View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12761_low_4 (Length: 357)
Name: NF12761_low_4
Description: NF12761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12761_low_4 |
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Alignment Details
Target: chr6 (Bit Score: 312; Significance: 1e-176; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 1 - 336
Target Start/End: Original strand, 30575950 - 30576285
Alignment:
| Q |
1 |
agtgaaaaatatacctgaaattcatataaatgttgagcaaaaacaactaccaattccaagagcagaaagttcaaccacattgtacatttttgatagagtc |
100 |
Q |
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| T |
30575950 |
agtgaaaaatatacctgaaattcataaaaatgttgagcaaaaacaactaccaattccaagagcagaaagttcaaccgcattgtacatttttgatagagcc |
30576049 |
T |
|
| Q |
101 |
atatgaaaggaaaaactttcccaaccacgacatacagatctggtccgaatctgtgcttgccgagaatgaatgactttgttgtcgtagtggttggtttctt |
200 |
Q |
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| T |
30576050 |
atatgaaaggaaaaactttcccaactgcgacatacagatctggtccgaatctgtgcttgccgagaatgaatgactttgttgtcgtagtggttggtttctt |
30576149 |
T |
|
| Q |
201 |
ccataatatcgacgggagataatacagaggaaggagaacaattatattgaagaaagaaccattgattaatggatcagcattacattaaatttatatacaa |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30576150 |
ccataatatcgacgggagataatacagaggaaggagaacaattatattgaagaaagaaccattgattaatggatcagcattacattaaatttatatacaa |
30576249 |
T |
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| Q |
301 |
gagggatgaggaggactattacattgaagctatagt |
336 |
Q |
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|| ||||||||||||||||||||||||||||||||| |
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| T |
30576250 |
gatggatgaggaggactattacattgaagctatagt |
30576285 |
T |
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