View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12762_low_3 (Length: 525)

Name: NF12762_low_3
Description: NF12762
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12762_low_3
NF12762_low_3
[»] chr4 (53 HSPs)
chr4 (219-443)||(6911337-6911558)
chr4 (4-145)||(6911632-6911773)
chr4 (4-136)||(30201999-30202131)
chr4 (4-136)||(24825610-24825742)
chr4 (9-136)||(26742496-26742623)
chr4 (4-133)||(29268805-29268934)
chr4 (4-137)||(43244409-43244542)
chr4 (4-137)||(22757054-22757187)
chr4 (4-140)||(7083844-7083980)
chr4 (4-136)||(24568741-24568873)
chr4 (4-136)||(44757070-44757202)
chr4 (3-137)||(39837554-39837689)
chr4 (4-134)||(5814310-5814440)
chr4 (4-130)||(7060291-7060417)
chr4 (9-130)||(394307-394428)
chr4 (4-136)||(8712491-8712623)
chr4 (10-137)||(20399937-20400064)
chr4 (4-140)||(24100092-24100234)
chr4 (27-136)||(7084167-7084276)
chr4 (12-136)||(25658128-25658252)
chr4 (4-136)||(26674333-26674465)
chr4 (4-136)||(27394791-27394923)
chr4 (9-137)||(31521942-31522070)
chr4 (10-133)||(478046-478168)
chr4 (9-117)||(51152105-51152213)
chr4 (4-136)||(11210341-11210473)
chr4 (4-112)||(13965545-13965653)
chr4 (4-133)||(24611827-24611956)
chr4 (1-117)||(19745369-19745485)
chr4 (1-117)||(19794321-19794437)
chr4 (12-141)||(29922790-29922922)
chr4 (4-132)||(626577-626703)
chr4 (19-133)||(7861248-7861362)
chr4 (4-141)||(39523374-39523502)
chr4 (4-107)||(38944176-38944278)
chr4 (4-109)||(45351098-45351205)
chr4 (4-109)||(45360577-45360684)
chr4 (14-115)||(22049442-22049543)
chr4 (4-91)||(6881962-6882049)
chr4 (10-100)||(50801214-50801304)
chr4 (10-83)||(43493321-43493394)
chr4 (4-114)||(12717145-12717255)
chr4 (4-110)||(20887784-20887889)
chr4 (3-119)||(3159021-3159137)
chr4 (4-100)||(36124377-36124471)
chr4 (4-53)||(8517484-8517533)
chr4 (44-140)||(28837034-28837128)
chr4 (19-136)||(42197514-42197630)
chr4 (19-136)||(13586284-13586395)
chr4 (4-88)||(2447809-2447893)
chr4 (10-46)||(32616859-32616895)
chr4 (73-117)||(55600585-55600629)
chr4 (64-119)||(56061977-56062032)
[»] chr6 (23 HSPs)
chr6 (4-136)||(12481398-12481530)
chr6 (4-136)||(23654211-23654343)
chr6 (4-137)||(15590107-15590240)
chr6 (4-136)||(6419886-6420018)
chr6 (4-137)||(8693685-8693821)
chr6 (4-133)||(21507836-21507965)
chr6 (4-136)||(2304838-2304970)
chr6 (1-130)||(14783197-14783325)
chr6 (4-136)||(19402836-19402968)
chr6 (4-136)||(4921909-4922042)
chr6 (4-149)||(6296277-6296425)
chr6 (4-149)||(6303087-6303235)
chr6 (9-136)||(35219937-35220063)
chr6 (4-115)||(31937448-31937557)
chr6 (9-79)||(23638151-23638221)
chr6 (57-138)||(4084977-4085058)
chr6 (44-136)||(29927447-29927539)
chr6 (4-90)||(4393777-4393863)
chr6 (14-53)||(15057725-15057764)
chr6 (9-71)||(31937565-31937626)
chr6 (4-45)||(29927122-29927163)
chr6 (4-53)||(31705209-31705258)
chr6 (95-123)||(13234209-13234237)
[»] chr3 (42 HSPs)
chr3 (4-136)||(48652476-48652608)
chr3 (4-149)||(32080790-32080938)
chr3 (4-146)||(55090619-55090761)
chr3 (4-124)||(11819056-11819176)
chr3 (4-136)||(36691835-36691967)
chr3 (4-136)||(48400860-48400992)
chr3 (4-137)||(31270286-31270419)
chr3 (4-137)||(31462782-31462915)
chr3 (4-133)||(53155466-53155595)
chr3 (4-136)||(3456904-3457036)
chr3 (4-136)||(13702008-13702140)
chr3 (4-128)||(38527232-38527356)
chr3 (4-141)||(34960894-34961031)
chr3 (4-132)||(14585427-14585555)
chr3 (9-136)||(1074935-1075061)
chr3 (19-141)||(27189445-27189566)
chr3 (4-133)||(49628123-49628253)
chr3 (4-137)||(35174664-35174797)
chr3 (4-137)||(40013308-40013443)
chr3 (4-117)||(54239054-54239167)
chr3 (4-136)||(4206547-4206679)
chr3 (10-130)||(30156324-30156443)
chr3 (4-141)||(39610160-39610305)
chr3 (4-115)||(41868330-41868442)
chr3 (4-130)||(36624730-36624856)
chr3 (4-101)||(22484961-22485058)
chr3 (4-117)||(40883904-40884018)
chr3 (10-78)||(33637422-33637490)
chr3 (4-131)||(19645187-19645314)
chr3 (18-136)||(24483728-24483846)
chr3 (36-147)||(53402580-53402691)
chr3 (4-55)||(34103753-34103804)
chr3 (4-119)||(106071-106187)
chr3 (19-124)||(19861331-19861433)
chr3 (9-71)||(4817871-4817933)
chr3 (4-53)||(3312487-3312536)
chr3 (96-136)||(33637383-33637423)
chr3 (64-136)||(48854867-48854939)
chr3 (4-67)||(2147756-2147820)
chr3 (4-110)||(4219169-4219273)
chr3 (86-138)||(45664198-45664251)
chr3 (15-52)||(54706715-54706752)
[»] chr5 (34 HSPs)
chr5 (4-149)||(17331273-17331421)
chr5 (4-140)||(29097746-29097882)
chr5 (4-141)||(43493828-43493965)
chr5 (4-136)||(33164496-33164628)
chr5 (4-137)||(17699513-17699646)
chr5 (4-138)||(28040588-28040722)
chr5 (4-136)||(6635210-6635343)
chr5 (4-133)||(27241028-27241157)
chr5 (4-136)||(6281005-6281137)
chr5 (4-133)||(17096267-17096399)
chr5 (4-136)||(32347742-32347874)
chr5 (4-136)||(26295086-26295218)
chr5 (4-112)||(34431045-34431153)
chr5 (9-136)||(3740319-3740445)
chr5 (4-114)||(42609127-42609237)
chr5 (4-136)||(20483147-20483279)
chr5 (27-138)||(981076-981187)
chr5 (4-133)||(17687177-17687298)
chr5 (4-114)||(178134-178244)
chr5 (4-133)||(42396540-42396670)
chr5 (4-133)||(12439662-12439790)
chr5 (58-133)||(7771888-7771963)
chr5 (4-141)||(39531432-39531566)
chr5 (25-136)||(6681923-6682034)
chr5 (4-119)||(23882144-23882259)
chr5 (4-87)||(39179856-39179939)
chr5 (4-84)||(3079333-3079413)
chr5 (4-67)||(12891706-12891769)
chr5 (4-71)||(18653808-18653875)
chr5 (4-115)||(25961907-25962020)
chr5 (4-51)||(11734847-11734892)
chr5 (60-119)||(6887245-6887304)
chr5 (4-45)||(2555378-2555419)
chr5 (60-119)||(31645817-31645876)
[»] chr1 (37 HSPs)
chr1 (4-136)||(27534660-27534792)
chr1 (4-136)||(424319-424451)
chr1 (4-149)||(13488564-13488711)
chr1 (4-140)||(18343568-18343707)
chr1 (4-136)||(3232749-3232881)
chr1 (4-136)||(28678158-28678290)
chr1 (16-136)||(7995600-7995721)
chr1 (4-133)||(32784072-32784201)
chr1 (4-136)||(33487058-33487190)
chr1 (4-136)||(42490854-42490986)
chr1 (4-137)||(20411533-20411666)
chr1 (4-136)||(4882387-4882519)
chr1 (4-132)||(29205250-29205378)
chr1 (4-133)||(12871585-12871714)
chr1 (16-130)||(14265251-14265365)
chr1 (14-136)||(17347560-17347681)
chr1 (4-136)||(45193654-45193786)
chr1 (4-136)||(45750439-45750571)
chr1 (4-102)||(37822373-37822471)
chr1 (9-133)||(42276321-42276444)
chr1 (4-87)||(44517157-44517240)
chr1 (4-136)||(4871054-4871186)
chr1 (4-89)||(10627008-10627093)
chr1 (57-141)||(33939083-33939167)
chr1 (42-133)||(15791554-15791645)
chr1 (4-71)||(51418040-51418106)
chr1 (4-70)||(29726624-29726690)
chr1 (3-115)||(32878690-32878799)
chr1 (4-54)||(15391280-15391330)
chr1 (4-115)||(9298442-9298552)
chr1 (95-136)||(5832204-5832245)
chr1 (65-114)||(13869627-13869675)
chr1 (4-45)||(15791303-15791344)
chr1 (35-114)||(33125865-33125943)
chr1 (81-136)||(47551106-47551161)
chr1 (4-68)||(28399349-28399414)
chr1 (95-136)||(29726692-29726732)
[»] chr2 (45 HSPs)
chr2 (1-149)||(25067803-25067947)
chr2 (4-140)||(43474156-43474292)
chr2 (4-137)||(12704647-12704780)
chr2 (4-141)||(31908844-31908981)
chr2 (4-136)||(27095666-27095798)
chr2 (11-136)||(11937893-11938019)
chr2 (4-137)||(5754248-5754381)
chr2 (4-136)||(22597096-22597228)
chr2 (4-136)||(38535333-38535465)
chr2 (4-138)||(44942244-44942378)
chr2 (4-137)||(7072976-7073109)
chr2 (4-141)||(9978697-9978834)
chr2 (4-136)||(33012038-33012170)
chr2 (10-121)||(18089426-18089537)
chr2 (4-119)||(20561160-20561275)
chr2 (4-136)||(9690001-9690133)
chr2 (4-136)||(15919835-15919966)
chr2 (4-136)||(32015181-32015317)
chr2 (15-136)||(34963105-34963225)
chr2 (4-135)||(36867970-36868101)
chr2 (4-141)||(4604335-4604472)
chr2 (10-136)||(13879040-13879174)
chr2 (10-136)||(14019165-14019299)
chr2 (19-124)||(17268167-17268272)
chr2 (4-136)||(28261916-28262052)
chr2 (15-124)||(38384481-38384590)
chr2 (4-137)||(34470925-34471059)
chr2 (4-118)||(13740688-13740801)
chr2 (10-112)||(35333490-35333592)
chr2 (3-100)||(4426685-4426782)
chr2 (4-136)||(28231125-28231257)
chr2 (4-133)||(34416789-34416918)
chr2 (4-136)||(4739292-4739422)
chr2 (4-106)||(10287034-10287135)
chr2 (4-78)||(32314461-32314535)
chr2 (4-109)||(4732059-4732163)
chr2 (79-136)||(12891192-12891249)
chr2 (4-115)||(17767579-17767690)
chr2 (64-127)||(41797585-41797648)
chr2 (4-44)||(12891147-12891187)
chr2 (4-113)||(11798544-11798653)
chr2 (4-77)||(20607340-20607414)
chr2 (4-71)||(6431415-6431483)
chr2 (79-115)||(28231200-28231236)
chr2 (93-133)||(34416993-34417033)
[»] scaffold0312 (1 HSPs)
scaffold0312 (4-136)||(6098-6230)
[»] chr8 (34 HSPs)
chr8 (4-136)||(41361693-41361825)
chr8 (4-137)||(9501549-9501683)
chr8 (4-136)||(14600734-14600866)
chr8 (10-141)||(2025251-2025382)
chr8 (4-127)||(30026916-30027039)
chr8 (4-136)||(10147907-10148040)
chr8 (4-137)||(24791204-24791337)
chr8 (4-133)||(37612617-37612746)
chr8 (4-136)||(39067725-39067857)
chr8 (4-136)||(31308103-31308241)
chr8 (4-133)||(1810256-1810384)
chr8 (1-130)||(12329593-12329722)
chr8 (4-136)||(2234506-2234638)
chr8 (4-136)||(31407784-31407916)
chr8 (4-136)||(11161843-11161975)
chr8 (4-136)||(31202419-31202551)
chr8 (4-136)||(24699791-24699925)
chr8 (9-137)||(1039934-1040061)
chr8 (4-136)||(10338858-10338989)
chr8 (9-136)||(23971135-23971262)
chr8 (4-119)||(13570762-13570877)
chr8 (60-136)||(7583856-7583932)
chr8 (9-112)||(3204797-3204899)
chr8 (26-129)||(10334142-10334245)
chr8 (4-82)||(37128522-37128600)
chr8 (4-55)||(7579891-7579942)
chr8 (4-90)||(15288834-15288920)
chr8 (4-90)||(15469203-15469289)
chr8 (14-71)||(4757191-4757248)
chr8 (4-50)||(22787539-22787585)
chr8 (94-136)||(30027040-30027082)
chr8 (10-86)||(32778992-32779069)
chr8 (26-113)||(30039389-30039476)
chr8 (57-119)||(13576265-13576326)
[»] chr7 (46 HSPs)
chr7 (4-133)||(28664940-28665069)
chr7 (9-136)||(45457589-45457716)
chr7 (4-137)||(5684325-5684458)
chr7 (4-137)||(5709375-5709508)
chr7 (4-136)||(42603797-42603929)
chr7 (4-136)||(46026057-46026189)
chr7 (10-117)||(9785297-9785404)
chr7 (9-136)||(39533008-39533134)
chr7 (3-137)||(48304422-48304556)
chr7 (4-136)||(11832979-11833112)
chr7 (4-137)||(17473751-17473884)
chr7 (4-137)||(17579330-17579463)
chr7 (4-136)||(10574342-10574474)
chr7 (4-136)||(21603424-21603555)
chr7 (4-136)||(36579340-36579472)
chr7 (9-136)||(41287918-41288046)
chr7 (4-136)||(42644637-42644769)
chr7 (10-136)||(3266343-3266475)
chr7 (14-137)||(22747546-22747668)
chr7 (19-136)||(6667356-6667474)
chr7 (4-137)||(4621395-4621528)
chr7 (15-136)||(17509243-17509363)
chr7 (15-136)||(17543851-17543971)
chr7 (4-133)||(24320251-24320380)
chr7 (4-119)||(21990639-21990755)
chr7 (4-137)||(27535416-27535551)
chr7 (4-130)||(45482031-45482157)
chr7 (4-136)||(1281165-1281297)
chr7 (4-136)||(2622555-2622685)
chr7 (11-136)||(32740714-32740839)
chr7 (4-78)||(10094460-10094534)
chr7 (4-76)||(15674640-15674712)
chr7 (4-74)||(32643035-32643105)
chr7 (4-133)||(14657849-14657972)
chr7 (9-84)||(43847083-43847158)
chr7 (64-136)||(24988443-24988514)
chr7 (63-115)||(36719628-36719680)
chr7 (60-130)||(40761556-40761626)
chr7 (12-115)||(21954854-21954957)
chr7 (9-134)||(37376064-37376194)
chr7 (19-136)||(9720017-9720128)
chr7 (93-137)||(15674742-15674786)
chr7 (9-49)||(40761659-40761699)
chr7 (35-115)||(39707272-39707351)
chr7 (9-119)||(17221643-17221752)
chr7 (4-39)||(26161038-26161073)
[»] scaffold1379 (2 HSPs)
scaffold1379 (4-136)||(1114-1246)
scaffold1379 (10-71)||(1-62)
[»] scaffold0536 (1 HSPs)
scaffold0536 (4-133)||(2864-2995)
[»] scaffold0155 (1 HSPs)
scaffold0155 (4-136)||(35043-35177)
[»] scaffold0056 (1 HSPs)
scaffold0056 (4-119)||(74142-74257)
[»] scaffold0001 (1 HSPs)
scaffold0001 (4-132)||(404286-404414)
[»] scaffold0432 (1 HSPs)
scaffold0432 (9-117)||(2450-2557)
[»] scaffold1350 (1 HSPs)
scaffold1350 (4-138)||(1534-1667)
[»] scaffold0321 (1 HSPs)
scaffold0321 (4-107)||(7152-7255)
[»] scaffold0294 (1 HSPs)
scaffold0294 (4-136)||(4095-4226)
[»] scaffold0121 (1 HSPs)
scaffold0121 (4-136)||(13273-13408)


Alignment Details
Target: chr4 (Bit Score: 167; Significance: 3e-89; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 219 - 443
Target Start/End: Complemental strand, 6911558 - 6911337
Alignment:
Q  219 gattttcaagcgtcagacgaactcggttggcttaaaatgtccatatgtcacgacaaagatgtgagatttacttgtggtcaattacctttttaaaaaggta 318  Q
    ||||||| ||||||||||| ||||  |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||| ||||||||||||    
T  6911558 gattttcgagcgtcagacggactcaattggcttaaaatgtccatatgtcatgacaaagatgtgagctttacttgtggtcaattccctctttaaaaaggta 6911459  T
Q  319 taataataatagtcattctgacattaaatgtcaaacttgcattatttccatctaatatttataacacacaactacatcttcgataagtgcatgcagcctt 418  Q
    ||||||||   |||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  6911458 taataata---gtcattctgacattaaatgtcaaacttgcactatttccatctaatatttcttacacacaactacatcttcgataagtgcatgcagcctt 6911362  T
Q  419 cttatcatctctaaacttttttcaa 443  Q
    |||||||||||||||||||||||||    
T  6911361 cttatcatctctaaacttttttcaa 6911337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 4 - 145
Target Start/End: Complemental strand, 6911773 - 6911632
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  6911773 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggagaggtgatttttggatcaaaattgac 6911674  T
Q  104 cctaaatcacccctctaacaagaagaagaagaaagggggcga 145  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  6911673 cctaaatcacccctctaacaagaagaagaagaaagggagcga 6911632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 30202131 - 30201999
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| | | | |||||||||||||||||||||||||    
T  30202131 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaagataaaaggaaaaacaactagaaggggtgatttttggatcaaaattgac 30202032  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    | |||||||||||||| ||||||||||||||||    
T  30202031 cttaaatcacccctctgacaagaagaagaagaa 30201999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 24825742 - 24825610
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||| ||||| | ||||||||| | ||||||||||     
T  24825742 aaaaacaaacgaaagaaaatagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggaggagtgatttttaggtcaaaattgat 24825643  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    |||||||||||||||||||||||||||||||||    
T  24825642 cctaaatcacccctctaacaagaagaagaagaa 24825610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 26742496 - 26742623
Alignment:
Q  9 caaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaa 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||| ||||||||||||| |||||||||| |||||    
T  26742496 caaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaagatagaaagaaaaacaattcggatgggtgatttttgggtcaaaattgatcctaa 26742595  T
Q  109 atcacccctctaacaagaagaagaagaa 136  Q
    ||||||| ||||| |||||||| |||||    
T  26742596 atcacccatctaaaaagaagaaaaagaa 26742623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 4 - 133
Target Start/End: Original strand, 29268805 - 29268934
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||| ||||| |||||||||| || |||||||||||    
T  29268805 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaactcggaggggtgattttagggtcaaaattgac 29268904  T
Q  104 cctaaatcacccctctaacaagaagaagaa 133  Q
    | |||||||||||||| |||||||||||||    
T  29268905 cttaaatcacccctctgacaagaagaagaa 29268934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 43244409 - 43244542
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||||  ||||||||||||||||||||||||||||| | ||||||||||||||| || || ||||||||||||| |||||||||||    
T  43244409 aaaaacaaacgaaagaaaatcgaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcagaggggtgatttttgggtcaaaattgac 43244508  T
Q  104 cctaaatcacccctctaacaagaagaagaagaaa 137  Q
    |||||||||||||||||| || ||||||||||||    
T  43244509 cctaaatcacccctctaaaaaaaagaagaagaaa 43244542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 22757187 - 22757054
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||| |||||| |||||||||||||||||||||||||||| | ||||||||||||||| |||||  |||||||||||  |||||||||||    
T  22757187 aaaaacaaacgaaaaaaaacataaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggagtggtgatttttgagtcaaaattgac 22757088  T
Q  104 cctaaatcacccctctaacaagaagaagaagaaa 137  Q
    |||||||||||||||| | |||||||||||||||    
T  22757087 cctaaatcacccctctgaaaagaagaagaagaaa 22757054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 4 - 140
Target Start/End: Original strand, 7083844 - 7083980
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||| ||  | |||||||||||||||||||||||||    
T  7083844 aaaaacaaacgaaagaaaatagaaaatatgtgaaatcacttattcaattatgatagaaggaaaaacaattcataggggtgatttttggatcaaaattgac 7083943  T
Q  104 cctaaatcacccctctaacaagaagaagaagaaaggg 140  Q
    ||||||| | || ||| | ||||||||||||||||||    
T  7083944 cctaaattatccatctgaaaagaagaagaagaaaggg 7083980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 24568741 - 24568873
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||| |||||||| ||||||| |||||||||||||||||| | |||||||||||| || ||||||||||||||||||| |||||||| ||    
T  24568741 aaaaacaaacgaaataaaacagataatatgtaaaatcacttattcaattaggatagaaggaaaaataattcggaagggtgatttttgggtcaaaattcac 24568840  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    |||||||||||||||| | ||||||||||||||    
T  24568841 cctaaatcacccctctgaaaagaagaagaagaa 24568873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 44757070 - 44757202
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||| ||| | ||||||||||||| |||||||||||    
