View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1276-Insertion-1 (Length: 464)

Name: NF1276-Insertion-1
Description: NF1276
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1276-Insertion-1
NF1276-Insertion-1
[»] chr1 (39 HSPs)
chr1 (182-464)||(50461837-50462115)
chr1 (34-155)||(50461685-50461808)
chr1 (52-147)||(45416144-45416240)
chr1 (52-146)||(36666542-36666637)
chr1 (34-146)||(11333673-11333787)
chr1 (34-146)||(11491694-11491808)
chr1 (58-139)||(18607781-18607863)
chr1 (58-149)||(25036234-25036326)
chr1 (58-149)||(25041446-25041538)
chr1 (52-146)||(47469039-47469134)
chr1 (68-146)||(8741482-8741560)
chr1 (58-146)||(11860051-11860140)
chr1 (52-126)||(1247284-1247359)
chr1 (52-146)||(29204654-29204749)
chr1 (52-141)||(23991230-23991320)
chr1 (52-110)||(48368507-48368565)
chr1 (76-137)||(33171955-33172016)
chr1 (52-146)||(35605588-35605684)
chr1 (52-146)||(42490375-42490471)
chr1 (52-141)||(18467163-18467254)
chr1 (36-146)||(30245973-30246085)
chr1 (90-149)||(9413801-9413860)
chr1 (35-146)||(9866131-9866245)
chr1 (52-149)||(19564119-19564216)
chr1 (34-146)||(31124585-31124699)
chr1 (52-141)||(41926991-41927080)
chr1 (92-146)||(42299520-42299574)
chr1 (84-141)||(4865821-4865878)
chr1 (52-146)||(7166192-7166288)
chr1 (52-146)||(7191041-7191137)
chr1 (52-146)||(11215010-11215106)
chr1 (58-146)||(16997231-16997320)
chr1 (113-146)||(17111247-17111280)
chr1 (52-146)||(27233996-27234092)
chr1 (52-146)||(39670795-39670887)
chr1 (76-147)||(3767964-3768036)
chr1 (52-141)||(4553511-4553602)
chr1 (94-146)||(23933077-23933129)
chr1 (70-146)||(48638541-48638617)
[»] chr2 (23 HSPs)
chr2 (54-146)||(23919445-23919538)
chr2 (52-146)||(32189968-32190063)
chr2 (76-146)||(15764939-15765009)
chr2 (52-146)||(41566771-41566867)
chr2 (57-141)||(44558017-44558101)
chr2 (58-141)||(24581436-24581520)
chr2 (68-146)||(2145718-2145796)
chr2 (58-128)||(3596277-3596348)
chr2 (92-139)||(4858708-4858755)
chr2 (106-149)||(14663990-14664033)
chr2 (52-146)||(20919619-20919714)
chr2 (52-141)||(43214370-43214458)
chr2 (87-141)||(9375102-9375156)
chr2 (58-126)||(13242703-13242772)
chr2 (77-141)||(22538550-22538614)
chr2 (94-146)||(23405205-23405257)
chr2 (58-146)||(31223629-31223719)
chr2 (78-128)||(15575005-15575055)
chr2 (52-146)||(4183185-4183281)
chr2 (77-146)||(31411844-31411913)
chr2 (76-141)||(35972550-35972615)
chr2 (68-128)||(15939316-15939376)
chr2 (90-142)||(17089256-17089308)
[»] chr6 (26 HSPs)
chr6 (52-149)||(24319019-24319117)
chr6 (52-141)||(15305070-15305160)
chr6 (94-149)||(32788863-32788918)
chr6 (52-146)||(34432762-34432858)
chr6 (52-138)||(34268299-34268386)
chr6 (68-146)||(32283547-32283625)
chr6 (52-149)||(2488853-2488950)
chr6 (77-146)||(20568277-20568346)
chr6 (97-146)||(23610331-23610380)
chr6 (58-146)||(6210063-6210153)
chr6 (58-135)||(17534867-17534945)
chr6 (84-146)||(19374839-19374901)
chr6 (82-144)||(22269781-22269843)
chr6 (91-141)||(32620077-32620127)
chr6 (52-146)||(2426073-2426169)
chr6 (52-146)||(3795739-3795835)
chr6 (77-114)||(5757891-5757928)
chr6 (52-146)||(9435635-9435731)
chr6 (52-146)||(19892241-19892337)
chr6 (52-146)||(30885535-30885631)
chr6 (96-141)||(32388240-32388285)
chr6 (70-146)||(15091457-15091533)
chr6 (94-146)||(15963952-15964004)
chr6 (113-149)||(28021234-28021270)
chr6 (62-121)||(31952303-31952363)
chr6 (94-146)||(32670063-32670115)
[»] chr5 (24 HSPs)
chr5 (52-146)||(12473991-12474085)
chr5 (91-149)||(41083543-41083601)
chr5 (76-149)||(436552-436625)
chr5 (94-138)||(3165998-3166042)
chr5 (52-146)||(32550185-32550280)
chr5 (68-146)||(3198336-3198414)
chr5 (52-125)||(8571823-8571897)
chr5 (91-149)||(11313484-11313542)
chr5 (51-128)||(12053476-12053554)
chr5 (97-141)||(13462126-13462171)
chr5 (76-149)||(18597415-18597488)
chr5 (52-146)||(18928729-18928825)
chr5 (52-149)||(8478858-8478957)
chr5 (52-137)||(20707752-20707839)
chr5 (68-147)||(28758400-28758480)
chr5 (98-146)||(41127028-41127076)
chr5 (68-146)||(39800013-39800091)
chr5 (58-146)||(4067991-4068080)
chr5 (52-146)||(36124408-36124504)
chr5 (84-149)||(39165023-39165088)
chr5 (91-147)||(12075406-12075462)
chr5 (52-139)||(20145530-20145618)
chr5 (94-146)||(35112971-35113023)
chr5 (58-149)||(40276414-40276506)
[»] chr8 (36 HSPs)
chr8 (64-149)||(32191855-32191940)
chr8 (58-146)||(20872431-20872519)
chr8 (52-146)||(12770377-12770472)
chr8 (52-137)||(25824868-25824954)
chr8 (52-141)||(30676270-30676360)
chr8 (52-141)||(38283138-38283228)
chr8 (58-146)||(481020-481109)
chr8 (52-146)||(16449134-16449230)
chr8 (52-149)||(10573107-10573206)
chr8 (52-139)||(25890370-25890458)
chr8 (52-146)||(5683763-5683858)
chr8 (76-146)||(8698571-8698641)
chr8 (68-146)||(13059160-13059238)
chr8 (68-146)||(22437774-22437851)
chr8 (68-146)||(40393327-40393405)
chr8 (76-141)||(7948386-7948451)
chr8 (94-147)||(18412564-18412617)
chr8 (35-146)||(26192664-26192777)
chr8 (52-149)||(29729124-29729224)
chr8 (70-146)||(27077082-27077158)
chr8 (66-146)||(33318063-33318143)
chr8 (66-146)||(39362274-39362354)
chr8 (58-141)||(44444558-44444642)
chr8 (92-139)||(550317-550364)
chr8 (52-146)||(11231429-11231524)
chr8 (52-146)||(25812175-25812270)
chr8 (52-141)||(20894665-20894754)
chr8 (52-149)||(22274577-22274675)
chr8 (52-141)||(43846949-43847039)
chr8 (68-137)||(6851009-6851078)
chr8 (68-141)||(22202727-22202799)
chr8 (52-146)||(26022256-26022352)
chr8 (70-146)||(5328552-5328628)
chr8 (66-141)||(14583210-14583286)
chr8 (93-149)||(26796964-26797020)
chr8 (94-134)||(41272115-41272155)
[»] scaffold0250 (1 HSPs)
scaffold0250 (52-146)||(15014-15109)
[»] chr7 (31 HSPs)
chr7 (52-146)||(4611248-4611342)
chr7 (52-141)||(12935754-12935844)
chr7 (58-146)||(41331051-41331140)
chr7 (58-146)||(40518861-40518950)
chr7 (52-146)||(38151353-38151448)
chr7 (52-149)||(47437940-47438038)
chr7 (92-141)||(7664196-7664245)
chr7 (68-141)||(22548225-22548298)
chr7 (52-139)||(4886856-4886942)
chr7 (51-146)||(36931982-36932078)
chr7 (94-141)||(27704308-27704355)
chr7 (84-146)||(3532587-3532649)
chr7 (68-149)||(10901650-10901732)
chr7 (52-149)||(21066892-21066990)
chr7 (68-126)||(27788298-27788356)
chr7 (68-126)||(27791454-27791512)
chr7 (93-138)||(9497695-9497740)
chr7 (105-142)||(22610049-22610086)
chr7 (52-146)||(34267516-34267612)
chr7 (68-149)||(37411720-37411801)
chr7 (77-141)||(37917403-37917467)
chr7 (105-146)||(44831641-44831682)
chr7 (58-126)||(47194396-47194465)
chr7 (60-146)||(47641054-47641142)
chr7 (52-146)||(48719808-48719904)
chr7 (41-115)||(2846014-2846090)
chr7 (58-133)||(12007767-12007842)
chr7 (52-139)||(23274780-23274868)
chr7 (106-146)||(27159705-27159745)
chr7 (82-146)||(41084048-41084112)
chr7 (90-146)||(47542981-47543037)
[»] chr4 (38 HSPs)
chr4 (52-146)||(2629588-2629683)
chr4 (52-141)||(31890753-31890843)
chr4 (34-146)||(51890806-51890920)
chr4 (58-146)||(45139853-45139942)
chr4 (52-134)||(32287506-32287589)
chr4 (76-141)||(41137911-41137976)
chr4 (35-141)||(12625843-12625951)
chr4 (85-133)||(13734961-13735009)
chr4 (35-137)||(23924820-23924924)
chr4 (52-139)||(28465740-28465828)
chr4 (90-141)||(26250661-26250712)
chr4 (52-137)||(24704147-24704232)
chr4 (36-128)||(42664008-42664102)
chr4 (68-141)||(624494-624567)
chr4 (58-130)||(13088934-13089007)
chr4 (52-149)||(27091439-27091536)
chr4 (58-146)||(29406366-29406455)
chr4 (52-146)||(40051631-40051727)
chr4 (52-146)||(48569141-48569237)
chr4 (52-146)||(55021563-55021659)
chr4 (58-137)||(6170941-6171021)
chr4 (52-139)||(42002322-42002410)
chr4 (77-141)||(50376641-50376705)
chr4 (52-146)||(42081744-42081839)
chr4 (52-146)||(47678560-47678654)
chr4 (68-146)||(43539821-43539899)
chr4 (68-146)||(50512369-50512447)
chr4 (68-137)||(11294821-11294890)
chr4 (52-146)||(37935870-37935966)
chr4 (52-146)||(40994068-40994164)
chr4 (90-146)||(17815430-17815486)
chr4 (105-141)||(22433391-22433427)
chr4 (52-137)||(23778790-23778877)
chr4 (58-139)||(25235768-25235851)
chr4 (70-146)||(34932504-34932580)
chr4 (97-149)||(43627273-43627325)
chr4 (94-146)||(50279049-50279101)
chr4 (94-146)||(52757287-52757339)
[»] chr3 (47 HSPs)
chr3 (66-141)||(23653197-23653272)
chr3 (68-147)||(38949682-38949761)
chr3 (52-149)||(4227710-4227808)
chr3 (52-141)||(29531228-29531318)
chr3 (52-146)||(32776220-32776316)
chr3 (36-146)||(24303399-24303511)
chr3 (52-138)||(5173976-5174063)
chr3 (60-146)||(49983682-49983769)
chr3 (68-138)||(48443136-48443208)
chr3 (58-141)||(19222558-19222642)
chr3 (67-146)||(29775236-29775315)
chr3 (58-128)||(35849508-35849579)
chr3 (68-139)||(55383871-55383942)
chr3 (76-146)||(15491862-15491932)
chr3 (68-146)||(43280077-43280155)
chr3 (35-146)||(44764731-44764842)
chr3 (68-146)||(47098525-47098603)
chr3 (52-141)||(48515351-48515441)
chr3 (53-146)||(53203833-53203927)
chr3 (52-146)||(3748567-3748663)
chr3 (84-137)||(9685014-9685067)
chr3 (52-146)||(22501896-22501992)
chr3 (77-141)||(28226207-28226272)
chr3 (52-146)||(34898732-34898828)
chr3 (106-146)||(4237000-4237040)
chr3 (68-128)||(46817334-46817394)
chr3 (58-146)||(13638216-13638306)
chr3 (77-124)||(37756433-37756480)
chr3 (76-138)||(3614071-3614133)
chr3 (52-137)||(26880195-26880281)
chr3 (52-149)||(49443389-49443487)
chr3 (112-146)||(50526659-50526693)
chr3 (52-146)||(4541907-4542002)
chr3 (84-133)||(12792323-12792372)
chr3 (84-149)||(25938929-25938994)
chr3 (83-128)||(28951743-28951788)
chr3 (52-146)||(31586956-31587052)
chr3 (52-146)||(39966039-39966135)
chr3 (70-147)||(42920632-42920709)
chr3 (68-141)||(49375664-49375737)
chr3 (52-136)||(49577388-49577473)
chr3 (68-141)||(52309093-52309166)
chr3 (58-141)||(32401505-32401588)
chr3 (70-146)||(34102596-34102672)
chr3 (52-149)||(39719941-39720040)
chr3 (70-146)||(48739729-48739805)
chr3 (53-146)||(53347256-53347351)
[»] scaffold0025 (1 HSPs)
scaffold0025 (52-146)||(65752-65848)
[»] scaffold0121 (1 HSPs)
scaffold0121 (53-146)||(46535-46630)
[»] scaffold0519 (1 HSPs)
scaffold0519 (52-146)||(2928-3023)
[»] scaffold0445 (1 HSPs)
scaffold0445 (52-146)||(3979-4075)
[»] scaffold0010 (1 HSPs)
scaffold0010 (66-146)||(236338-236416)
[»] scaffold0460 (1 HSPs)
scaffold0460 (94-146)||(13212-13264)


