| |||||| ||| ||| ||||| ||  |||||| |||||||||||||  ||||||| |||| |||||||  ||  ||||||| | ||||||||||||    
T  15906573 tttttaacattatctctaatactcattcgtttattgatttaaatcattgtaaatctacattttgtaaattgagttcacacaaagt-gatggacatacatt 15906475  T
Q  608 gattttatctaataaaa 624  Q
    ||||||||  |||||||    
T  15906474 gattttatgcaataaaa 15906458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 538 - 629
Target Start/End: Complemental strand, 29418615 - 29418523
Alignment:
Q  538 ttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    ||||||| | |||||| ||| |||||||||||||| |||| ||||||  | ||||||||  || ||||||| |||||||| ||||||||||||    
T  29418615 ttattgggtgaaatcaatgtaggatctacactttggaaatagaactcacataaagtggtgagatatacattaattttatccaataaaagagtg 29418523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 534 - 666
Target Start/End: Complemental strand, 35336997 - 35336871
Alignment:
Q  534 tctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaa 633  Q
    |||||||||||||||||||||||||  |||||| |  ||||||||||| |  ||||||||||     | |||||||||| ||| ||||||| | ||  |     
T  35336997 tctcttattggtttaaatcattgtgtgtctacattaagaaaattgaacccacacaaagtggt----gagacattgatttcatccaataaaataatg--ag 35336904  T
Q  634 tactagagagtgttgaaaagtgagtgttgctag 666  Q
    | ||||||  |||||||||||||||||||||||    
T  35336903 tgctagaggatgttgaaaagtgagtgttgctag 35336871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 528 - 623
Target Start/End: Original strand, 39974237 - 39974326
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaa 623  Q
    ||||||||||||||||||||||||||||||  |||| |||||      |||||| | |||||| |||| | |||| ||||||||| ||||||||||    
T  39974237 actcactctcttattggtttaaatcattgtaaatctgcactt------ttgaacccatacaaaatggtggaacatccattgatttcatctaataaa 39974326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 528 - 583
Target Start/End: Original strand, 12767365 - 12767420
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactc 583  Q
    ||||||||| |||||||||||||||||| ||  |||||||||| ||||| ||||||    
T  12767365 actcactcttttattggtttaaatcattatgagtctacactttaaaaatagaactc 12767420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 532 - 579
Target Start/End: Complemental strand, 15906679 - 15906632
Alignment:
Q  532 actctcttattggtttaaatcattgtggatctacactttgaaaattga 579  Q
    |||||||||||  ||||||| ||||| |||||||||||||||||||||    
T  15906679 actctcttattaatttaaattattgtagatctacactttgaaaattga 15906632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 538 - 581
Target Start/End: Complemental strand, 44272051 - 44272008
Alignment:
Q  538 ttattggtttaaatcattgtggatctacactttgaaaattgaac 581  Q
    |||||| ||||||||||||| | |||||||||||||||||||||    
T  44272051 ttattgatttaaatcattgttgttctacactttgaaaattgaac 44272008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 538 - 629
Target Start/End: Complemental strand, 50539257 - 50539166
Alignment:
Q  538 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    ||||| ||||||||||||| |  ||||||||  ||||||||||| |  | |||||||| | |||||| ||||||| ||| ||||||||||||    
T  50539257 ttattagtttaaatcattgcgtgtctacactgagaaaattgaacccacataaagtggtggaacatactttgatttcatccaataaaagagtg 50539166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 528 - 629
Target Start/End: Complemental strand, 11135883 - 11135781
Alignment:
Q  528 actcactctcttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 626  Q
    ||||||||| ||||||| | |||||| ||| ||| |||||||||| |||| |||| |  | |||||||| |||||||||||||||| | | ||||||| |    
T  11135883 actcactcttttattgggtgaaatcaatgtaggacctacactttggaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaata 11135784  T
Q  627 gtg 629  Q
    |||    
T  11135783 gtg 11135781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 588 - 629
Target Start/End: Complemental strand, 15660976 - 15660935
Alignment:
Q  588 aaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    |||||||| |||||| ||||||||||||| ||||||||||||    
T  15660976 aaagtggtgggacatgcattgattttatccaataaaagagtg 15660935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 530 - 603
Target Start/End: Complemental strand, 27570366 - 27570293
Alignment:
Q  530 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacata 603  Q
    ||||| ||||||| ||| |||||||||||| | |||||||| |||||| |||||  ||||| |||| |||||||    
T  27570366 tcactttcttattagttcaaatcattgtgggtttacactttaaaaattaaactcacacaaattggtgggacata 27570293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 508 - 557
Target Start/End: Original strand, 33113990 - 33114039
Alignment:
Q  508 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgt 557  Q
    ||||||| | ||||||||| ||||||| ||||||| ||||||||||||||    
T  33113990 ttttaaatactttctttaatactcactttcttattagtttaaatcattgt 33114039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 528 - 581
Target Start/End: Original strand, 47644334 - 47644387
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaac 581  Q
    |||| ||||||||||| ||||||||||||||| | ||||| |||||||| ||||    
T  47644334 actcgctctcttattgatttaaatcattgtgggtttacacattgaaaatagaac 47644387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 2e-33; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 508 - 629
Target Start/End: Complemental strand, 44274397 - 44274276
Alignment:
Q  508 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 607  Q
    ||||||| ||| ||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |  |||||||||| |||||||||||    
T  44274397 ttttaaatattctctctaacactcactctgttattggtttaaatcattgtggatctacactttgaaagttgaacccacacaaagtggtgggacatacatt 44274298  T
Q  608 gattttatctaataaaagagtg 629  Q
    ||||||||| ||| ||||||||    
T  44274297 gattttatccaatgaaagagtg 44274276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 530 - 629
Target Start/End: Complemental strand, 9470222 - 9470123
Alignment:
Q  530 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| |  |||||||||| |||||||||||||||| ||| ||||||||||||    
T  9470222 tcactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccaaacaaagtggtgggacatacattgatttcatccaataaaagagtg 9470123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 528 - 671
Target Start/End: Original strand, 26767798 - 26767941
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||||||| |||||||||||||||||||||  |||||| |||||||||||||| || |||||||||| |||||||||||||||| ||| | |||||||     
T  26767798 actcactcttttattggtttaaatcattgtgagtctacaatttgaaaattgaaccctcacaaagtggtgggacatacattgatttcatccagtaaaaga- 26767896  T
Q  628 tgtaaatactagagag--tgttgaaaagtgagtgttgctagtattc 671  Q
     |||| | ||||||||  ||||||||||||||||||||||| ||||    
T  26767897 -gtaagtgctagagagaatgttgaaaagtgagtgttgctagcattc 26767941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 508 - 666
Target Start/End: Original strand, 6980137 - 6980295
Alignment:
Q  508 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 607  Q
    |||| |||| ||||| ||| ||||||||||||||| ||| |||||||||||| |||| ||||||||||||||||||  |||||||||| | |||||| ||    
T  6980137 ttttgaacactttctctaatactcactctcttattagttgaaatcattgtgggtctatactttgaaaattgaactcacacaaagtggtagaacatacctt 6980236  T
Q  608 gattttatctaataaaagagtgtaaatact--agagagtgttgaaaagtgagtgttgctag 666  Q
    ||||| ||| ||||||||||||  | | ||  ||||||||||||||||||| |||||||||    
T  6980237 gatttcatccaataaaagagtg--agtgctagagagagtgttgaaaagtgaatgttgctag 6980295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 528 - 671
Target Start/End: Complemental strand, 12989334 - 12989191
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    |||||||||||||||||||||||||||||||| ||||||||| | |||| |||  | ||||||||||| |||||||||||||||| ||| ||| ||||||    
T  12989334 actcactctcttattggtttaaatcattgtgggtctacacttcggaaatagaatccatacaaagtggtgggacatacattgatttcatccaatgaaagag 12989235  T
Q  628 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 671  Q
    ||        ||||||||||||||||||||||||||||| ||||    
T  12989234 tgagtgagaaagagagtgttgaaaagtgagtgttgctagcattc 12989191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 508 - 671
Target Start/End: Complemental strand, 45554722 - 45554567
Alignment:
