View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12759_high_4 (Length: 295)
Name: NF12759_high_4
Description: NF12759
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12759_high_4 |
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Alignment Details
Target: chr6 (Bit Score: 147; Significance: 2e-77; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 87 - 233
Target Start/End: Complemental strand, 3151292 - 3151146
Alignment:
| Q |
87 |
ctgcttctcctcaagtttgttgtgaccaaagatagccaatctctcctcagcagcctttgttgtgagtccatttgaatcacacctcaaagtttgaaacact |
186 |
Q |
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| T |
3151292 |
ctgcttctcctcaagtttgttgtgaccaaagatagccaatctctcctcagcagcctttgttgtgagtccatttgaatcacacctcaaagtttgaaacact |
3151193 |
T |
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| Q |
187 |
tcctcaattggcacattttcctgcaaagaaattcaagtaatcttaac |
233 |
Q |
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| T |
3151192 |
tcctcaattggcacattttcctgcaaagaaattcaagtaatcttaac |
3151146 |
T |
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