T  44757070 aaaaacaaacgaaagaaaacataaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcgaatgggtgatttttgggtcaaaattgac 44757169  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    | |||||||||||||| | ||||||||| ||||    
T  44757170 cttaaatcacccctctgataagaagaaggagaa 44757202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 3 - 137
Target Start/End: Complemental strand, 39837689 - 39837554
Alignment:
Q  3 aaaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaagg-aaaaacaaatcggaagggtgatttttggatcaaaattg 101  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| | || |||| ||||| |||||| | ||||||||||||| |||||||||    
T  39837689 aaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggataaaagggaaaaaaaaatcgaaggggtgatttttgggtcaaaattg 39837590  T
Q  102 accctaaatcacccctctaacaagaagaagaagaaa 137  Q
    || ||||||||||||||| | |||||||||||||||    
T  39837589 acgctaaatcacccctctgaaaagaagaagaagaaa 39837554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 4 - 134
Target Start/End: Complemental strand, 5814440 - 5814310
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||||  |||||||||||||| ||||||||||||||| ||||||| ||||||| | ||| || ||||||||||||||||||||||    
T  5814440 aaaaacaaacgaaagaaaactaaaaatatgtgaaataacttattcaattaagatagaagggaaaacaacttggagggatgatttttggatcaaaattgac 5814341  T
Q  104 cctaaatcacccctctaacaagaagaagaag 134  Q
    ||||||||||| | |||||||||||||||||    
T  5814340 cctaaatcacctccctaacaagaagaagaag 5814310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 4 - 130
Target Start/End: Complemental strand, 7060417 - 7060291
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||| ||||| ||||||||||||| | |||||||||    
T  7060417 aaaaacaaacgaaagaaaacataaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggaggggtgatttttgggttaaaattgac 7060318  T
Q  104 cctaaatcacccctctaacaagaagaa 130  Q
    ||||||| |||||||| | ||||||||    
T  7060317 cctaaattacccctctgaaaagaagaa 7060291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 9 - 130
Target Start/End: Original strand, 394307 - 394428
Alignment:
Q  9 caaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaa 108  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||||| | ||||||||||||||| ||||| ||||||||||||| ||||||||||||||||    
T  394307 caaacgaaagaaagcagaaaagatgtgaaatcacttattgaattaggatagaaggaaaaacaattcggaggggtgatttttgggtcaaaattgaccctaa 394406  T
Q  109 atcacccctctaacaagaagaa 130  Q
    |||||||||| || ||||||||    
T  394407 atcacccctccaaaaagaagaa 394428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 8712623 - 8712491
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||||| |||||||||||||||||||| |||| || | ||||||||||||||| |  || ||||||||||||| |||||||||||    
T  8712623 aaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttactcaactaggatagaaggaaaaacaattatgaggggtgatttttgggtcaaaattgac 8712524  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    |||||||||||||| ||| ||||||||||||||    
T  8712523 cctaaatcacccctgtaaaaagaagaagaagaa 8712491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 10 - 137
Target Start/End: Original strand, 20399937 - 20400064
Alignment:
Q  10 aaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaa 109  Q
    ||||||||||||||||||||||| |||||||||||||||||||| | |||||| |||| ||| ||||  ||||||||||||| |||||||||||||||||    
T  20399937 aaacgaaagaaaacagaaaatatatgaaatcacttattcaattaggatagaagaaaaagcaattcgggtgggtgatttttgggtcaaaattgaccctaaa 20400036  T
Q  110 tcacccctctaacaagaagaagaagaaa 137  Q
    || ||| ||||| |||||||||||||||    
T  20400037 tcgcccttctaaaaagaagaagaagaaa 20400064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 4 - 140
Target Start/End: Complemental strand, 24100234 - 24100092
Alignment:
Q  4 aaaagcaaacgaaagaaaacaga--aaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattg 101  Q
    |||| ||||||||||||||||||  ||||||||||||||||||||||||||| | ||||||||||||||| ||||| |||| |||||||| |||||||||    
T  24100234 aaaaacaaacgaaagaaaacagagaaaatatgtgaaatcacttattcaattacgatagaaggaaaaacaattcggatgggtaatttttggttcaaaattg 24100135  T
Q  102 accctaaatcacccctct----aacaagaagaagaagaaaggg 140  Q
    | ||||||||||||||||    || ||||||||||||||||||    
T  24100134 atcctaaatcacccctctaaaaaaaaagaagaagaagaaaggg 24100092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 27 - 136
Target Start/End: Complemental strand, 7084276 - 7084167
Alignment:
Q  27 aaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatcacccctctaacaaga 126  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||| |||||||||| |||||||||||||||| |||| |    
T  7084276 aaatatgtgcaatcacttattcaattaaggtagaaggaaaaacaaatcggaagcataatttttgggtcaaaattgaacctaaatcacccctctgacaaca 7084177  T
Q  127 agaagaagaa 136  Q
    ||||||||||    
T  7084176 agaagaagaa 7084167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 12 - 136
Target Start/End: Complemental strand, 25658252 - 25658128
Alignment:
Q  12 acgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatc 111  Q
    |||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||| | |||  |||||||||||  |||||||| ||||||||||    
T  25658252 acgaaagaaaacagaaaatatgtgaaatcacttattaaattaggaaagaaggaaaaacaatttggagaggtgatttttgagtcaaaattaaccctaaatc 25658153  T
Q  112 acccctctaacaagaagaagaagaa 136  Q
    |||||||||| ||||||||||||||    
T  25658152 acccctctaaaaagaagaagaagaa 25658128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 26674465 - 26674333
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||| ||| | ||| ||||||||||| | ||||||||||     
T  26674465 aaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaattatgatagaaggaaaagcaatttggaggggtgatttttaggtcaaaattgat 26674366  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    |||||||||||| ||| | ||||||||||||||    
T  26674365 cctaaatcacccatctgaaaagaagaagaagaa 26674333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 27394923 - 27394791
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||||| ||||||| | |||| ||||||||||||| | |||||||||||| ||  |||||||||||||||||| |||||||||||    
T  27394923 aaaaacaaacgaaagaaaacataaaatattttaaattacttattcaattaggatagaaggaaaaataatccggaagggtgatttttgggtcaaaattgac 27394824  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    |||||||||||||| | | ||||||||||||||    
T  27394823 cctaaatcacccctgtgaaaagaagaagaagaa 27394791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 31522070 - 31521942
Alignment:
Q  9 caaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaa 108  Q
    ||||| |||||||||| | |||||||||||||||||||||||||| | ||||||||||||||| ||||| ||||||||||| | ||||||||||||||||    
T  31522070 caaactaaagaaaacaaagaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggaggggtgatttttaggtcaaaattgaccctaa 31521971  T
Q  109 atcacccctctaacaagaagaagaagaaa 137  Q
    ||||||||| | | |||||||| ||||||    
T  31521970 atcacccctttgaaaagaagaacaagaaa 31521942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 10 - 133
Target Start/End: Original strand, 478046 - 478168
Alignment:
Q  10 aaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaa 109  Q
    ||||||||| ||||||||||||||| |||||||||||||||||| | || |||||||||||| |||| | |||||||||||| |||||||||||| ||||    
T  478046 aaacgaaaggaaacagaaaatatgtaaaatcacttattcaattaggatataaggaaaaacaattcgg-atggtgatttttgggtcaaaattgaccataaa 478144  T
Q  110 tcacccctctaacaagaagaagaa 133  Q
    |||||||||||| |||||||||||    
T  478145 tcacccctctaaaaagaagaagaa 478168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 9 - 117
Target Start/End: Complemental strand, 51152213 - 51152105
Alignment:
Q  9 caaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaa 108  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||| | ||||||||||||||| ||||| ||||||||||||| |||| ||||||| |||    
T  51152213 caaacgaaagaaagcagaaaatatgtgaaatcacttattaaattaggatagaaggaaaaacaattcggaggggtgatttttgggtcaatattgaccntaa 51152114  T
Q  109 atcacccct 117  Q
    |||||||||    
T  51152113 atcacccct 51152105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 11210341 - 11210473
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||| || ||||||||||||||||||||||||||| | | | |||||||| || ||||| ||||||||||| |  ||||||||||    
T  11210341 aaaaacaaacgaaagaaaagagtaaatatgtgaaatcacttattcaattatgatgggaggaaaaataattcggaggggtgatttttagggcaaaattgac 11210440  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    |||||||||||||||||  ||||||||||||||    
T  11210441 cctaaatcacccctctacaaagaagaagaagaa 11210473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 13965653 - 13965545
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||||| | |||||||||||||||||||||||||| | ||||||||||||||| ||| | ||||||||||||| |||||||||||    
T  13965653 aaaaacaaacgaaagaaaacatagaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcgaaggggtgatttttgggtcaaaattgac 13965554  T
Q  104 cctaaatca 112  Q
    |||||||||    
T  13965553 cctaaatca 13965545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 4 - 133
Target Start/End: Original strand, 24611827 - 24611956
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||| | ||||||| ||||  | |  || ||||||||||||| || ||||||||    
T  24611827 aaaagcaaacgaaaaaaaatagaaaatatgtgaaatcacttattcaattaggatagaagggaaaatgacttagaggggtgatttttgggtctaaattgac 24611926  T
Q  104 cctaaatcacccctctaacaagaagaagaa 133  Q
    | |||||||||||||||| |||||||||||    
T  24611927 cataaatcacccctctaagaagaagaagaa 24611956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 19745485 - 19745369
Alignment:
Q  1 acaaaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaatt 100  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||| | || ||| |||||||| ||||| |  |||||||||| ||||||||    
T  19745485 acaaaaaacaaacgaaagaaaacagaaaatatgtgaaatcaattattcaattaggataaaagcaaaaacaattcggatgaatgatttttgggtcaaaatt 19745386  T
Q  101 gaccctaaatcacccct 117  Q
    || ||||||||||||||    
T  19745385 gatcctaaatcacccct 19745369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 19794321 - 19794437
Alignment:
Q  1 acaaaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaatt 100  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||| | || ||| |||||||| ||||| |  |||||||||| ||||||||    
T  19794321 acaaaaaacaaacgaaagaaaacagaaaatatgtgaaatcaattattcaattaggataaaagcaaaaacaattcggatgaatgatttttgggtcaaaatt 19794420  T
Q  101 gaccctaaatcacccct 117  Q
    || ||||||||||||||    
T  19794421 gatcctaaatcacccct 19794437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 12 - 141
Target Start/End: Complemental strand, 29922922 - 29922790
Alignment:
Q  12 acgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaa---caaatcggaagggtgatttttggatcaaaattgaccctaa 108  Q
    ||||||| ||| |||||||||||||||||||||||||||||| | ||||| ||||||   ||| | ||| |||||||| || | ||||||||||||||||    
T  29922922 acgaaaggaaatagaaaatatgtgaaatcacttattcaattaggatagaaagaaaaaaaacaacttggaggggtgattattaggtcaaaattgaccctaa 29922823  T
Q  109 atcacccctctaacaagaagaagaagaaagggg 141  Q
    |||||| |||| |||||||||||||||||||||    
T  29922822 atcacctctctgacaagaagaagaagaaagggg 29922790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 132
Target Start/End: Original strand, 626577 - 626703
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||| | |||||| ||||| || || || ||||||||||||| ||||||||  |    
T  626577 aaaaacaaacgaaagaaaacagaaaatatgtgaa-tcacttattcaattatgatagaag-aaaaataattcagatgggtgatttttgggtcaaaattagc 626674  T
Q  104 cctaaatcacccctctaacaagaagaaga 132  Q
    |||||||||||||||| | ||||||||||    
T  626675 cctaaatcacccctctgaaaagaagaaga 626703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 7861248 - 7861362
Alignment:
Q  19 aaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatcacccctc 118  Q
    ||||||||||||||||||||||||||||| ||||| | |||||||||||| || || ||  |||||||||||| ||||||||||  ||||||||||| ||    
T  7861248 aaaacagaaaatatgtgaaatcacttatttaattaggatagaaggaaaaataattcagagtggtgatttttgggtcaaaattgattctaaatcacccatc 7861347  T
Q  119 taacaagaagaagaa 133  Q
    | |||||||||||||    
T  7861348 tgacaagaagaagaa 7861362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 4 - 141
Target Start/End: Complemental strand, 39523502 - 39523374
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||| | || ||||||||||||          |||||||||| |||||||||||    
T  39523502 aaaaacaaacgaaagaaaacagaaaacatgtgaaatcacttattcaattaggataaaaggaaaaacaa---------ttgatttttgggtcaaaattgac 39523412  T
Q  104 cctaaatcacccctctaacaagaagaagaagaaagggg 141  Q
     |||||||||||||||||  ||||||| ||||||||||    
T  39523411 tctaaatcacccctctaaatagaagaaaaagaaagggg 39523374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 38944176 - 38944278
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||| || | ||||||||||||||| | ||| |||||||||||||  ||||||||||    
T  38944176 aaaaacaaacgaaagaaaaca-aaaatatgtgaaatcacttattcaactacgatagaaggaaaaacaatttggaggggtgatttttgggccaaaattgac 38944274  T
Q  104 ccta 107  Q
    ||||    
T  38944275 ccta 38944278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 45351098 - 45351205
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattc-aattaaggtagaagg-aaaaacaaatcggaagggtgatttttggatcaaaattg 101  Q
    |||| ||||||||| |||||||||||||||||||||||||||||| |||||   || |||| |||||||| ||||| |||||||||||||||||||||||    
T  45351098 aaaaacaaacgaaacaaaacagaaaatatgtgaaatcacttattcaaattagaataaaaggaaaaaacaattcggaggggtgatttttggatcaaaattg 45351197  T
Q  102 accctaaa 109  Q
    ||||||||    
T  45351198 accctaaa 45351205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 45360577 - 45360684
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattc-aattaaggtagaagg-aaaaacaaatcggaagggtgatttttggatcaaaattg 101  Q
    |||| ||||||||| |||||||||||||||||||||||||||||| |||||   || |||| |||||||| ||||| |||||||||||||||||||||||    
T  45360577 aaaaacaaacgaaacaaaacagaaaatatgtgaaatcacttattcaaattagaataaaaggaaaaaacaattcggaggggtgatttttggatcaaaattg 45360676  T
Q  102 accctaaa 109  Q
    ||||||||    
T  45360677 accctaaa 45360684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 14 - 115
Target Start/End: Original strand, 22049442 - 22049543
Alignment:
Q  14 gaaagaaaacagaaaatatgtg-aaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatca 112  Q
    |||||||||| ||||||||||| |||||||||||||||||| | ||||||||||||||| ||| |||||||| |||||| |||||||| |||||||||||    
T  22049442 gaaagaaaactgaaaatatgtggaaatcacttattcaattaggatagaaggaaaaacaattcgaaagggtga-ttttgggtcaaaattaaccctaaatca 22049540  T
Q  113 ccc 115  Q
    |||    
T  22049541 ccc 22049543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 6882049 - 6881962
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttgg 91  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||| || ||| | |||||||||||||    
T  6882049 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttatttaattaggatagaaggaaaaataactcgaaggggtgatttttgg 6881962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 100
Target Start/End: Complemental strand, 50801304 - 50801214
Alignment:
Q  10 aaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| | || ||||||||| || ||||| | || |||||| ||||||||||    
T  50801304 aaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaataattcggaggagttatttttagatcaaaatt 50801214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 43493321 - 43493394
Alignment:
Q  10 aaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtg 83  Q
    |||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||    
T  43493321 aaacaaaagaaaacaaaaaatatgtgaaatcacttattcaattaagatagaaggaaaaacaattcggaggggtg 43493394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 12717145 - 12717255
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtg-aaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattga 102  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||| ||||| | |||||| |||||||| ||||| || ||| |||||| ||||||||||    
T  12717145 aaaaacaaacgaaagaaaactgaaaatatgtggaaatcacttatttaattaggatagaagaaaaaacaagtcggacggatga-ttttgggtcaaaattga 12717243  T
Q  103 ccctaaatcacc 114  Q
    | ||||||||||    
T  12717244 ctctaaatcacc 12717255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 20887784 - 20887889
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||| ||||||| ||||||||||||||||| ||||||| |||||  || || || ||||| ||||||||||||| |||||||||||    
T  20887784 aaaaacaaacgaaagaaagcagaaaa-atgtgaaatcacttattgaattaagatagaaaaaataataattcggatgggtgatttttgggtcaaaattgac 20887882  T
Q  104 cctaaat 110  Q
    | |||||    
T  20887883 cttaaat 20887889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 119
Target Start/End: Complemental strand, 3159137 - 3159021
Alignment:
Q  3 aaaaagcaaacgaaagaaaacagaaaatatgtgaaa-tcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattg 101  Q
    ||||| ||||||||||||| | |||||||||||||| ||||||||| ||||| | ||||||||||||||| ||||||  |||| |||||| | ||| |||    
T  3159137 aaaaaacaaacgaaagaaagctgaaaatatgtgaaaatcacttatttaattatgatagaaggaaaaacaactcggaatagtga-ttttgggtaaaagttg 3159039  T
Q  102 accctaaatcacccctct 119  Q
    ||||||||||| ||||||    
T  3159038 accctaaatcatccctct 3159021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 36124377 - 36124471
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaatt 100  Q
    |||| ||||||||||||||||  ||||||||||||||| | ||||||||||| ||| ||||||||||| | ||| | ||||||||||||||||||||    
T  36124377 aaaaacaaacgaaagaaaaca--aaatatgtgaaatcaatcattcaattaagataggaggaaaaacaattgggatgagtgatttttggatcaaaatt 36124471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 8517484 - 8517533