Q  508 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 607  Q
    |||| |||||| ||| ||| ||||||| |||||||||||||||||||||||| ||||||||| ||||||||        ||||||||| |||||||||||    
T  45554722 ttttgaacattctctctaatactcactttcttattggtttaaatcattgtgggtctacacttggaaaattg--------caaagtggtgggacatacatt 45554631  T
Q  608 gattttatctaataaaagagtgtaaatact--agagagtgttgaaaagtgagtgttgctagtattc 671  Q
    ||||| ||| ||||||||||||  | | ||  ||||||||||||||||||||||||||||| ||||    
T  45554630 gatttcatccaataaaagagtg--agtgctagagagagtgttgaaaagtgagtgttgctagcattc 45554567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 508 - 624
Target Start/End: Original strand, 25238294 - 25238411
Alignment:
Q  508 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttaca-aagtggttggacatacat 606  Q
    ||||||||| ||||| ||  ||||||| | ||||||||||||||||||||||||||||||||||||||| |||| |  | | ||||| |  |||||||||    
T  25238294 ttttaaacactttctctagcactcacttttttattggtttaaatcattgtggatctacactttgaaaatagaacccacaaagaagtgatgagacatacat 25238393  T
Q  607 tgattttatctaataaaa 624  Q
    ||||||||||||||||||    
T  25238394 tgattttatctaataaaa 25238411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 516 - 665
Target Start/End: Original strand, 34142164 - 34142313
Alignment:
Q  516 attttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttat 615  Q
    ||||||||||| | ||||||||||||||||||||| |||||||  ||||||||||||||||||||| |  ||||||| ||  |||||||||  |||| ||    
T  34142164 attttctttaatattcactctcttattggtttaaaccattgtgactctacactttgaaaattgaacccacacaaagtagtgagacatacatgaatttcat 34142263  T
Q  616 ctaataaaagagtgtaaatactagagagtgttgaaaagtgagtgttgcta 665  Q
    | ||||||| |||| |  |   ||||| ||||||||||| ||||||||||    
T  34142264 ccaataaaaaagtgaatgtttgagagattgttgaaaagtaagtgttgcta 34142313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 532 - 603
Target Start/End: Original strand, 7919311 - 7919382
Alignment:
Q  532 actctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacata 603  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |  |||||||||| |||||||    
T  7919311 actctcttattggtttaaatcattgtggatctacactttgaaaattgaatccacacaaagtggtgggacata 7919382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 530 - 629
Target Start/End: Complemental strand, 19639234 - 19639135
Alignment:
Q  530 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    |||||||||||||||||||||||||||| | ||| |||||||||||||||||||  || | ||| |  ||||||||||||||| ||||||||||| ||||    
T  19639234 tcactctcttattggtttaaatcattgtaggtctgcactttgaaaattgaactcacactatgtgatgagacatacattgatttcatctaataaaatagtg 19639135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 530 - 629
Target Start/End: Complemental strand, 19837827 - 19837728
Alignment:
Q  530 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    |||||||||||||||||||||||||||| | ||| |||||||||||||||||||  || | ||| |  ||||||||||||||| ||||||||||| ||||    
T  19837827 tcactctcttattggtttaaatcattgtaggtctgcactttgaaaattgaactcacactatgtgatgagacatacattgatttcatctaataaaatagtg 19837728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 694 - 780
Target Start/End: Original strand, 2816572 - 2816656
Alignment:
Q  694 tggatctttgatctttcttggtccaagttttgcatattcaatgctttaagatttctaattattgtagtgctcatacagtgaagaaga 780  Q
    |||| ||||||||||| ||||||||||||||||||||||||| | || ||| |||||||||||||| ||||||||||||||||||||    
T  2816572 tggagctttgatctttgttggtccaagttttgcatattcaatac-ttgaga-ttctaattattgtaatgctcatacagtgaagaaga 2816656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 528 - 661
Target Start/End: Original strand, 35316438 - 35316569
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    |||||||||||||||| ||||||||||||||| |||||| ||| |||||||||     | ||| |||| ||||||||||| |||||||||||||||||||    
T  35316438 actcactctcttattgatttaaatcattgtgggtctacaatttaaaaattgaatcaacataaaatggtgggacatacattaattttatctaataaaagag 35316537  T
Q  628 tgtaaatactagagagtgttgaaaagtgagtgtt 661  Q
    ||  | || |||||| ||||||||| | ||||||    
T  35316538 tg--agtaatagagaatgttgaaaaataagtgtt 35316569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 561 - 661
Target Start/End: Complemental strand, 2476644 - 2476546
Alignment:
Q  561 tctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatactagagagtgttgaaaagtgagtgt 660  Q
    |||||| ||||||||||||| |   ||||||| || ||||||||||||||||||||||||||||||  |||| | ||||||| |||||||||||||||||    
T  2476644 tctacattttgaaaattgaagttacacaaagtagtgggacatacattgattttatctaataaaaga--gtaagtgctagagaatgttgaaaagtgagtgt 2476547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 528 - 629
Target Start/End: Complemental strand, 11539569 - 11539465
Alignment:
Q  528 actcactctcttattggtttaaatca-ttgtggatctacactttgaaaattgaactcttacaaagtggttggacatac--attgattttatctaataaaa 624  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||| ||||||  |||||||| | | ||||||  |||||||| ||| |||||||    
T  11539569 actcactctcttattggtttaaatcaattctggatctacactttgaaaatagaactcacacaaagtgatggaacatacatattgatttcatccaataaaa 11539470  T
Q  625 gagtg 629  Q
    |||||    
T  11539469 gagtg 11539465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 520 - 624
Target Start/End: Original strand, 12098895 - 12099000
Alignment:
Q  520 tctttaaaactcactctcttattggtttaaatcatt-gtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatcta 618  Q
    ||||||| ||||||||||||||| |||||||||||| |||  | ||||||||||||||||||||| ||||||||||   ||||||| ||||||| ||| |    
T  12098895 tctttaatactcactctcttattagtttaaatcatttgtgagtttacactttgaaaattgaactcatacaaagtggcgagacatactttgatttcatcaa 12098994  T
Q  619 ataaaa 624  Q
    ||||||    
T  12098995 ataaaa 12099000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 532 - 612
Target Start/End: Complemental strand, 38464302 - 38464222
Alignment:
Q  532 actctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattt 612  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |   ||||||| |  |||||||||||||||    
T  38464302 actctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccacgcaaagtgatgagacatacattgattt 38464222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 528 - 607
Target Start/End: Complemental strand, 10981661 - 10981582
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 607  Q
    |||||||||||||||||||||||||||||||| ||||||| ||| |||| |||| |  |||||||||| |||||||||||    
T  10981661 actcactctcttattggtttaaatcattgtgggtctacacattggaaatagaacccacacaaagtggtgggacatacatt 10981582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 537 - 671
Target Start/End: Original strand, 18511255 - 18511389
Alignment:
Q  537 cttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg-taaata 635  Q
    |||||||||||||| |||||| | ||| ||||||||||||||||| |  | ||| | || |||||||||||||||||||| ||||||||||||    |||    
T  18511255 cttattggtttaaaacattgtaggtcttcactttgaaaattgaacccacataaaatagtgggacatacattgattttatccaataaaagagtgagtgata 18511354  T
Q  636 ctagagagtgttgaaaagtgagtgttgctagtattc 671  Q
     | ||||||||| |||||||||||||||||| ||||    
T  18511355 gt-gagagtgttaaaaagtgagtgttgctagcattc 18511389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 520 - 592
Target Start/End: Original strand, 472192 - 472264
Alignment:
Q  520 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagt 592  Q
    ||||||| |||| ||||||||||||||||||||||||||||| || | ||||||||||||||||  |||||||    
T  472192 tctttaatactcgctctcttattggtttaaatcattgtggatatatattttgaaaattgaactcacacaaagt 472264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 508 - 666
Target Start/End: Original strand, 16719447 - 16719605
Alignment:
Q  508 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacatt 607  Q
    |||| |||||||| ||||| ||||| | |  |||||||||||||||||| || |||||| ||||||||||||||    |  || |||| ||| |||||||    
T  16719447 tttttaacattttgtttaatactcatttttgtattggtttaaatcattgcgggtctacattttgaaaattgaacctacatgaaatggtgggatatacatt 16719546  T
Q  608 gattttatctaataaaagagtgtaaatactagagagtgttgaaaagtgagtgttgctag 666  Q
    ||||| ||||||||||||||| |       ||| |||||||||||||||||||||||||    
T  16719547 gatttcatctaataaaagagtatgtgctaaagacagtgttgaaaagtgagtgttgctag 16719605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 522 - 624