Alignment Details
Target: chr1 (Bit Score: 216; Significance: 1e-118; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 182 - 464
Target Start/End: Original strand, 50461837 - 50462115
Alignment:
Q  182 aactcatttcaataatcaaaatgtgttagatacagtttttggtataatgactataactgataaggtagtcaacttcatttgnnnnnnnnnnnnnnacaag 281  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||              |||||    
T  50461837 aactcatttcaataatcaaaatgtgttagatacagtttttgatataatgactataactgataaggtggtcaacttcatttgtttttttttt----acaag 50461932  T
Q  282 caatttcatttgtttgtttccatacaaacttaacacttacgttatcataatattgactaaacagggctatattatgcggttcttgttttcctattaccac 381  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50461933 caatttcatttgtttgtttccatacaaacttaacacttacgttttcataatattgactaaacagggctatattatgcggttcttgttttcctattaccac 50462032  T
Q  382 acacacgaagggttcatttactatgcatattctatgttttcaccttcaatttaactaataaacatgacaatataaatttgata 464  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50462033 acacacgaagggttcatttactttccatattctatgttttcaccttcaatttaactaataaacatgacaatataaatttgata 50462115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 34 - 155
Target Start/End: Original strand, 50461685 - 50461808
Alignment:
Q  34 ggtctaatagtctag-ggatagagttcacacaattaatgtggggaagtgagg-tgtttgggattcgaaccccaaccccttcataaattatgcaatgttcc 131  Q
    ||||||||| ||||| |||||||| ||||||||||||| ||| |||||| || |||||||  ||| ||||||||||||| |||||||||| |||||||||    
T  50461685 ggtctaataatctagtggatagagctcacacaattaatatggagaagtgggggtgtttggagttcaaaccccaacccctacataaattatacaatgttcc 50461784  T
Q  132 taccaactgaactaaactgtgtgc 155  Q
    |||||||||| ||||||| |||||    
T  50461785 taccaactgagctaaactatgtgc 50461808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 52 - 147
Target Start/End: Original strand, 45416144 - 45416240
Alignment:
Q  52 tagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaaa 147  Q
    |||||||||||||||||| ||||| |||||| |||||  ||||||||||||||  ||||| ||||||||||||||||||||| ||||||||| ||||    
T  45416144 tagagttcacacaattaaatgtggagaagtggggtgtccgggattcgaaccccggcccctgcataaattatgcaatgttcctgccaactgaattaaa 45416240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 52 - 146
Target Start/End: Original strand, 36666542 - 36666637
Alignment:
Q  52 tagagttcacacaattaat-gtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| ||||||||||||| |||| |||||| |||||  ||| ||||||||||  ||||| ||||||||||||||||| |||||||||||| ||||    
T  36666542 tagagctcacacaattaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctaccaactgagctaa 36666637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 11333787 - 11333673
Alignment:
Q  34 ggtctaatagtctaggga-tagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcc 131  Q
    |||||| |||||||| || ||||| |||||||||||| ||||| |||||| |||||  ||| ||||||| ||  ||||| ||||||||||||||||| ||    
T  11333787 ggtctagtagtctagtgactagagctcacacaattaaatgtggagaagtggggtgtccggggttcgaactccggcccctgcataaattatgcaatgtccc 11333688  T
Q  132 taccaactgaactaa 146  Q
    |||||||||| ||||    
T  11333687 taccaactgagctaa 11333673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 11491808 - 11491694
Alignment:
Q  34 ggtctaatagtctaggga-tagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcc 131  Q
    |||||| |||||||| || ||||| |||||||||||| ||||| |||||| |||||  ||| ||||||| ||  ||||| ||||||||||||||||| ||    
T  11491808 ggtctagtagtctagtgactagagctcacacaattaaatgtggagaagtggggtgtccggggttcgaactccggcccctgcataaattatgcaatgtccc 11491709  T
Q  132 taccaactgaactaa 146  Q
    |||||||||| ||||    
T  11491708 taccaactgagctaa 11491694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 58 - 139
Target Start/End: Original strand, 18607781 - 18607863
Alignment:
Q  58 tcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaact 139  Q
    |||||||||||| ||| | |||||| |||||| ||| ||||||||||| ||||| ||||||||||||||||| ||||||||||    
T  18607781 tcacacaattaaatgtagagaagtggggtgttcggggttcgaaccccagcccctgcataaattatgcaatgtccctaccaact 18607863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 58 - 149
Target Start/End: Original strand, 25036234 - 25036326
Alignment:
Q  58 tcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaaact 149  Q
    |||||||||||| ||||| ||| || |||||| ||| |||||| |||  ||||| ||||||||||||||||||||| |||||||| |||||||    
T  25036234 tcacacaattaaatgtggagaaatggggtgttcggggttcgaatcccggcccctgcataaattatgcaatgttcctgccaactgagctaaact 25036326  T

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Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 58 - 149
Target Start/End: Original strand, 25041446 - 25041538
Alignment:
Q  58 tcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaaact 149  Q
    |||||||||||| ||||| ||| || |||||| ||| |||||| |||  ||||| ||||||||||||||||||||| |||||||| |||||||    
T  25041446 tcacacaattaaatgtggagaaatggggtgttcggggttcgaatcccggcccctgcataaattatgcaatgttcctgccaactgagctaaact 25041538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 52 - 146
Target Start/End: Original strand, 47469039 - 47469134
Alignment:
Q  52 tagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| |||||||||||| ||||| |||||| |||||  ||| |||||||| || ||||| ||||||||||||||||| ||| |||||||| ||||    
T  47469039 tagagctcacacaattaaatgtggagaagtggggtgtccggggttcgaacctcagcccctgcataaattatgcaatgtccctgccaactgagctaa 47469134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 8741560 - 8741482
Alignment:
Q  68 aatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||||| |||||| |||||  ||| ||||||||||  ||||| ||||||||||| ||||| |||||||||||||||||    
T  8741560 aatgtggagaagtggggtgtcaggggttcgaacccctgcccctgcataaattatgtaatgtccctaccaactgaactaa 8741482  T