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaatta 53  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  8517484 aaaaacaaacgaaagaaaacagaaaatatgtaaaatcacttattcaatta 8517533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 140
Target Start/End: Complemental strand, 28837128 - 28837034
Alignment:
Q  44 tattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatcacccctctaacaagaagaagaagaaaggg 140  Q
    ||||| |||| | |||||||||||||||  |||| ||||||||||| | |||||||||| ||||||| ||| |||| |||| |||||||||||||||    
T  28837128 tattcgattaggatagaaggaaaaacaa--cggatgggtgattttttggtcaaaattgatcctaaattacctctctcacaaaaagaagaagaaaggg 28837034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 42197630 - 42197514
Alignment:
Q  19 aaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatcacccctc 118  Q
    |||||| |||||| ||||| ||||||||| ||||| | |||||||||||| || ||||||  |||||||||   |||||||| ||||||||||||||||     
T  42197630 aaaacaaaaaatacgtgaagtcacttattaaattaggatagaaggaaaaataattcggaa-agtgatttttttgtcaaaattaaccctaaatcaccccta 42197532  T
Q  119 taacaagaagaagaagaa 136  Q
    | | ||||| ||||||||    
T  42197531 tgaaaagaataagaagaa 42197514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 136
Target Start/End: Original strand, 13586284 - 13586395
Alignment:
Q  19 aaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatcacccctc 118  Q
    ||||||||||||||||||||||||||||||||||| | || ||| |||||||| | |||      |||||||  |||||||||||| |||||| |||  |    
T  13586284 aaaacagaaaatatgtgaaatcacttattcaattacgatataagaaaaaacaatttgga------atttttgagtcaaaattgaccataaatcgccctgc 13586377  T
Q  119 taacaagaagaagaagaa 136  Q
    | | ||||||||||||||    
T  13586378 tgaaaagaagaagaagaa 13586395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 2447893 - 2447809
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttt 88  Q
    |||| ||||| || ||||||| ||| |||||||||||||||||||||||| | |||||  ||||| || ||| | ||||||||||    
T  2447893 aaaaacaaactaatgaaaacataaattatgtgaaatcacttattcaattaggatagaaaaaaaaataattcgaaggggtgatttt 2447809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 32616859 - 32616895
Alignment:
Q  10 aaacgaaagaaaacagaaaatatgtgaaatcacttat 46  Q
    |||||||| |||||||||||||||||||||| |||||    
T  32616859 aaacgaaataaaacagaaaatatgtgaaatctcttat 32616895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 73 - 117
Target Start/End: Original strand, 55600585 - 55600629
Alignment:
Q  73 tcggaagggtgatttttggatcaaaattgaccctaaatcacccct 117  Q
    ||||| || |||||||||||||||| |||||||| ||||||||||    
T  55600585 tcggagggatgatttttggatcaaagttgacccttaatcacccct 55600629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 64 - 119
Target Start/End: Complemental strand, 56062032 - 56061977
Alignment:
Q  64 aaaaacaa-atcggaagggtgatttttggatcaaaattgaccctaaatcacccctct 119  Q
    |||||||| |||||| |||||||||| || ||||| |||||||||||||||||||||    
T  56062032 aaaaacaacatcggaggggtgattttcgg-tcaaagttgaccctaaatcacccctct 56061977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 113; Significance: 5e-57; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 12481398 - 12481530
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||     
T  12481398 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaggggtgatttttgggtcaaaattgat 12481497  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    |||||||||||||||| ||||||||||||||||    
T  12481498 cctaaatcacccctctgacaagaagaagaagaa 12481530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 23654343 - 23654211
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  23654343 aaaaacaaacgaaataaaacaaaaaatatgtgaaatcacttattcagttaaggtagaaggaaaaacaaatcggatgggtgatttttgggtcaaaattgac 23654244  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    ||||||||||| |||| ||||||||||||||||    
T  23654243 cctaaatcacctctctgacaagaagaagaagaa 23654211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 15590107 - 15590240
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||| || || ||||||||||||| |||||||||||    
T  15590107 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaagaaaaaacaattcagaggggtgatttttgggtcaaaattgac 15590206  T
Q  104 cctaaatcacccctctaacaagaagaagaagaaa 137  Q
    |||||||||||||||| | |||||||||||||||    
T  15590207 cctaaatcacccctctgaaaagaagaagaagaaa 15590240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 6419886 - 6420018
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||| ||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||| || || |||||||||||||||||||||||||    
T  6419886 aaaaacaaatgaaagaaaacaaaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcagaggggtgatttttggatcaaaattgac 6419985  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    |||||||||||||||| ||||||||||||||||    
T  6419986 cctaaatcacccctctgacaagaagaagaagaa 6420018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 8693685 - 8693821
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaatta--agg-tagaaggaaaaacaaatcggaagggtgatttttggatcaaaatt 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||| ||||| ||||||||||||| ||||||||    
T  8693685 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggaggatagaaggaaaaacaattcggatgggtgatttttgggtcaaaatt 8693784  T
Q  101 gaccctaaatcacccctctaacaagaagaagaagaaa 137  Q
    |||| |||||||||||||||| |||||||||||||||    
T  8693785 gaccttaaatcacccctctaaaaagaagaagaagaaa 8693821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 4 - 133
Target Start/End: Original strand, 21507836 - 21507965
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||| || | ||||||||||||||| | ||| ||||||| ||||| |||||||||||    
T  21507836 aaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaactaggatagaaggaaaaacaatttggaggggtgatgtttgggtcaaaattgac 21507935  T
Q  104 cctaaatcacccctctaacaagaagaagaa 133  Q
    |||||||||||||||||| |||||||||||    
T  21507936 cctaaatcacccctctaaaaagaagaagaa 21507965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 2304838 - 2304970
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| |  |||||| ||||||| || || || |||||||||| ||||||| ||     
T  2304838 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgacagaagggaaaacaactcagagggttgatttttgggtcaaaatcgat 2304937  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    |||||||||||||||||||||||| ||||||||    
T  2304938 cctaaatcacccctctaacaagaaaaagaagaa 2304970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 14783197 - 14783325
Alignment:
Q  1 acaaaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaatt 100  Q
    |||||||| ||| ||||||||||| ||||||||||||||||||||||||| || | ||||||||||||||| ||||| | ||||||||||| ||||||||    
T  14783197 acaaaaag-aaatgaaagaaaacaaaaaatatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggcgtgatttttgggtcaaaatt 14783295  T
Q  101 gaccctaaatcacccctctaacaagaagaa 130  Q
    |||||||||||| ||||||||  |||||||    
T  14783296 gaccctaaatcagccctctaaacagaagaa 14783325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 19402836 - 19402968
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||| | || |||||||||||| ||  | |||||||||||||||||||| ||||    
T  19402836 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttgttcaattatgatacaaggaaaaacaactcaaaggggtgatttttggatcaaaagtgac 19402935  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    || ||||||||||||  ||||  ||||||||||    
T  19402936 ccgaaatcacccctcagacaaagagaagaagaa 19402968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 4921909 - 4922042
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaaca--aatcggaagggtgatttttggatcaaaattg 101  Q
    |||| ||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||| |  | | ||| |||| |||||||| |||||||||    
T  4921909 aaaaacaaacgaaataaaactgaaaatatgtgaaatcacttattcaattaagatagaaggaaaaaaactactgggaggggt-atttttgggtcaaaattg 4922007  T
Q  102 accctaaatcacccctctaacaagaagaagaagaa 136  Q
    |||||||||||||||| |||| |||||||||||||    
T  4922008 accctaaatcacccctttaacgagaagaagaagaa 4922042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 4 - 149
Target Start/End: Original strand, 6296277 - 6296425
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaagg-aaaaacaaatcggaagggtga--tttttggatcaaaatt 100  Q
    |||| |||||||||||||  ||||||||||||||| |||||||||||||| ||||||||| |||||||| |||||||  |||  ||||| | ||||||||    
T  6296277 aaaaacaaacgaaagaaactagaaaatatgtgaaaccacttattcaattagggtagaaggaaaaaacaattcggaagaatgatttttttaggtcaaaatt 6296376  T
Q  101 gaccctaaatcacccctctaacaagaagaagaagaaagggggcgacggc 149  Q
     || ||||||||||||||||| ||||||||||||||| |||| ||||||    
T  6296377 aactctaaatcacccctctaaaaagaagaagaagaaaaggggtgacggc 6296425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 4 - 149
Target Start/End: Original strand, 6303087 - 6303235
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaagg-aaaaacaaatcggaagggtga--tttttggatcaaaatt 100  Q
    |||| |||||||||||||  ||||||||||||||| |||||||||||||| ||||||||| |||||||| |||||||  |||  ||||| | ||||||||    
T  6303087 aaaaacaaacgaaagaaactagaaaatatgtgaaaccacttattcaattagggtagaaggaaaaaacaattcggaagaatgatttttttaggtcaaaatt 6303186  T
Q  101 gaccctaaatcacccctctaacaagaagaagaagaaagggggcgacggc 149  Q
     || ||||||||||||||||| ||||||||||||||| |||| ||||||    
T  6303187 aactctaaatcacccctctaaaaagaagaagaagaaaaggggtgacggc 6303235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 35219937 - 35220063
Alignment:
Q  9 caaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaa 108  Q
    ||||| |||||||||||||||||||||| ||||||||||| |||  | ||||||||||| ||| | ||| ||||||||||||  ||||||||||||||||    
T  35219937 caaacaaaagaaaacagaaaatatgtgatatcacttattcgattcggatagaaggaaaa-caacttggaggggtgatttttgagtcaaaattgaccctaa 35220035  T
Q  109 atcacccctctaacaagaagaagaagaa 136  Q
    |||||||||| || ||||||||||||||    
T  35220036 atcacccctccaagaagaagaagaagaa 35220063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 31937448 - 31937557
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||| ||| ||||||||||||||||||||||||||||||| | |||||| |||||||| ||||| ||||||||||||| |||||| ||||    
T  31937448 aaaaacaaacgaaa-aaatcagaaaatatgtgaaatcacttattcaattaggatagaag-aaaaacaattcggaggggtgatttttgggtcaaaactgac 31937545  T
Q  104 cctaaatcaccc 115  Q
    ||||||||||||    
T  31937546 cctaaatcaccc 31937557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 23638151 - 23638221
Alignment:
Q  9 caaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaag 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| | |||||||    
T  23638151 caaacgaaagaaaacagaaaatatgtgaaatcacttattcaattattgtagaaggaaaaacgactcggaag 23638221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 57 - 138
Target Start/End: Complemental strand, 4085058 - 4084977
Alignment:
Q  57 tagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatcacccctctaacaagaagaagaagaaag 138  Q
    ||||||||||||||| |||||||| |||||||| | ||||||||||||||||||||||||||| | || ||||| |||||||    
T  4085058 tagaaggaaaaacaattcggaaggatgatttttcggtcaaaattgaccctaaatcacccctctcagaaaaagaaaaagaaag 4084977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 29927447 - 29927539
Alignment:
Q  44 tattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatcacccctctaacaagaagaagaagaa 136  Q
    |||||||||| | ||||||||||||||| | ||| | ||||||||||| |||||||||||| |||||||| | ||| ||||||||||||||||    
T  29927447 tattcaattaggatagaaggaaaaacaacttggaggagtgatttttgggtcaaaattgaccataaatcactcatctgacaagaagaagaagaa 29927539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 4393863 - 4393777
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttg 90  Q
    |||| |||||||||||||| ||||||||||||||||||||| ||| |||| | ||||||| ||||||| || || ||||||||||||    
T  4393863 aaaaacaaacgaaagaaaaaagaaaatatgtgaaatcacttgttctattaggatagaaggtaaaacaactcagaggggtgatttttg 4393777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 15057764 - 15057725
Alignment:
Q  14 gaaagaaaacagaaaatatgtgaaatcacttattcaatta 53  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  15057764 gaaagaaaacagaaaatatgtgaaatcacgtattcaatta 15057725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 31937565 - 31937626
Alignment:
Q  9 caaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaa 71  Q
    ||||||||| |||||||||||||||| |||||||||||||||||| | |||| | ||||||||    
T  31937565 caaacgaaa-aaaacagaaaatatgttaaatcacttattcaattaggatagatgaaaaaacaa 31937626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 29927122 - 29927163
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcactta 45  Q
    |||| |||||||||||||||||||||| ||||||||||||||    
T  29927122 aaaaacaaacgaaagaaaacagaaaatttgtgaaatcactta 29927163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 31705258 - 31705209
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaatta 53  Q
    ||||||||||| ||||||| |||||||||||||||| | |||||||||||    
T  31705258 aaaagcaaacggaagaaaatagaaaatatgtgaaattatttattcaatta 31705209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 95 - 123
Target Start/End: Original strand, 13234209 - 13234237
Alignment:
Q  95 aaaattgaccctaaatcacccctctaaca 123  Q
    |||||||||||||||||||||||||||||    
T  13234209 aaaattgaccctaaatcacccctctaaca 13234237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 5e-57; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 48652476 - 48652608
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||    
T  48652476 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaggggtgatttttgggtcaaagttgac 48652575  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    |||||||||||||||| ||||||||||||||||    
T  48652576 cctaaatcacccctctgacaagaagaagaagaa 48652608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 4 - 149
Target Start/End: Original strand, 32080790 - 32080938
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  32080790 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacctattcaattaaggtagaaggaaaaacaaatcggaggggtgatttttgggtcaaaattgac 32080889  T
Q  104 cctaaatcacccctct---aacaagaagaagaagaaagggggcgacggc 149  Q
    |||||||||||| |||   |||||||||||||||||| |||||||||||    
T  32080890 cctaaatcacccatctgacaacaagaagaagaagaaatggggcgacggc 32080938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 4 - 146
Target Start/End: Original strand, 55090619 - 55090761
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |  ||||| ||    
T  55090619 aaaaacaaatgaaagaaaacagaaaatatgtgaaatcacttatttaattaaggtagaaggaaaaacaaatcggaggggtgatttttgggttgaaattaac 55090718  T
Q  104 cctaaatcacccctctaacaagaagaagaagaaagggggcgac 146  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  55090719 cctaaatcacccctctgacaagaagaagaagaaagggggcgac 55090761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 11819176 - 11819056
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  11819176 aaaaacaaatgaaagaaaacataaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaggggtgatttttgggtcaaaattgac 11819077  T
Q  104 cctaaatcacccctctaacaa 124  Q
    |||||||||||||||| ||||    
T  11819076 cctaaatcacccctctgacaa 11819056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 36691835 - 36691967
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||| || ||||| ||||||||||||| |||||||||||    
T  36691835 aaaaacaaacgaaaggaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaataactcggaggggtgatttttgggtcaaaattgac 36691934  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    |||||||||||||||| |||||||| |||||||    
T  36691935 cctaaatcacccctctgacaagaaggagaagaa 36691967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 48400992 - 48400860
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||||| |||||||||||||||||||||| || || ||||||||||||||||| || || | ||||||||||| |||||||||||    
T  48400992 aaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattaaaatagggtagaaggaaaaacaattccgatgtgtgatttttgggtcaaaattgac 48400893  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    |||||||||||||||||| ||||||||||||||    
T  48400892 cctaaatcacccctctaaaaagaagaagaagaa 48400860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 31270419 - 31270286
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||| || ||| | ||||||||||||| |||||||||||    
T  31270419 aaaaacaaacgaaagaaaacataaaatatgtgaaatcacttattcaattaggatagaaggaaaaataattcgaaggggtgatttttgggtcaaaattgac 31270320  T
Q  104 cctaaatcacccctctaacaagaagaagaagaaa 137  Q
    |||||||||||| ||||| ||||| |||||||||    
T  31270319 cctaaatcacccatctaaaaagaataagaagaaa 31270286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 31462782 - 31462915
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||| |||||||||||||||||||| |||||||||||||||||| | || |||||||||||| ||| | ||||||||||||| |||||||||||    
T  31462782 aaaaacaaacaaaagaaaacagaaaatatgtaaaatcacttattcaattaggatataaggaaaaacaattcgaaggggtgatttttgggtcaaaattgac 31462881  T
Q  104 cctaaatcacccctctaacaagaagaagaagaaa 137  Q
    |||||||||||||||| | |||||||||||||||    
T  31462882 cctaaatcacccctctgaaaagaagaagaagaaa 31462915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 4 - 133
Target Start/End: Original strand, 53155466 - 53155595
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||||| |||||||||||||||||||||| ||||| | || |||||||||||| ||| | ||||||||||||| |||||||||||    
T  53155466 aaaaacaaacgaaagaaaacataaaatatgtgaaatcacttattgaattaggatataaggaaaaacaattcgaatgggtgatttttgggtcaaaattgac 53155565  T