Target Start/End: Complemental strand, 30849386 - 30849284
Alignment:
Q  522 tttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaata 621  Q
    ||||| || |||| |||||||| ||||||||||||||||| ||  |||| ||||| |||| | |||||| |||| |||| ||||||||||| ||||||||    
T  30849386 tttaatacgcactttcttattgatttaaatcattgtggatttatcctttaaaaatagaacccatacaaattggtgggacgtacattgatttcatctaata 30849287  T
Q  622 aaa 624  Q
    |||    
T  30849286 aaa 30849284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 538 - 628
Target Start/End: Complemental strand, 32701603 - 32701513
Alignment:
Q  538 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagt 628  Q
    |||||||||||||||||| ||||| ||||| || ||||||||||    | |||||||| ||| |||||||||||||||| |||||||||||    
T  32701603 ttattggtttaaatcattatggatttacacgttaaaaattgaacatacataaagtggtgggatatacattgattttatccaataaaagagt 32701513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 538 - 624
Target Start/End: Original strand, 37652292 - 37652378
Alignment:
Q  538 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaa 624  Q
    ||||||||||||||||||||| |||||||| ||| |||||||||    |||||| ||| | |||||||||||||| |||||||||||    
T  37652292 ttattggtttaaatcattgtgaatctacacgttggaaattgaacatacacaaaggggtggaacatacattgatttcatctaataaaa 37652378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 538 - 662
Target Start/End: Complemental strand, 17188198 - 17188076
Alignment:
Q  538 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatact 637  Q
    |||||||||||||||||| |||  ||||||||||||||||||  ||  ||||||||||  || | |||||||||| ||| ||||||| ||||  | |  |    
T  17188198 ttattggtttaaatcattctgggcctacactttgaaaattgagttcacacaaagtggtgagatacacattgatttcatccaataaaatagtg--agtgat 17188101  T
Q  638 agagagtgttgaaaagtgagtgttg 662  Q
    |||||| ||||||||||||||||||    
T  17188100 agagagagttgaaaagtgagtgttg 17188076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 528 - 671
Target Start/End: Original strand, 32856172 - 32856319
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||| |||||||||||||||||||| | ||||||||||||||||||||| ||| |  ||||||||||   ||||| ||| |||| |||  |||||||||    
T  32856172 actcaatctcttattggtttaaatcactatggatctacactttgaaaattcaacccacacaaagtggtgaaacatatattaatttcatccgataaaagag 32856271  T
Q  628 t--gtaaatact--agagagtgttgaaaagtgagtgttgctagtattc 671  Q
    |  ||   ||||  |||||||||| |||||||||||||| ||| ||||    
T  32856272 tcagtgcgtactggagagagtgttcaaaagtgagtgttgttagcattc 32856319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 528 - 661
Target Start/End: Original strand, 36471875 - 36472008
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||||||| |||||||||||||||||||||  | |||| |||||||||||||  | || ||||||||  ||||||| ||||||| ||| ||||| |||     
T  36471875 actcactcttttattggtttaaatcattgtgagtttacattttgaaaattgaatccataaaaagtggtgagacatactttgatttcatccaataagagat 36471974  T
Q  628 tgtaaatactagagagtgttgaaaagtgagtgtt 661  Q
    ||    |   ||||||||||||||||||||||||    
T  36471975 tgagtgtcagagagagtgttgaaaagtgagtgtt 36472008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 528 - 576
Target Start/End: Original strand, 4552877 - 4552925
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaat 576  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  4552877 actcactctcttattggtttaaatcattgtgggtctacacattgaaaat 4552925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 202 - 305
Target Start/End: Original strand, 25476329 - 25476432
Alignment:
Q  202 ggtttatgcggaaacaagaccccccaagatcaggagctctgatgccacgtgaaaactaaacattatatttcagagataaaaaatgcacaactactaatgt 301  Q
    ||||||||||||| |||| ||||    ||||  |||||||||||||| ||||||||| || ||||||||||| ||||||| |||  ||||| ||||||||    
T  25476329 ggtttatgcggaagcaaggcccctagtgatcgagagctctgatgccatgtgaaaactgaagattatatttcaaagataaataatttacaaccactaatgt 25476428  T
Q  302 gttt 305  Q
    ||||    
T  25476429 gttt 25476432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 516 - 578
Target Start/End: Original strand, 14489564 - 14489626
Alignment:
Q  516 attttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattg 578  Q
    ||||||| ||| ||||| ||| |||||||||||||| |||||||||||||||||| |||||||    
T  14489564 attttctctaatactcattcttttattggtttaaattattgtggatctacactttaaaaattg 14489626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 536 - 602
Target Start/End: Complemental strand, 15884564 - 15884498
Alignment:
Q  536 tcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacat 602  Q
    |||||||||||||||| ||||||| |||||| |||||||||||||| |  |||||||||| ||||||    
T  15884564 tcttattggtttaaataattgtgggtctacattttgaaaattgaacccacacaaagtggtgggacat 15884498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 237 - 310
Target Start/End: Complemental strand, 17508921 - 17508848
Alignment:
Q  237 gctctgatgccacgtgaaaactaaacattatatttcagagataaaaaatgcacaactactaatgtgtttatata 310  Q
    |||||||| ||| ||||||| | || ||||||||||||| ||||| |||| ||||| |||||||||||||||||    
T  17508921 gctctgataccatgtgaaaattgaatattatatttcagaaataaataatgtacaaccactaatgtgtttatata 17508848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 528 - 624
Target Start/End: Complemental strand, 43414498 - 43414402
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaa 624  Q
    |||||| ||||| |||||||||||||||||||||||| ||| ||||||| | |||    |||| |||| | |||||||||||||| ||| |||||||    
T  43414498 actcaccctcttcttggtttaaatcattgtggatctatactctgaaaatagcacttacgcaaaatggtagaacatacattgatttcatccaataaaa 43414402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 528 - 629
Target Start/End: Original strand, 28898073 - 28898175
Alignment:
Q  528 actcactctcttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 626  Q
    ||||||||| ||||||| | |||||| ||| |||||||||||||| ||||  ||| |  | |||||||| |||||||||||||||| | | |||||||||    
T  28898073 actcactcttttattggatgaaatcaatgtaggatctacactttggaaatgaaacccacataaagtggtgggacatacattgatttcacccaataaaaga 28898172  T
Q  627 gtg 629  Q
    |||    
T  28898173 gtg 28898175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 588 - 629
Target Start/End: Original strand, 41805873 - 41805914
Alignment:
Q  588 aaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    |||||||| |||||||||||||||||||| ||||||||||||    
T  41805873 aaagtggtgggacatacattgattttatccaataaaagagtg 41805914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 528 - 666
Target Start/End: Original strand, 24895303 - 24895440
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatc-tacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 626  Q
    ||||||||| | ||||| |||||||| ||||| || ||||||||| |||| ||||||  | ||| |||| | | |||||||||||||||| | |||||||    
T  24895303 actcactctttcattgggttaaatcaatgtgggtcatacactttggaaatggaactcacataaaatggtggaatatacattgattttatccattaaaaga 24895402  T
Q  627 gtgtaaatactagagagtgttgaaaagtgagtgttgctag 666  Q
    |||  | || |||||| |||  ||||| ||||||||||||    
T  24895403 gtg--agtattagagactgtccaaaagagagtgttgctag 24895440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 508 - 558
Target Start/End: Original strand, 25730456 - 25730506
Alignment:
Q  508 ttttaaacattttctttaaaactcactctcttattggtttaaatcattgtg 558  Q
    ||||||||||||| ||||| | ||||||| |||||||||||||||| ||||    
T  25730456 ttttaaacattttttttaatattcactcttttattggtttaaatcactgtg 25730506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 538 - 576
Target Start/End: Original strand, 30718374 - 30718412
Alignment:
Q  538 ttattggtttaaatcattgtggatctacactttgaaaat 576  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  30718374 ttattggtttaaatcattgtgagtctacactttgaaaat 30718412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 532 - 629
Target Start/End: Complemental strand, 42183029 - 42182931
Alignment:
Q  532 actctcttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    ||||| ||||||| | |||||| ||| ||| |||||||||| |||| |||| |  | |||||||| |||||||||||||||| | | ||||||||||||    
T  42183029 actcttttattgggtgaaatcaatgtaggacctacactttggaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaagagtg 42182931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 250 - 310
