View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12759_low_14 (Length: 249)
Name: NF12759_low_14
Description: NF12759
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12759_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 41473903 - 41474145
Alignment:
| Q |
1 |
aactatcacatcatcgcctggttaaaagaattgcaatnnnnnnn-tctattccgtttttgtatcctttttcatatttgtctttcttatgtgttgaaataa |
99 |
Q |
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| T |
41473903 |
aactatcacatcatcgcctggttaaaagaattgcaataaaaaaaatctattctgtttttgtatcctttttcatatctgtctttcttatgtgttgaaataa |
41474002 |
T |
|
| Q |
100 |
tttcttcatactcttccctttgtttcaaaatttgtaactatttgtaaacactctggtatccccttcattttaatttcaccaggtgtacaacttgcttaat |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41474003 |
tttcttcatactcttccctttgtttcaaaatttgtaactatttgtaaacactctggtatccccttcattttaatttcaccaggtgtacaacttgcttaat |
41474102 |
T |
|
| Q |
200 |
ttcaccgtagtatattttgtatatacttattttgtctctgctt |
242 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
41474103 |
ttcaccgtagtatattttgtatatacttattttgtctgtgctt |
41474145 |
T |
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