Q  104 cctaaatcacccctctaacaagaagaagaa 133  Q
    |||||||||||||||||| |||||||||||    
T  53155566 cctaaatcacccctctaaaaagaagaagaa 53155595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 3457036 - 3456904
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||| ||||||||||| ||||||||| |||||||||||||||||| | ||||||||||||||| |||||  ||||||||||||||||||||||||    
T  3457036 aaaaacaaaggaaagaaaacaaaaaatatgttaaatcacttattcaattaggatagaaggaaaaacaattcggagaggtgatttttggatcaaaattgac 3456937  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    | |||||||||||||| | ||||||||||||||    
T  3456936 cataaatcacccctctgaaaagaagaagaagaa 3456904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 13702008 - 13702140
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||| | ||||| |||||| || ||| | |||||| |||||| |||||||||||    
T  13702008 aaaaacaaatgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaaagaaaaataattcgaaggggtgacttttgggtcaaaattgac 13702107  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    |||||||||||||||| | ||||||||||||||    
T  13702108 cctaaatcacccctctgaaaagaagaagaagaa 13702140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 4 - 128
Target Start/End: Complemental strand, 38527356 - 38527232
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| | ||| | ||||||||||| |||| |||||     
T  38527356 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcatttattcaattaagatagaaggaaaaacaatttggatgtgtgatttttggttcaagattgat 38527257  T
Q  104 cctaaatcacccctctaacaagaag 128  Q
    |||||||||||||||||| ||||||    
T  38527256 cctaaatcacccctctaaaaagaag 38527232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 4 - 141
Target Start/End: Original strand, 34960894 - 34961031
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||   |||||| |||||||| || || ||||||||||||| |||||||||||    
T  34960894 aaaaacaaacgaaagaaaacataaaatatgtgaaatcacttattcaattagaatagaagaaaaaacaattctgaggggtgatttttgggtcaaaattgac 34960993  T
Q  104 cctaaatcacccctctaacaagaagaagaagaaagggg 141  Q
    ||||| |||||||||| | |||||||| ||| ||||||    
T  34960994 cctaagtcacccctctgaaaagaagaaaaagtaagggg 34961031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 4 - 132
Target Start/End: Complemental strand, 14585555 - 14585427
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |  || | ||||||||||| |||||||||||    
T  14585555 aaaaacaaacaaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaatttagaggagtgatttttgggtcaaaattgac 14585456  T
Q  104 cctaaatcacccctctaacaagaagaaga 132  Q
     ||||||||||||||| | ||||||||||    
T  14585455 tctaaatcacccctctgaaaagaagaaga 14585427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 1074935 - 1075061
Alignment:
Q  9 caaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaa 108  Q
    |||||||||||||||||||||  |||||| |||||||||||||||   || |||||||||||| ||||| ||||||||||||| |||||||||||| |||    
T  1074935 caaacgaaagaaaacagaaaacgtgtgaa-tcacttattcaattagaatataaggaaaaacaactcggatgggtgatttttgggtcaaaattgaccataa 1075033  T
Q  109 atcacccctctaacaagaagaagaagaa 136  Q
    ||||||||||| ||||||||||||||||    
T  1075034 atcacccctctgacaagaagaagaagaa 1075061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 19 - 141
Target Start/End: Original strand, 27189445 - 27189566
Alignment:
Q  19 aaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatcacccctc 118  Q
    |||||||||| |||||||||| ||||||||||||| | ||||||||||||||| ||||||| || |||||||||||||||||||| ||||||||||||||    
T  27189445 aaaacagaaattatgtgaaattacttattcaattaggatagaaggaaaaacaattcggaagagtaatttttggatcaaaattgactctaaatcacccctc 27189544  T
Q  119 taacaagaagaagaagaaagggg 141  Q
    | ||||  |||||||||||||||    
T  27189545 t-acaaagagaagaagaaagggg 27189566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 4 - 133
Target Start/End: Original strand, 49628123 - 49628253
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||| || | ||||||||||||||| || || ||||||||||| | |||||||||||    
T  49628123 aaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaactaggatagaaggaaaaacaattcagaggggtgatttttaggtcaaaattgac 49628222  T
Q  104 cc-taaatcacccctctaacaagaagaagaa 133  Q
    ||  ||||||||||||||| |||||||||||    
T  49628223 ccaaaaatcacccctctaaaaagaagaagaa 49628253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 35174797 - 35174664
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||| ||  | ||||||||||||| || ||||||||    
T  35174797 aaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcaaaggggtgatttttgggtcgaaattgac 35174698  T
Q  104 cctaaatcacccctctaacaagaagaagaagaaa 137  Q
    ||| ||| |||||| | | |||||||||||||||    
T  35174697 ccttaataacccctatgaaaagaagaagaagaaa 35174664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 40013308 - 40013443
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaatta--agg-tagaaggaaaaacaaatcggaagggtgatttttggatcaaaatt 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||| ||| | ||||||||||||| ||||||||    
T  40013308 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggaggatagaaggaaaaacaattcgaatgggtgatttttgggtcaaaatt 40013407  T
Q  101 gaccctaaatcacccctctaacaagaagaagaagaaa 137  Q
    ||| |||||||| || ||| | |||||||||||||||    
T  40013408 gacactaaatca-ccatctgaaaagaagaagaagaaa 40013443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 54239054 - 54239167
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||| | ||||||||| ||||||| || ||    
T  54239054 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggatgtgtgattttttgatcaaatttaac 54239153  T
Q  104 cctaaatcacccct 117  Q
    | ||||||||||||    
T  54239154 cttaaatcacccct 54239167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 4206547 - 4206679
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||| |||||||| | ||||||||||||| |||||||||||||| | || | |||||||||| ||||| ||||||||||| |||||||||||||    
T  4206547 aaaaacaaacaaaagaaaataaaaaatatgtgaaaacacttattcaattaggatatatggaaaaacaattcggaggggtgattttttgatcaaaattgac 4206646  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    | |||||||||||||||| |||| |||||||||    
T  4206647 cataaatcacccctctaaaaagaggaagaagaa 4206679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 10 - 130
Target Start/End: Original strand, 30156324 - 30156443
Alignment:
Q  10 aaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaa 109  Q
    |||||||||||| || |||||||||||||||||||||||||||| | || |||||||| ||| ||||| ||||||||||||| |||||||||||||||||    
T  30156324 aaacgaaagaaatcataaaatatgtgaaatcacttattcaattaggataaaaggaaaa-caattcggaggggtgatttttgggtcaaaattgaccctaaa 30156422  T
Q  110 tcacccctctaacaagaagaa 130  Q
    |||||||||| | ||||||||    
T  30156423 tcacccctctgaaaagaagaa 30156443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 4 - 141
Target Start/End: Complemental strand, 39610305 - 39610160
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaa--------aaacaaatcggaagggtgatttttggatca 95  Q
    |||| |||||||||| ||||| |||||||||||||||||||||||||||| | |||||||||        |||||| ||||| |||||||| |||| |||    
T  39610305 aaaaacaaacgaaaggaaacaaaaaatatgtgaaatcacttattcaattaggatagaaggaagaaaaaaaaaacaactcggaggggtgattattgggtca 39610206  T
Q  96 aaattgaccctaaatcacccctctaacaagaagaagaagaaagggg 141  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||    
T  39610205 aaattgaccataaatcacccctctgacaagaagaagaagaaagggg 39610160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 41868330 - 41868442
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaagg-aaaaacaaatcggaagggtgatttttggatcaaaattga 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||| || || | |||||||||||||||||||| |    
T  41868330 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaaacaactcagatgagtgatttttggatcaaaattta 41868429  T
Q  103 ccctaaatcaccc 115  Q
     ||||||||||||    
T  41868430 tcctaaatcaccc 41868442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 36624730 - 36624856
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||| ||||||||||||||||||||||||||||||||| | ||| | ||||||||||||||| ||||| ||||||||||||| |||  ||||||    
T  36624730 aaaaacaaacaaaagaaaacagaaaatatgtgaaatcacttatttagttaggatagaaggaaaaacaattcggatgggtgatttttgggtcatgattgac 36624829  T
Q  104 cctaaatcacccctctaacaagaagaa 130  Q
    ||| |||||||||||| | ||||||||    
T  36624830 cctgaatcacccctctgaaaagaagaa 36624856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 22485058 - 22484961
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattg 101  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||  |||||| ||||||||||| |||||||||    
T  22485058 aaaaacaaacgaaagaaaacagaaaatatgcgaaatcacttattcaattaggatagaaggaaaaacaatccggaagagtgatttttgggtcaaaattg 22484961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 40883904 - 40884018
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaagg-aaaaacaaatcggaagggtgatttttggatcaaaattga 102  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||| | || |||| |||||||| ||| |  | |||||||||| ||||||||||    
T  40883904 aaaaacaaacgaaagaaaacagaaaataagtgaaatcacttattcaattaggataaaaggaaaaaacaattcgaattgatgatttttgggtcaaaattga 40884003  T
Q  103 ccctaaatcacccct 117  Q
    |||||||||||||||    
T  40884004 ccctaaatcacccct 40884018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 10 - 78
Target Start/End: Complemental strand, 33637490 - 33637422
Alignment:
Q  10 aaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaa 78  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  33637490 aaacgaaagaaaacagaaaatatgtgaaatcttttattcaattaaggtagaaggaaaaacaaatcggaa 33637422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 4 - 131
Target Start/End: Complemental strand, 19645314 - 19645187
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||| |||| ||||||||||||||||||||||||||||| ||||| |  ||||| |||||||| ||||| || || ||||| | |||||||||||    
T  19645314 aaaaacaaaggaaaaaaaacagaaaatatgtgaaatcacttatttaattaggacagaagaaaaaacaattcggatggatggtttttaggtcaaaattgac 19645215  T
Q  104 cctaaatcacccctctaacaagaagaag 131  Q
    |||||||||||| ||||| ||| |||||    
T  19645214 cctaaatcacccttctaaaaagtagaag 19645187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 18 - 136
Target Start/End: Original strand, 24483728 - 24483846
Alignment:
Q  18 gaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatcacccct 117  Q
    |||||||||||||||||||||||||||||||||||| | ||||| ||||||||| || || ||||||||| ||  ||||||||||| | |||||||| ||    
T  24483728 gaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcagatgggtgatttgtgtgtcaaaattgactccaaatcacctct 24483827  T
Q  118 ctaacaagaagaagaagaa 136  Q
    |  | ||||||||||||||    
T  24483828 cagaaaagaagaagaagaa 24483846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 36 - 147
Target Start/End: Complemental strand, 53402691 - 53402580
Alignment:
Q  36 aaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatcacccctctaacaagaagaagaaga 135  Q
    |||||||||||| |||||   ||||||||||||||| ||||| ||||||||||||| |||||||||||| |||||||| | | ||| |||||||||||||    
T  53402691 aaatcacttattgaattagaatagaaggaaaaacaattcggatgggtgatttttgggtcaaaattgaccttaaatcactcatttaaaaagaagaagaaga 53402592  T
Q  136 aagggggcgacg 147  Q
    || |||| ||||    
T  53402591 aaaggggtgacg 53402580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 34103753 - 34103804
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaag 55  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  34103753 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaag 34103804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 106071 - 106187
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaa-tcacttattcaattaaggtagaaggaaaaacaaatcg-gaagggtgatttttggatcaaaattg 101  Q
    |||| |||||||||||||||  ||||||||||||| ||||||||| ||||| ||||||| |||||||||  ||    |||||| ||||||||| ||||||    
T  106071 aaaaacaaacgaaagaaaactaaaaatatgtgaaaatcacttatttaattagggtagaatgaaaaacaacccgatgggggtga-ttttggatcgaaattg 106169  T
Q  102 accctaaatcacccctct 119  Q
    ||||||||||||||||||    
T  106170 accctaaatcacccctct 106187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 19861331 - 19861433
Alignment:
Q  19 aaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatcacccctc 118  Q
    ||||||| |||||||||||||||||||||||||| | |  |||||| |||||| ||  | ||||||||||||  |||||||||||||||||||||| |||    
T  19861331 aaaacaggaaatatgtgaaatcacttattcaatt-atgaggaaggacaaacaactc--atgggtgatttttgagtcaaaattgaccctaaatcacctctc 19861427  T
Q  119 taacaa 124  Q
    | ||||    
T  19861428 tgacaa 19861433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 4817871 - 4817933
Alignment:
Q  9 caaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaa 71  Q
    |||||||||||||| ||||||||||||||||||| |||||||||| | || || |||||||||    
T  4817871 caaacgaaagaaaatagaaaatatgtgaaatcacctattcaattaggataaaaagaaaaacaa 4817933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 3312536 - 3312487
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaatta 53  Q
    |||| |||||||||||||||  ||||||||||||||||||||||||||||    
T  3312536 aaaaacaaacgaaagaaaacttaaaatatgtgaaatcacttattcaatta 3312487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 33637423 - 33637383
Alignment:
Q  96 aaattgaccctaaatcacccctctaacaagaagaagaagaa 136  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  33637423 aaattgaccctaaatcacccctctgacaagaagaagaagaa 33637383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 48854939 - 48854867
Alignment:
Q  64 aaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatcacccctctaacaagaagaagaagaa 136  Q
    |||||||||||||| ||||||||||||| | ||||||||||| |||||||| |||  |||| ||||| |||||    
T  48854939 aaaaacaaatcggaggggtgatttttgggttaaaattgacccaaaatcacctctccgacaaaaagaaaaagaa 48854867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 2147820 - 2147756
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtg-aaatcacttattcaattaaggtagaaggaaaa 67  Q
    |||| |||| |||||||||| ||||||||||| |||||||||||||||||| | ||||| |||||    
T  2147820 aaaaacaaatgaaagaaaactgaaaatatgtggaaatcacttattcaattaggatagaacgaaaa 2147756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 4219273 - 4219169
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtg-aaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattga 102  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||| || ||| |  |||||||| |||| ||||| | |||||||  || ||||||||||    
T  4219273 aaaaacaaacgaaagaaaactgaaaatatgtgaaaatcacttatttaactaaag--gaaggaaatacaattcggatgagtgatttcagg-tcaaaattga 4219177  T
Q  103 ccctaaat 110  Q
    || |||||    
T  4219176 ccataaat 4219169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 138
Target Start/End: Complemental strand, 45664251 - 45664198
Alignment:
Q  86 ttttggatcaaaatt-gaccctaaatcacccctctaacaagaagaagaagaaag 138  Q
    |||||| |||||||| || ||||||||||||||||| ||| |||||||||||||    
T  45664251 ttttgggtcaaaatttgatcctaaatcacccctctagcaaaaagaagaagaaag 45664198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 54706715 - 54706752
Alignment:
Q  15 aaagaaaacagaaaatatgtgaaatcacttattcaatt 52  Q
    |||||||| |||||||||||||||||||||||| ||||    
T  54706715 aaagaaaatagaaaatatgtgaaatcacttattgaatt 54706752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 111; Significance: 9e-56; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 4 - 149
Target Start/End: Complemental strand, 17331421 - 17331273
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||    
T  17331421 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaagatagaaggaaaaacaaatcggaggggtgatttttgggtcaaaattgac 17331322  T
Q  104 cctaaatcacccctctaacaagaagaaga---agaaagggggcgacggc 149  Q
    |||||||||||||||| |||| |||||||   |||||||||||||||||    
T  17331321 cctaaatcacccctctgacaacaagaagaagaagaaagggggcgacggc 17331273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 4 - 140
Target Start/End: Complemental strand, 29097882 - 29097746
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||    
T  29097882 aaaaacaaactaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaggggtgatctttgggtcaaaattgac 29097783  T
Q  104 cctaaatcacccctctaacaagaagaagaagaaaggg 140  Q
    ||||||||||||||   ||||||||||||||||||||    
T  29097782 cctaaatcacccctaggacaagaagaagaagaaaggg 29097746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 4 - 141
Target Start/End: Complemental strand, 43493965 - 43493828
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||   ||||||||||||||| |||||  ||||||||||||||||||||||||    
T  43493965 aaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaattagaatagaaggaaaaacaattcggagaggtgatttttggatcaaaattgac 43493866  T
Q  104 cctaaatcacccctctaacaagaagaagaagaaagggg 141  Q
    |||||||||||||||||| |||||||| |||| |||||    
T  43493865 cctaaatcacccctctaaaaagaagaaaaagagagggg 43493828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 33164496 - 33164628
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||  |||||||||||    
T  33164496 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaattcggaggagtgatttttgagtcaaaattgac 33164595  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    | |||||||||||||| |||| || ||||||||    
T  33164596 cataaatcacccctctgacaacaacaagaagaa 33164628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 17699646 - 17699513
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||| ||||| ||||||||||||| |||||||||||    
T  17699646 aaaaacaaacgaaagaaaacagaaaagatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggaggggtgatttttgggtcaaaattgac 17699547  T
