View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12756_low_9 (Length: 258)
Name: NF12756_low_9
Description: NF12756
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12756_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 18 - 250
Target Start/End: Complemental strand, 40622784 - 40622552
Alignment:
| Q |
18 |
aggaatcaagactaagttactaaccctaccttattatgaagatgaaattgtggatttgtaaggacaaatgtgtggataatgtgtattgaaagttgaagct |
117 |
Q |
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| T |
40622784 |
aggaatcaagactaagttactaaccctaccttattatgaagatgaaattgtggatttgtaaggacaaatgtgtggataatgtgtattgaaagttgaagct |
40622685 |
T |
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| Q |
118 |
aaaacttggggaggaaaaagagagaagaagatgaatgaaactgaaaaagggtgtgttgtgtttaactagttcaaccaagtaatataataataatttagaa |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40622684 |
aaaacttggggaggaaaaagagagaagaagatgaatgaaactgaaaaagggtgtgttgtgtttaactagttcaaccaagtaatataataataatttagaa |
40622585 |
T |
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| Q |
218 |
tttcttttttactaaaaatagagggttcatctc |
250 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
40622584 |
tttcttttttactaaaaatagagggttcatctc |
40622552 |
T |
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