Target Start/End: Complemental strand, 38500282 - 38500219
Alignment:
Q  250 gtgaaaactaaacattatatttcaga---gataaaaaatgcacaactactaatgtgtttatata 310  Q
    ||||||||| || |||||||||||||   |||||| |||| ||||| |||||||||||||||||    
T  38500282 gtgaaaactgaatattatatttcagacgagataaataatgtacaaccactaatgtgtttatata 38500219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 1e-31; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 528 - 673
Target Start/End: Complemental strand, 46517434 - 46517291
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||| |||||||||||||||||||||||||  ||||||||||||||||||||| |  ||| | |||| ||| |||||||||||||||| |||||| |||    
T  46517434 actcattctcttattggtttaaatcattgtgagtctacactttgaaaattgaacccccacagaatggtgggatatacattgattttatccaataaatgag 46517335  T
Q  628 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattcat 673  Q
    ||  | | |||||||||||| |||||||||||||||||| ||||||    
T  46517334 tg--agtgctagagagtgttaaaaagtgagtgttgctagcattcat 46517291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 528 - 616
Target Start/End: Complemental strand, 27888425 - 27888337
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatc 616  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||| |  |||||||||| ||||||||||||||||||||    
T  27888425 actcactctcttattggtttaaatcattgtgggtctacactttaaaaattgaacccacacaaagtggtgggacatacattgattttatc 27888337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 531 - 671
Target Start/End: Original strand, 31502504 - 31502644
Alignment:
Q  531 cactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgt 630  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||| |  ||||| |||| |||||||| ||||||| ||| ||||||||||||     
T  31502504 cactctcttattggtttaaatcattgtgagtctacactttgaaaattgaacgcacacaaaatggtgggacataccttgatttcatccaataaaagagtga 31502603  T
Q  631 aaatactagagagtgttgaaaagtgagtgttgctagtattc 671  Q
       |   ||||| ||||||||||||||||||||||| ||||    
T  31502604 gtgttagagagactgttgaaaagtgagtgttgctagcattc 31502644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 528 - 671
Target Start/End: Complemental strand, 32205219 - 32205079
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||||||||||||| |||||||||||||| || ||| ||||| |||||||||| |  ||||| |||| |||||||||||||||| ||| ||||||||||    
T  32205219 actcactctcttattagtttaaatcattgtagacctatactttaaaaattgaacccacacaaaatggtaggacatacattgatttcatccaataaaagag 32205120  T
Q  628 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 671  Q
    ||  | ||  |||||||||| |||||||||||||||||| ||||    
T  32205119 tg--agta-gagagagtgttcaaaagtgagtgttgctagcattc 32205079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 528 - 671
Target Start/End: Complemental strand, 22190082 - 22189939
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||||||  ||||||||||||||||||| || ||||||||||||||||||||| |  |||||||||| || ||||||||||||| ||| ||||||||||    
T  22190082 actcactcgtttattggtttaaatcattgcgggtctacactttgaaaattgaacccacacaaagtggtgggccatacattgatttcatccaataaaagag 22189983  T
Q  628 tgtaaatact--agagagtgttgaaaagtgagtgttgctagtattc 671  Q
    ||  | | ||  ||||||||||||||| |||||||| |||| ||||    
T  22189982 tg--agtgctagagagagtgttgaaaaatgagtgtttctagcattc 22189939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 520 - 661
Target Start/End: Complemental strand, 7459494 - 7459353
Alignment:
Q  520 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaa 619  Q
    ||||||| ||||||||| |||||||||||||| |||||||||||| | |||||||||||| |||  | |||||||| | | |||||||||||||||| ||    
T  7459494 tctttaatactcactcttttattggtttaaattattgtggatctatattttgaaaattgagctcacataaagtggtggaatatacattgattttatcgaa 7459395  T
Q  620 taaaagagtgtaaatactagagagtgttgaaaagtgagtgtt 661  Q
    ||||||| ||   ||  |||||| |||| |||||||||||||    
T  7459394 taaaagaatgagtattatagagaatgttaaaaagtgagtgtt 7459353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 490 - 624
Target Start/End: Original strand, 25686838 - 25686968
Alignment:
Q  490 ttagcaacactctcttaattttaaacattttctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaa 589  Q
    ||||||||||||||||    || |||||| | | ||| ||||| | |||||||||||||||||||||||| ||||||||||||||||||||| | || ||    
T  25686838 ttagcaacactctctt----ttgaacattctttctaatactcattatcttattggtttaaatcattgtgggtctacactttgaaaattgaacccataaaa 25686933  T
Q  590 agtggttggacatacattgattttatctaataaaa 624  Q
    ||||||  ||||||||||||||| ||| |||||||    
T  25686934 agtggtatgacatacattgatttcatcaaataaaa 25686968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 523 - 671
Target Start/End: Complemental strand, 33008252 - 33008104
Alignment:
Q  523 ttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataa 622  Q
    |||| |||| |||| |||||||||||||||||||||| ||||||| ||| |||| |||| |  |||||||||| ||||||||| |||||| ||| |||||    
T  33008252 ttaatactctctcttttattggtttaaatcattgtgggtctacacattggaaatagaacccacacaaagtggtgggacatacaatgatttcatccaataa 33008153  T
Q  623 aagagtgtaaatactagag--agtgttgaaaagtgagtgttgctagtattc 671  Q
    |||||||  | | ||||||  |||||| |||||||||||||||||| ||||    
T  33008152 aagagtg--agtgctagagatagtgttcaaaagtgagtgttgctagcattc 33008104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 530 - 629
Target Start/End: Complemental strand, 7775140 - 7775042
Alignment:
Q  530 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    |||||| |||||| |||||||||||| ||| || ||||||||||||||||||||  |||||||||| |||||||||||||||| ||| ||||||||||||    
T  7775140 tcactcacttatttgtttaaatcattctgg-tccacactttgaaaattgaactcacacaaagtggtgggacatacattgatttcatccaataaaagagtg 7775042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 528 - 666
Target Start/End: Original strand, 12263473 - 12263611
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||| |    |||||||| | |||||||||||||||  |||  |||||||||    
T  12263473 actcactatcttattggtttaaatcattgtgggtctacactttgaaaattgatcctacacaaagtgatgggacatacattgattccatccgataaaagag 12263572  T
Q  628 tgta-aatactagagagtgttgaaaagtgagtgttgctag 666  Q
    || |  |||  ||||||||||||||||| |||||||||||    
T  12263573 tggatgata-gagagagtgttgaaaagtaagtgttgctag 12263611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 528 - 662
Target Start/End: Complemental strand, 27949416 - 27949282
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||  ||||| |||| |||||||  ||||||| ||| |||| |||||    
T  27949416 actcactctcttattagtttaaatcattgtgggtctacactttgaaatttgaactcacacaaaatggtaggacataacttgatttcatccaatacaagag 27949317  T
Q  628 tgtaaatactagagagtgttgaaaagtgagtgttg 662  Q
    ||    |   |||||||||| ||||||||||||||    
T  27949316 tgagtgttagagagagtgttaaaaagtgagtgttg 27949282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 520 - 612
Target Start/End: Complemental strand, 6442316 - 6442224
Alignment:
Q  520 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattt 612  Q
    ||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||  |  ||||| |||| | ||||||||||||||    
T  6442316 tctttaatactcactcttttattggtttaaatcattgtgggtctacactttgaaaattgaatccccacaaaatggtggaacatacattgattt 6442224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 528 - 671
Target Start/End: Complemental strand, 14795274 - 14795131
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||||||||||||| |||||||||||| ||||| |||||||| ||||||||||    | ||| |||| |||||||||||||||| ||| ||||||| ||    
T  14795274 actcactctcttattagtttaaatcattatggatatacactttaaaaattgaaccaacaaaaattggtgggacatacattgatttcatccaataaaaaag 14795175  T
Q  628 tg-taaatactagagagtgttgaaaagtgagtgttgctagtattc 671  Q
    ||    |||  ||||||||||||||||||||||||||||| ||||    
T  14795174 tgactgata-gagagagtgttgaaaagtgagtgttgctagcattc 14795131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 528 - 671
Target Start/End: Complemental strand, 15242266 - 15242123
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||||||||||||| |||||||||||| ||||| |||||||| ||||||||||    | ||| |||| |||||||||||||||| ||| ||||||| ||    
T  15242266 actcactctcttattagtttaaatcattatggatatacactttaaaaattgaaccaacaaaaattggtgggacatacattgatttcatccaataaaaaag 15242167  T
