View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12756_low_8 (Length: 273)
Name: NF12756_low_8
Description: NF12756
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12756_low_8 |
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Alignment Details
Target: chr4 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 11 - 257
Target Start/End: Complemental strand, 46275168 - 46274922
Alignment:
| Q |
11 |
cacagagataccctaaaaccatgaacaaccagaaaccaaccatccccatatatcaaaagccattagagtgaaagtgtggtttgttgtttttggagagata |
110 |
Q |
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| T |
46275168 |
cacacagataccctaaaaccatgaacaaccagaaaccaaccatccccgtatatcaaaagccattagagtgaaagtgtggtttgttgtttttggagagata |
46275069 |
T |
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| Q |
111 |
aatatttgtgggttctactcctacacatatattcctaacaactgtcaacatctgtcattaaaacaaaacctagaaaatcacccatatgaagaaaatgaaa |
210 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46275068 |
aatatttgtgggttctactcctccacatatattcctaacaactgtcaacatctgtcattaaaacaaaacctagaaaatcacccatatgaagaaaatgaaa |
46274969 |
T |
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| Q |
211 |
accagatctcagatctaaacagttggaaacatccttaatttggaaac |
257 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46274968 |
accagatctcagatctaaacagttggaaacatccttaatttggaaac |
46274922 |
T |
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