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Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 11860140 - 11860051
Alignment:
Q  58 tcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    |||||||||||| ||||| |||||| |||||  ||| |||||||||| ||||||  ||||||||||||||||| || |||||||| ||||    
T  11860140 tcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccgacccctatataaattatgcaatgtttctgccaactgagctaa 11860051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 126
Target Start/End: Complemental strand, 1247359 - 1247284
Alignment:
Q  52 tagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaat 126  Q
    ||||| ||| |||||||| ||||| |||||||||||| |||| |||||||| | |||||| |||||||||||||||    
T  1247359 tagagctcaaacaattaaatgtggagaagtgaggtgtctggggttcgaacctcgacccctgcataaattatgcaat 1247284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 146
Target Start/End: Complemental strand, 29204749 - 29204654
Alignment:
Q  52 tagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    |||||||||||||| ||| ||||| |||||| ||| | ||||||||||||| |  | | | ||||||||||||||||| |||||||||||| ||||    
T  29204749 tagagttcacacaactaaatgtggagaagtggggtatctgggattcgaacctcggctcttgcataaattatgcaatgtccctaccaactgagctaa 29204654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 23991230 - 23991320
Alignment:
Q  52 tagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactga 141  Q
    ||||| |||||||||||| ||||| |||||| |||||   || ||||||||||  ||||| ||||||||||||||||| ||| ||||||||    
T  23991230 tagagctcacacaattaaatgtggagaagtggggtgtccagggttcgaaccccggcccctgcataaattatgcaatgtccctgccaactga 23991320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 48368565 - 48368507
Alignment:
Q  52 tagagttcacacaattaatgtggggaagtgaggtgtttgggattcgaaccccaacccct 110  Q
    ||||||||||||||||||||||| |||||| |||||  | | |||||||||||||||||    
T  48368565 tagagttcacacaattaatgtggagaagtggggtgtccgaggttcgaaccccaacccct 48368507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 76 - 137
Target Start/End: Complemental strand, 33172016 - 33171955
Alignment:
Q  76 gaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaa 137  Q
    |||||||| || | ||| ||||||| ||||| ||| ||||||||||||||||||||||||||    
T  33172016 gaagtgagatgatcggggttcgaactccaactcctgcataaattatgcaatgttcctaccaa 33171955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 52 - 146
Target Start/End: Original strand, 35605588 - 35605684
Alignment:
Q  52 tagagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| |||||||||| |  ||||| |||||| ||||||| || |||||||||| |||||| |||| | |||||||| | |||||||||||| ||||    
T  35605588 tagagctcacacaatttaattgtggagaagtggggtgtttagggttcgaaccccgacccctgcatataatatgcaatatccctaccaactgagctaa 35605684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 52 - 146
Target Start/End: Original strand, 42490375 - 42490471
Alignment:
Q  52 tagagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    |||||||||||||||| |  ||||| |||||| |||||  ||| |||||||||| |||||| |||| | |||||||| | |||||||||||| ||||    
T  42490375 tagagttcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccgacccctgcatataatatgcaatatccctaccaactgagctaa 42490471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 18467163 - 18467254
Alignment:
Q  52 tagagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactga 141  Q
    ||||| ||||||||||||  ||||| ||||||  |||| |||| ||||||||||| ||||| |||| | |||||||| | ||||||||||||    
T  18467163 tagagctcacacaattaaattgtggagaagtggagtgtctggggttcgaaccccagcccctgcatataatatgcaatatccctaccaactga 18467254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 146
Target Start/End: Original strand, 30245973 - 30246085
Alignment:
Q  36 tctaatagtctag-ggatagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttccta 133  Q
    |||| |||||||| || ||||| ||| |||||||| ||||| |||||| ||| || ||| |||||| ||| |||||| ||| ||||||||||||| ||||    
T  30245973 tctagtagtctagtggctagagctcatacaattaaatgtggagaagtggggtattcggggttcgaatcccgacccctgcatcaattatgcaatgtcccta 30246072  T
Q  134 ccaactgaactaa 146  Q
    |||| ||| ||||    
T  30246073 ccaaatgagctaa 30246085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 149
Target Start/End: Complemental strand, 9413860 - 9413801
Alignment:
Q  90 gggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaaact 149  Q
    |||||||||||||| | || | |||| |||||||| ||||| ||||||||||||||||||    
T  9413860 gggattcgaaccccgaaccttacatatattatgcattgttcttaccaactgaactaaact 9413801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 146
Target Start/End: Original strand, 9866131 - 9866245
Alignment:
Q  35 gtctaatagtctag-ggatagagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcc 131  Q
    ||||| |||||||| || ||||| |||||||||| |  |||||  |||||  ||||| |||||||||||||| |||||| |||| | |||||||| | ||    
T  9866131 gtctagtagtctagtggctagagctcacacaatttaattgtggaaaagtggagtgttcgggattcgaaccccgacccctgcatataatatgcaatatccc 9866230  T
Q  132 taccaactgaactaa 146  Q
    |||||||||| ||||    
T  9866231 taccaactgagctaa 9866245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 149
Target Start/End: Original strand, 19564119 - 19564216
Alignment:
Q  52 tagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaaact 149  Q
    |||||||||||||||||| ||||| |||||| |||||  | | ||||||||||  ||| | ||||||||||||||||| | | |||||||| |||||||    
T  19564119 tagagttcacacaattaaatgtggagaagtggggtgtccgaggttcgaaccccggccc-tgcataaattatgcaatgtccttgccaactgagctaaact 19564216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 31124585 - 31124699
Alignment:
Q  34 ggtctaatagtctag-ggatagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcc 131  Q
    |||||||||| |||| || ||||| |||||||||||| ||||| |||||| ||| |  ||  ||||||||||  ||||| ||||||||||||||||| |     
T  31124585 ggtctaatagcctagtggctagagctcacacaattaaatgtggagaagtggggtatccggagttcgaaccccggcccctgcataaattatgcaatgtcct 31124684  T
Q  132 taccaactgaactaa 146  Q
    | |||||||| ||||    
T  31124685 tgccaactgagctaa 31124699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 41927080 - 41926991
Alignment:
Q  52 tagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactga 141  Q
    ||||| |||||||||||| ||||| ||||| ||||||  |||||||||| | || ||||  |||||||||||||||| ||||| |||||||    
T  41927080 tagagctcacacaattaaatgtggagaagtaaggtgtccgggattcgaatctcagccccagcataaattatgcaatg-tcctatcaactga 41926991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 92 - 146
Target Start/End: Original strand, 42299520 - 42299574
Alignment:
Q  92 gattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||||||| ||||||||| |||| | |||||||| | |||||||||||||||||    
T  42299520 gattcgaactccaacccctgcatataatatgcaatatccctaccaactgaactaa 42299574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 141
Target Start/End: Original strand, 4865821 - 4865878
Alignment:
Q  84 gtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactga 141  Q
    ||||| ||| ||||||| || |||||| |||| |||||||||||| ||||||||||||    
T  4865821 gtgttcggggttcgaactccgacccctacatatattatgcaatgtccctaccaactga 4865878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 146
Target Start/End: Original strand, 7166192 - 7166288
Alignment:
Q  52 tagagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| ||||||||||||  ||||| ||||||  ||||  ||| ||||||||||| ||||| |||| | |||||||| | |||||||||||| ||||    
T  7166192 tagagctcacacaattaaattgtggagaagtggagtgtccggggttcgaaccccagcccctgcatataatatgcaatatccctaccaactgagctaa 7166288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 146
Target Start/End: Complemental strand, 7191137 - 7191041
Alignment:
Q  52 tagagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| |||||||||| |  ||||| ||||||||||||  ||| ||||||||||| ||||| |||| | |||||||| | |||| ||||||| ||||    
T  7191137 tagagctcacacaatttaattgtggagaagtgaggtgtccggggttcgaaccccagcccctgcatataatatgcaatatccctatcaactgagctaa 7191041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 146
Target Start/End: Complemental strand, 11215106 - 11215010
Alignment:
Q  52 tagagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| ||||||||||||  ||||| ||||||  |||| |||| |||||||| || ||||| |||| | |||||||| | |||||||||||| ||||    
T  11215106 tagagctcacacaattaaattgtggagaagtggagtgtctggggttcgaacctcagcccctgcatataatatgcaatatccctaccaactgagctaa 11215010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 16997231 - 16997320
Alignment:
Q  58 tcacacaatt-aatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    |||||||||| ||||||| ||||||||||||  ||| |||||||| |  ||||| |||||| |||||| |||  ||||||||||| ||||    
T  16997231 tcacacaattgaatgtggagaagtgaggtgtccggggttcgaacctcggcccctgcataaaatatgcattgtctctaccaactgagctaa 16997320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 146
Target Start/End: Complemental strand, 17111280 - 17111247
Alignment:
Q  113 ataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||||||||||||||||||||||||||| ||||    
T  17111280 ataaattatgcaatgttcctaccaactgatctaa 17111247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 146
Target Start/End: Complemental strand, 27234092 - 27233996
Alignment:
Q  52 tagagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| |||||||||| |  ||||| ||||||  ||||| ||||||||||||||  ||||| |||| | |||||||| ||| |||||| ||||||||    
T  27234092 tagagctcacacaatttaattgtggagaagtggagtgttcgggattcgaaccccggcccctgcatataatatgcaatattcataccaattgaactaa 27233996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 146
Target Start/End: Original strand, 39670795 - 39670887
Alignment:
Q  52 tagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| |||||||||||| ||||| |||||| | ||| |||  ||||||||||||||||| |||||   |||||||||||||  ||||||| ||||    
T  39670795 tagagctcacacaattaaatgtggagaagtgggatgtctggagttcgaaccccaacccctgcataa---atgcaatgttcctgtcaactgagctaa 39670887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 3767964 - 3768036
Alignment:
Q  76 gaagtgaggtgtttgggattcgaaccccaaccccttcata-aattatgcaatgttcctaccaactgaactaaa 147  Q
    |||||| |||||  || |||||||||||||||||| |||| || |||||||| | |||||||||||| |||||    
T  3767964 gaagtggggtgtccggaattcgaaccccaacccctgcatataaatatgcaatatccctaccaactgagctaaa 3768036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 4553511 - 4553602
Alignment:
Q  52 tagagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactga 141  Q
    ||||| |||||||||| |  ||||| ||||||||||||  | |||||||||| || ||||| |||| | |||||||| || |||||||||||    
T  4553511 tagagctcacacaatttaattgtggagaagtgaggtgtccgagattcgaacctcagcccctgcatataatatgcaatatttctaccaactga 4553602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 23933077 - 23933129
Alignment:
Q  94 ttcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    |||||||||| ||||||  ||||||||| |||||| |||||||||||| ||||    
T  23933077 ttcgaaccccgacccctagataaattatacaatgtccctaccaactgagctaa 23933129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 70 - 146
Target Start/End: Complemental strand, 48638617 - 48638541
Alignment:
Q  70 tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| |||||| ||||| |||| ||||||||||| ||||| |||| |  ||||||| | |||||||||||| ||||    
T  48638617 tgtggagaagtggggtgtctggggttcgaaccccagcccctgcatataaaatgcaatatccctaccaactgagctaa 48638541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 2e-19; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 54 - 146
Target Start/End: Original strand, 23919445 - 23919538
Alignment:
Q  54 gagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    |||||||||||||||| ||||| ||| || ||||| ||||||||||||||| |||||| |||| |||||||||||| |||||||||||| ||||    
T  23919445 gagttcacacaattaaatgtggagaaatggggtgtctgggattcgaaccccgacccctccatatattatgcaatgtccctaccaactgagctaa 23919538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 52 - 146
Target Start/End: Original strand, 32189968 - 32190063
Alignment:
Q  52 tagagttcacacaattaat-gtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| ||||||||||||| || |  |||||||||||  ||| ||||||||||  ||||| ||||||||||||||||| |||||||||||||||||    
T  32189968 tagagctcacacaattaattgtagaaaagtgaggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctaccaactgaactaa 32190063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 76 - 146
Target Start/End: Complemental strand, 15765009 - 15764939
Alignment:
Q  76 gaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    |||||||||||| |||||||||||||||||||||| |||| | |||||||| | |||||||||||| ||||    
T  15765009 gaagtgaggtgtctgggattcgaaccccaacccctgcatataatatgcaatatccctaccaactgagctaa 15764939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 52 - 146
Target Start/End: Complemental strand, 41566867 - 41566771
Alignment:
Q  52 tagagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| ||||||||||||  ||||| ||||||  |||| |||||||||||| ||||||||| |||| | |||||||| |||||||||||||| ||||    
T  41566867 tagagctcacacaattaaattgtggagaagtggagtgtctgggattcgaactccaacccctgcatataatatgcaatattcctaccaactgagctaa 41566771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 57 - 141
Target Start/End: Complemental strand, 44558101 - 44558017
Alignment:
Q  57 ttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactga 141  Q
    ||||||||||||| ||||| |||||| |||||  ||| ||||||||||| ||||| |||||||||||||||| |||||||||||||    
T  44558101 ttcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccagcccctgcataaattatgcaatg-tcctaccaactga 44558017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 58 - 141
Target Start/End: Original strand, 24581436 - 24581520
Alignment:
Q  58 tcacacaattaat-gtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactga 141  Q
    ||||||||||||| |||| ||||||||||||| ||||| ||||||||| ||||| |||| |||||||||| | ||| ||||||||    
T  24581436 tcacacaattaattgtggagaagtgaggtgttcgggatacgaaccccagcccctgcatatattatgcaatatccctgccaactga 24581520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 68 - 146
Target Start/End: Original strand, 2145718 - 2145796
Alignment:
Q  68 aatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||||| |||||| |||||  ||||||| |||| |  ||||| ||||||||||||||||| |||||||||||||||||    
T  2145718 aatgtggagaagtggggtgtcagggattcaaacctctgcccctgcataaattatgcaatgtccctaccaactgaactaa 2145796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 58 - 128
Target Start/End: Complemental strand, 3596348 - 3596277
Alignment:
Q  58 tcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgt 128  Q
    |||||||||||| ||||| |||||| |||||  ||| |||||||||| |||||| |||||||||||||||||    
T  3596348 tcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccgacccctgcataaattatgcaatgt 3596277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 92 - 139
Target Start/End: Original strand, 4858708 - 4858755
Alignment:
Q  92 gattcgaaccccaaccccttcataaattatgcaatgttcctaccaact 139  Q
    ||||||||||||| ||||| ||||||||||||||||| ||||||||||    
T  4858708 gattcgaaccccagcccctgcataaattatgcaatgtccctaccaact 4858755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 106 - 149
Target Start/End: Complemental strand, 14664033 - 14663990
Alignment:
Q  106 ccccttcataaattatgcaatgttcctaccaactgaactaaact 149  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||    
T  14664033 cccctgcataaattatgcaatgtccctaccaactgaactaaact 14663990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 146
Target Start/End: Complemental strand, 20919714 - 20919619
Alignment:
Q  52 tagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| ||||| |||||| ||||| |||||| |||||  ||| ||||||||||  ||||  ||||||||||||||||| |||||||||||| ||||    
T  20919714 tagagctcacataattaaatgtggagaagtggggtgtccggggttcgaaccccggccccagcataaattatgcaatgtccctaccaactgagctaa 20919619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 43214458 - 43214370
Alignment:
Q  52 tagagttcacacaattaat-gtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactga 141  Q
    ||||| ||||||||||||  |||| |||||||||||| |||  |||||||| || ||||| ||||||||||||||| | ||||||||||||    
T  43214458 tagagctcacacaattaaacgtggagaagtgaggtgtctgg--ttcgaacctcagcccctacataaattatgcaatatccctaccaactga 43214370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 141
Target Start/End: Original strand, 9375102 - 9375156
Alignment:
Q  87 tttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactga 141  Q
    |||||| |||||||||| |||||| |||| |||||||||||||||| ||||||||    
T  9375102 tttggggttcgaaccccgacccctacatatattatgcaatgttcctgccaactga 9375156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 58 - 126
Target Start/End: Original strand, 13242703 - 13242772
Alignment:
Q  58 tcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaat 126  Q
    |||||||||||| ||||| ||||||||||||  | | |||||||||| |||||| |||||||||||||||    
T  13242703 tcacacaattaaatgtggagaagtgaggtgtccgaggttcgaaccccgacccctgcataaattatgcaat 13242772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 77 - 141
Target Start/End: Complemental strand, 22538614 - 22538550
Alignment:
Q  77 aagtgaggtgtttgggattcgaaccccaaccccttcata-aattatgcaatgttcctaccaactga 141  Q
    |||||||||||| ||||||||||||||||||||| |||| ||| ||||| || |||||||||||||    
T  22538614 aagtgaggtgttcgggattcgaaccccaacccctgcatataataatgcattg-tcctaccaactga 22538550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 23405257 - 23405205
Alignment:
Q  94 ttcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    |||||||||| |||||| |||| |||||||||||| |||||||||||| ||||    
T  23405257 ttcgaaccccgacccctgcatatattatgcaatgtccctaccaactgagctaa 23405205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 31223719 - 31223629
Alignment:
Q  58 tcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||||||||||  ||||| ||||||  |||| |||| ||| ||||||| ||||| |||| | |||||||| | |||||||||||||||||    
T  31223719 tcacacaattaaattgtggagaagtggagtgtctggggttcaaaccccagcccctgcatataatatgcaatatccctaccaactgaactaa 31223629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 15575055 - 15575005
Alignment:
Q  78 agtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgt 128  Q
    |||| |||||| ||||||||||||||  ||||| |||||||||||||||||    
T  15575055 agtgcggtgttcgggattcgaaccccggcccctgcataaattatgcaatgt 15575005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 146
Target Start/End: Complemental strand, 4183281 - 4183185
Alignment:
Q  52 tagagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    |||||||||||||||| |  ||||| ||||||  ||||| ||| |||||||||| || ||| |||| | |||||||| | |||||||||||| ||||    
T  4183281 tagagttcacacaatttaattgtggagaagtggagtgttcggggttcgaaccccgactcctgcatataatatgcaatatccctaccaactgagctaa 4183185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 146
Target Start/End: Original strand, 31411844 - 31411913
Alignment:
Q  77 aagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| |||||| |||||||||||  || ||||| |||||||||| |||||||| |||||| ||| ||||    
T  31411844 aagtggggtgttcgggattcgaacttcagcccctgcataaattatacaatgttcataccaattgagctaa 31411913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 141
Target Start/End: Original strand, 35972550 - 35972615
Alignment:
Q  76 gaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactga 141  Q
    ||||||| ||||  ||| ||||||||||| ||||| |||||| |||| ||| ||||||||||||||    
T  35972550 gaagtgaagtgtccggggttcgaaccccagcccctgcataaaatatgtaatattcctaccaactga 35972615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 15939376 - 15939316
Alignment:
Q  68 aatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgt 128  Q
    ||||||| |||||| |||||| ||| ||||||||| |||| || |||| ||||||||||||    
T  15939376 aatgtggagaagtggggtgttcggggttcgaaccctaacctctgcatatattatgcaatgt 15939316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 17089308 - 17089256
Alignment:
Q  90 gggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaa 142  Q
    |||||||||||||| || ||| |||| | |||||||| |||||||||||||||    
T  17089308 gggattcgaaccccgactcctgcatataatatgcaatattcctaccaactgaa 17089256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 52 - 149
Target Start/End: Complemental strand, 24319117 - 24319019
Alignment:
Q  52 tagagttcacacaattaat-gtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaaact 149  Q
    ||||| ||||||||||||| |||| ||||||  ||||  ||| ||||||||||  ||||| ||||||||||||||||| ||||||||||||||||||||    
T  24319117 tagagctcacacaattaattgtggagaagtggagtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctaccaactgaactaaact 24319019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 15305070 - 15305160
Alignment:
Q  52 tagagttcacacaattaat-gtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactga 141  Q
    ||||| ||||| ||||||| |||| ||| ||  ||||||||  ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  15305070 tagagctcacataattaattgtggagaaatggagtgtttggagttcgaaccccaacacctgcataaattatgcaatgttcctaccaactga 15305160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 32788863 - 32788918
Alignment:
Q  94 ttcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaaact 149  Q
    ||||||||||||||||| |||||||||| |||||  ||||||||||||||||||||    
T  32788863 ttcgaaccccaacccctgcataaattatacaatgaccctaccaactgaactaaact 32788918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 52 - 146
Target Start/End: Original strand, 34432762 - 34432858
Alignment:
Q  52 tagagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||||||||| ||||||  ||||| ||||||  |||| |||| |||||||||||||| || |||| | |||||||| | |||||||||||||||||    
T  34432762 tagagttcacataattaaattgtggagaagtggagtgtctggggttcgaaccccaacctctgcatataatatgcaatatccctaccaactgaactaa 34432858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 138
Target Start/End: Complemental strand, 34268386 - 34268299
Alignment:
Q  52 tagagttcacacaattaat-gtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaac 138  Q
    ||||| ||||||||||||| |||  |||||  |||||| ||| |||||||||  |||||| ||||||||||||||||| |||||||||    
T  34268386 tagagctcacacaattaattgtgaagaagtagggtgttcggggttcgaaccctgacccctgcataaattatgcaatgtccctaccaac 34268299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 32283625 - 32283547
Alignment:
Q  68 aatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    |||||||  |||||| |||| |||| |||||||||| |||| | ||||||||||||||||| |||||||| ||| ||||    
T  32283625 aatgtggaaaagtgaagtgtctggggttcgaaccccgacccttgcataaattatgcaatgtccctaccaattgagctaa 32283547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 52 - 149
Target Start/End: Original strand, 2488853 - 2488950
Alignment:
Q  52 tagagttcacacaattaatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaaact 149  Q
    ||||| ||||||||||||| ||  |||||| | |||  ||| ||||||| || |||||| || ||||||| |||||| |||||||||||| |||||||    
T  2488853 tagagctcacacaattaatatgaagaagtgggatgtccggggttcgaactccgacccctgcagaaattatacaatgtccctaccaactgagctaaact 2488950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 77 - 146
Target Start/End: Original strand, 20568277 - 20568346
Alignment:
Q  77 aagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| |||||| ||| |||||||||| |||||| |||| |||||||||||| | |||||||||| ||||    
T  20568277 aagtggggtgttcggggttcgaaccccgacccctgcatatattatgcaatgtccttaccaactgagctaa 20568346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 97 - 146
Target Start/End: Original strand, 23610331 - 23610380
Alignment:
Q  97 gaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||||| |||||| ||||||||||||||||| |||||||||||| ||||    
T  23610331 gaaccccgacccctgcataaattatgcaatgtccctaccaactgagctaa 23610380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 6210153 - 6210063
Alignment:
Q  58 tcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||||||||||  ||||| ||||||  |||| |||| ||||||||||| ||||| |||| | |||||||| | |||||||||||| ||||    
T  6210153 tcacacaattaaattgtggagaagtggagtgtctggggttcgaaccccagcccctgcatataatatgcaatatccctaccaactgagctaa 6210063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 135
Target Start/End: Complemental strand, 17534945 - 17534867
Alignment:
Q  58 tcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctacc 135  Q
    |||||||||||| ||||| ||||| ||||||  ||  ||||||||||  ||||| ||||||||||||||||| ||||||    
T  17534945 tcacacaattaaatgtggagaagtcaggtgtccggagttcgaaccccggcccctgcataaattatgcaatgtccctacc 17534867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 146
Target Start/End: Original strand, 19374839 - 19374901
Alignment:
Q  84 gtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| ||| ||||||||||||||||| |||| | |||||||| ||||||| |||||| ||||    
T  19374839 gtgttcggggttcgaaccccaacccctgcatataatatgcaatattcctactaactgagctaa 19374901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 144
Target Start/End: Original strand, 22269781 - 22269843
Alignment:
Q  82 aggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaact 144  Q
    ||||||||||| |||||||| |||| ||| |||| ||||| |||||| |||||||||| ||||    
T  22269781 aggtgtttggggttcgaacctcaacacctacatatattatacaatgtccctaccaactaaact 22269843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 91 - 141
Target Start/End: Original strand, 32620077 - 32620127
Alignment:
Q  91 ggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactga 141  Q
    |||||||||||||||| ||| ||||||||||||||||| | || |||||||    
T  32620077 ggattcgaaccccaactcctgcataaattatgcaatgtccatatcaactga 32620127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 146
Target Start/End: Complemental strand, 2426169 - 2426073
Alignment:
Q  52 tagagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| ||||||||||||  ||||| ||||||  ||||  ||| ||||||||||||||| | |||| | |||| ||| |||||||||||||| ||||    
T  2426169 tagagctcacacaattaaattgtggagaagtggagtgtccggggttcgaaccccaacccttgcatataatatgtaatattcctaccaactgagctaa 2426073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 146
Target Start/End: Original strand, 3795739 - 3795835
Alignment:
Q  52 tagagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| ||||||||||||  ||||| ||||||  |||| || | ||||||||||| ||||| |||| | |||||||| | |||||||||||| ||||    