Q  628 tg-taaatactagagagtgttgaaaagtgagtgttgctagtattc 671  Q
    ||    |||  ||||||||||||||||||||||||||||| ||||    
T  15242166 tgactgata-gagagagtgttgaaaagtgagtgttgctagcattc 15242123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 528 - 626
Target Start/End: Original strand, 32212907 - 32213004
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 626  Q
    ||||||||||||||||||||||||||||||||  ||||| ||| |||||||||| | |||||||| ||  ||||||||||||||| ||| |||||||||    
T  32212907 actcactctcttattggtttaaatcattgtgg-gctacattttaaaaattgaacacatacaaagtagtgagacatacattgatttcatccaataaaaga 32213004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 528 - 629
Target Start/End: Complemental strand, 11692322 - 11692221
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    |||||||||| |||| |||||||||| ||||  | |||||||||||||||||||    |||||||||| |||||||||||||||| ||| ||||||||||    
T  11692322 actcactctcatattagtttaaatcactgtgagtttacactttgaaaattgaacctacacaaagtggtaggacatacattgatttcatccaataaaagag 11692223  T
Q  628 tg 629  Q
    ||    
T  11692222 tg 11692221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 528 - 629
Target Start/End: Complemental strand, 11824214 - 11824113
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||||| |||||||| ||||||||||||||| | ||||||||||||||||||     ||||| |||| |||||||||||||||| ||| ||||||||||    
T  11824214 actcactttcttattgatttaaatcattgtgggtttacactttgaaaattgaagctacacaaaatggtgggacatacattgatttcatccaataaaagag 11824115  T
Q  628 tg 629  Q
    ||    
T  11824114 tg 11824113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 528 - 671
Target Start/End: Original strand, 48374476 - 48374617
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    |||||||||||| ||||||||||| ||||||  | ||||||||| |||| |||| | || |||||||| |||||| |||  |||  ||  ||||||||||    
T  48374476 actcactctcttgttggtttaaattattgtgagtatacactttggaaatagaacccatagaaagtggtgggacatgcatgaattccattcaataaaagag 48374575  T
Q  628 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 671  Q
    ||  | |||||||||||||| |||||||||||||||||| ||||    
T  48374576 tg--agtactagagagtgttcaaaagtgagtgttgctagcattc 48374617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 532 - 615
Target Start/End: Original strand, 23564076 - 23564159
Alignment:
Q  532 actctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttat 615  Q
    ||||| |||||||||||||| |  ||||||||||||||||||||| |||||| |||||||||||  |||||||||| |||||||    
T  23564076 actcttttattggtttaaattacagtggatctacactttgaaaatagaactcatacaaagtggtgcgacatacattaattttat 23564159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 528 - 665
Target Start/End: Original strand, 19422871 - 19423008
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||| |      ||||| | ||| |||||||||||||||| ||| ||| ||||||    
T  19422871 actcactcttttattggtttaaatcattgtggatctacacttcgaaaatagtgacaatacaatggggtgggacatacattgatttcatccaatgaaagag 19422970  T
Q  628 tg-taaatactagagagtgttgaaaagtgagtgttgcta 665  Q
    ||    |||  ||||||||||||||||||||||||||||    
T  19422971 tgagtgata-gagagagtgttgaaaagtgagtgttgcta 19423008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 520 - 666
Target Start/End: Complemental strand, 39254234 - 39254088
Alignment:
Q  520 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaa 619  Q
    ||||||| |||||||||||||||| ||||||| ||||||| |||||| ||| ||||||||||    ||||||||||   ||||||||| |||||||  ||    
T  39254234 tctttaacactcactctcttattgatttaaattattgtgggtctacattttaaaaattgaaccaacacaaagtggtgaaacatacattaattttattcaa 39254135  T
Q  620 taaaagagtgtaaatactagagagtgttgaaaagtgagtgttgctag 666  Q
    ||||||||||       |||||| ||||||||||||| |||||||||    
T  39254134 taaaagagtgagtgctatagagaatgttgaaaagtgaatgttgctag 39254088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 530 - 656
Target Start/End: Original strand, 32178843 - 32178966
Alignment:
Q  530 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    |||||||||||||| ||||||||||||||  | |||||||||||||||||| |   ||| |||||| | ||||||||| |||| ||| ||||||| |  |    
T  32178843 tcactctcttattgatttaaatcattgtgtgtatacactttgaaaattgaa-taaaacagagtggtggaacatacattaatttcatccaataaaata--g 32178939  T
Q  630 taaatactagagagtgttgaaaagtga 656  Q
    ||| | |||||||||||||||||||||    
T  32178940 taagtgctagagagtgttgaaaagtga 32178966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 201 - 286
Target Start/End: Original strand, 39364335 - 39364420
Alignment:
Q  201 gggtttatgcggaaacaagaccccccaagatcaggagctctgatgccacgtgaaaactaaacattatatttcagagataaaaaatg 286  Q
    |||||||||||||| |||| |||| |||||||||||||||||||  || ||||||||| ||  |||||||||| ||||||| ||||    
T  39364335 gggtttatgcggaagcaaggcccctcaagatcaggagctctgatatcatgtgaaaactgaatgttatatttcaaagataaataatg 39364420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 528 - 629
Target Start/End: Original strand, 44350839 - 44350940
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||||||| || ||||||||||||||||||  |||||||||||||||||||||    ||||||||    ||||||||||||||| ||| ||||||| ||    
T  44350839 actcactcttttgttggtttaaatcattgtgagtctacactttgaaaattgaacctaaacaaagtgacgagacatacattgatttgatccaataaaaaag 44350938  T
Q  628 tg 629  Q
    ||    
T  44350939 tg 44350940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 522 - 626
Target Start/End: Original strand, 10933996 - 10934100
Alignment:
Q  522 tttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaata 621  Q
    ||||| ||||| ||||||||| |||||||||||||||| | || |||||| |||| |||  | |||||||||||  |||||| ||| |||||||| ||||    
T  10933996 tttaatactcaatctcttattagtttaaatcattgtgggtttatactttggaaatagaaaccatacaaagtggtgagacatatattaattttatccaata 10934095  T
Q  622 aaaga 626  Q
    |||||    
T  10934096 aaaga 10934100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 560 - 671
Target Start/End: Complemental strand, 12271096 - 12270988
Alignment:
Q  560 atctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatactagagagtgttgaaaagtgagtg 659  Q
    ||||||||||||||||| |||| |  |||||||||| |||||||||||||||| |||| ||||||||||| |     ||||||||||||||||||  |||    
T  12271096 atctacactttgaaaatagaac-cacacaaagtggtgggacatacattgatttcatctgataaaagagtggatgctatagagagtgttgaaaagt--gtg 12271000  T
Q  660 ttgctagtattc 671  Q
    ||||||| ||||    
T  12270999 ttgctagcattc 12270988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 538 - 662
Target Start/End: Original strand, 25092708 - 25092832
Alignment:
Q  538 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatact 637  Q
    |||||||||||||| ||||||  |||| |||| |||||||||||||  ||||||| || |||||||||||||||  ||| ||| ||||||||            
T  25092708 ttattggtttaaattattgtgtgtctatacttagaaaattgaactcacacaaagtagtaggacatacattgattgcatcaaatgaaagagtgggtgcgga 25092807  T
Q  638 agagagtgttgaaaagtgagtgttg 662  Q
    |||||||||||||||||||||||||    
T  25092808 agagagtgttgaaaagtgagtgttg 25092832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 528 - 629
Target Start/End: Original strand, 24539159 - 24539261
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatc-tacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 626  Q
    ||||||||||| ||||| |||||||| ||||| || |||| |||| |||| |||  | || |||||||| ||||||| |||||||||||| |||||||||    
T  24539159 actcactctctcattgggttaaatcaatgtgggtcatacattttggaaatggaatccatataaagtggtgggacatatattgattttatccaataaaaga 24539258  T
Q  627 gtg 629  Q
    |||    
T  24539259 gtg 24539261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 536 - 581
Target Start/End: Original strand, 36845567 - 36845612
Alignment:
Q  536 tcttattggtttaaatcattgtggatctacactttgaaaattgaac 581  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  36845567 tcttattggtttaaatcattgtgggtctatactttgaaaattgaac 36845612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 538 - 629
Target Start/End: Original strand, 19494385 - 19494477
Alignment:
Q  538 ttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    ||||||| | |||||| ||| ||||||||||||||||||| |||| |  | |||||||| |||||||||||||||| | | ||||||||||||    
T  19494385 ttattgggtgaaatcaatgtaggatctacactttgaaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaagagtg 19494477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 554 - 662
