View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1275_low_21 (Length: 331)
Name: NF1275_low_21
Description: NF1275
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1275_low_21 |
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Alignment Details
Target: chr2 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 46 - 302
Target Start/End: Original strand, 36864062 - 36864318
Alignment:
| Q |
46 |
atatacttgtgatcttaacaaacaatgtagatttcacctaaaccaaatatattttttaacgtcacagtcgatgcaaaatctgtaacaacaaacaagaaag |
145 |
Q |
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| T |
36864062 |
atatactcgagatcttaacaaacaatgtagatttcacctaaaccaaatatattttttaacgtcacagtcgatgcaaaatctgtaacaacaaagaagaaag |
36864161 |
T |
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| Q |
146 |
ggaattgttgttacaaatacacctagtgcaaattcacctttctagcagaacactagtaaaggaattatatggccaaataagtgcaaaaaatgaaagcaga |
245 |
Q |
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| T |
36864162 |
ggaattgttgttacagatacacctagtgcaaattcacctttctagcagaacactagtaaaggaattatatggccaaataagtgcaaaaaatgaaagcaga |
36864261 |
T |
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| Q |
246 |
tggctatagacagtcttcaactaacaattgaactatgatctactgaaatgtatgtcg |
302 |
Q |
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| T |
36864262 |
tggctatagacagtcttcaactaacaattgaactatgatctactgaaatgtatgtcg |
36864318 |
T |
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