View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1275_high_11 (Length: 251)
Name: NF1275_high_11
Description: NF1275
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1275_high_11 |
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Alignment Details
Target: chr3 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 35212797 - 35213037
Alignment:
| Q |
1 |
agcaatcacttccccagttcttgggtcataagcaggaaaagtttttcctattcaccaataataaattgtcacaactacactccactatgtataacattag |
100 |
Q |
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| T |
35212797 |
agcaatcacttccccagttcttgggtcataagcaggaaaagtttttcctattcaccaataataaattgtcacaactacactccactatgcataacattag |
35212896 |
T |
|
| Q |
101 |
aggtattagtatactattaaatcacatgaacctgatgcagcatccacaaatttcccattaatgagattctttgtgtatcttatttccacagatggtgtga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35212897 |
aggtattagtatactattaaatcacatgaacctgatgcagcatccataaatttcccattaatgagattctttgtgtatcttatttccacagatggtgtga |
35212996 |
T |
|
| Q |
201 |
ttaattcatcaacttcagcagcagtgctcaacttgcctatg |
241 |
Q |
| |
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|||||||||||||||||||||||||||||||||||| |||| |
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| T |
35212997 |
ttaattcatcaacttcagcagcagtgctcaacttgcttatg |
35213037 |
T |
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