Target Start/End: Original strand, 44510999 - 44511107
Alignment:
Q  554 ttgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatact--agagagtgttgaaa 651  Q
    |||||||||||||| ||||||||||||| |  |||||||| |  ||||||||||||||| ||| ||||||| ||||  | | ||  ||||||||||||||    
T  44510999 ttgtggatctacacattgaaaattgaacacagacaaagtgatgagacatacattgatttcatccaataaaaaagtg--agtgctagagagagtgttgaaa 44511096  T
Q  652 agtgagtgttg 662  Q
    ||| |||||||    
T  44511097 agtaagtgttg 44511107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 528 - 629
Target Start/End: Complemental strand, 17749838 - 17749736
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatc-tacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 626  Q
    ||||||||||| ||||| |||||||| ||||| || |||| |||| ||||  ||  | || |||||||| ||||||| |||||||||||| |||||||||    
T  17749838 actcactctctcattgggttaaatcaatgtgggtcatacattttggaaatgaaatccatataaagtggtgggacatatattgattttatccaataaaaga 17749739  T
Q  627 gtg 629  Q
    |||    
T  17749738 gtg 17749736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 513 - 570
Target Start/End: Complemental strand, 1316431 - 1316374
Alignment:
Q  513 aacattttctttaaaactcactctcttattggtttaaatcattgtggatctacacttt 570  Q
    |||||||||| ||| ||||||||| ||||||||||||||||||||  || ||||||||    
T  1316431 aacattttctctaatactcactcttttattggtttaaatcattgtaaatgtacacttt 1316374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 528 - 581
Target Start/End: Original strand, 6580039 - 6580092
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaac 581  Q
    |||||||||||||||||||||||| ||||||| || | | ||||||||||||||    
T  6580039 actcactctcttattggtttaaattattgtgggtccatattttgaaaattgaac 6580092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 570 - 671
Target Start/End: Original strand, 8073367 - 8073468
Alignment:
Q  570 tgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatactag--agagtgttgaaaagtgagtgttgctagt 667  Q
    |||||||||||||   |||||||||| |||||||||||||||| |||  |||||||||||  | | ||||  ||| ||||||||| |||||||| |||||    
T  8073367 tgaaaattgaacttacacaaagtggtgggacatacattgatttcatccgataaaagagtg--agtgctaggaagaatgttgaaaaatgagtgttactagt 8073464  T
Q  668 attc 671  Q
    ||||    
T  8073465 attc 8073468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 536 - 613
Target Start/End: Complemental strand, 9649059 - 9648982
Alignment:
Q  536 tcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgatttt 613  Q
    |||||||||||||||||||||||| | ||||| ||| |||  |||| |  |||||||||| | |||||||||||||||    
T  9649059 tcttattggtttaaatcattgtgggtatacacattggaaacagaacccgcacaaagtggtggaacatacattgatttt 9648982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 530 - 566
Target Start/End: Original strand, 36845530 - 36845566
Alignment:
Q  530 tcactctcttattggtttaaatcattgtggatctaca 566  Q
    |||||||||||||||||||||||||||||| ||||||    
T  36845530 tcactctcttattggtttaaatcattgtgggtctaca 36845566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 520 - 559
Target Start/End: Complemental strand, 12167358 - 12167319
Alignment:
Q  520 tctttaaaactcactctcttattggtttaaatcattgtgg 559  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  12167358 tctttaatactcactttcttattggtttaaatcattgtgg 12167319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 528 - 626
Target Start/End: Original strand, 17354563 - 17354662
Alignment:
Q  528 actcactctcttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 626  Q
    ||||||| | ||||||| | |||||| ||| ||| |||||||||| |||| |||| |  | |||||||| |||||||||||||||| ||| |||||||||    
T  17354563 actcacttttttattgggtaaaatcaatgtaggacctacactttggaaatagaacccacataaagtggtgggacatacattgatttcatccaataaaaga 17354662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 528 - 606
Target Start/End: Complemental strand, 1688126 - 1688048
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacat 606  Q
    ||||||||| ||||||| ||||||| |||| | ||||||||||| ||||  ||||| | |||||||||  |||||||||    
T  1688126 actcactcttttattgggttaaatcgttgtaggtctacactttggaaataaaactcatgcaaagtggtgagacatacat 1688048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 528 - 629
Target Start/End: Original strand, 25428515 - 25428617
Alignment:
Q  528 actcactctcttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 626  Q
    ||||||||| ||||||| | |||||| ||| |||||||||||||| ||||  ||| |  | |||||||| |||||||||||||||| |   |||||||||    
T  25428515 actcactcttttattggataaaatcaatgtaggatctacactttggaaatgtaacccacataaagtggtgggacatacattgatttcacacaataaaaga 25428614  T
Q  627 gtg 629  Q
    |||    
T  25428615 gtg 25428617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 528 - 570
Target Start/End: Complemental strand, 31874159 - 31874117
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacacttt 570  Q
    |||||||||||||| ||||||||||||||||  ||||||||||    
T  31874159 actcactctcttataggtttaaatcattgtgagtctacacttt 31874117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 532 - 581
Target Start/End: Original strand, 3855851 - 3855900
Alignment:
Q  532 actctcttattggtttaaatcattgtggatctacactttgaaaattgaac 581  Q
    ||||| |||||||||||||||||||| | |||  ||||||||||||||||    
T  3855851 actcttttattggtttaaatcattgtaggtctgaactttgaaaattgaac 3855900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 528 - 612
Target Start/End: Complemental strand, 13919924 - 13919839
Alignment:
Q  528 actcactctcttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattt 612  Q
    ||||||||  ||||||| | |||||| ||| ||| ||||||||||||||| |||| |  | |||||||| ||||||||||||||||    
T  13919924 actcactcatttattgggtgaaatcaatgtaggacctacactttgaaaatggaacccacataaagtggtgggacatacattgattt 13919839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 2e-30; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 528 - 671
Target Start/End: Original strand, 10142013 - 10142154
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    |||||||||||||||| ||||||| ||||| | |||||||||||||||| ||||    |||||||||| |||||||||||||||||||| ||||||||||    
T  10142013 actcactctcttattgatttaaataattgttggtctacactttgaaaatggaaccaacacaaagtggtgggacatacattgattttatccaataaaagag 10142112  T
Q  628 tgtaaatactagagagtgttgaaaagtgagtgttgctagtattc 671  Q
    ||  | | ||| ||||||||||||| ||||||||||||| ||||    
T  10142113 tg--agtgctatagagtgttgaaaaatgagtgttgctagcattc 10142154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 528 - 671
Target Start/End: Original strand, 28490759 - 28490902
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    |||||||||||||||||||||||| ||||||| |||||||||| |||||||||||   |||||||||| |||||||| ||||||| ||| ||||||| ||    
T  28490759 actcactctcttattggtttaaattattgtgggtctacactttcaaaattgaacttacacaaagtggtgggacatactttgatttcatccaataaaaaag 28490858  T
Q  628 tgtaaatact--agagagtgttgaaaagtgagtgttgctagtattc 671  Q
    ||  ||| ||  ||||||| ||||||||||| ||||||||| ||||    
T  28490859 tg--aatgctagagagagttttgaaaagtgactgttgctagcattc 28490902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 529 - 622
Target Start/End: Complemental strand, 39246750 - 39246657
Alignment:
Q  529 ctcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataa 622  Q
    ||||||||||||||||||||||  ||||||| ||||||||||||||| |||||||  |||||||||| |||||||||||||||||||| |||||    
T  39246750 ctcactctcttattggtttaaagtattgtgggtctacactttgaaaactgaactcacacaaagtggtgggacatacattgattttatccaataa 39246657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 531 - 629
Target Start/End: Complemental strand, 34368500 - 34368402
Alignment:
Q  531 cactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||| |  |||||||||| | |||||||||| ||||||| ||| ||||||||    
T  34368500 cactctcttattggtttaaatcattgtgggtctacactttgaaaaatgaacccacacaaagtggtggaacatacattggttttatccaatgaaagagtg 34368402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 528 - 629
Target Start/End: Original strand, 5413774 - 5413875
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||||| | |||||||||||||||||| ||| ||||||||||| ||||||||| |  |||||||||| |||||||||||||||| ||| ||||||||||    