T  3795739 tagagctcacacaattaaattgtggagaagtggagtgtctgaggttcgaaccccagcccctgcatataatatgcaatatccctaccaactgagctaa 3795835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 5757891 - 5757928
Alignment:
Q  77 aagtgaggtgtttgggattcgaaccccaaccccttcat 114  Q
    |||||||||||| ||| |||||||||||||||||||||    
T  5757891 aagtgaggtgttcggggttcgaaccccaaccccttcat 5757928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 146
Target Start/End: Complemental strand, 9435731 - 9435635
Alignment:
Q  52 tagagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| ||||||||||||  ||||| ||||||  ||||  ||| ||||||||||| ||||| |||| | |||||||| | |||||||||||| ||||    
T  9435731 tagagctcacacaattaaattgtggagaagtggagtgtccggggttcgaaccccagcccctgcatataatatgcaatatccctaccaactgagctaa 9435635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 146
Target Start/End: Original strand, 19892241 - 19892337
Alignment:
Q  52 tagagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| || |||||||||  ||||| ||||||  ||||  ||| |||||||||| |||||| |||| | |||||||| | |||||||||||||||||    
T  19892241 tagagctctcacaattaaattgtggagaagtggagtgtccggggttcgaaccccgacccctacatataatatgcaatatccctaccaactgaactaa 19892337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 146
Target Start/End: Original strand, 30885535 - 30885631
Alignment:
Q  52 tagagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||||||||||||||||  ||||| ||| ||  |||| |||| ||||||||||| |||||  ||| | |||||||| | |||||||||||| ||||    
T  30885535 tagagttcacacaattaaattgtggagaaatggagtgtctggggttcgaaccccagcccctgtatataatatgcaatatccctaccaactgagctaa 30885631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 141
Target Start/End: Complemental strand, 32388285 - 32388240
Alignment:
Q  96 cgaaccccaaccccttcataaattatgcaatgttcctaccaactga 141  Q
    |||||||| |||||| ||||||||||||||||| |||| |||||||    
T  32388285 cgaaccccgacccctgcataaattatgcaatgtccctatcaactga 32388240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 70 - 146
Target Start/End: Complemental strand, 15091533 - 15091457
Alignment:
Q  70 tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| |||||| |||||  ||||||||||||||  ||||| |||| | |||||||| | |||||||||||| ||||    
T  15091533 tgtggagaagtggggtgtccgggattcgaaccccggcccctgcatataatatgcaatatccctaccaactgagctaa 15091457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 15963952 - 15964004
Alignment:
Q  94 ttcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||||||||| ||||| |||||| |||||||| | |||||||||||| ||||    
T  15963952 ttcgaaccccagcccctgcataaaatatgcaatatccctaccaactgagctaa 15964004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 28021270 - 28021234
Alignment:
Q  113 ataaattatgcaatgttcctaccaactgaactaaact 149  Q
    |||||||||||||||| |||||||||||| |||||||    
T  28021270 ataaattatgcaatgtccctaccaactgagctaaact 28021234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 62 - 121
Target Start/End: Complemental strand, 31952363 - 31952303
Alignment:
Q  62 acaattaat-gtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattat 121  Q
    ||||||||| |||| |||||| |||||  ||| ||||||||||||||||| ||||||||||    
T  31952363 acaattaattgtggagaagtggggtgtccggggttcgaaccccaacccctgcataaattat 31952303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 32670063 - 32670115
Alignment:
Q  94 ttcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||||||||  ||||| ||||||||||||||| |||||||||| ||| ||||    
T  32670063 ttcgaacccctgcccctgcataaattatgcaatattcctaccaattgagctaa 32670115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 52 - 146
Target Start/End: Complemental strand, 12474085 - 12473991
Alignment:
Q  52 tagagttcacacaattaatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| ||||||||||||||||| |||||| |||||| ||  |||||||  || ||||| |||||||||| ||||||||||||||||||| ||||    
T  12474085 tagagctcacacaattaatgtggagaagtggggtgttcggagttcgaacttcagcccctgcataaattatacaatgttcctaccaactgagctaa 12473991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 91 - 149
Target Start/End: Original strand, 41083543 - 41083601
Alignment:
Q  91 ggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaaact 149  Q
    ||||||||||||| |||||| |||||||||||||||||  ||||||||||| |||||||    
T  41083543 ggattcgaaccccgacccctgcataaattatgcaatgtctctaccaactgagctaaact 41083601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 76 - 149
Target Start/End: Original strand, 436552 - 436625
Alignment:
Q  76 gaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaaact 149  Q
    ||||||||||||| | |||||||||| | |||| | |||||||||| |||||| |||||||||||| |||||||    
T  436552 gaagtgaggtgttcgagattcgaaccgcgacccttgcataaattatacaatgtccctaccaactgagctaaact 436625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 3166042 - 3165998
Alignment:
Q  94 ttcgaaccccaaccccttcataaattatgcaatgttcctaccaac 138  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||    
T  3166042 ttcgaaccccaacccctacataaattatgcaatgtccctaccaac 3165998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 146
Target Start/End: Complemental strand, 32550280 - 32550185
Alignment:
Q  52 tagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| |||||||||||| ||||| | |||| |||||  ||| ||||||||||  ||| | |||||||||||||||||  ||||||||||||||||    
T  32550280 tagagctcacacaattaaatgtggagtagtggggtgtacggggttcgaacccctgcccatgcataaattatgcaatgtctctaccaactgaactaa 32550185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 3198414 - 3198336
Alignment:
Q  68 aatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||||| |||||  |||||  ||| |||||||| |||||||| |||| |||||||||||| |||||||||||| ||||    
T  3198414 aatgtggagaagtagggtgtccggggttcgaacctcaacccctgcatatattatgcaatgtccctaccaactgagctaa 3198336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 125
Target Start/End: Complemental strand, 8571897 - 8571823
Alignment:
Q  52 tagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaa 125  Q
    ||||| |||||||||||| ||||| |||||  |||||| ||| |||||||||| |||||| ||||||||||||||    
T  8571897 tagagctcacacaattaaatgtggagaagtagggtgttcggggttcgaaccccgacccctgcataaattatgcaa 8571823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 91 - 149
Target Start/End: Complemental strand, 11313542 - 11313484
Alignment:
Q  91 ggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaaact 149  Q
    ||||||||||| || ||||| ||||| ||||||||||| ||||||||||||| ||||||    
T  11313542 ggattcgaacctcagcccctacataatttatgcaatgtccctaccaactgaaataaact 11313484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 128
Target Start/End: Original strand, 12053476 - 12053554
Alignment:
Q  51 atagagttcacacaattaat-gtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgt 128  Q
    |||||| ||||||||||||| |||| |||||| ||||| |||| ||||||||||  ||||| |||||| ||||||||||    
T  12053476 atagagctcacacaattaatcgtggagaagtggggtgtctggggttcgaacccctgcccctacataaaatatgcaatgt 12053554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 13462126 - 13462171
Alignment:
Q  97 gaaccccaacccctt-cataaattatgcaatgttcctaccaactga 141  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||    
T  13462126 gaaccccaaccccctgcataaattatgcaatgttcctaccaactga 13462171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 76 - 149
Target Start/End: Complemental strand, 18597488 - 18597415
Alignment:
Q  76 gaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaaact 149  Q
    |||||||||||| ||||  ||||||||||||||||  ||| | |||||||| | |||||||| |||||||||||    
T  18597488 gaagtgaggtgtctgggggtcgaaccccaacccctatatataatatgcaatatccctaccaattgaactaaact 18597415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 52 - 146
Target Start/End: Complemental strand, 18928825 - 18928729
Alignment:
Q  52 tagagttcacacaatt--aatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| ||||||||||  |||||||  |||||||||||  | | ||||||| || |||||| ||||||||||||||| | |||||||||||| ||||    
T  18928825 tagagctcacacaatttaaatgtggaaaagtgaggtgtccgtggttcgaacaccgacccctgcataaattatgcaatatccctaccaactgagctaa 18928729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 149
Target Start/End: Original strand, 8478858 - 8478957
Alignment:
Q  52 tagagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaaact 149  Q
    ||||| ||||||||||||  ||||  ||||||  |||| |||| |||||||| || ||||| |||| | |||||||| | ||||||||||||||||||||    
T  8478858 tagagctcacacaattaaattgtgaagaagtggagtgtatggggttcgaaccacagcccctgcatataatatgcaatatccctaccaactgaactaaact 8478957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 137
Target Start/End: Original strand, 20707752 - 20707839
Alignment:
Q  52 tagagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaa 137  Q
    ||||| |||||||||| |  ||||| ||||||| |||| |||| ||||||||||||||||| |||| | |||||||| | ||||||||    
T  20707752 tagagctcacacaatttaattgtggagaagtgaagtgtctggggttcgaaccccaacccctgcatatagtatgcaatatccctaccaa 20707839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 68 - 147
Target Start/End: Original strand, 28758400 - 28758480
Alignment:
Q  68 aatgtggggaagtgaggtgtttgg-gattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaaa 147  Q
    ||||||| ||||||||||||  || | || ||||||| || ||| ||||||||||||||||| ||||||||||||| ||||    
T  28758400 aatgtggagaagtgaggtgtccggaggtttgaaccccgactcctgcataaattatgcaatgtccctaccaactgaattaaa 28758480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 41127076 - 41127028
Alignment:
Q  98 aaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||||| ||||| ||||||||||||||||||||| |||||||| ||||    
T  41127076 aaccccagcccctgcataaattatgcaatgttcctgccaactgagctaa 41127028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 146
Target Start/End: Original strand, 39800013 - 39800091
Alignment:
Q  68 aatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||||| |||||| |||||  ||| ||||| ||||  ||||| ||||||||||||| ||| |||||||||||| ||||    
T  39800013 aatgtggagaagtggggtgtcaggggttcgagcccctgcccctgcataaattatgcattgtccctaccaactgagctaa 39800091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 4068080 - 4067991
Alignment:
Q  58 tcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    |||||||||||| ||||| |||||| |||||  ||| |||||||| |  ||||| |||||| |||||| ||| |||||||||||| ||||    
T  4068080 tcacacaattaaatgtggagaagtggggtgtccggggttcgaacctcgccccctgcataaaatatgcattgtccctaccaactgagctaa 4067991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 146
Target Start/End: Complemental strand, 36124504 - 36124408
Alignment:
Q  52 tagagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| ||||||| ||||  ||||| ||||||  ||||  |||||||||||||| |||||| |||| | |||||||| |||||| ||||||| ||||    
T  36124504 tagagctcacacagttaaattgtggagaagtggagtgtccgggattcgaaccccgacccctgcatataatatgcaatattcctatcaactgagctaa 36124408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 39165088 - 39165023
Alignment:
Q  84 gtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaaact 149  Q
    |||| |||| ||||||||||| | ||| |||| | |||||||| | ||||||||||||||||||||    
T  39165088 gtgtctggggttcgaaccccagctcctgcatataatatgcaatatccctaccaactgaactaaact 39165023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 91 - 147
Target Start/End: Complemental strand, 12075462 - 12075406
Alignment:
Q  91 ggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaaa 147  Q
    |||||| || ||||||| || ||| ||||||| ||||| ||||||||||||||||||    
T  12075462 ggattcaaatcccaacctctacatgaattatgtaatgtccctaccaactgaactaaa 12075406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 139
Target Start/End: Original strand, 20145530 - 20145618
Alignment:
Q  52 tagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaact 139  Q
    ||||| |||||||||||| ||||| |||||| |||||  | | ||||||||||  ||| | ||||||||||||||| | ||||||||||    
T  20145530 tagagctcacacaattaaatgtggagaagtggggtgtccgaggttcgaaccccggcccttgcataaattatgcaatatccctaccaact 20145618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 35112971 - 35113023
Alignment:
Q  94 ttcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||||||||||||||| |||| | |||||||| | |||| ||||||||||||    
T  35112971 ttcgaaccccaacccctgcatataatatgcaatatccctatcaactgaactaa 35113023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 149
Target Start/End: Original strand, 40276414 - 40276506
Alignment:
Q  58 tcacacaattaat-gtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaaact 149  Q
    ||||||||||||| |||| |||||| || ||  ||| |||||| | || ||||| |||| | |||||||| |||||||||||||| |||||||    
T  40276414 tcacacaattaattgtggagaagtggggcgtccggggttcgaatctcagcccctgcatataatatgcaatattcctaccaactgagctaaact 40276506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 5e-17; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 64 - 149
Target Start/End: Original strand, 32191855 - 32191940
Alignment:
Q  64 aattaatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaaact 149  Q
    ||||||||||| |||||| ||||| |||| ||||||| ||||||||| |||||| |||||| ||| ||||| ||||||||||||||    
T  32191855 aattaatgtggagaagtggggtgtctggggttcgaactccaacccctacataaaatatgcattgtccctacaaactgaactaaact 32191940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 20872431 - 20872519
Alignment:
Q  58 tcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    |||||||||||| |||||| ||||| |||||| ||||||||||| || |||||| ||||||||||||||||| |||| ||||||| ||||    
T  20872431 tcacacaattaaatgtggg-aagtggggtgttcgggattcgaactccgacccctgcataaattatgcaatgtccctatcaactgagctaa 20872519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 52 - 146
Target Start/End: Complemental strand, 12770472 - 12770377
Alignment:
Q  52 tagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| |||||||||||| ||||| |||||| |||||  ||| ||||||||||  ||||| ||||||||||||||||| |||| ||||||| ||||    
T  12770472 tagagctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctatcaactgagctaa 12770377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 52 - 137
Target Start/End: Original strand, 25824868 - 25824954
Alignment:
Q  52 tagagttcacacaatta-atgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaa 137  Q
    ||||| ||||||||||| |||| | |||||| ||||| |||| |||||||||| |||| | ||||||||||||||||| ||||||||    
T  25824868 tagagctcacacaattatatgttgagaagtggggtgtctggggttcgaaccccgacccttgcataaattatgcaatgtccctaccaa 25824954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 30676270 - 30676360
Alignment:
Q  52 tagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactga 141  Q
    ||||| |||||||||||| ||||| ||| || ||||||||||||||||||||  ||| || |||||||||| ||||||  |||||||||||    
T  30676270 tagagctcacacaattaaatgtggagaaatggggtgtttgggattcgaaccctgacctctacataaattatacaatgtctctaccaactga 30676360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 38283228 - 38283138
Alignment:
Q  52 tagagttcacacaatt-aatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactga 141  Q
    |||||||||||||||| ||||||| |||||| ||||| |||| ||||||||||  ||||| ||||||||||  ||||| ||| ||||||||    
T  38283228 tagagttcacacaattaaatgtggagaagtggggtgtctggggttcgaaccccggcccctgcataaattatataatgtccctgccaactga 38283138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 481109 - 481020
Alignment:
Q  58 tcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    |||||||||||| ||||| |||||| |||||  ||| |||||||| |  ||||| ||||||||||||||||| |||||||||||| ||||    
T  481109 tcacacaattaaatgtggagaagtggggtgtccggggttcgaaccgcggcccctgcataaattatgcaatgtccctaccaactgagctaa 481020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 52 - 146
Target Start/End: Complemental strand, 16449230 - 16449134
Alignment:
Q  52 tagagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| ||||||||||||  ||||| ||||||  |||| |||| ||||||||||||||||| |||| | |||||||| | |||||||||||| ||||    
T  16449230 tagagctcacacaattaaattgtggagaagtggagtgtctggggttcgaaccccaacccctgcatataatatgcaatatccctaccaactgagctaa 16449134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 149
Target Start/End: Complemental strand, 10573206 - 10573107
Alignment:
Q  52 tagagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaaact 149  Q
    ||||| || |||||||||  ||||| ||||||  ||||| ||| ||||||||||||||||| |||| | |||||||| | |||||||||||| |||||||    
T  10573206 tagagctcgcacaattaaattgtggagaagtggagtgttcggggttcgaaccccaacccctgcatataatatgcaatatccctaccaactgagctaaact 10573107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 139
Target Start/End: Original strand, 25890370 - 25890458
Alignment:
Q  52 tagagttcacacaattaat-gtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaact 139  Q
    ||||||||| ||||||||| |||| |||||| |||||  ||| ||||||||||  ||| | ||||||||||||||||| ||||||||||    
T  25890370 tagagttcaaacaattaattgtggagaagtggggtgtccggggttcgaaccccggcccttgcataaattatgcaatgtccctaccaact 25890458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 146
Target Start/End: Complemental strand, 5683858 - 5683763
Alignment:
Q  52 tagagttcacaca-attaatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| ||||||| || ||||||| |||||  ||||| |||| ||||||||||||||||| |||| | |||||||| |||||||||| ||| ||||    
T  5683858 tagagctcacacatataaatgtggagaagtagggtgtctggggttcgaaccccaacccctgcatataatatgcaatattcctaccaattgagctaa 5683763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 146
Target Start/End: Original strand, 8698571 - 8698641
Alignment:
Q  76 gaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    |||||| |||||  ||||||||||||||||||||| |||| | |||||||| | |||||||||||| ||||    
T  8698571 gaagtggggtgtccgggattcgaaccccaacccctacatataatatgcaatatccctaccaactgagctaa 8698641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 146
Target Start/End: Original strand, 13059160 - 13059238
Alignment:
Q  68 aatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||||| |||||| |||||  ||| ||||||||||  ||||| ||||||||||||| ||| |||||||||||| ||||    
T  13059160 aatgtggagaagtggggtgtcaggggttcgaacccctgcccctgcataaattatgcattgtccctaccaactgagctaa 13059238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 146
Target Start/End: Original strand, 22437774 - 22437851
Alignment:
Q  68 aatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||||| ||| |||||||| |||| ||||||| | ||||||| ||||||||||||||| | |||||||||||| ||||    
T  22437774 aatgtggagaactgaggtgtctggggttcgaactc-aacccctgcataaattatgcaatatccctaccaactgagctaa 22437851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 40393405 - 40393327
Alignment:
Q  68 aatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||||| |||| | |||||| ||| |||||||||| |||||| ||||||||||||||| ||||| |||| ||| ||||    
T  40393405 aatgtggagaagaggggtgttcggggttcgaaccccgacccctgcataaattatgcaatattcctgccaattgagctaa 40393327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 76 - 141
Target Start/End: Complemental strand, 7948451 - 7948386
Alignment:
Q  76 gaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactga 141  Q
    |||||| |||||| ||||||||||||||||||||| |||| |||||| |||||  ||| |||||||    
T  7948451 gaagtgtggtgttcgggattcgaaccccaacccctgcatatattatgtaatgtctctatcaactga 7948386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 94 - 147
Target Start/End: Complemental strand, 18412617 - 18412564
Alignment:
Q  94 ttcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaaa 147  Q
    ||||||| || |||||| ||||||||||||||||| |||||||||||| |||||    
T  18412617 ttcgaactccgacccctgcataaattatgcaatgtccctaccaactgagctaaa 18412564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 35 - 146
Target Start/End: Original strand, 26192664 - 26192777
Alignment:
Q  35 gtctaatagtctag-ggatagagttcacacaatt-aatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcct 132  Q
    ||||| |||||||| || ||||||||||||| || ||| ||| |||||| |||||  ||| |||||||||| ||| || |||| | |||||||| | |||    
T  26192664 gtctagtagtctagtggctagagttcacacattttaatatggagaagtggggtgtccggggttcgaaccccgacctctgcatataatatgcaatatccct 26192763  T
Q  133 accaactgaactaa 146  Q
    ||||||||||||||    
T  26192764 accaactgaactaa 26192777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 52 - 149
Target Start/End: Complemental strand, 29729224 - 29729124
Alignment:
Q  52 tagagttcacacaattaa--tgtggggaagtgaggtgt-ttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaaac 148  Q
    ||||| ||||||||||||  ||||| ||||||  |||| ||||| ||||||||| |||||||  ||| | |||||||| | |||||||||||||||||||    
T  29729224 tagagctcacacaattaaattgtggagaagtggagtgtcttggggttcgaaccctaacccctgtatataatatgcaatatccctaccaactgaactaaac 29729125  T
Q  149 t 149  Q
    |    
T  29729124 t 29729124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 70 - 146
Target Start/End: Original strand, 27077082 - 27077158
Alignment:
Q  70 tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| |||||| |||||  |||||||||||||| |||||| |||| | |||||||| | |||||||||||| ||||    
T  27077082 tgtggagaagtggggtgtccgggattcgaaccccgacccctgcatataatatgcaatatccctaccaactgagctaa 27077158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 146
Target Start/End: Original strand, 33318063 - 33318143
Alignment:
Q  66 ttaatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    |||||||||  ||||||| |||||||||||||||| || |||||| ||||  ||||| ||| ||||||| |||||| ||||    
T  33318063 ttaatgtggaaaagtgagatgtttgggattcgaacaccgacccctgcatattttatgtaatattcctactaactgagctaa 33318143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 146
Target Start/End: Complemental strand, 39362354 - 39362274
Alignment:
Q  66 ttaatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||||||| |||||| ||||| |||| ||||||| |||||| || |||| | |||||||| | |||||||||||| ||||    
T  39362354 ttaatgtggagaagtggggtgtctggggttcgaactccaacctctgcatataatatgcaatatccctaccaactgagctaa 39362274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 58 - 141
Target Start/End: Complemental strand, 44444642 - 44444558
Alignment:
Q  58 tcacacaattaat-gtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactga 141  Q
    ||||||||||||| |||| |||||| |||||  ||| ||||||||||| ||||| |||| | |||||||| | ||||||||||||    
T  44444642 tcacacaattaattgtggagaagtggggtgtccggggttcgaaccccagcccctgcatataatatgcaatatccctaccaactga 44444558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 92 - 139
Target Start/End: Complemental strand, 550364 - 550317
Alignment:
Q  92 gattcgaaccccaaccccttcataaattatgcaatgttcctaccaact 139  Q
    |||||||||||| |||||| ||||||||||||||||| ||| ||||||    
T  550364 gattcgaaccccgacccctgcataaattatgcaatgtccctgccaact 550317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 146
Target Start/End: Complemental strand, 11231524 - 11231429
Alignment:
Q  52 tagagttcacacaattaat-gtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| ||||||||||||| || | |||||| |||||  ||| ||||||||||  ||||| ||||||||||||||||| |||  ||||||| ||||    
T  11231524 tagagctcacacaattaattgtcgagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctttcaactgagctaa 11231429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 146
Target Start/End: Original strand, 25812175 - 25812270
Alignment:
Q  52 tagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| |||||||||||| ||| | |||||| ||||| |||| ||||||||||   |||| ||||||||||||||||| ||| |||| ||| ||||    
T  25812175 tagagctcacacaattaaatgttgagaagtggggtgtctggggttcgaaccccggaccctccataaattatgcaatgtccctgccaattgagctaa 25812270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 20894665 - 20894754
Alignment:
Q  52 tagagttcacacaattaat-gtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactga 141  Q
    ||||| ||||||||||||| |||| |||||||| ||| || | ||||||||||  ||| | ||||||||||||||||| ||| ||||||||    
T  20894665 tagagctcacacaattaattgtggagaagtgagatgtctgag-ttcgaaccccggcccttgcataaattatgcaatgtccctgccaactga 20894754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 149
Target Start/End: Original strand, 22274577 - 22274675
Alignment:
Q  52 tagagttcacacaattaat-gtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaaact 149  Q
    ||||| ||||||||||||| |||| |||||| |||||  ||| ||||||||||  | ||| |||| | |||||||| | |||||||||||| |||||||    
T  22274577 tagagctcacacaattaattgtggagaagtggggtgtccggggttcgaaccccggctcctgcatataatatgcaatatccctaccaactgagctaaact 22274675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 43847039 - 43846949
Alignment:
Q  52 tagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactga 141  Q
    ||||| |||||||||||| ||||| |||||| |||||   || |||||||  | |||||| |||||||||||||||||||||  |||||||    
T  43847039 tagagctcacacaattaaatgtggagaagtggggtgtccagggttcgaacatcgacccctgcataaattatgcaatgttcctgtcaactga 43846949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 137
Target Start/End: Original strand, 6851009 - 6851078
Alignment:
Q  68 aatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaa 137  Q
    ||||||| ||||| ||||||  ||| |||||| ||| |||||| |||||||||||||||||  |||||||    
T  6851009 aatgtggagaagtaaggtgtccggggttcgaatccctacccctgcataaattatgcaatgtctctaccaa 6851078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 141
Target Start/End: Complemental strand, 22202799 - 22202727
Alignment:
Q  68 aatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactga 141  Q
    |||||||  ||||| |||||||||| ||  || |||||| ||| ||||||||||||||||| ||||||||||||    
T  22202799 aatgtggaaaagtggggtgtttgggttta-aatcccaactcctgcataaattatgcaatgtccctaccaactga 22202727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 146
Target Start/End: Complemental strand, 26022352 - 26022256
Alignment:
Q  52 tagagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| ||||||||||||  ||||| ||||||  |||| |||| ||||||||||  ||||| |||| | |||||||| | |||||||||||| ||||    
T  26022352 tagaggtcacacaattaaattgtggagaagtggagtgtctggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactgagctaa 26022256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 70 - 146
Target Start/End: Original strand, 5328552 - 5328628
Alignment:
Q  70 tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| ||||||||||||  ||| ||||||||||  ||||| |||| | |||||||| | |||||||||||| ||||    
T  5328552 tgtggagaagtgaggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactgagctaa 5328628  T

