View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12757_low_11 (Length: 332)
Name: NF12757_low_11
Description: NF12757
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12757_low_11 |
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Alignment Details
Target: chr2 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 18 - 314
Target Start/End: Original strand, 10587279 - 10587575
Alignment:
| Q |
18 |
taaaaaacttctacagatgcattcaatcgcatctccttgcatatgtatctgtagagatattttaggaactaatatagcaaaatgacataataatgaaaca |
117 |
Q |
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| T |
10587279 |
taaaaaacttctacacatgcattcaatcgcatctccttgcatatgtatctgtagagatattttaggaactaatatagcaaaatgacataataatgaaaca |
10587378 |
T |
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| Q |
118 |
tgattggatatttacactgatagtgtatacaaattaaattcaattaatccaatgcacagataaggaaagtatgtagaaatcacatactcaggaagctgat |
217 |
Q |
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| T |
10587379 |
tgattggatatttacactgatagtgtatacaaattaaattcaattaatccagtgcacagataaggaaagtatgtagaaatcacatactcaggaagctgat |
10587478 |
T |
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| Q |
218 |
cctccccagaaataattaggtatgcaatggcaagaaatgcaattgcaagaactggagcactgagaatcagtaaaatgcttcctgcacaacatacaag |
314 |
Q |
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| T |
10587479 |
cctccccagaaataattaggtatgcaatggcaagaaatgcaattgcaagaacaggagcactgagaatcagtaaaatgcttcctgcacaacacacaag |
10587575 |
T |
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