Q  104 cctaaatcacccctctaacaagaagaagaagaaa 137  Q
    |||||||||| | ||| | |||||||||||||||    
T  17699546 cctaaatcactcatctgaaaagaagaagaagaaa 17699513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 28040722 - 28040588
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||| | | ||| ||||||||||||| |||||||||||    
T  28040722 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatataaggaaaaacgatttggaggggtgatttttgggtcaaaattgac 28040623  T
Q  104 cctaaatcacccctctaacaagaagaagaagaaag 138  Q
    | |||||||||||||| | ||||||||||||||||    
T  28040622 cgtaaatcacccctctgaaaagaagaagaagaaag 28040588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 6635343 - 6635210
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcgga-agggtgatttttggatcaaaattga 102  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| || || |||||||||||||| |||||||||     
T  6635343 aaaaacaaactaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaaggaaaaacaactcagagagggtgatttttgggtcaaaattgg 6635244  T
Q  103 ccctaaatcacccctctaacaagaagaagaagaa 136  Q
    |||||||||| |||||| |||||||| |||||||    
T  6635243 ccctaaatcatccctctgacaagaaggagaagaa 6635210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 4 - 133
Target Start/End: Complemental strand, 27241157 - 27241028
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||| || || ||||||||||||| ||||||||||     
T  27241157 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaattcagaggggtgatttttgggtcaaaattgat 27241058  T
Q  104 cctaaatcacccctctaacaagaagaagaa 133  Q
    | |||||||||| ||||| |||||||||||    
T  27241057 cataaatcacccatctaaaaagaagaagaa 27241028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 6281137 - 6281005
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||| ||||||||||| ||||||||||||||||||   |||||||||||| || || || ||||||||||||| |||||||||||    
T  6281137 aaaaacaaacgaaagaaaatagaaaatatgtaaaatcacttattcaattagaatagaaggaaaaataattcagaggggtgatttttgggtcaaaattgac 6281038  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    | |||||||||||||||| ||||||||||||||    
T  6281037 cataaatcacccctctaaaaagaagaagaagaa 6281005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 4 - 133
Target Start/End: Original strand, 17096267 - 17096399
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaagg---aaaaacaaatcggaagggtgatttttggatcaaaatt 100  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||| | |||||||   |||||||| | ||| |||||||| |||| ||||||||    
T  17096267 aaaaacaaacgaaaggaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaaaaacaactgggaggggtgattattgggtcaaaatt 17096366  T
Q  101 gaccctaaatcacccctctaacaagaagaagaa 133  Q
    ||||||||||||||||||| |||||||||||||    
T  17096367 gaccctaaatcacccctctgacaagaagaagaa 17096399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 32347742 - 32347874
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaagg-aaaaacaaatcggaagggtgatttttggatcaaaattga 102  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||| | ||||||| |||||||| ||||| ||||||||||||| ||||| ||||    
T  32347742 aaaaacaaacgaaataaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaaacaagtcggaggggtgatttttgggtcaaagttga 32347841  T
Q  103 ccctaaatcacccctctaacaagaagaagaagaa 136  Q
    ||||||||||||||||| | ||||| ||||||||    
T  32347842 ccctaaatcacccctctgaaaagaa-aagaagaa 32347874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 26295086 - 26295218
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||| ||||||||| ||||||| ||| |||||||||||||||| | | ||||||||||||||  ||||| |||||||||||||||||||||||||    
T  26295086 aaaaacaaaagaaagaaaatagaaaatttgttaaatcacttattcaataaggatagaaggaaaaacacttcggaggggtgatttttggatcaaaattgac 26295185  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    ||||||||||| |||||| | ||||||||||||    
T  26295186 cctaaatcacctctctaaaatgaagaagaagaa 26295218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 34431153 - 34431045
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||| ||| | ||||||||||||| |||||||||||    
T  34431153 aaaatcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaaatagaagaaaaaacaattcgaatgggtgatttttgggtcaaaattgac 34431054  T
Q  104 cctaaatca 112  Q
    |||||||||    
T  34431053 cctaaatca 34431045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 3740445 - 3740319
Alignment:
Q  9 caaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaa 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||| || || || |||||||||  |||||||| |||||||    
T  3740445 caaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaagg-aaaacaattcagatggatgatttttgagtcaaaattaaccctaa 3740347  T
Q  109 atcacccctctaacaagaagaagaagaa 136  Q
    ||||| ||||| | ||||||||||||||    
T  3740346 atcacacctctgaaaagaagaagaagaa 3740319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 42609237 - 42609127
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||| |||||||| |||||||||||||||||||||||||||||| | |||||| |||||||| ||||| | ||||||||| | |||||||||||    
T  42609237 aaaaacaaacaaaagaaaatagaaaatatgtgaaatcacttattcaattaggatagaagaaaaaacaattcggatgagtgatttttaggtcaaaattgac 42609138  T
Q  104 cctaaatcacc 114  Q
    |||||||||||    
T  42609137 cctaaatcacc 42609127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 20483279 - 20483147
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaagg-tagaaggaaaaacaaatcggaagggtgatttttggatcaaaattga 102  Q
    |||| ||||| ||| |||||||||||||||||||||||||||||||| | ||  || |||||||||||| | ||| ||||||||||||| ||||||||||    
T  20483279 aaaaacaaacaaaacaaaacagaaaatatgtgaaatcacttattcaaattagaataaaaggaaaaacaatttgga-gggtgatttttgggtcaaaattga 20483181  T
Q  103 ccctaaatcacccctctaacaagaagaagaagaa 136  Q
     ||||||||||||||| || ||||||||||||||    
T  20483180 tcctaaatcacccctccaaaaagaagaagaagaa 20483147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 27 - 138
Target Start/End: Original strand, 981076 - 981187
Alignment:
Q  27 aaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatcacccctctaacaaga 126  Q
    |||||||||||||||||  |||||||| | ||||||||||||||| ||||| ||| |||| |||| |||||||||| |||||||||||| ||||| ||||    
T  981076 aaatatgtgaaatcactcgttcaattatgatagaaggaaaaacaactcggaggggcgattattgggtcaaaattgatcctaaatcacccttctaaaaaga 981175  T
Q  127 agaagaagaaag 138  Q
    ||||||||||||    
T  981176 agaagaagaaag 981187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 4 - 133
Target Start/End: Complemental strand, 17687298 - 17687177
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||| ||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||| |||||  ||||| |||||||       ||||    
T  17687298 aaaaacaaacaaaagaaaactgaaaatatgtgaaataacttattcaattaagatagaaggaaaaacaactcggattggtga-ttttgga-------tgac 17687207  T
Q  104 cctaaatcacccctctaacaagaagaagaa 133  Q
    ||||||||||||||||||||||||||||||    
T  17687206 cctaaatcacccctctaacaagaagaagaa 17687177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 178134 - 178244
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||| | || ||||||| |||| |||||  |||||||||||  |||||||||||    
T  178134 aaaaacaaacgaaagaaaacataaaatatgtgaaatcacttattcaattaggatataaggaaacacaactcggagaggtgatttttgagtcaaaattgac 178233  T
Q  104 cctaaatcacc 114  Q
    | |||||||||    
T  178234 cttaaatcacc 178244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 4 - 133
Target Start/End: Original strand, 42396540 - 42396670
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||| ||||||||||| ||||||||||||||| |||||||||||||| |||||| ||||| || ||| || | |||||||||| |||||||||||    
T  42396540 aaaaacaaatgaaagaaaacaaaaaatatgtgaaatcgcttattcaattaagatagaagaaaaaataattcgaaaagatgatttttgggtcaaaattgac 42396639  T
Q  104 cc-taaatcacccctctaacaagaagaagaa 133  Q
    || ||||| ||| |||||| |||||||||||    
T  42396640 ccataaataaccactctaaaaagaagaagaa 42396670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 4 - 133
Target Start/End: Original strand, 12439662 - 12439790
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||||| ||||||| ||||||||||||||||| || | ||||| ||||||||| |||| |||||||||||| | ||||||||  |    
T  12439662 aaaaacaaacgaaagaaaacaaaaaatatatgaaatcacttattcaactaggatagaatgaaaaacaattcgg-agggtgatttttaggtcaaaattatc 12439760  T
Q  104 cctaaatcacccctctaacaagaagaagaa 133  Q
    ||||||||||| ||| || |||||||||||    
T  12439761 cctaaatcacctctcaaaaaagaagaagaa 12439790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 58 - 133
Target Start/End: Original strand, 7771888 - 7771963
Alignment:
Q  58 agaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatcacccctctaacaagaagaagaa 133  Q
    |||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  7771888 agaaggaaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcacccctctaaaaagaagaagaa 7771963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 4 - 141
Target Start/End: Original strand, 39531432 - 39531566
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||| |||||||||||||| |||||||||||||||||||||||| | ||||||| ||||||| ||||| || ||| |||||| |||||||||||    
T  39531432 aaaaacaaacaaaagaaaacagaaa-tatgtgaaatcacttattcaattacgatagaagg-aaaacaactcggagggatga-ttttgggtcaaaattgac 39531528  T
Q  104 cctaaatcacccctctaacaagaagaagaagaaagggg 141  Q
    | |||||||||| ||| | |||| |||||| |||||||    
T  39531529 cttaaatcacccatctgagaagatgaagaataaagggg 39531566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 25 - 136
Target Start/End: Original strand, 6681923 - 6682034
Alignment:
Q  25 gaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatcacccctctaacaa 124  Q
    |||||||||||||||||||||||||||| || || |||||||||||| ||| | | |||||||||||  |||| ||||| ||||||||||| |||  |||    
T  6681923 gaaaatatgtgaaatcacttattcaattcagataaaaggaaaaacaactcgaatgagtgatttttgggccaaatttgactctaaatcacccttctcgcaa 6682022  T
Q  125 gaagaagaagaa 136  Q
    ||||||||||||    
T  6682023 gaagaagaagaa 6682034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 23882144 - 23882259
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||| |||||| | ||||||||| |||||||||||||||||  | ||||| ||||||||| | |||  | ||||||||| ||||||||||||    
T  23882144 aaaaacaaacgatagaaaatataaaatatgtcaaatcacttattcaatttggatagaaagaaaaacaatttggattgatgatttttgaatcaaaattgac 23882243  T
Q  104 cctaaatcacccctct 119  Q
    ||||||||||||||||    
T  23882244 cctaaatcacccctct 23882259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 39179856 - 39179939
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgattt 87  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||   |||||||||||| || ||||| |||||||||    
T  39179856 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattagaatagaaggaaaaataattcggaggggtgattt 39179939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 3079333 - 3079413
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtga 84  Q
    |||| ||||||||| ||| |||||||||||| |||||||||||||||||| | || |||||||||||||||||| ||||||    
T  3079333 aaaaacaaacgaaaaaaagcagaaaatatgttaaatcacttattcaattatgatataaggaaaaacaaatcggaggggtga 3079413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 12891769 - 12891706
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaa 67  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||    
T  12891769 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaa 12891706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 18653875 - 18653808
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaa 71  Q
    |||| ||||||||||||| ||||||||||  ||||||||||||||||||| | || ||| ||||||||    
T  18653875 aaaaacaaacgaaagaaatcagaaaatatacgaaatcacttattcaattaggatataagaaaaaacaa 18653808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 25962020 - 25961907
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaa-tatgt-gaaatcacttattcaattaaggtagaaggaaaaacaaa-tcggaagggtgatttttggatcaaaatt 100  Q
    |||| |||| |||||||||| ||||| ||||| ||||||||||||| ||||| | || |||||||||| || ||| | || ||||| | |||||||||||    
T  25962020 aaaaacaaaggaaagaaaactgaaaaatatgtagaaatcacttatttaattaggatataaggaaaaaccaactcgaatggatgattct-ggatcaaaatt 25961922  T
Q  101 gaccctaaatcaccc 115  Q
    |||||||||||||||    
T  25961921 gaccctaaatcaccc 25961907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 11734847 - 11734892
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaat 51  Q
    |||||||||| ||||||||  |||||||||||||||||||||||||||    
T  11734847 aaaagcaaactaaagaaaa--gaaaatatgtgaaatcacttattcaat 11734892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 119
Target Start/End: Original strand, 6887245 - 6887304
Alignment:
Q  60 aaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatcacccctct 119  Q
    |||||||||||| |  || |||||||||| || | |||||||||||||||||||||||||    
T  6887245 aaggaaaaacaagttagaggggtgattttgggttaaaaattgaccctaaatcacccctct 6887304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 2555378 - 2555419
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcactta 45  Q
    |||| |||||||||||||||| |||| |||||||||||||||    
T  2555378 aaaaacaaacgaaagaaaacaaaaaaaatgtgaaatcactta 2555419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 60 - 119
Target Start/End: Complemental strand, 31645876 - 31645817
Alignment:
Q  60 aaggaaaaacaaatcggaagggtgatttttggatcaaaa-ttgaccctaaatcacccctct 119  Q
    |||||||||||| |  || |||||||||| ||||||||| |||||||||||||||||||||    
T  31645876 aaggaaaaacaagttagaggggtgatttt-ggatcaaaaattgaccctaaatcacccctct 31645817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 109; Significance: 1e-54; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 27534792 - 27534660
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||    
T  27534792 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggagggatgatttttgggtcaaaattgac 27534693  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    ||||||||| |||||| ||||||||||||||||    
T  27534692 cctaaatcatccctctgacaagaagaagaagaa 27534660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 424319 - 424451
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||| ||||||||||||| |||||||||||    
T  424319 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggaggggtgatttttgggtcaaaattgac 424418  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    |||||||||||||||| ||||||||||||||||    
T  424419 cctaaatcacccctctgacaagaagaagaagaa 424451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 4 - 149
Target Start/End: Original strand, 13488564 - 13488711
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||| |||    
T  13488564 aaaaacaaacgaaagaaaatagaaaatatgtaaaatcacttattcaattaaggtggaaggaaaaacaaatcggatgggtgatttttgggtcaaaatcgac 13488663  T
Q  104 cctaaatcacccctct---aacaagaagaagaagaaagggggcgacggc 149  Q
    ||||||||| ||||||   ||||| ||||||||||||||||||||||||    
T  13488664 cctaaatca-ccctctgacaacaacaagaagaagaaagggggcgacggc 13488711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 4 - 140
Target Start/End: Complemental strand, 18343707 - 18343568
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| | ||||||||||||| ||||||||||     
T  18343707 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcactcatttaattaaggtagaaggaaaaacaaatcgaaggggtgatttttgggtcaaaattgat 18343608  T
Q  104 cctaaatcacccctct---aacaagaagaagaagaaaggg 140  Q
    ||||||||||||||||   ||||| |||||||||||||||    
T  18343607 cctaaatcacccctctgacaacaacaagaagaagaaaggg 18343568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 3232881 - 3232749
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||| ||||| ||||||||||| |||||||||||||    
T  3232881 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcatttattcaattaggatagaaggaaaaacaattcggaggggtgattttttgatcaaaattgac 3232782  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    |||||||||||| ||| | ||||||||||||||    
T  3232781 cctaaatcacccatctgaaaagaagaagaagaa 3232749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 28678158 - 28678290
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||| | |||||||||||||||||||||||||||| | ||||| ||||||||| ||||| | ||||||||||| |||||||||||    
T  28678158 aaaaacaaacgaaagaaaatataaaatatgtgaaatcacttattcaattatgatagaacgaaaaacaattcggacgagtgatttttgggtcaaaattgac 28678257  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    |||||||||||||||||| ||||||||||||||    
T  28678258 cctaaatcacccctctaaaaagaagaagaagaa 28678290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 7995600 - 7995721
Alignment:
Q  16 aagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatcaccc 115  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||  |||||||||||| |||||||||||||||||||||||    
T  7995600 aagaaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggagaggtgatttttgggtcaaaattgaccctaaatcaccc 7995699  T
Q  116 ctct-aacaagaagaagaagaa 136  Q
    |||| || ||||||||||||||    
T  7995700 ctctgaaaaagaagaagaagaa 7995721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 4 - 133
Target Start/End: Complemental strand, 32784201 - 32784072
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||| | | ||||||||||||||| ||||| ||||||||||||| |||||||||||    
T  32784201 aaaaacaaacaaaagaaaacagaaaatatgtgaaatcacttattcaataaggatagaaggaaaaacaattcggaggggtgatttttgggtcaaaattgac 32784102  T
Q  104 cctaaatcacccctctaacaagaagaagaa 133  Q
    |||||||||||||| | | |||||||||||    
T  32784101 cctaaatcacccctttgaaaagaagaagaa 32784072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 33487058 - 33487190
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||| || ||||||| ||||||||| |||||||||| | ||||||||||||||| ||||| ||||||||||||| |||||||||||    