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Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 141
Target Start/End: Complemental strand, 14583286 - 14583210
Alignment:
Q  66 ttaatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgca-atgttcctaccaactga 141  Q
    ||||||||| |||||| |||||| | | ||||||||||| ||||| |||| ||||||||  ||| ||||||||||||    
T  14583286 ttaatgtggagaagtggggtgttcgtggttcgaaccccagcccctgcatatattatgcatttgtccctaccaactga 14583210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 93 - 149
Target Start/End: Complemental strand, 26797020 - 26796964
Alignment:
Q  93 attcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaaact 149  Q
    ||||||||| ||  |||| |||||| |||||||||| |||||||||||| |||||||    
T  26797020 attcgaacctcagtccctgcataaaatatgcaatgtccctaccaactgagctaaact 26796964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 41272155 - 41272115
Alignment:
Q  94 ttcgaaccccaaccccttcataaattatgcaatgttcctac 134  Q
    ||||||||||| ||||| ||||||||||||||||| |||||    
T  41272155 ttcgaaccccagcccctgcataaattatgcaatgtccctac 41272115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 52 - 146
Target Start/End: Complemental strand, 15109 - 15014
Alignment:
Q  52 tagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| ||||| |||||| ||||| |||||| |||||||||| ||||||||   |||||| ||||||||||||||||| |||||||||||| ||||    
T  15109 tagagctcacataattaaatgtggagaagtggggtgtttggggttcgaaccatgacccctgcataaattatgcaatgtccctaccaactgagctaa 15014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 7e-16; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 52 - 146
Target Start/End: Complemental strand, 4611342 - 4611248
Alignment:
Q  52 tagagttcacacaattaat-gtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| ||||||||||||| |||| |||||| ||||| || | ||||||||||| ||||| ||||||||||||||||| |||||||||||| ||||    
T  4611342 tagagctcacacaattaattgtggagaagtg-ggtgtctgtggttcgaaccccagcccctacataaattatgcaatgtccctaccaactgagctaa 4611248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 12935844 - 12935754
Alignment:
Q  52 tagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactga 141  Q
    ||||| |||||||||||| ||||| |||||| || || |||| ||||||||||| ||||| ||||||||||||||||| ||| ||||||||    
T  12935844 tagagctcacacaattaaatgtggagaagtggggcgtctggggttcgaaccccatcccctacataaattatgcaatgtccctgccaactga 12935754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 41331051 - 41331140
Alignment:
Q  58 tcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    |||||||||||| ||||| |||||| |||||  || ||||||||||| |||||| ||||||||||||||||| ||| |||||||| ||||    
T  41331051 tcacacaattaaatgtggagaagtggggtgtccggaattcgaaccccgacccctgcataaattatgcaatgtccctgccaactgagctaa 41331140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 40518861 - 40518950
Alignment:
Q  58 tcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    |||||||||||| ||||| |||||| |||||  ||  |||||| |||||||||| |||| |||||||||||| |||||||||||| ||||    
T  40518861 tcacacaattaaatgtggagaagtggggtgtccggagttcgaatcccaacccctacatatattatgcaatgtccctaccaactgagctaa 40518950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 146
Target Start/End: Complemental strand, 38151448 - 38151353
Alignment:
Q  52 tagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| |||||||||||| ||||| |||||| ||||||   | |||||||||| |||||| ||||||| ||||||| | |||||||||||| ||||    
T  38151448 tagagctcacacaattaaatgtggagaagtggggtgttcatggttcgaaccccgacccctgcataaataatgcaatatccctaccaactgagctaa 38151353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 149
Target Start/End: Complemental strand, 47438038 - 47437940
Alignment:
Q  52 tagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaaact 149  Q
    ||||| ||||||| |||| ||||| ||||||  ||||  ||| || |||||||  ||||| |||||||||||||||||||||||||||| | |||||||    
T  47438038 tagagctcacacagttaaatgtggagaagtggagtgtccggggtttgaacccctgcccctgcataaattatgcaatgttcctaccaactaagctaaact 47437940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 92 - 141
Target Start/End: Original strand, 7664196 - 7664245
Alignment:
Q  92 gattcgaaccccaaccccttcataaattatgcaatgttcctaccaactga 141  Q
    |||||||| ||| |||||| ||||||||||||||||||| ||||||||||    
T  7664196 gattcgaaacccgacccctgcataaattatgcaatgttcataccaactga 7664245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 68 - 141
Target Start/End: Complemental strand, 22548298 - 22548225
Alignment:
Q  68 aatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactga 141  Q
    ||||||| |||||| |||||| ||| |||||||||  ||||||  |||||||||||||||| | ||||||||||    
T  22548298 aatgtggagaagtggggtgttcggggttcgaaccctgacccctgtataaattatgcaatgtccttaccaactga 22548225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 139
Target Start/End: Complemental strand, 4886942 - 4886856
Alignment:
Q  52 tagagttcacacaatta-atgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaact 139  Q
    ||||||||||||||||| |||||| |||||| |||||  || ||||||||||| |||| | |||||||||||| ||| |||||||||||    
T  4886942 tagagttcacacaattatatgtggagaagtggggtgtccgg-attcgaaccccgacccttgcataaattatgccatg-tcctaccaact 4886856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 51 - 146
Target Start/End: Complemental strand, 36932078 - 36931982
Alignment:
Q  51 atagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    |||||| |||||||||||| ||| | |||||| |||||  ||| ||||||||||   |||| ||||||||||||||||| ||| |||||||| ||||    
T  36932078 atagagctcacacaattaaatgtagagaagtggggtgtccggggttcgaaccccggaccctgcataaattatgcaatgtccctgccaactgagctaa 36931982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 27704308 - 27704355
Alignment:
Q  94 ttcgaaccccaaccccttcataaattatgcaatgttcctaccaactga 141  Q
    ||||||||||||||||| |||| | |||||||| ||||||||||||||    
T  27704308 ttcgaaccccaacccctgcatataatatgcaatattcctaccaactga 27704355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 3532649 - 3532587
Alignment:
Q  84 gtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||||||| |||||||| |  ||||| |||| |||||||||| | |||||||||||||||||    
T  3532649 gtgtttggggttcgaacctcggcccctgcatatattatgcaatatccctaccaactgaactaa 3532587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 149
Target Start/End: Complemental strand, 10901732 - 10901650
Alignment:
Q  68 aatgtggggaagtgaggtgtttgggattcgaaccccaa-ccccttcataaattatgcaatgttcctaccaactgaactaaact 149  Q
    ||||||| |||||| |||||| ||| |||||||| | | ||||| ||||||||||||||||| | |  |||||||||||||||    
T  10901732 aatgtggagaagtggggtgttaggggttcgaaccgctatcccctgcataaattatgcaatgtccatgtcaactgaactaaact 10901650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 149
Target Start/End: Complemental strand, 21066990 - 21066892
Alignment:
Q  52 tagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaaact 149  Q
    ||||| || ||||||||| ||||| |||||||| |||  ||| ||||||||||  ||||| |||| | |||||||| | |||||||||||| |||||||    
T  21066990 tagagctcgcacaattaaatgtggagaagtgagatgtccggggttcgaaccccggcccctacatataatatgcaatatccctaccaactgagctaaact 21066892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 126
Target Start/End: Complemental strand, 27788356 - 27788298
Alignment:
Q  68 aatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaat 126  Q
    ||||||| |||||| ||||| |||| ||||||||||  ||||| |||||||||||||||    
T  27788356 aatgtggagaagtggggtgtctggggttcgaaccccggcccctgcataaattatgcaat 27788298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 126
Target Start/End: Complemental strand, 27791512 - 27791454
Alignment:
Q  68 aatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaat 126  Q
    ||||||| |||||| ||||| |||| ||||||||||  ||||| |||||||||||||||    
T  27791512 aatgtggagaagtggggtgtctggggttcgaaccccggcccctgcataaattatgcaat 27791454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 138
Target Start/End: Complemental strand, 9497740 - 9497695
Alignment:
Q  93 attcgaaccccaaccccttcataaattatgcaatgttcctaccaac 138  Q
    ||||||||||||||||||  |||||||||||||| | |||||||||    
T  9497740 attcgaaccccaacccctatataaattatgcaatatccctaccaac 9497695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 142
Target Start/End: Original strand, 22610049 - 22610086
Alignment:
Q  105 accccttcataaattatgcaatgttcctaccaactgaa 142  Q
    |||||| |||||||||||||||||||||||||| ||||    
T  22610049 acccctgcataaattatgcaatgttcctaccaattgaa 22610086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 146
Target Start/End: Original strand, 34267516 - 34267612
Alignment:
Q  52 tagagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| |||||||||| |  ||||| ||||||| ||||  ||| ||||||||||| | ||| |||| | |||||||| |||||||||||||| ||||    
T  34267516 tagagctcacacaatttaattgtggagaagtgaagtgtccggggttcgaaccccagctcctgcatataatatgcaatattcctaccaactgagctaa 34267612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 37411720 - 37411801
Alignment:
Q  68 aatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaaact 149  Q
    ||||||| |||||| |||||  ||  ||| ||| || |||||| ||||||||||||||||| |||||||| ||| |||||||    
T  37411720 aatgtggagaagtggggtgtccggagttcaaactccgacccctgcataaattatgcaatgtccctaccaattgagctaaact 37411801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 141
Target Start/End: Complemental strand, 37917467 - 37917403
Alignment:
Q  77 aagtgaggtgtttgggattcgaaccccaaccccttcata-aattatgcaatgttcctaccaactga 141  Q
    ||||| ||||||| || || |||||||||||||| |||| |||||||| |||||||||||||||||    
T  37917467 aagtggggtgtttagggtttgaaccccaacccctgcatataattatgc-atgttcctaccaactga 37917403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 146
Target Start/End: Original strand, 44831641 - 44831682
Alignment:
Q  105 accccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    |||||| ||||||||||||||||| |||||||||||| ||||    
T  44831641 acccctgcataaattatgcaatgtccctaccaactgatctaa 44831682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 126
Target Start/End: Original strand, 47194396 - 47194465
Alignment:
Q  58 tcacacaattaat-gtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaat 126  Q
    ||||||||||||| |||| |||||| ||||||||||||| ||||||| | |||| |||| ||||| ||||    
T  47194396 tcacacaattaattgtggagaagtggggtgtttgggatttgaaccccgatccctacatatattatacaat 47194465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 146
Target Start/End: Complemental strand, 47641142 - 47641054
Alignment:
Q  60 acacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||||||||  ||||| ||||||  |||| |||| ||||||||||| ||||| |||| | |||||||| | |||||||||||| ||||    
T  47641142 acacaattaaattgtggagaagtggagtgtctggggttcgaaccccagcccctacatataatatgcaatatccctaccaactgagctaa 47641054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 146
Target Start/End: Complemental strand, 48719904 - 48719808
Alignment:
Q  52 tagagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| ||||||||||||  ||||| ||||||  |||| |||| ||||||||||  | ||| |||| | |||||||| |||||||||||||| ||||    
T  48719904 tagagctcacacaattaaattgtggagaagtggagtgtctggggttcgaaccccggctcctgcatataatatgcaatattcctaccaactgagctaa 48719808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 115
Target Start/End: Original strand, 2846014 - 2846090
Alignment:
Q  41 tagtctag-ggatagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcata 115  Q
    |||||||| |||||||| ||||| |||||| ||||| |||||| ||||| | || ||||||||||||||||| ||||    
T  2846014 tagtctagtggatagagatcacataattaaatgtggagaagtggggtgtcttgggttcgaaccccaacccctacata 2846090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 133
Target Start/End: Original strand, 12007767 - 12007842
Alignment:
Q  58 tcacacaattaat-gtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttccta 133  Q
    ||||||||||||| |||| |||||||| |||  ||| ||||||||||| ||||| |||||||||| |||||| ||||    
T  12007767 tcacacaattaattgtggagaagtgag-tgtccggggttcgaaccccagcccctgcataaattatacaatgtcccta 12007842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 139
Target Start/End: Original strand, 23274780 - 23274868
Alignment:
Q  52 tagagttcacacaattaat-gtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaact 139  Q
    ||||| ||||||||||||| ||||  || || |||||  ||| ||||||| ||  ||||| ||||||||||||||||| ||||||||||    
T  23274780 tagagctcacacaattaattgtggaaaaatggggtgtccggggttcgaactccggcccctgcataaattatgcaatgtccctaccaact 23274868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 27159745 - 27159705
Alignment:
Q  106 ccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| ||||||||||||||||| |||||||| ||||||||    
T  27159745 cccctgcataaattatgcaatgtccctaccaattgaactaa 27159705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 146
Target Start/End: Complemental strand, 41084112 - 41084048
Alignment:
Q  82 aggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    |||| |||||| |||||||||| |||||| |||| | |||||||| | |||||||||||| ||||    
T  41084112 aggtatttggggttcgaaccccgacccctgcatataatatgcaatatccctaccaactgagctaa 41084048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 146
Target Start/End: Original strand, 47542981 - 47543037
Alignment:
Q  90 gggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    |||||||||||||   ||||| ||||||||||||||||  |||||||||||| ||||    
T  47542981 gggattcgaaccctggcccctgcataaattatgcaatgcccctaccaactgagctaa 47543037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 7e-16; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 52 - 146
Target Start/End: Complemental strand, 2629683 - 2629588
Alignment:
Q  52 tagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| |||||||||||| ||||| |||||| |||||| ||| |||||||||| |||||| ||||||||||||||||| ||| |||| ||| ||||    
T  2629683 tagagctcacacaattaaatgtggagaagtggggtgttcggggttcgaaccccgacccctgcataaattatgcaatgtccctgccaattgagctaa 2629588  T