T  5413774 actcacttttttattggtttaaatcattatgggtctacactttgtaaattgaacccacacaaagtggtgggacatacattgatttcatccaataaaagag 5413873  T
Q  628 tg 629  Q
    ||    
T  5413874 tg 5413875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 520 - 629
Target Start/End: Original strand, 25710501 - 25710610
Alignment:
Q  520 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaa 619  Q
    ||||||| | ||| |||||||||||||||||| ||||||| |||||||||||||||| |||||| ||| ||||||| |||||||||||||||| |   ||    
T  25710501 tctttaatattcattctcttattggtttaaattattgtgggtctacactttgaaaatagaactcatacgaagtggtaggacatacattgatttcacacaa 25710600  T
Q  620 taaaagagtg 629  Q
    ||||||||||    
T  25710601 taaaagagtg 25710610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 530 - 665
Target Start/End: Original strand, 28090268 - 28090401
Alignment:
Q  530 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    ||||||| |||||||||||||||||||| |||||| ||||||||||||||||||  |||||||||| ||||||  |||||||| || ||||| || |  |    
T  28090268 tcactcttttattggtttaaatcattgttgatctaaactttgaaaattgaactcacacaaagtggtgggacatgaattgatttcatataatataata--g 28090365  T
Q  630 taaatactagagagtgttgaaaagtgagtgttgcta 665  Q
    ||| |  |||||||||||||||| | ||||||||||    
T  28090366 taagtgatagagagtgttgaaaaataagtgttgcta 28090401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 530 - 629
Target Start/End: Original strand, 17537141 - 17537240
Alignment:
Q  530 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||    | ||| |||| |||||||||||||||| ||| ||||||||||||    
T  17537141 tcactctcttattggtttaaatcattatggatctacactttgaaaattaaaccaacaaaaattggtgggacatacattgatttgatcaaataaaagagtg 17537240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 536 - 629
Target Start/End: Original strand, 41330438 - 41330531
Alignment:
Q  536 tcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    |||||||||||||||||||||||  |||||||||||||||||||||    |||||||| | ||||||||||| |||| ||||||||||||||||    
T  41330438 tcttattggtttaaatcattgtgagtctacactttgaaaattgaacctacacaaagtgatgggacatacattaatttcatctaataaaagagtg 41330531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 530 - 629
Target Start/End: Complemental strand, 43405534 - 43405435
Alignment:
Q  530 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    |||||||||||||| ||||||||||||||| ||||||||||| |||| ||||   |||||||||||  ||||||||||||||| ||  ||||||||||||    
T  43405534 tcactctcttattgatttaaatcattgtgggtctacactttggaaatagaacatatacaaagtggtgagacatacattgatttcattcaataaaagagtg 43405435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 531 - 629
Target Start/End: Original strand, 27592492 - 27592590
Alignment:
Q  531 cactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    ||||||||||||||||||||||||||  ||||||||||||| |||| ||||||  | ||||||||  ||||||||||||||| ||| ||||||| ||||    
T  27592492 cactctcttattggtttaaatcattgcagatctacactttggaaatagaactcgcataaagtggtgagacatacattgatttcatccaataaaatagtg 27592590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 528 - 630
Target Start/End: Complemental strand, 37455491 - 37455390
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    |||||||||||||||||||||| | ||||||  ||||||||||||||||||||| |  ||||| |||| | |||||||||||||||||| |||||| |||    
T  37455491 actcactctcttattggtttaatt-attgtgagtctacactttgaaaattgaacccccacaaaatggtggaacatacattgattttatcgaataaatgag 37455393  T
Q  628 tgt 630  Q
    |||    
T  37455392 tgt 37455390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 528 - 629
Target Start/End: Original strand, 30325911 - 30326012
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||||| ||||||||||||||||||||| |||||||||||||| | || ||||||  | ||||||||  ||||||||||||||| ||| ||||||| ||    
T  30325911 actcactttcttattggtttaaatcattgcggatctacactttggagatagaactcgcataaagtggtgagacatacattgatttcatccaataaaatag 30326010  T
Q  628 tg 629  Q
    ||    
T  30326011 tg 30326012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 536 - 626
Target Start/End: Original strand, 28434863 - 28434951
Alignment:
Q  536 tcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 626  Q
    |||||||||||||||||||||||| |||| |||||||||||||||  |  ||| |||||| ||||||| |||||||||||| |||||||||    
T  28434863 tcttattggtttaaatcattgtgggtctaaactttgaaaattgaa--ccaacacagtggtgggacatatattgattttatccaataaaaga 28434951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 528 - 628
Target Start/End: Original strand, 41105607 - 41105707
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    |||| ||||||||||||||||||||| ||||| | | ||||||||||||||||| |  ||||||| || |||||| | ||||||| ||| ||||||||||    
T  41105607 actcgctctcttattggtttaaatcactgtgggtatgcactttgaaaattgaacccacacaaagtagtgggacatcccttgatttcatccaataaaagag 41105706  T
Q  628 t 628  Q
    |    
T  41105707 t 41105707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 532 - 671
Target Start/End: Original strand, 28611819 - 28611958
Alignment:
Q  532 actctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgta 631  Q
    ||||| |||||| ||||||||||||||  |||||||||| ||||| |||||| ||||||||| | ||||||||| || || |||| ||| |||||||| |    
T  28611819 actcttttattgatttaaatcattgtgcgtctacactttaaaaatggaactcatacaaagtgatgggacatacactggttatatccaatgaaagagtgaa 28611918  T
Q  632 aatactagagagtgttgaaaagtgagtgttgctagtattc 671  Q
      |   |||||||| | |||||||||||||| ||| ||||    
T  28611919 tgttagagagagtgctcaaaagtgagtgttgttagcattc 28611958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 520 - 626
Target Start/End: Original strand, 34384720 - 34384826
Alignment:
Q  520 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaa 619  Q
    ||||||| ||||||||| |||| ||| ||||||||||||  |||| | ||||||||||||||||  ||||| | || |||||||||||||||| | | ||    
T  34384720 tctttaatactcactcttttatcggtctaaatcattgtgagtctataatttgaaaattgaactcacacaaaatagtgggacatacattgatttcacccaa 34384819  T
Q  620 taaaaga 626  Q
    |||||||    
T  34384820 taaaaga 34384826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 165 - 312
Target Start/End: Original strand, 1678916 - 1679066
Alignment:
Q  165 cgaaaaaagcaaaagtaattgcaaggactgcaactagggtttatgcggaaacaagaccccccaagatcaggagctctgatgccacgtgaaaactaaacat 264  Q
    ||||||||||||||||||  |||| | | ||  ||| |||||||| |||| |||| ||||| |||||||  ||||  ||||||| ||||||||  |  ||    
T  1678916 cgaaaaaagcaaaagtaaacgcaaaggcggcggctaaggtttatgtggaagcaaggccccctaagatcaaaagcttcgatgccatgtgaaaacatactat 1679015  T
Q  265 tatatttcagagat---aaaaaatgcacaactactaatgtgtttatatata 312  Q
    ||||||||||||||   |||||||| ||||| |||||| ||||||||||||    
T  1679016 tatatttcagagataaaaaaaaatgtacaaccactaatatgtttatatata 1679066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 536 - 624
Target Start/End: Original strand, 1923597 - 1923685
Alignment:
Q  536 tcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaa 624  Q
    ||||||||||||||||||||||  | ||||||||| ||||||||||||  ||||||||||  ||||||||||  ||  |||||||||||    
T  1923597 tcttattggtttaaatcattgtaaaactacactttaaaaattgaactcacacaaagtggtgtgacatacattctttgcatctaataaaa 1923685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 530 - 666
Target Start/End: Complemental strand, 25630948 - 25630812
Alignment:
Q  530 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    ||||| ||| ||||||||||||||| |||| |||||||||||||||||||||   |||||| | || ||| ||||||| |||||||  ||||||| |||     
T  25630948 tcactttctaattggtttaaatcatcgtgggtctacactttgaaaattgaacctatacaaaatagtgggatatacattaattttattaaataaaatagta 25630849  T
Q  630 taaatactagagagtgttgaaaagtgagtgttgctag 666  Q
     |  |   ||||||||||||||||| ||| |||||||    
T  25630848 aatgttaaagagagtgttgaaaagtaagtattgctag 25630812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 538 - 581
Target Start/End: Original strand, 31885878 - 31885921
Alignment:
Q  538 ttattggtttaaatcattgtggatctacactttgaaaattgaac 581  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  31885878 ttattggtttaaatcattgtagatctacactttgaaaattgaac 31885921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 520 - 622
Target Start/End: Original strand, 10666717 - 10666819
Alignment:
Q  520 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaa 619  Q
    ||||||| | |||||||||||||||||||||| | ||||  |||||| ||| ||||| |||| |  | |||||||| ||| ||||| |||||||||||||    
T  10666717 tctttaacattcactctcttattggtttaaattaatgtgagtctacaatttaaaaatggaacccacataaagtggtaggatatacaatgattttatctaa 10666816  T
Q  620 taa 622  Q
    |||    
T  10666817 taa 10666819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 530 - 663
Target Start/End: Original strand, 17434888 - 17435019
Alignment:
Q  530 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    ||||||| |||||||||||||||| ||||| ||||||||||  |||| |||||| |||||| | || | ||||| |||  ||| ||| |||||||| | |    
T  17434888 tcactcttttattggtttaaatcaatgtgggtctacactttagaaatagaactcatacaaaatagtagaacatatatttgtttaatccaataaaagtgag 17434987  T
Q  630 taaatactagagagtgttgaaaagtgagtgttgc 663  Q
    |||  |  ||||||||||||||||| ||||||||    
T  17434988 taataa--agagagtgttgaaaagtaagtgttgc 17435019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 535 - 628
Target Start/End: Original strand, 28155746 - 28155837
Alignment:
Q  535 ctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagt 628  Q
    ||||||||||| |||| |||||||  ||||||||||||||||| ||| | || ||| |||||| |||||||||||||| ||  |||||||||||    
T  28155746 ctcttattggtataaaacattgtg--tctacactttgaaaattaaacccataaaaaatggttgaacatacattgatttcattcaataaaagagt 28155837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 528 - 629
Target Start/End: Original strand, 42224627 - 42224729
Alignment:
Q  528 actcactctcttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 626  Q
    ||||||||| ||||||| | |||||| ||| ||| |||||||||| |||| |||| |  | |||||||| |||||||||||||||| | |||||||||||    
T  42224627 actcactcttttattgggtgaaatcaatgtaggacctacactttggaaatggaacccacataaagtggtgggacatacattgatttcacctaataaaaga 42224726  T
Q  627 gtg 629  Q
    |||    
T  42224727 gtg 42224729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 528 - 579
Target Start/End: Original strand, 28223813 - 28223864
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattga 579  Q
    ||||||||| |||||||||||||||||| ||| |||| ||||||||||||||    
T  28223813 actcactcttttattggtttaaatcattatgggtctatactttgaaaattga 28223864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 538 - 581
Target Start/End: Original strand, 36337937 - 36337980
Alignment:
Q  538 ttattggtttaaatcattgtggatctacactttgaaaattgaac 581  Q
    |||||||||||||||||||||| ||||||||||| |||||||||    
T  36337937 ttattggtttaaatcattgtgggtctacactttggaaattgaac 36337980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 534 - 612
Target Start/End: Complemental strand, 10950223 - 10950145
Alignment:
Q  534 tctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattt 612  Q
    ||||||||| |||||||||||| ||  |||| ||||||||||| |||  | |||||| |||| ||||||||||||||||    
T  10950223 tctcttattagtttaaatcattatgagtctatactttgaaaatagaatccatacaaaatggtgggacatacattgattt 10950145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 538 - 612
Target Start/End: Complemental strand, 25919344 - 25919270
Alignment:
Q  538 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattt 612  Q
    |||||||||||||||||||||  ||||||||||||||||||| | |  ||||| ||||  |||||| ||||||||    
T  25919344 ttattggtttaaatcattgtgagtctacactttgaaaattgatcccacacaaaatggtgagacatatattgattt 25919270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 528 - 581
Target Start/End: Complemental strand, 14553655 - 14553602
Alignment:
Q  528 actcactctcttattggtttaaatcattgtggatctacactttgaaaattgaac 581  Q
    |||||||||||| ||||||||| | ||||||| |||||||||| ||||||||||    
T  14553655 actcactctcttgttggtttaatttattgtgggtctacactttaaaaattgaac 14553602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 627
Target Start/End: Complemental strand, 43541956 - 43541895
Alignment:
Q  566 actttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagag 627  Q
    ||||||||||||||||||  |||||||| |  ||||||||||||||||||  ||||||||||    
T  43541956 actttgaaaattgaactcacacaaagtgatgagacatacattgattttattcaataaaagag 43541895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 528 - 627
Target Start/End: Complemental strand, 24915199 - 24915099
Alignment:
Q  528 actcactctcttattggtttaaatcattgt-ggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaaga 626  Q
    ||||||||| ||||||| | |||||| ||| |||  |||||||||||||| |||| |  | |||||||| ||||||| |||||||| | |||||||||||    
T  24915199 actcactcttttattgggtgaaatcaatgtaggacatacactttgaaaatggaacccacataaagtggtgggacatatattgatttcacctaataaaaga 24915100  T
Q  627 g 627  Q
    |    
T  24915099 g 24915099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 530 - 624
Target Start/End: Complemental strand, 2525715 - 2525621
Alignment:
Q  530 tcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaa 624  Q
    |||||||||||||  ||||||||||| || || |||||||||||||  ||| ||  ||||||||||   | |||||||||||| ||| |||||||    
T  2525715 tcactctcttattaatttaaatcattatgtatttacactttgaaaacagaaatcacacaaagtggtgatagatacattgatttcatccaataaaa 2525621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 538 - 592
Target Start/End: Complemental strand, 4427375 - 4427321
Alignment:
Q  538 ttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagt 592  Q
    ||||| |||||||||||||||  ||||||||||||||||| || || ||||||||    
T  4427375 ttatttgtttaaatcattgtgagtctacactttgaaaattaaattcatacaaagt 4427321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 520 - 625
Target Start/End: Complemental strand, 27963 - 27858
Alignment:
Q  520 tctttaaaactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaa 619  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||| |||| |  |||||||||| |||||||||||||||  ||| ||    
T  27963 tctttaatactcactctcttattggtttaaatcattgtgggtctacactttggaaatagaacccacacaaagtggtgggacatacattgattccatccaa 27864  T
Q  620 taaaag 625  Q
    ||||||    
T  27863 taaaag 27858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 531 - 629
Target Start/End: Original strand, 26902 - 27000
Alignment:
Q  531 cactctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    |||||| ||||||||||||| |||| ||| ||||| ||||||||||||||| |  |||||||||| | ||||||||||||||  || ||||| ||||||    
T  26902 cactcttttattggtttaaagcattatgggtctacgctttgaaaattgaacccacacaaagtggtggaacatacattgatttattccaataagagagtg 27000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 534 - 629
Target Start/End: Complemental strand, 9801 - 9706
Alignment:
Q  534 tctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    ||||||||| |||||||| ||||||  |||||||||| |||||||||| |  ||||| |||| ||| |||||||||||| ||| ||||||| ||||    
T  9801 tctcttattcgtttaaattattgtgagtctacacttttaaaattgaacccacacaaaatggtgggatatacattgatttcatccaataaaaaagtg 9706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 534 - 629
Target Start/End: Complemental strand, 11347 - 11252
Alignment:
Q  534 tctcttattggtttaaatcattgtggatctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 629  Q
    ||||||||| |||||||| ||||||  |||||||||| |||||||||| |  ||||| |||| ||| |||||||||||| ||| ||||||| ||||    
T  11347 tctcttattcgtttaaattattgtgagtctacacttttaaaattgaacccacacaaaatggtgggatatacattgatttcatccaataaaaaagtg 11252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0245 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0245
Description:

Target: scaffold0245; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 263 - 310
Target Start/End: Original strand, 12452 - 12499
Alignment:
Q  263 attatatttcagagataaaaaatgcacaactactaatgtgtttatata 310  Q
    ||||||||||||||||||| |||| ||||| |||||||||||||||||    
T  12452 attatatttcagagataaataatgtacaaccactaatgtgtttatata 12499  T

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Target: scaffold0118 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 251 - 310
Target Start/End: Complemental strand, 18995 - 18936
Alignment:
Q  251 tgaaaactaaacattatatttcagagataaaaaatgcacaactactaatgtgtttatata 310  Q
    ||||||||||| ||||||||| ||||||||| |||| ||||| | |||||||||||||||    
T  18995 tgaaaactaaatattatattttagagataaataatgtacaaccattaatgtgtttatata 18936  T

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