T  33487058 aaaaacaaacgaaagaaagcataaaatatatgaaatcacatattcaattaggatagaaggaaaaacaattcggaggggtgatttttgggtcaaaattgac 33487157  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    |||||||||||||||| | ||||||||||||||    
T  33487158 cctaaatcacccctctgaaaagaagaagaagaa 33487190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 42490986 - 42490854
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||||| ||| ||||||||||||||||||||||||||| ||||| ||||||||| ||||| ||||||||||| | ||||| |||||    
T  42490986 aaaaacaaacgaaagaaaactgaagatatgtgaaatcacttattcaattaagatagaacgaaaaacaattcggaggggtgatttttaggtcaaacttgac 42490887  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    ||||||||||| |||| ||||||||||||||||    
T  42490886 cctaaatcacctctctgacaagaagaagaagaa 42490854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 20411666 - 20411533
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||    || || ||||||||| ||||| ||||||||||||| |||||||||||    
T  20411666 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaatttgaataaaaagaaaaacaattcggatgggtgatttttgggtcaaaattgac 20411567  T
Q  104 cctaaatcacccctctaacaagaagaagaagaaa 137  Q
    | |||||||||| ||||| |||||||||||||||    
T  20411566 cataaatcacccatctaaaaagaagaagaagaaa 20411533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 4882387 - 4882519
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| | || || ||||||||||||||| ||||||||||||| || ||||||||    
T  4882387 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatataatgaaaaacaaatcggaggggtgatttttgggtcgaaattgac 4882486  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
     ||||||| ||| ||| | ||||||||||||||    
T  4882487 tctaaatcgcccatctgaaaagaagaagaagaa 4882519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 4 - 132
Target Start/End: Complemental strand, 29205378 - 29205250
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||| |||||||||||||||||| |||||||||||||||||||| | ||||||||||||||| ||  | ||||||||||||| |||||||||||    
T  29205378 aaaaacaaacaaaagaaaacagaaaatatatgaaatcacttattcaattatgatagaaggaaaaacaattccaaggggtgatttttgggtcaaaattgac 29205279  T
Q  104 cctaaatcacccctctaacaagaagaaga 132  Q
    |||||||||||| ||||| ||||||||||    
T  29205278 cctaaatcacccgtctaaaaagaagaaga 29205250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 4 - 133
Target Start/End: Complemental strand, 12871714 - 12871585
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||||| |||||||||||||||||||||||| |||| | || || ||||||||| ||||| ||||||||||||| |||||||||||    
T  12871714 aaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttattcgattaggatataatgaaaaacaactcggaggggtgatttttgggtcaaaattgac 12871615  T
Q  104 cctaaatcacccctctaacaagaagaagaa 133  Q
    |||||||||||||||| ||| |||| ||||    
T  12871614 cctaaatcacccctctgacacgaaggagaa 12871585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 14265365 - 14265251
Alignment:
Q  16 aagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatcaccc 115  Q
    |||||||||||||||||||||||||||||||| ||||| | ||||||||||||||  ||||| |||||||||||   |||||||||||||||||||||||    
T  14265365 aagaaaacagaaaatatgtgaaatcacttatttaattaggatagaaggaaaaacagctcggaggggtgatttttttgtcaaaattgaccctaaatcaccc 14265266  T
Q  116 ctctaacaagaagaa 130  Q
     ||| ||||||||||    
T  14265265 atctgacaagaagaa 14265251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 14 - 136
Target Start/End: Complemental strand, 17347681 - 17347560
Alignment:
Q  14 gaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatcac 113  Q
    |||||||||||||||| ||||||||||||||||||  ||| | |||||| |||||||| ||||| ||||||||||||| ||||||||||||||||||||     
T  17347681 gaaagaaaacagaaaagatgtgaaatcacttattcctttatgatagaagaaaaaacaactcggatgggtgatttttgg-tcaaaattgaccctaaatcat 17347583  T
Q  114 ccctctaacaagaagaagaagaa 136  Q
    || ||| ||||||||||||||||    
T  17347582 ccatctgacaagaagaagaagaa 17347560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 45193654 - 45193786
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaagg-aaaaacaaatcggaagggtgatttttggatcaaaattga 102  Q
    |||| |||||||||| |||| ||||||||||||||||||||||||||||| | ||||||| |||||||| ||||| |||| ||| |||| | ||||||||    
T  45193654 aaaaacaaacgaaaggaaacggaaaatatgtgaaatcacttattcaattaggatagaaggaaaaaacaactcggaggggt-attattgggttaaaattga 45193752  T
Q  103 ccctaaatcacccctctaacaagaagaagaagaa 136  Q
    ||||||||| ||||||| ||||||||||||||||    
T  45193753 ccctaaatcgcccctctgacaagaagaagaagaa 45193786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 45750571 - 45750439
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||||  |||||||||||||| ||||||||||||| | || |||||||||  |||||||  | |||||||||| |||||||||||    
T  45750571 aaaaacaaacgaaagaaaaccaaaaatatgtgaaataacttattcaattaggataaaaggaaaaaacaatcggattgatgatttttgggtcaaaattgac 45750472  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    | |||||||||||||| | ||||||||||||||    
T  45750471 cttaaatcacccctctgaaaagaagaagaagaa 45750439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 37822373 - 37822471
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattga 102  Q
    |||| |||| ||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||| || ||||||| |||||||| ||||||||||    
T  37822373 aaaaacaaatgaaagaaaatagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcagaagggtaatttttgggtcaaaattga 37822471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 9 - 133
Target Start/End: Complemental strand, 42276444 - 42276321
Alignment:
Q  9 caaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaa 108  Q
    ||||||||||||||| ||||||||||||||||| ||||| ||||| | |||||| |||||||| ||||| |||||| |||||  |||||| | |||||||    
T  42276444 caaacgaaagaaaactgaaaatatgtgaaatcagttatttaattatgatagaagaaaaaacaattcggaggggtga-ttttgtgtcaaaaataaccctaa 42276346  T
Q  109 atcacccctctaacaagaagaagaa 133  Q
    ||||||||||| | |||||||||||    
T  42276345 atcacccctctgaaaagaagaagaa 42276321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 44517240 - 44517157
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgattt 87  Q
    |||| ||||||||||||| ||||||||||||||||||||||||| ||||| | ||||||||||||||| |||||||||||||||    
T  44517240 aaaaacaaacgaaagaaagcagaaaatatgtgaaatcacttattgaattaggatagaaggaaaaacaattcggaagggtgattt 44517157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 4871054 - 4871186
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||| || |||| |||||||||||||||| |||||||||||||   || |||||||||||| |||||  |||||||| ||  ||||||||||     
T  4871054 aaaaacaaacggaaaaaaatagaaaatatgtgaaataacttattcaattagaataaaaggaaaaacaattcggagtggtgatttatgagtcaaaattgat 4871153  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    | |||||||||| || || ||||||||||||||    
T  4871154 cttaaatcacccgtcaaaaaagaagaagaagaa 4871186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 10627093 - 10627008
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgattttt 89  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||| | || || ||||||||| ||||| || ||||||||    
T  10627093 aaaaacaaacgaaagaaaacagaaaatatgtgaaattacttattcaattaggatataaagaaaaacaactcggagggatgattttt 10627008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 57 - 141
Target Start/End: Original strand, 33939083 - 33939167
Alignment:
Q  57 tagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatcacccctctaacaagaagaagaagaaagggg 141  Q
    ||||| ||||||||| || || ||||||||||||| ||||||||||||||||||||||||||||| |||||| | || |||||||    
T  33939083 tagaaagaaaaacaattcagaggggtgatttttgggtcaaaattgaccctaaatcacccctctaaaaagaaggaaaaaaaagggg 33939167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 42 - 133
Target Start/End: Original strand, 15791554 - 15791645
Alignment:
Q  42 cttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatcacccctctaacaagaagaagaa 133  Q
    |||||||||||||| || |||||||||||| ||||| | ||||||||||  |||||||||| ||||||||| |||||  |||||||||||||    
T  15791554 cttattcaattaagatataaggaaaaacaactcggatgagtgatttttgtgtcaaaattgatcctaaatcagccctccgacaagaagaagaa 15791645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 51418106 - 51418040
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaa 71  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||    
T  51418106 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcactt-ttcaattaggatagaaggaaaaacaa 51418040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 29726624 - 29726690
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaaca 70  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||| | || |||||||||||    
T  29726624 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcgattaggatataaggaaaaaca 29726690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 32878799 - 32878690
Alignment:
Q  3 aaaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattga 102  Q
    ||||| ||||||||||||||  |||| ||||||||| |||||||| ||||| | |||| |||||||||| |||||||| ||||||| || |||||||| |    
T  32878799 aaaaaacaaacgaaagaaaattgaaa-tatgtgaaa-cacttatttaattaggatagagggaaaaacaactcggaaggatgattttggg-tcaaaattaa 32878703  T
Q  103 ccctaaatcaccc 115  Q
    |||||||||||||    
T  32878702 ccctaaatcaccc 32878690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 15391280 - 15391330
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaa 54  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  15391280 aaaaacaaacgaaagaaaacagaaaacatgtgaaatcacttattcaattaa 15391330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 9298442 - 9298552
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtg-aaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattga 102  Q
    |||| |||||||||||||||  |||||| ||| |||||| ||||| || || | ||||||||||||||| ||||| |||||| ||| || ||||||||||    
T  9298442 aaaaacaaacgaaagaaaacttaaaatacgtggaaatcaattatttaactaggatagaaggaaaaacaactcgga-gggtgacttt-ggttcaaaattga 9298539  T
Q  103 ccctaaatcaccc 115  Q
    |||||||||||||    
T  9298540 ccctaaatcaccc 9298552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 95 - 136
Target Start/End: Complemental strand, 5832245 - 5832204
Alignment:
Q  95 aaaattgaccctaaatcacccctctaacaagaagaagaagaa 136  Q
    ||||||||||||||||||||||||| |||| |||||||||||    
T  5832245 aaaattgaccctaaatcacccctcttacaaaaagaagaagaa 5832204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 13869675 - 13869627
Alignment:
Q  65 aaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatcacc 114  Q
    |||| |||||||| ||||||||||||| ||||||||||||||||||||||    
T  13869675 aaaaaaaatcggatgggtgatttttgg-tcaaaattgaccctaaatcacc 13869627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 15791303 - 15791344
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcactta 45  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  15791303 aaaaacaaacgaaagaaaacagaaaatatgttaaatcactta 15791344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 33125865 - 33125943
Alignment:
Q  35 gaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatcacc 114  Q
    |||||||||||||||||||    |||||||||||||| |  || | |||||||| || ||||||||||||||||||||||    
T  33125865 gaaatcacttattcaattataaaagaaggaaaaacaatttagatgagtgattttggg-tcaaaattgaccctaaatcacc 33125943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 136
Target Start/End: Complemental strand, 47551161 - 47551106
Alignment:
Q  81 gtgatttttggatcaaaattgaccctaaatcacccctctaacaagaagaagaagaa 136  Q
    ||||||||| | ||||||||| | ||||||||||||||| |||| |||||||||||    
T  47551161 gtgatttttaggtcaaaattggctctaaatcacccctctgacaaaaagaagaagaa 47551106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 28399349 - 28399414
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtg-aaatcacttattcaattaaggtagaaggaaaaa 68  Q
    |||| |||||||||||||||  |||||||||| |||||||||||| ||||| | || |||||||||    
T  28399349 aaaaacaaacgaaagaaaactaaaaatatgtgaaaatcacttatttaattatgatataaggaaaaa 28399414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 136
Target Start/End: Original strand, 29726692 - 29726732
Alignment:
Q  95 aaaattgaccctaaatcacccctctaacaagaagaagaagaa 136  Q
    |||||||||| |||||||||||||| ||||||||||||||||    
T  29726692 aaaattgacc-taaatcacccctctgacaagaagaagaagaa 29726732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 107; Significance: 2e-53; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 25067947 - 25067803
Alignment:
Q  1 acaaaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaatt 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||| ||||||||    
T  25067947 acaaaaag-aaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaaatagaaggaaaaacaaatcggaggggtgatttttgggtcaaaatt 25067849  T
Q  101 gaccctaaatcacccctctaacaagaagaagaagaaagggggcgacggc 149  Q
    |||||||||||||| ||||||||||||||   |||||||||||||||||    
T  25067848 gaccctaaatcacctctctaacaagaaga---agaaagggggcgacggc 25067803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 4 - 140
Target Start/End: Original strand, 43474156 - 43474292
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||| ||||| ||||||||||||| |||||||||||    
T  43474156 aaaaacaaacgaaagaaaacagaaaatttgtgaaatcacttattcaattaggatagaaggaaaaacaattcggatgggtgatttttgggtcaaaattgac 43474255  T
Q  104 cctaaatcacccctctaacaagaagaagaagaaaggg 140  Q
    |||||||||||||||||| ||||||||||||||||||    
T  43474256 cctaaatcacccctctaaaaagaagaagaagaaaggg 43474292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 12704780 - 12704647
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||| ||| | ||||||||||||| |||||||||||    
T  12704780 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatataaggaaaaacaattcgaaggggtgatttttgggtcaaaattgac 12704681  T
Q  104 cctaaatcacccctctaacaagaagaagaagaaa 137  Q
    |||||||||||||||||| |||||||||||||||    
T  12704680 cctaaatcacccctctaaaaagaagaagaagaaa 12704647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 4 - 141
Target Start/End: Original strand, 31908844 - 31908981
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| || | || ||| |||||||| |||||||||||||||||||||||||||||||    
T  31908844 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaactaggataaaagaaaaaacaattcggaagggtgatttttggatcaaaattgac 31908943  T
Q  104 cctaaatcacccctctaacaagaagaagaagaaagggg 141  Q
     |||||||| |||||||| ||||||||||| |||||||    
T  31908944 tctaaatcatccctctaaaaagaagaagaataaagggg 31908981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 27095798 - 27095666
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||| ||||| ||||||||||| | |||||||||||    
T  27095798 aaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggaggggtgatttttaggtcaaaattgac 27095699  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    |||||||||||| ||| ||||||||| ||||||    
T  27095698 cctaaatcacccatctgacaagaagacgaagaa 27095666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 11 - 136
Target Start/End: Original strand, 11937893 - 11938019
Alignment:
Q  11 aacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaa-ggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaa 109  Q
    |||||||||||||| |||||||||||||||||||||||||||| | ||||| |||||||||| ||||| ||||||||||||| |||||||||||||||||    
T  11937893 aacgaaagaaaacaaaaaatatgtgaaatcacttattcaattaggatagaaaggaaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaa 11937992  T
Q  110 tcacccctctaacaagaagaagaagaa 136  Q
    |||||||||| | ||||||||||||||    
T  11937993 tcacccctctgaaaagaagaagaagaa 11938019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 5754381 - 5754248
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||| ||||||||||| |||||||||||||||| |||||||| || | ||||||||||||||| ||||| || |||||||||| |||||||||||    
T  5754381 aaaaacaaatgaaagaaaacaaaaaatatgtgaaatcatttattcaactaggatagaaggaaaaacaattcggagggatgatttttgggtcaaaattgac 5754282  T
Q  104 cctaaatcacccctctaacaagaagaagaagaaa 137  Q
    |||||||||||||||||| |||||||||||||||    
T  5754281 cctaaatcacccctctaaaaagaagaagaagaaa 5754248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 22597228 - 22597096
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||||| |||||||||||||||||||||| ||||| | ||||||||||||||| ||||| || |||||||||| |||||||||||    
T  22597228 aaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttatttaattaggatagaaggaaaaacaactcggagggatgatttttgggtcaaaattgac 22597129  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    | |||||||||||||| ||||||| ||||||||    
T  22597128 cttaaatcacccctctgacaagaaaaagaagaa 22597096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 38535333 - 38535465
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| || ||  | ||||| ||||||| |||||||||||    
T  38535333 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaaggaaaaaaaattcaaaggggtgctttttgggtcaaaattgac 38535432  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    |||||||||||||||| | ||||||||||||||    
T  38535433 cctaaatcacccctctgaaaagaagaagaagaa 38535465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 44942378 - 44942244
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||| |||||||||| |||||||||||||||||||||||||||| | |||||| |||||||| ||||| ||||||||||||| |||||||||||    
T  44942378 aaaaacaaacaaaagaaaacataaaatatgtgaaatcacttattcaattaggatagaagaaaaaacaactcggaggggtgatttttgggtcaaaattgac 44942279  T
Q  104 cctaaatcacccctctaacaagaagaagaagaaag 138  Q
    | |||||||||| ||| | ||||||||||||||||    
T  44942278 cataaatcacccatctgaaaagaagaagaagaaag 44942244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 7072976 - 7073109