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Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 31890843 - 31890753
Alignment:
Q  52 tagagttcacacaattaat-gtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactga 141  Q
    ||||| || |||||||||| |||| |||||| |||||||| | || |||||||||||| | ||||||||||| ||||||||||||||||||    
T  31890843 tagagctcgcacaattaattgtggagaagtggggtgtttgaggtttgaaccccaacccttacataaattatgtaatgttcctaccaactga 31890753  T

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Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 51890920 - 51890806
Alignment:
Q  34 ggtctaatagtctag-ggatagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcc 131  Q
    |||||||||| |||| || ||||| |||||||||||| ||||| |||||| |||||  ||| ||||||||||  ||||| ||||||||||||||||| ||    
T  51890920 ggtctaatagcctagtggctagagctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccc 51890821  T
Q  132 taccaactgaactaa 146  Q
    | |||||||| ||||    
T  51890820 tgccaactgagctaa 51890806  T

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Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 45139853 - 45139942
Alignment:
Q  58 tcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    |||||||||||| ||||| ||||||||||||  ||| ||||||||||  ||||| |||||||||| |||||| |||||||||||| ||||    
T  45139853 tcacacaattaaatgtggagaagtgaggtgtccggggttcgaaccccggcccctgcataaattatacaatgtccctaccaactgagctaa 45139942  T

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Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 52 - 134
Target Start/End: Original strand, 32287506 - 32287589
Alignment:
Q  52 tagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctac 134  Q
    ||||| |||||||||||| | ||| |||||| |||||||||| ||| ||| ||||||||| ||||||||||||||||| |||||    
T  32287506 tagagatcacacaattaaatatggagaagtggggtgtttggggttcaaactccaacccctgcataaattatgcaatgtccctac 32287589  T

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Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 76 - 141
Target Start/End: Original strand, 41137911 - 41137976
Alignment:
Q  76 gaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactga 141  Q
    |||||| ||||| || | ||||||||||||||||| |||| |||||||||||| ||||||||||||    
T  41137911 gaagtggggtgtctgtggttcgaaccccaacccctgcatatattatgcaatgtccctaccaactga 41137976  T

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Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 141
Target Start/End: Complemental strand, 12625951 - 12625843
Alignment:
Q  35 gtctaatagtctag-ggatagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcct 132  Q
    ||||||||| |||| || |||||||||||||||||| ||||| |||||| |||||  ||  ||||||| || |||||| |||||||||||||| || | |    
T  12625951 gtctaatagcctagtggctagagttcacacaattaaatgtggagaagtggggtgtccggtgttcgaactccgacccctgcataaattatgcaacgtcctt 12625852  T
Q  133 accaactga 141  Q
    |||||||||    
T  12625851 accaactga 12625843  T

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Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 13734961 - 13735009
Alignment:
Q  85 tgtttgggattcgaaccccaaccccttcataaattatgcaatgttccta 133  Q
    |||| ||||||||||||||||||||| ||||||||||||||||| ||||    
T  13734961 tgttcgggattcgaaccccaacccctgcataaattatgcaatgtcccta 13735009  T

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Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 137
Target Start/End: Original strand, 23924820 - 23924924
Alignment:
Q  35 gtctaatagtctag-ggatagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcct 132  Q
    ||||||||| |||| || ||||| |||||||| ||| ||||| ||||||| ||||  ||| ||||||||||  ||||| ||||||||||||||||| |||    
T  23924820 gtctaatagcctagtggctagagctcacacaaataaatgtggagaagtgaagtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccct 23924919  T
Q  133 accaa 137  Q
    |||||    
T  23924920 accaa 23924924  T

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Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 139
Target Start/End: Original strand, 28465740 - 28465828
Alignment:
Q  52 tagagttcacacaattaat-gtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaact 139  Q
    ||||| ||||||||||||| |||| |||||||||||| |||  |||||||||| ||||||  || ||||||||||||| |||| |||||    
T  28465740 tagagctcacacaattaattgtggagaagtgaggtgtctggagttcgaaccccgacccctagattaattatgcaatgtccctatcaact 28465828  T

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Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 141
Target Start/End: Complemental strand, 26250712 - 26250661
Alignment:
Q  90 gggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactga 141  Q
    ||||||||||||||  ||||| ||||||||||||||||| ||||||||||||    
T  26250712 gggattcgaaccccggcccctgcataaattatgcaatgtccctaccaactga 26250661  T

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Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 137
Target Start/End: Complemental strand, 24704232 - 24704147
Alignment:
Q  52 tagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaa 137  Q
    |||||||| ||||||||| ||||| |||||||| |||   || ||||||| || |||||| ||||||||||||||||||||||||||    
T  24704232 tagagttcgcacaattaaatgtggagaagtgag-tgtccagggttcgaactccgacccctgcataaattatgcaatgttcctaccaa 24704147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 128
Target Start/End: Complemental strand, 42664102 - 42664008
Alignment:
Q  36 tctaatagtctag-ggatagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgt 128  Q
    |||| |||||||| || ||||| |||||||||||| ||||| |||||| |||||   ||||||||||||||||| || | |||||||||||||||    
T  42664102 tctagtagtctagtggctagagctcacacaattaaatgtggagaagtggggtgtccaggattcgaaccccaacctctgcgtaaattatgcaatgt 42664008  T

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Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 68 - 141
Target Start/End: Complemental strand, 624567 - 624494
Alignment:
Q  68 aatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactga 141  Q
    ||||||| |||||| |||||  ||| ||||||||||  ||||| ||||||||||||||||| | ||||||||||    
T  624567 aatgtggagaagtggggtgtcaggggttcgaacccctgcccctgcataaattatgcaatgtccttaccaactga 624494  T

