View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12753_low_4 (Length: 391)
Name: NF12753_low_4
Description: NF12753
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12753_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 17 - 377
Target Start/End: Original strand, 33543238 - 33543598
Alignment:
| Q |
17 |
gtttcctgtgaaataatgaatttcatagtgttgagttataatgcttgaattcagttgattcttgcgaaaaaattatgtttgtttaaggtaacataacttc |
116 |
Q |
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| T |
33543238 |
gtttcctgtgaaataatgaatttcatagtgttgagttataatgcttgaattcagttgattcttgcgaaaaaattatgtttgtttaaggtaacataacttc |
33543337 |
T |
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| Q |
117 |
ttgtaattgcagggtttctgcttgtgtttcaaggcttcaattttgagagaactccaatgcttttgtagaatataatnnnnnnnnnnnnnnnnnnnnctat |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||| |
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| T |
33543338 |
ttgtaattgcagggtttctgcttgtgtttcaaggcttcaattttgagagaactccaatgcttctttagaatataataacaaaacaaaacaaaaacactat |
33543437 |
T |
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| Q |
217 |
ggtatctgtgttttttgttttggttactattttactttctataaatcattcagaacagcttcaatcctcacacactcaaaccctcctaagaattcaacaa |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33543438 |
ggtatctgtgttttttgttttggttactattttactttctataaatcattcagaacagcttcaatcctcacacactcaaaccctcctaagaattcaacaa |
33543537 |
T |
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| Q |
317 |
caattgaattttccttcagctttaagcaattggaataactccacagatttttgcaacacag |
377 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33543538 |
caattgaattttccttcagctttaagcaattggaataactccacagatttttgcaacacag |
33543598 |
T |
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