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||||||||||| |||||| | ||||||||||||| | ||||||||||| ||| ||| ||||| ||||||||| |||||||||||    
T  7072976 aaaaacaaacgaaagaaaacagaaaatttgtgaagttacttattcaattaggatagaaggaaaaccaattcgaaagggcgatttttgggtcaaaattgac 7073075  T
Q  104 cctaaatcacccctctaacaagaagaagaagaaa 137  Q
    |||||||||||||||| | |||||||||||||||    
T  7073076 cctaaatcacccctctgaaaagaagaagaagaaa 7073109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 4 - 141
Target Start/End: Original strand, 9978697 - 9978834
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||| | | | ||||||||||||| |||||||||||    
T  9978697 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcatttattcaattaagataaaaggaaaaacaatttgaaggggtgatttttgggtcaaaattgac 9978796  T
Q  104 cctaaatcacccctctaacaagaagaagaagaaagggg 141  Q
    | ||||||||||||||   |||||||| ||||||||||    
T  9978797 cttaaatcacccctctggaaagaagaaaaagaaagggg 9978834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 33012170 - 33012038
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||| ||||| |||||||||||||||||||||||||||||   ||||||||||||||| ||||| | ||||||||||| |||||||||||    
T  33012170 aaaaacaaacgaaacaaaactgaaaatatgtgaaatcacttattcaattagaatagaaggaaaaacaattcggatgagtgatttttgggtcaaaattgac 33012071  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    |||||||||||| ||| | ||||||||||||||    
T  33012070 cctaaatcacccgtctgaaaagaagaagaagaa 33012038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 18089426 - 18089537
Alignment:
Q  10 aaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaa 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||| | || ||| |||||||| ||||| | |||||||||||||||||||||||||||||    
T  18089426 aaactaaagaaaacagaaaatatgtgaaatcacttattcaattaggatataagaaaaaacaattcggaggagtgatttttggatcaaaattgaccctaaa 18089525  T
Q  110 tcacccctctaa 121  Q
    ||||||||||||    
T  18089526 tcacccctctaa 18089537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 20561160 - 20561275
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||||||||||||||||||| ||||||||| |||  | ||||||||||||||| ||||| ||||||||||||| |||||||||||    
T  20561160 aaaaacaaacgaaagaaaacagaaaatatgtgaaaccacttattcgatttggatagaaggaaaaacaattcggaggggtgatttttgggtcaaaattgac 20561259  T
Q  104 cctaaatcacccctct 119  Q
    ||||||||||||||||    
T  20561260 cctaaatcacccctct 20561275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 9690001 - 9690133
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||| |||||| ||||||||||| |||||||||||||||| | ||||||||||||||  ||||| ||||||||||||| ||||| |||||    
T  9690001 aaaaacaaacgaaaaaaaacaaaaaatatgtgagatcacttattcaattaggatagaaggaaaaacagttcggaggggtgatttttgggtcaaatttgac 9690100  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    | |||||||||||||| | ||||||||||||||    
T  9690101 cttaaatcacccctctgaaaagaagaagaagaa 9690133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 15919966 - 15919835
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||   ||||||||||||||||| ||||||||||| | ||||||||||||||| ||||| ||||||||||||| |||||||||||    
T  15919966 aaaaacaaacgaaagaaatt-gaaaatatgtgaaatcatttattcaattaggatagaaggaaaaacaactcggaggggtgatttttgggtcaaaattgac 15919868  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
     ||||||||||||||||| |||||| |||||||    
T  15919867 tctaaatcacccctctaataagaaggagaagaa 15919835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 32015317 - 32015181
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattca----attaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaat 99  Q
    |||| |||| ||| |||||||||||||||||||||||||||||| |    |||| | || |||||||||||| ||||| ||||||||||||| |||||||    
T  32015317 aaaaacaaatgaatgaaaacagaaaatatgtgaaatcacttatttattgaattatgatataaggaaaaacaactcggaggggtgatttttgggtcaaaat 32015218  T
Q  100 tgaccctaaatcacccctctaacaagaagaagaagaa 136  Q
    ||||||||||||||||||||||||| |||||||||||    
T  32015217 tgaccctaaatcacccctctaacaaaaagaagaagaa 32015181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 15 - 136
Target Start/End: Original strand, 34963105 - 34963225
Alignment:
Q  15 aaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatcacc 114  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||| | ||||||||||||| |||| |||    
T  34963105 aaagaaaacagaaaaaatgtgaaatcacttattcaattagggtagaaggaaaaacaaatcag-agggtgatttttaggtcaaaattgacccaaaattacc 34963203  T
Q  115 cctctaacaagaagaagaagaa 136  Q
    ||||| |||| |||| ||||||    
T  34963204 cctctgacaacaagaggaagaa 34963225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 4 - 135
Target Start/End: Complemental strand, 36868101 - 36867970
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||  ||||||||||||||||| |||||| |||||   ||||||||||||||| || || ||||||||||||  |||||||||||    
T  36868101 aaaaacaaacgaaagaaagtagaaaatatgtgaaatcgcttattgaattagaatagaaggaaaaacaattcagaggggtgatttttgagtcaaaattgac 36868002  T
Q  104 cctaaatcacccctctaacaagaagaagaaga 135  Q
    |||||||||||||||||  |||||||||||||    
T  36868001 cctaaatcacccctctagaaagaagaagaaga 36867970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 4 - 141
Target Start/End: Original strand, 4604335 - 4604472
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||| ||||||||| |||||||||||||||||||||||||||||||   ||||||||||||||| ||| | | || |||||||| |||||||||||    
T  4604335 aaaaacaatcgaaagaaagcagaaaatatgtgaaatcacttattcaattagaatagaaggaaaaacaactcgaatgagtaatttttgggtcaaaattgac 4604434  T
Q  104 cctaaatcacccctctaacaagaagaagaagaaagggg 141  Q
    | |||||||||| ||| | || ||||||||||||||||    
T  4604435 cttaaatcacccttctgataaaaagaagaagaaagggg 4604472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 10 - 136
Target Start/End: Original strand, 13879040 - 13879174
Alignment:
Q  10 aaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaa--------aaacaaatcggaagggtgatttttggatcaaaattg 101  Q
    ||||||||| |||||||||||||||||||||||||||||||||| | |||||||||        |||||| ||||| |||||||| |||| |||||||||    
T  13879040 aaacgaaaggaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaagaaaaaaaaaacaactcggaggggtgattattgggtcaaaattg 13879139  T
Q  102 accctaaatcacccctctaacaagaagaagaagaa 136  Q
    ||||||||||| |||||| ||||||||||||||||    
T  13879140 accctaaatcatccctctgacaagaagaagaagaa 13879174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 10 - 136
Target Start/End: Original strand, 14019165 - 14019299
Alignment:
Q  10 aaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaa--------aaacaaatcggaagggtgatttttggatcaaaattg 101  Q
    ||||||||| |||||||||||||||||||||||||||||||||| | |||||||||        |||||| ||||| |||||||| |||| |||||||||    
T  14019165 aaacgaaaggaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaagaaaaaaaaaacaactcggaggggtgattattgggtcaaaattg 14019264  T
Q  102 accctaaatcacccctctaacaagaagaagaagaa 136  Q
    ||||||||||| |||||| ||||||||||||||||    
T  14019265 accctaaatcatccctctgacaagaagaagaagaa 14019299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 17268167 - 17268272
Alignment:
Q  19 aaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatcacccctc 118  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||| | || |||||||||| |||||||||||| |||||||||||||    
T  17268167 aaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcgaagggatgatttttgggtcaaaattgaccataaatcacccctc 17268266  T
Q  119 taacaa 124  Q
    | ||||    
T  17268267 tgacaa 17268272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 28261916 - 28262052
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaa-----ggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaa 98  Q
    |||| |||||||||||||||||||||||||| ||||||| |||||||||||     | ||||||||||||||| ||||| | ||||||||||| ||||||    
T  28261916 aaaaacaaacgaaagaaaacagaaaatatgtaaaatcacatattcaattaaattatgatagaaggaaaaacaattcggatgagtgatttttgggtcaaaa 28262015  T
Q  99 ttgaccctaaatcacccctctaacaagaagaagaagaa 136  Q
    ||||||||||||||||| ||| | ||||||||||||||    
T  28262016 ttgaccctaaatcacccatctga-aagaagaagaagaa 28262052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 15 - 124
Target Start/End: Original strand, 38384481 - 38384590
Alignment:
Q  15 aaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatcacc 114  Q
    |||| ||||| |||| ||||||||||||||||||||||| |||| ||||||||||||||||||   ||||||||||| ||||||||||||| ||||||||    
T  38384481 aaaggaaacaaaaaaaatgtgaaatcacttattcaattagggtataaggaaaaacaaatcggagatgtgatttttgggtcaaaattgacccaaaatcacc 38384580  T
Q  115 cctctaacaa 124  Q
    ||||||||||    
T  38384581 cctctaacaa 38384590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 34471059 - 34470925
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagg--gtgatttttggatcaaaattg 101  Q
    |||| |||||||||||||| |||||||||||||||||||| ||||||||||| ||||| || |||||| ||||| ||  ||||||||||| |||||||||    
T  34471059 aaaaacaaacgaaagaaaatagaaaatatgtgaaatcactgattcaattaagatagaaagataaacaattcggaggggtgtgatttttgggtcaaaattg 34470960  T
Q  102 accctaaatcacccctctaacaagaagaagaagaaa 137  Q
    |||||||| | ||||||||| |||||||| ||||||    
T  34470959 accctaaa-cccccctctaaaaagaagaaaaagaaa 34470925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 4 - 118
Target Start/End: Original strand, 13740688 - 13740801
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||| |||||  |||||||||||| |||||| ||||    
T  13740688 aaaaacaaacgaaagaaaacagaaaatatatgaaatcacttattcaattaggatagaaggaaaaacaattcggagtggtgatttttgggtcaaaa-tgac 13740786  T
Q  104 cctaaatcacccctc 118  Q
    | ||||||| |||||    
T  13740787 cataaatcatccctc 13740801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 10 - 112
Target Start/End: Complemental strand, 35333592 - 35333490
Alignment:
Q  10 aaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||| ||  | ||||||||||||| |||||||||| ||||||    
T  35333592 aaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagcaggaaaaacaattcttaggggtgatttttgggtcaaaattgatcctaaa 35333493  T
Q  110 tca 112  Q
    |||    
T  35333492 tca 35333490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 4426685 - 4426782
Alignment:
Q  3 aaaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaatt 100  Q
    ||||| |||| |||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||| |  |||||||| ||||||||||    
T  4426685 aaaaaacaaatgaaagaaaacagaaaatatgtgaaatcatttattcaattaggatagaaggaaaaacaaatcggatgactgatttttagatcaaaatt 4426782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 28231125 - 28231257
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||| ||||| |||||| ||| || ||||  || ||    
T  28231125 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaaccaagatagaaggaaaaacaattcggatgggtga-tttagggtcaattttaac 28231223  T
Q  104 cc-taaatcacccctctaacaagaagaagaagaa 136  Q
    ||  ||||||||||||| | ||||||||||||||    
T  28231224 ccaaaaatcacccctctgaaaagaagaagaagaa 28231257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 4 - 133
Target Start/End: Original strand, 34416789 - 34416918
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||| ||| ||||| ||||||||||||||||||||||||||||| | || |||||||||||| ||||| || |||||||| | |||||||||||    
T  34416789 aaaaacaaacaaaaaaaaactgaaaatatgtgaaatcacttattcaattaggatataaggaaaaacaattcggagggatgattttttggtcaaaattgac 34416888  T
Q  104 cctaaatcacccctctaacaagaagaagaa 133  Q
    | || |||| |||||| | |||||||||||    
T  34416889 cttagatcatccctctgaaaagaagaagaa 34416918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 4739422 - 4739292
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||| || ||||||||||||||||||||| ||||||| ||||| | | ||||||||||||| ||||| |||||||||| || ||  |||||||    
T  4739422 aaaaacaaacggaaaaaaacagaaaatatgtgaaattacttatttaattaggatggaaggaaaaacaactcggaggggtgattttggggtc--aattgac 4739325  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    |||||||||||||||  |||| || ||||||||    
T  4739324 cctaaatcacccctccgacaaaaaaaagaagaa 4739292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 10287034 - 10287135
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| | || || ||||  ||| ||||| |||||||||||   |||||||||||    
T  10287034 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggata-aaagaaatgcaattcggaggggtgatttttatgtcaaaattgac 10287132  T
Q  104 cct 106  Q
    |||    
T  10287133 cct 10287135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 32314535 - 32314461
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaa 78  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||| | |||||| |||||||| ||||||    
T  32314535 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcatttattcaattaggatagaagaaaaaacaattcggaa 32314461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 4732163 - 4732059
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||| |||||| ||| |||||||||||||||||||||||| | ||||||||||  ||| |   ||||||||||||||  |||||||||||    
T  4732163 aaaaacaaacgaaa-aaaacaaaaagtatgtgaaatcacttattcaattaggatagaaggaaatgcaactaacaagggtgatttttgagtcaaaattgac 4732065  T
Q  104 cctaaa 109  Q
    ||||||    
T  4732064 cctaaa 4732059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 79 - 136
Target Start/End: Original strand, 12891192 - 12891249
Alignment:
Q  79 gggtgatttttggatcaaaattgaccctaaatcacccctctaacaagaagaagaagaa 136  Q
    ||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||    
T  12891192 gggtgatttttgggtcaaaattgaccctaaatcacccctctgaaaagaagaagaagaa 12891249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 17767579 - 17767690
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtg-aaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattga 102  Q
    |||| |||| |||||||||| ||||||||||| |||||||||||| ||||| | || |||||||||||| ||| | |||||| || ||| ||||||||||    
T  17767579 aaaatcaaatgaaagaaaactgaaaatatgtggaaatcacttatttaattaggatataaggaaaaacaactcgaaggggtga-ttctgggtcaaaattga 17767677  T
Q  103 ccctaaatcaccc 115  Q
    | |||||||||||    
T  17767678 ctctaaatcaccc 17767690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 64 - 127
Target Start/End: Complemental strand, 41797648 - 41797585
Alignment:
Q  64 aaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatcacccctctaacaagaa 127  Q
    |||||||| || || ||||||||||| | |||||||| |||||||||||||||||| |||||||    
T  41797648 aaaaacaactctgaggggtgatttttaggtcaaaattaaccctaaatcacccctctgacaagaa 41797585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 12891147 - 12891187
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcactt 44  Q
    |||| |||||||||||||| |||||||||||||||||||||    
T  12891147 aaaaacaaacgaaagaaaatagaaaatatgtgaaatcactt 12891187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 11798544 - 11798653
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtg-aaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattga 102  Q
    |||| ||||| |||||||||  |||||||||| |||| ||||||| ||||| | || |||||||| |||   ||| |||||||||| || ||||||||||    
T  11798544 aaaaacaaacaaaagaaaactaaaaatatgtggaaattacttatttaattaggatataaggaaaagcaacatggaggggtgattttggg-tcaaaattga 11798642  T
Q  103 ccctaaatcac 113  Q
    || ||||||||    
T  11798643 ccataaatcac 11798653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 20607340 - 20607414
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtg-aaatcacttattcaattaaggtagaaggaaaaacaaatcgga 77  Q
    |||| ||||||||||||||| ||||||||||| |||||||||| | || |||   |||| |||||||||||||||    
T  20607340 aaaaacaaacgaaagaaaactgaaaatatgtgaaaatcacttagttaactaaaaaagaaagaaaaacaaatcgga 20607414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 6431415 - 6431483
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgt-gaaatcacttattcaattaaggtagaaggaaaaacaa 71  Q
    |||| ||||| ||||||||| |||||||||| ||||||||||||| |||||   || ||||||||||||    
T  6431415 aaaaacaaacaaaagaaaactgaaaatatgtggaaatcacttatttaattagaatataaggaaaaacaa 6431483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 115
Target Start/End: Complemental strand, 28231236 - 28231200
Alignment:
Q  79 gggtgatttttggatcaaaattgaccctaaatcaccc 115  Q
    ||||||||||||| | |||||||||||||||||||||    
T  28231236 gggtgatttttgggttaaaattgaccctaaatcaccc 28231200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 133
Target Start/End: Original strand, 34416993 - 34417033
Alignment:
Q  93 tcaaaattgaccctaaatcacccctctaacaagaagaagaa 133  Q
    |||||||||||| |||||||||||||||| |||||| ||||    
T  34416993 tcaaaattgaccttaaatcacccctctaaaaagaagtagaa 34417033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 6230 - 6098
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||| ||||||||||||| |||||||||||    
T  6230 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggaggggtgatttttgggtcaaaattgac 6131  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    |||||||||||||||| ||||||||||||||||    
T  6130 cctaaatcacccctctgacaagaagaagaagaa 6098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 8e-50; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 41361825 - 41361693
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  41361825 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattacggtagaaggaaaaacaaatcggaggggtgatttttgggtcaaaattgac 41361726  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    | ||||||||||||   ||||||||||||||||    
T  41361725 cataaatcaccccttcgacaagaagaagaagaa 41361693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 9501683 - 9501549