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Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 58 - 130
Target Start/End: Complemental strand, 13089007 - 13088934
Alignment:
Q  58 tcacacaatt-aatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttc 130  Q
    |||||||||| |||||||  ||||| |||||  | |||||||||||| |||||| |||||||||||||||||||    
T  13089007 tcacacaatttaatgtggaaaagtggggtgtccgagattcgaaccccgacccctgcataaattatgcaatgttc 13088934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 52 - 149
Target Start/End: Original strand, 27091439 - 27091536
Alignment:
Q  52 tagagttcacacaattaatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaaact 149  Q
    ||||| ||||||||||||| ||  |||||| | |||  ||| ||||||| || |||||| || ||||||| |||||| |||||||||||| |||||||    
T  27091439 tagagctcacacaattaatatgaagaagtgggatgtccggggttcgaactccgacccctgcagaaattatacaatgtccctaccaactgagctaaact 27091536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 29406455 - 29406366
Alignment:
Q  58 tcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    |||||||||||| ||||| |||||| | |||  ||  |||||||||| |||||| ||||||||||||||||| |||||||| ||| ||||    
T  29406455 tcacacaattaaatgtggagaagtgggttgtccggagttcgaaccccgacccctgcataaattatgcaatgtccctaccaattgagctaa 29406366  T

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Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 52 - 146
Target Start/End: Complemental strand, 40051727 - 40051631
Alignment:
Q  52 tagagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| |||||||||| |  ||||| |||||| ||||| |||| |||||||||| |||||| |||| | |||||||| | |||||||||||| ||||    
T  40051727 tagagctcacacaatttaattgtggagaagtggggtgtctggggttcgaacccctacccctacatataatatgcaatatccctaccaactgagctaa 40051631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 52 - 146
Target Start/End: Original strand, 48569141 - 48569237
Alignment:
Q  52 tagagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| ||||||||||||  ||||| ||||||  |||| |||| ||||||||||| ||||| |||| | |||||||| | |||||||||||| ||||    
T  48569141 tagagctcacacaattaaattgtggagaagtggagtgtctggggttcgaaccccagcccctgcatataatatgcaatatccctaccaactgagctaa 48569237  T

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Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 52 - 146
Target Start/End: Complemental strand, 55021659 - 55021563
Alignment:
Q  52 tagagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| |||||||||| |  ||||| ||||||| ||||  ||| |||||||||| |||||| |||| | |||||||| |||||||||||||| ||||    
T  55021659 tagagctcacacaatttaattgtggagaagtgaagtgtccggggttcgaaccccgacccctgcatataatatgcaatattcctaccaactgagctaa 55021563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 58 - 137
Target Start/End: Original strand, 6170941 - 6171021
Alignment:
Q  58 tcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaa 137  Q
    |||||||||||| ||||| |||||   |||| || | ||||||||||| ||||| ||||||||||||||||| ||||||||    
T  6170941 tcacacaattaaatgtggagaagtagagtgtctgaggttcgaaccccagcccctacataaattatgcaatgtccctaccaa 6171021  T

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Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 139
Target Start/End: Complemental strand, 42002410 - 42002322
Alignment:
Q  52 tagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaact 139  Q
    ||||| |||||||||||| ||||| |||||| ||||| || | ||| |||| |  ||||| ||||||||||||||||| ||||||||||    
T  42002410 tagagctcacacaattaaatgtggagaagtggggtgtctgaggttcaaaccacggcccctacataaattatgcaatgtccctaccaact 42002322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 141
Target Start/End: Original strand, 50376641 - 50376705
Alignment:
Q  77 aagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactga 141  Q
    |||||| ||||||||| ||||||||||  ||||| |||| ||||||||||||  |||||||||||    
T  50376641 aagtgaagtgtttggggttcgaaccccttcccctgcatatattatgcaatgtctctaccaactga 50376705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 146
Target Start/End: Complemental strand, 42081839 - 42081744
Alignment:
Q  52 tagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| |||||||||||| ||||| ||||||  ||||    ||||||||||||| ||||| ||||||||||||||| |  || |||||||||||||    
T  42081839 tagagctcacacaattaaatgtggagaagtggagtgtccaagattcgaaccccagcccctacataaattatgcaatatctctgccaactgaactaa 42081744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 146
Target Start/End: Original strand, 47678560 - 47678654
Alignment:
Q  52 tagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    |||| ||||||||||||| | ||| ||| || |||||| ||| ||||||  || ||||||  |||||||||||||||| |||||||||||||||||    
T  47678560 tagaattcacacaattaaatatggagaattggggtgttcggg-ttcgaattccgacccctatataaattatgcaatgtccctaccaactgaactaa 47678654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 43539899 - 43539821
Alignment:
Q  68 aatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||||| |||||| ||||| | | ||||||||| || ||||| |||| |||||| | ||| |||||||||||||||||    
T  43539899 aatgtggagaagtggggtgtctagaattcgaacctcagcccctacatatattatgtattgtccctaccaactgaactaa 43539821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 50512447 - 50512369
Alignment:
Q  68 aatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||||| ||||| ||||||  | | |||||||| |||||||| |||| | |||||||| |||||||||||||| ||||    
T  50512447 aatgtggagaagtaaggtgtcagaggttcgaacctcaacccctgcatataatatgcaatattcctaccaactgagctaa 50512369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 137
Target Start/End: Original strand, 11294821 - 11294890
Alignment:
Q  68 aatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaa 137  Q
    ||||||| |||||| |||||  ||| ||||||||||  ||||| ||||||||||||||||| ||| ||||    
T  11294821 aatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctgccaa 11294890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 146
Target Start/End: Complemental strand, 37935966 - 37935870
Alignment:
Q  52 tagagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| ||||||||||||  ||||| ||||||  |||| |||  ||||||||||| ||||| |||| | |||||||| | |||||||||||| ||||    
T  37935966 tagagctcacacaattaaattgtggagaagtgttgtgtctggagttcgaaccccagcccctgcatataatatgcaatatccctaccaactgagctaa 37935870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 146
Target Start/End: Original strand, 40994068 - 40994164
Alignment:
Q  52 tagagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| |||||||||| |  ||||| ||||||  ||||  ||||||||||||||||| ||| |||| | |||||||| | |||||||||||| ||||    
T  40994068 tagagctcacacaatttaattgtggagaagtggagtgtccgggattcgaaccccaactcctacatataatatgcaatatccctaccaactgagctaa 40994164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 146
Target Start/End: Original strand, 17815430 - 17815486
Alignment:
Q  90 gggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    |||||||||||||| |||||| |||| | |||| ||| | |||||||||||||||||    
T  17815430 gggattcgaaccccgacccctgcatataatatgtaatatccctaccaactgaactaa 17815486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 141
Target Start/End: Original strand, 22433391 - 22433427
Alignment:
Q  105 accccttcataaattatgcaatgttcctaccaactga 141  Q
    ||||||||||| ||||||||||||||||| |||||||    
T  22433391 accccttcatatattatgcaatgttcctatcaactga 22433427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 137
Target Start/End: Original strand, 23778790 - 23778877
Alignment:
Q  52 tagagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaa 137  Q
    ||||| |||||||||| |  ||||| |||||| ||||| |||| ||||||||||||||||| |||| | |||| ||| | ||||||||    
T  23778790 tagagctcacacaatttaattgtggagaagtggggtgtctggggttcgaaccccaacccctgcatataatatgtaatatccctaccaa 23778877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 139
Target Start/End: Original strand, 25235768 - 25235851
Alignment:
Q  58 tcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaact 139  Q
    ||||||||||||  ||||| ||||||  |||| |||| ||||||||||| ||||| |||| | |||||||| | ||||||||||    
T  25235768 tcacacaattaaattgtggagaagtggagtgtctggggttcgaaccccagcccctgcatataatatgcaatatccctaccaact 25235851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 70 - 146
Target Start/End: Complemental strand, 34932580 - 34932504
Alignment:
Q  70 tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| |||||  |||||||||| |||||||||| |||||| |||| |   |||||| |||||||||||||| ||||    
T  34932580 tgtggagaagtagggtgtttggggttcgaaccccgacccctacatataacgtgcaatattcctaccaactgagctaa 34932504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 97 - 149
Target Start/End: Original strand, 43627273 - 43627325
Alignment:
Q  97 gaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaaact 149  Q
    ||||||| |||||| |||||||||||||||||   || |||||||||||||||    
T  43627273 gaaccccgacccctgcataaattatgcaatgtctatatcaactgaactaaact 43627325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 50279049 - 50279101
Alignment:
Q  94 ttcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    |||| |||||| ||| | ||||||||||||||||| |||||||||||| ||||    
T  50279049 ttcggaccccagcccttgcataaattatgcaatgtccctaccaactgagctaa 50279101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 52757287 - 52757339
Alignment:
Q  94 ttcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||||||||||||||| |||| | |||||||| ||||| |||||||| ||||    
T  52757287 ttcgaaccccaacccctgcatataatatgcaatattcctgccaactgagctaa 52757339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 7e-16; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 66 - 141
Target Start/End: Original strand, 23653197 - 23653272
Alignment:
Q  66 ttaatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactga 141  Q
    |||||||||  |||||||||||| ||| |||||||||| |||||| |||| |||||||||||||| ||||||||||    
T  23653197 ttaatgtggataagtgaggtgttcggggttcgaaccccgacccctgcatatattatgcaatgttcttaccaactga 23653272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 68 - 147
Target Start/End: Complemental strand, 38949761 - 38949682
Alignment:
Q  68 aatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaaa 147  Q
    ||||||| |||||| |||||| ||| ||||||||||  ||||| ||||||||||||||||| |||||||||||| |||||    
T  38949761 aatgtggagaagtggggtgttcggggttcgaaccccggcccctgcataaattatgcaatgtccctaccaactgagctaaa 38949682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 52 - 149
Target Start/End: Original strand, 4227710 - 4227808
Alignment:
Q  52 tagagttcacacaattaatg-tggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaaact 149  Q
    ||||| |||||||||||||  ||| |||||| |||||  ||  |||||||||| |||||| ||||||||||||||||| |||||||||||| |||||||    
T  4227710 tagagctcacacaattaattatggagaagtggggtgtccggagttcgaaccccgacccctgcataaattatgcaatgtccctaccaactgagctaaact 4227808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 29531318 - 29531228
Alignment:
Q  52 tagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactga 141  Q
    ||||| |||||||||||| ||||| ||||||||||  |  ||  ||||||||| |||||||||||||||||||||||||| ||||||||||    
T  29531318 tagagctcacacaattaaatgtggagaagtgaggttgtccggggtcgaaccccgaccccttcataaattatgcaatgttcataccaactga 29531228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 52 - 146
Target Start/End: Complemental strand, 32776316 - 32776220
Alignment:
Q  52 tagagttcacacaattaatgtgggga--agtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| ||||||||||||  ||||||  ||||||||||  ||| ||||||||||  ||||| ||||||||||||||||| |||||||||||| ||||    
T  32776316 tagagctcacacaattaaattggggagaagtgaggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctaccaactgagctaa 32776220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 36 - 146
Target Start/End: Complemental strand, 24303511 - 24303399
Alignment:
Q  36 tctaatagtctag-ggatagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttccta 133  Q
    |||||||| |||| || ||||| |||||||||||| ||||| |||||| |||||  ||| ||||||||||  ||||| ||||||||||||||||| |||     
T  24303511 tctaatagcctagtggctagagctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctg 24303412  T
Q  134 ccaactgaactaa 146  Q
    |||||||| ||||    
T  24303411 ccaactgagctaa 24303399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 52 - 138
Target Start/End: Original strand, 5173976 - 5174063
Alignment:
Q  52 tagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaac 138  Q
    ||||| |||||||||||| ||||| |||||| |||||| ||| ||||||||||  ||||| |||||||||||||||||  ||||||||    
T  5173976 tagagctcacacaattaaatgtggagaagtggggtgttcggggttcgaacccctgcccctgcataaattatgcaatgtctctaccaac 5174063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 60 - 146
Target Start/End: Original strand, 49983682 - 49983769
Alignment:
Q  60 acacaattaat-gtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||||||||| |||| |||||  |||||  ||| ||||||||||||||||| |||||||||| |||||| |||||||||||| ||||    
T  49983682 acacaattaattgtggagaagtagggtgtccggggttcgaaccccaacccctgcataaattatacaatgtccctaccaactgagctaa 49983769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 138
Target Start/End: Complemental strand, 48443208 - 48443136
Alignment:
Q  68 aatgtggggaagtgaggtgtttgggattcga--accccaaccccttcataaattatgcaatgttcctaccaac 138  Q
    ||||||| |||||| |||||| || ||||||  ||||| |||||| |||||||||||||||||||||||||||    
T  48443208 aatgtggagaagtggggtgttcggaattcgagaaccccgacccctgcataaattatgcaatgttcctaccaac 48443136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 58 - 141
Target Start/End: Original strand, 19222558 - 19222642
Alignment:
Q  58 tcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactga 141  Q
    |||||||||||| ||||| |||||| |||||  ||| ||||||||||  ||||| ||||||||||||||||| ||| ||||||||    
T  19222558 tcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctgccaactga 19222642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 67 - 146
Target Start/End: Original strand, 29775236 - 29775315
Alignment:
Q  67 taatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    |||||||| ||||||||||||| | | | ||||||||| ||||| ||||| |||| ||||||||||| ||||||| ||||    
T  29775236 taatgtggagaagtgaggtgttcgtggtccgaaccccagcccctgcataatttatacaatgttcctatcaactgagctaa 29775315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 58 - 128
Target Start/End: Complemental strand, 35849579 - 35849508
Alignment:
Q  58 tcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgt 128  Q
    |||||||||||| || || |||||| |||||||||| ||||||||||  ||||| |||||||||||||||||    
T  35849579 tcacacaattaaatggggagaagtggggtgtttggggttcgaaccccggcccctgcataaattatgcaatgt 35849508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 68 - 139
Target Start/End: Original strand, 55383871 - 55383942
Alignment:
Q  68 aatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaact 139  Q
    ||||||| |||||| |||||  ||| ||||||||||  || || ||||||||||||||||||||||||||||    
T  55383871 aatgtggagaagtggggtgtcaggggttcgaacccctgcctctgcataaattatgcaatgttcctaccaact 55383942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 146
Target Start/End: Complemental strand, 15491932 - 15491862
Alignment:
Q  76 gaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    |||||| ||||| |||| ||||||||||||||||| |||| | |||||||| || ||||||||||| ||||    
T  15491932 gaagtggggtgtctggggttcgaaccccaacccctgcatataatatgcaatatttctaccaactgagctaa 15491862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 43280155 - 43280077
Alignment:
Q  68 aatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||||| |||||| |||||  ||||||||||||||  ||||| ||||||||||||||||| ||| |||| ||| ||||    
T  43280155 aatgtggagaagtggggtgtccgggattcgaaccccggcccctgcataaattatgcaatgtccctgccaattgagctaa 43280077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 146
Target Start/End: Complemental strand, 44764842 - 44764731
Alignment:
Q  35 gtctaatagtctag-ggatagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcct 132  Q
    ||||||||| |||| || ||||| |||||||||||| ||||| ||||||  ||||  ||| |||||||||   ||||| ||||||||||||||||| |||    
T  44764842 gtctaatagcctagtggctagagctcacacaattaaatgtggagaagtggagtgtccggggttcgaacccg--cccctgcataaattatgcaatgtccct 44764745  T
Q  133 accaactgaactaa 146  Q
    ||||||||| ||||    
T  44764744 accaactgagctaa 44764731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 47098603 - 47098525
Alignment:
Q  68 aatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||||| |||||||||||| |||| |||||||| |  ||||| |||||||||| |||||| |||| ||||||| ||||    
T  47098603 aatgtggagaagtgaggtgtctggggttcgaacctcggcccctgcataaattatacaatgtccctatcaactgagctaa 47098525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 48515351 - 48515441
Alignment:
Q  52 tagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactga 141  Q
    ||||||||||||| |||| ||||| |||||| |||||  ||| |||||||| | |||||| ||||||||||| ||| | ||||||||||||    
T  48515351 tagagttcacacatttaaatgtggagaagtgtggtgtccggggttcgaacctcgacccctgcataaattatggaatatccctaccaactga 48515441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 146
Target Start/End: Complemental strand, 53203927 - 53203833
Alignment:
Q  53 agagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    |||| |||||||||||| ||||| |||||  ||||| ||||||||||||| || ||| |  |||||||||||||| | |||||||||||| ||||    
T  53203927 agagctcacacaattaaatgtggagaagttgggtgtctgggattcgaacctcagcccttgtataaattatgcaatatccctaccaactgagctaa 53203833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 52 - 146
Target Start/End: Original strand, 3748567 - 3748663
Alignment:
Q  52 tagagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| ||||||||||||  ||||| |||||||| |||  ||| ||||||||||||||||| |||| | ||| |||| | |||||||||||| ||||    
T  3748567 tagagctcacacaattaaattgtggagaagtgagatgtccggggttcgaaccccaacccctgcatataatatacaatatccctaccaactgagctaa 3748663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 9685067 - 9685014
Alignment:
Q  84 gtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaa 137  Q
    ||||| ||||||||||||||| ||||| ||||||||||||||||| ||| ||||    
T  9685067 gtgttcgggattcgaaccccagcccctgcataaattatgcaatgtccctgccaa 9685014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 52 - 146
Target Start/End: Original strand, 22501896 - 22501992
Alignment:
Q  52 tagagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| ||||||||||||  ||||| ||||||  |||| |||| ||||||||||| ||||| |||| | |||||||| | |||||||||||| ||||    
T  22501896 tagagctcacacaattaaattgtggagaagtggagtgtctggggttcgaaccccagcccctgcatataatatgcaatatccctaccaactgagctaa 22501992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 77 - 141
Target Start/End: Original strand, 28226207 - 28226272
Alignment:
Q  77 aagtgaggtgtttgggattcgaaccccaaccccttcata-aattatgcaatgttcctaccaactga 141  Q
    ||||| |||||| ||||||||||||||||||||| |||| ||| ||||| ||||||| ||||||||    
T  28226207 aagtggggtgttcgggattcgaaccccaacccctgcatataataatgcattgttcctgccaactga 28226272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 52 - 146
Target Start/End: Original strand, 34898732 - 34898828
Alignment:
Q  52 tagagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| |||||||||| |  ||||| |||||| ||||| |||| |||||||| || ||||| |||| | |||||||| | |||||||||||||||||    
T  34898732 tagagctcacacaatttaattgtggagaagtggggtgtctggggttcgaacctcagcccctgcatataatatgcaatatccctaccaactgaactaa 34898828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 4237000 - 4237040
Alignment:
Q  106 ccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| ||||||||||||||||| |||||||||||||||||    
T  4237000 cccctgcataaattatgcaatgtccctaccaactgaactaa 4237040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 46817334 - 46817394
Alignment:
Q  68 aatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgt 128  Q
    ||||||| |||||| |||||| ||| ||| |||||||||| || |||||||||||||||||    
T  46817334 aatgtggagaagtggggtgttcggggttcaaaccccaacctctacataaattatgcaatgt 46817394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 13638216 - 13638306
Alignment:
Q  58 tcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||||||||||  ||||| ||||||  |||| |||| ||||||||||| ||||| |||| | |||| ||| | |||||||||||||||||    
T  13638216 tcacacaattaaattgtggagaagtggagtgtctggggttcgaaccccagcccctacatataatatgtaatatccctaccaactgaactaa 13638306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 124
Target Start/End: Original strand, 37756433 - 37756480
Alignment:
Q  77 aagtgaggtgtttgggattcgaaccccaaccccttcataaattatgca 124  Q
    ||||| |||||||||| ||||||||||| ||||| |||||||||||||    
T  37756433 aagtggggtgtttggggttcgaaccccagcccctgcataaattatgca 37756480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 76 - 138
Target Start/End: Original strand, 3614071 - 3614133
Alignment:
Q  76 gaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaac 138  Q
    |||||| |||||  ||| ||||||||||  ||||| ||||||||||||||||| |||||||||    
T  3614071 gaagtggggtgtcaggggttcgaacccctgcccctgcataaattatgcaatgtccctaccaac 3614133  T

