View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1275_high_10 (Length: 251)
Name: NF1275_high_10
Description: NF1275
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1275_high_10 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 6 - 251
Target Start/End: Original strand, 30834085 - 30834330
Alignment:
| Q |
6 |
agtagcataggaatcgttttcaaaccaattgcagtgattcagcttcttaatccaaacattgccacgagctaaacttgtcagattaattgagacacgtcaa |
105 |
Q |
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| T |
30834085 |
agtagcctaggaatcgttttcaaaccaattgcagtgattcagcttcttaatccaaacattgccacgagctaaacttgtcagattaattgagacacgtcaa |
30834184 |
T |
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| Q |
106 |
agcttagaagaaggaatgttttgttattacactggagttctctggaacacaccatattacctagtttattggttcatcatttcgtgttattcatattcct |
205 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
30834185 |
agcttagaagaaggaatgttttgttattacactggagttctctggaacacaccatattacctagtttattggttcatcatttcgtattattcatattcct |
30834284 |
T |
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| Q |
206 |
tccctatcaccattctttccatttatttccactcaacgtacccatc |
251 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
30834285 |
tccctatcaccattccttccatttatttccactcaacgtacccatc |
30834330 |
T |
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