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Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 137
Target Start/End: Complemental strand, 26880281 - 26880195
Alignment:
Q  52 tagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaa 137  Q
    ||||| ||||||| |||| ||||| |||||| ||||| ||   |||||||||| |||||| ||||||||||||||||| | ||||||    
T  26880281 tagagctcacacatttaaatgtggagaagtggggtgtctgaagttcgaaccccgacccctgcataaattatgcaatgtccataccaa 26880195  T

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Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 149
Target Start/End: Original strand, 49443389 - 49443487
Alignment:
Q  52 tagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaaact 149  Q
    ||||| ||||||| |||| ||||| |||||| |||||  ||| ||||||| ||  ||||| ||||||||||||||||| ||| |||| ||| |||||||    
T  49443389 tagagctcacacatttaaatgtggagaagtggggtgtccggggttcgaactccggcccctgcataaattatgcaatgtccctgccaattgagctaaact 49443487  T

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Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 112 - 146
Target Start/End: Original strand, 50526659 - 50526693
Alignment:
Q  112 cataaattatgcaatgttcctaccaactgaactaa 146  Q
    |||||||||||||||||||||||||||||| ||||    
T  50526659 cataaattatgcaatgttcctaccaactgagctaa 50526693  T

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Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 146
Target Start/End: Complemental strand, 4542002 - 4541907
Alignment:
Q  52 tagagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||||||||||||||||  ||||| ||||||  |||| |||| | ||||||||| ||||| |||| | ||| |||| | |||||||||||||||||    
T  4542002 tagagttcacacaattaaattgtggagaagtggagtgtctggggt-cgaaccccagcccctgcatataatatacaatatccctaccaactgaactaa 4541907  T

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Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 12792323 - 12792372
Alignment:
Q  84 gtgtttgggattcgaaccccaaccccttcataaattatgcaatgttccta 133  Q
    ||||||||||||| |||| | |||||| |||||||||| |||||||||||    
T  12792323 gtgtttgggattcaaaccacgacccctgcataaattatacaatgttccta 12792372  T

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Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 25938929 - 25938994
Alignment:
Q  84 gtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaaact 149  Q
    |||| |||| ||||||||||| ||||| |||| | |||||||| | |||||||||||| |||||||    
T  25938929 gtgtgtggggttcgaaccccagcccctgcatataatatgcaatatccctaccaactgagctaaact 25938994  T

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Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 128
Target Start/End: Complemental strand, 28951788 - 28951743
Alignment:
Q  83 ggtgtttgggattcgaaccccaaccccttcataaattatgcaatgt 128  Q
    ||||| |||| ||||||||||| ||||| |||||||||||||||||    
T  28951788 ggtgtctggggttcgaaccccagcccctgcataaattatgcaatgt 28951743  T

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Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 146
Target Start/End: Complemental strand, 31587052 - 31586956
Alignment:
Q  52 tagagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| |||||||||| |  ||||| |||||| |||||  ||||||||||| || |||||| |||| | |||||||| | |||||||||||| ||||    
T  31587052 tagagctcacacaatttaattgtggagaagtggggtgtccgggattcgaactccgacccctgcatataatatgcaatatccctaccaactgagctaa 31586956  T

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Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 146
Target Start/End: Original strand, 39966039 - 39966135
Alignment:
Q  52 tagagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| ||||||||||||  ||||| ||||||  |||| || | |||||||| |||||||| |||| | |||||||| | |||||||||||| ||||    
T  39966039 tagagctcacacaattaaattgtggagaagtggagtgtctgaggttcgaacctcaacccctgcatataatatgcaatatccctaccaactgagctaa 39966135  T

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Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 147
Target Start/End: Original strand, 42920632 - 42920709
Alignment:
Q  70 tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaaa 147  Q
    ||||| ||||||  |||| |||| ||||||||||||||||| |||| |  |||| || |||||||||||||| |||||    
T  42920632 tgtggagaagtggagtgtctggggttcgaaccccaacccctgcatataaaatgcgatattcctaccaactgagctaaa 42920709  T

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Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 141
Target Start/End: Original strand, 49375664 - 49375737
Alignment:
Q  68 aatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactga 141  Q
    ||||||| ||||||  ||||  ||| ||||||| ||| ||||| ||||||||||| ||||| ||||||||||||    
T  49375664 aatgtggtgaagtggagtgtccggggttcgaacgccagcccctgcataaattatgtaatgtccctaccaactga 49375737  T

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Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 136
Target Start/End: Complemental strand, 49577473 - 49577388
Alignment:
Q  52 tagagttcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctacca 136  Q
    ||||| |||||||||||| | ||| |||||| ||||| |||| ||  |||||| ||| || ||||||||||||||||| |||||||    
T  49577473 tagagctcacacaattaaatatggagaagtggggtgtctggggtttaaaccccgaccgctgcataaattatgcaatgtccctacca 49577388  T

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Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 141
Target Start/End: Original strand, 52309093 - 52309166
Alignment:
Q  68 aatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactga 141  Q
    ||||||| |||||| ||||| |||| |||||||||| || ||| |||| | |||||||| | ||||||||||||    
T  52309093 aatgtggagaagtggggtgtctggggttcgaaccccgactcctgcatatagtatgcaatatccctaccaactga 52309166  T

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Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 141
Target Start/End: Complemental strand, 32401588 - 32401505
Alignment:
Q  58 tcacacaattaa-tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactga 141  Q
    |||||||||||| ||||| || ||| |||||  ||| ||||||||| | ||||| |||||||||| |||||| ||||||||||||    
T  32401588 tcacacaattaaatgtggagatgtggggtgtccggggttcgaacccga-cccctgcataaattatacaatgtccctaccaactga 32401505  T

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Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 70 - 146
Target Start/End: Original strand, 34102596 - 34102672
Alignment:
Q  70 tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| |||||| |||||  ||| ||||||||||  ||||| |||| | |||||||| | |||||||||||||||||    
T  34102596 tgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactgaactaa 34102672  T

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Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 149
Target Start/End: Complemental strand, 39720040 - 39719941
Alignment:
Q  52 tagagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaaact 149  Q
    ||||| |||||||||| |  ||||| |||||| |||||  ||| ||||||||||  ||||| |||| | |||||||| | |||||||||||| |||||||    
T  39720040 tagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactgagctaaact 39719941  T

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Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 70 - 146
Target Start/End: Original strand, 48739729 - 48739805
Alignment:
Q  70 tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| |||||| ||||| |||| ||||||||||| ||||| |||| |  ||||||| | |||||||||||| ||||    
T  48739729 tgtggagaagtggggtgtctggggttcgaaccccagcccctgcatataaaatgcaatatccctaccaactgagctaa 48739805  T

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Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 146
Target Start/End: Original strand, 53347256 - 53347351
Alignment:
Q  53 agagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    |||| ||||||||||||  ||||| ||||||  |||| |||| |||||||||||  |||| |||| | |||||||| | |||||||||||| ||||    
T  53347256 agagctcacacaattaaattgtggagaagtggagtgtctggggttcgaaccccagtccctgcatataatatgcaatatccctaccaactgagctaa 53347351  T

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Target: scaffold0025 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 52 - 146
Target Start/End: Original strand, 65752 - 65848
Alignment:
Q  52 tagagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| ||||||||||||  ||||  ||||||  ||||  ||||||||||||||||||||| |||| | |||||||| | |||||||||||| ||||    
T  65752 tagagctcacacaattaaattgtgaagaagtggagtgtccgggattcgaaccccaacccctacatataatatgcaatatccctaccaactgagctaa 65848  T

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Target: scaffold0121 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 53 - 146
Target Start/End: Complemental strand, 46630 - 46535
Alignment:
Q  53 agagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    |||||||||||||||||  ||||| | ||||  |||| |||| ||||||||||| ||||| |||| | |||||||| | |||||||||||| ||||    
T  46630 agagttcacacaattaaattgtggagcagtggagtgtctggggttcgaaccccagcccctgcatataatatgcaatatccctaccaactgagctaa 46535  T

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Target: scaffold0519 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 146
Target Start/End: Original strand, 2928 - 3023
Alignment:
Q  52 tagagttcacacaattaat-gtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| ||||||||||||| || | |||||| |||||  ||| ||||||||||  ||||| ||||||||||||||||| |||  ||||||| ||||    
T  2928 tagagctcacacaattaattgtcgagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctttcaactgagctaa 3023  T

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Target: scaffold0445 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 146
Target Start/End: Original strand, 3979 - 4075
Alignment:
Q  52 tagagttcacacaattaa--tgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||| ||||||||||||  ||||| ||||||  |||| |||| |||||||||| || ||| |||| | |||||||| | |||||||||||| ||||    
T  3979 tagagctcacacaattaaattgtggagaagtggagtgtctggggttcgaaccccgactcctgcatataatatgcaatatccctaccaactgagctaa 4075  T

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Target: scaffold0010 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 146
Target Start/End: Original strand, 236338 - 236416
Alignment:
Q  66 ttaatgtggggaagtgaggtgtttgggattcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    |||||||||  ||||| |||||  ||| |||||||||| |||||| |||||  |||||||| | |||||||||||||||||    
T  236338 ttaatgtggataagtggggtgtccggggttcgaaccccgacccctgcataa--tatgcaatatccctaccaactgaactaa 236416  T

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Target: scaffold0460 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 13212 - 13264
Alignment:
Q  94 ttcgaaccccaaccccttcataaattatgcaatgttcctaccaactgaactaa 146  Q
    ||||||||||||||||| |||| | |||||||| | |||||||||||| ||||    
T  13212 ttcgaaccccaacccctgcatataatatgcaatatccctaccaactgagctaa 13264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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