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaagga-aaaacaaatcggaagggtgatttttggatcaaaattga 102  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||| || || ||||||||||||||||||||||||    
T  9501683 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaaacaattcagatgggtgatttttggatcaaaattga 9501584  T
Q  103 ccctaaatcacccctctaacaagaagaagaagaaa 137  Q
    |||||||||||| || ||| |||||||||||||||    
T  9501583 ccctaaatcaccactttaaaaagaagaagaagaaa 9501549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 14600734 - 14600866
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||| | |||||| |||||||| ||||| || |||||||||| |||||||||||    
T  14600734 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcagttattcaattaggatagaagaaaaaacaactcggatggatgatttttgggtcaaaattgac 14600833  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    ||||||||||| |||||||||||| ||||||||    
T  14600834 cctaaatcacctctctaacaagaaaaagaagaa 14600866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 10 - 141
Target Start/End: Original strand, 2025251 - 2025382
Alignment:
Q  10 aaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaa 109  Q
    |||||||| ||||||||||| |||||||||||||||||||||||   || |||||||||||| | ||||||||||||||| | |||||||||||| ||||    
T  2025251 aaacgaaataaaacagaaaacatgtgaaatcacttattcaattagaataaaaggaaaaacaacttggaagggtgattttttggtcaaaattgaccataaa 2025350  T
Q  110 tcacccctctaacaagaagaagaagaaagggg 141  Q
    ||||||||||||||||||||||||||||||||    
T  2025351 tcacccctctaacaagaagaagaagaaagggg 2025382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 4 - 127
Target Start/End: Original strand, 30026916 - 30027039
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||| ||||| ||||||||||||| |||||| ||||    
T  30026916 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaagaaaaaacaactcggatgggtgatttttgggtcaaaaatgac 30027015  T
Q  104 cctaaatcacccctctaacaagaa 127  Q
    |||||||||||||||| |||||||    
T  30027016 cctaaatcacccctctgacaagaa 30027039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 10148040 - 10147907
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaa-caaatcggaagggtgatttttggatcaaaattga 102  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||| | |||||| ||||| ||| ||||| |||||||| |||| ||||||||||    
T  10148040 aaaaacaaacgaaaggaaacagaaaatatgtgaaatcacttattcaattaggatagaagaaaaaaacaactcggaggggtgattattgggtcaaaattga 10147941  T
Q  103 ccctaaatcacccctctaacaagaagaagaagaa 136  Q
    ||||||||||||||||||||| ||||||||||||    
T  10147940 ccctaaatcacccctctaacatgaagaagaagaa 10147907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 24791204 - 24791337
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||||||||||||||| |||||||||||| ||||| | || |||||||||||| ||||| || |||||||||| |||||||||||    
T  24791204 aaaaacaaacgaaagaaaacagaaaatatgttaaatcacttattgaattaggatataaggaaaaacaattcggatggatgatttttgggtcaaaattgac 24791303  T
Q  104 cctaaatcacccctctaacaagaagaagaagaaa 137  Q
    | |||||||||||||||| |||||||||||||||    
T  24791304 cataaatcacccctctaaaaagaagaagaagaaa 24791337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 4 - 133
Target Start/End: Complemental strand, 37612746 - 37612617
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||| | ||||||||||||||||||||||||| || | |||||||||||| || ||||| ||||||||||||| |||||||||||    
T  37612746 aaaaacaaacgaaagaaaataaaaaatatgtgaaatcacttattcaactaggatagaaggaaaaaaaattcggaggggtgatttttgggtcaaaattgac 37612647  T
Q  104 cctaaatcacccctctaacaagaagaagaa 133  Q
    |||||||||||||||||| |||||||||||    
T  37612646 cctaaatcacccctctaaaaagaagaagaa 37612617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 39067725 - 39067857
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||| | ||||  ||||||||||| |||||||||||    
T  39067725 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattaaattaggatagaaggaaaaacaatttggaacagtgatttttgggtcaaaattgac 39067824  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    | |||||||||||||| | ||||||||||||||    
T  39067825 cttaaatcacccctcttaaaagaagaagaagaa 39067857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 31308241 - 31308103
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcgga-----ag-ggtgatttttggatcaaa 97  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||| |||||     || |||||||||| |||||||    
T  31308241 aaaaacaaacgaaagaaaacataaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggagtcggagaggtgatttttagatcaaa 31308142  T
Q  98 attgaccctaaatcacccctctaacaagaagaagaagaa 136  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  31308141 attgaccttaaatcacccctctaacaagaagaagaagaa 31308103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 4 - 133
Target Start/End: Original strand, 1810256 - 1810384
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||| ||||||| ||||||||||||||||| ||||| | |||||| ||||| |||||||| ||||||||||||| |||||||||||    
T  1810256 aaaaacaaacgaaagaaatcagaaaaaatgtgaaatcacttattgaattaggatagaagaaaaaa-aaatcggaggggtgatttttgggtcaaaattgac 1810354  T
Q  104 cctaaatcacccctctaacaagaagaagaa 133  Q
    |||||||||||||||||| |||||||||||    
T  1810355 cctaaatcacccctctaaaaagaagaagaa 1810384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 12329722 - 12329593
Alignment:
Q  1 acaaaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaatt 100  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||| ||| || |||||||||||||||||||||    
T  12329722 acaaaaacaaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaattcgaaatggtgatttttggatcaaaatt 12329623  T
Q  101 gaccctaaatcacccctctaacaagaagaa 130  Q
    ||| ||||||||||| ||| | ||||||||    
T  12329622 gactctaaatcacccatctgaaaagaagaa 12329593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 2234506 - 2234638
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||| || | ||||||||||||||| ||| | |||||||||||||||||||||| ||    
T  2234506 aaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaactaggatagaaggaaaaacaattcgaaggggtgatttttggatcaaaattaac 2234605  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    |||| ||||||| | ||| ||||||||||||||    
T  2234606 cctagatcacccttttaaaaagaagaagaagaa 2234638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 31407784 - 31407916
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||||| |||||||||||||||| |||||||| || | ||||||||||||||| |||||  | |||||||||| |||||||||||    
T  31407784 aaaaacaaacgaaagaaaacaaaaaatatgtgaaatcatttattcaactatgatagaaggaaaaacaattcggagagatgatttttgggtcaaaattgac 31407883  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    |||||||||||||||||| || |||||||||||    
T  31407884 cctaaatcacccctctaaaaataagaagaagaa 31407916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 11161975 - 11161843
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||||| ||||| ||||||||| ||||||||||||| | || || ||||||||| | | | ||||||||||||| |||||||||||    
T  11161975 aaaaacaaacgaaagaaaactgaaaagatgtgaaatgacttattcaattaggatataaagaaaaacaacttgaaggggtgatttttgggtcaaaattgac 11161876  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    ||||||| |||||||||||||||||||||||||    
T  11161875 cctaaattacccctctaacaagaagaagaagaa 11161843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 31202551 - 31202419
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||   ||||| ||||||||| | ||| || |||||||||| |||||||||||    
T  31202551 aaaaacaaacgaaacaaaacagaaaatatgtgaaatcacttattcaattataatagaaagaaaaacaatttggatggatgatttttgggtcaaaattgac 31202452  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    | |||||||||| ||||| ||||||||||||||    
T  31202451 cttaaatcacccatctaaaaagaagaagaagaa 31202419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 24699925 - 24699791
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatc--ggaagggtgatttttggatcaaaattg 101  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||| | || ||| ||||| | |||  ||| ||||||||||||| |||||||||    
T  24699925 aaaagcaaatgaaagaaaacagaaaatatgtgaaatcacttatttaattaggatataagaaaaaaaacatctcggatgggtgatttttgggtcaaaattg 24699826  T
Q  102 accctaaatcacccctctaacaagaagaagaagaa 136  Q
    |||||||||||||| ||| ||||||||||||||||    
T  24699825 accctaaatcacccttctgacaagaagaagaagaa 24699791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 1039934 - 1040061
Alignment:
Q  9 caaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaa 108  Q
    |||| |||||||| ||||||||||||||||||||||||| |||||   ||||||||||| ||| ||||| |||||||||||||||||||||||||| |||    
T  1039934 caaatgaaagaaagcagaaaatatgtgaaatcacttattgaattagaatagaaggaaaaccaattcggatgggtgatttttggatcaaaattgaccttaa 1040033  T
Q  109 atcacccctctaacaagaagaagaagaaa 137  Q
    ||||  ||||||| |||||||||||||||    
T  1040034 atca-tcctctaaaaagaagaagaagaaa 1040061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 10338858 - 10338989
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||| | || |||||||||||| ||||| ||||||||||||  |||||||||||    
T  10338858 aaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaattcggaggggtgatttttgcgtcaaaattgac 10338957  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    | ||||||| |||||| | ||||| ||||||||    
T  10338958 cttaaatca-ccctctgaaaagaataagaagaa 10338989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 23971135 - 23971262
Alignment:
Q  9 caaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaa 108  Q
    |||||||||||||||| ||||||||||||||||||||||||||||   ||||||||||||||| ||||| | ||||||||| | |||||||| ||  |||    
T  23971135 caaacgaaagaaaacataaaatatgtgaaatcacttattcaattagaatagaaggaaaaacaactcggatgagtgattttttggtcaaaatttactttaa 23971234  T
Q  109 atcacccctctaacaagaagaagaagaa 136  Q
    |||||| |||||||||||| ||||||||    
T  23971235 atcacctctctaacaagaaaaagaagaa 23971262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 13570762 - 13570877
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||| |||| |||||||||||||||||||||||| ||||| | ||||| ||||||||| | ||| |  |||||||| |||||||||||||    
T  13570762 aaaaacaaacgaaaaaaaatagaaaatatgtgaaatcacttatttaattaggatagaatgaaaaacaattgggatgaatgatttttagatcaaaattgac 13570861  T
Q  104 cctaaatcacccctct 119  Q
     |||||||||||||||    
T  13570862 tctaaatcacccctct 13570877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 60 - 136
Target Start/End: Original strand, 7583856 - 7583932
Alignment:
Q  60 aaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatcacccctctaacaagaagaagaagaa 136  Q
    |||||||||||| ||||| ||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||    
T  7583856 aaggaaaaacaactcggatgggtgatttttgggtcaaaattgatcctaaatcacccctctgacaagaagaagaagaa 7583932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 9 - 112
Target Start/End: Original strand, 3204797 - 3204899
Alignment:
Q  9 caaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaa 108  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||   |||| |||||||||| |||| ||||| |||||||| ||||||||||| ||||    
T  3204797 caaacgaaagaaaacagaaaatatgtgaaatcactcattaaattagaatagatggaaaaacaattcgg-agggtaatttttgggtcaaaattgactctaa 3204895  T
Q  109 atca 112  Q
    ||||    
T  3204896 atca 3204899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 26 - 129
Target Start/End: Complemental strand, 10334245 - 10334142
Alignment:
Q  26 aaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatcacccctctaacaag 125  Q
    ||||||| |||| ||||||||| ||||| | ||||||||||||||| ||  | | |||||||||||||||||||||||||||||||| | ||||||||||    
T  10334245 aaaatatatgaactcacttatttaattaggatagaaggaaaaacaactcatatgagtgatttttggatcaaaattgaccctaaatcatctctctaacaag 10334146  T
Q  126 aaga 129  Q
    ||||    
T  10334145 aaga 10334142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 37128522 - 37128600
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggt 82  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||| || | ||||||||||||||| ||||| ||||    
T  37128522 aaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggatgggt 37128600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 7579891 - 7579942
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaag 55  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  7579891 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaag 7579942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 15288834 - 15288920
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttg 90  Q
    |||| ||||||||||||||||||||||| |||||||||| |||| ||||| | ||||| ||||||||| ||| | || |||||||||    
T  15288834 aaaaacaaacgaaagaaaacagaaaataagtgaaatcacgtatttaattaggatagaaagaaaaacaattcgaagggatgatttttg 15288920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 15469203 - 15469289
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttg 90  Q
    |||| ||||||||||||||||||||||| |||||||||| |||| ||||| | ||||| ||||||||| ||| | || |||||||||    
T  15469203 aaaaacaaacgaaagaaaacagaaaataagtgaaatcacgtatttaattaggatagaaagaaaaacaattcgaagggatgatttttg 15469289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 4757248 - 4757191
Alignment:
Q  14 gaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaa 71  Q
    |||||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||    
T  4757248 gaaagaaaacagaaaatatgtgaaatcatttatttaattatgatagaaggaaaaacaa 4757191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 22787585 - 22787539
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaa 50  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||    
T  22787585 aaaaacaaacgaaagaaaacagaaaatatgttaaatcacttattcaa 22787539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 136
Target Start/End: Original strand, 30027040 - 30027082
Alignment:
Q  94 caaaattgaccctaaatcacccctctaacaagaagaagaagaa 136  Q
    ||||| |||||||||||||||||||| ||||||||||||||||    
T  30027040 caaaaatgaccctaaatcacccctctgacaagaagaagaagaa 30027082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 32778992 - 32779069
Alignment:
Q  10 aaacgaaagaaaacagaaaatatgt-gaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatt 86  Q
    |||||||||||||| |||||||||| |||||| |||||| ||||| | || |||||||||||| ||| | ||||||||    
T  32778992 aaacgaaagaaaactgaaaatatgtggaaatctcttatttaattatgatataaggaaaaacaactcgaaggggtgatt 32779069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 113
Target Start/End: Original strand, 30039389 - 30039476
Alignment:
Q  26 aaaatatgtg-aaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatcac 113  Q
    |||||||||| ||||||| ||||||||||    |||||||||||||| ||||| | |||||||| || |||||||||||| ||||||||    
T  30039389 aaaatatgtggaaatcacatattcaattagaaaagaaggaaaaacaattcggatgagtgattttggg-tcaaaattgaccataaatcac 30039476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 57 - 119
Target Start/End: Original strand, 13576265 - 13576326
Alignment:
Q  57 tagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatcacccctct 119  Q
    ||||| ||||||||| ||||| || ||||||| || |||||||||| ||||||||||||||||    
T  13576265 tagaaagaaaaacaactcggagggatgattttagg-tcaaaattgatcctaaatcacccctct 13576326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 1e-45; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 4 - 133
Target Start/End: Original strand, 28664940 - 28665069
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||| |||||||||| || |||||||||||    
T  28664940 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggaggggtgattttagggtcaaaattgac 28665039  T
Q  104 cctaaatcacccctctaacaagaagaagaa 133  Q
    |||||||||||| ||| |||||||||||||    
T  28665040 cctaaatcacccatctgacaagaagaagaa 28665069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 45457589 - 45457716
Alignment:
Q  9 caaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaa 108  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||| | ||||||||||  ||||||||||||||||    
T  45457589 caaacgaaagaaaacataaaatatgtgaaatcacttattcaattaagatagaaggaaaaacaattcggaggagtgatttttgcgtcaaaattgaccctaa 45457688  T
Q  109 atcacccctctaacaagaagaagaagaa 136  Q
    ||||||||||||| |||||||| |||||    
T  45457689 atcacccctctaaaaagaagaaaaagaa 45457716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 5684458 - 5684325
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||| |||||  |||||||||||  |||||||||||    
T  5684458 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaatgaaaaacaattcggagaggtgatttttgcgtcaaaattgac 5684359  T
Q  104 cctaaatcacccctctaacaagaagaagaagaaa 137  Q
    |||||||||||||| ||| ||||| |||||||||    
T  5684358 cctaaatcacccctttaaaaagaataagaagaaa 5684325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 5709508 - 5709375
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||| |||||  |||||||||||  |||||||||||    
T  5709508 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaatgaaaaacaattcggagaggtgatttttgcgtcaaaattgac 5709409  T
Q  104 cctaaatcacccctctaacaagaagaagaagaaa 137  Q
    |||||||||||||| ||| ||||| |||||||||    
T  5709408 cctaaatcacccctttaaaaagaataagaagaaa 5709375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 42603797 - 42603929
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||| ||||| ||||||||||||  |||||||||||    
T  42603797 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaggggtgatttttgagtcaaaattgac 42603896  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    | ||||||||| |||||| ||||||||||||||    
T  42603897 cataaatcaccgctctaaaaagaagaagaagaa 42603929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 46026057 - 46026189
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||||| ||||||||| |||| ||||||||||||| | ||||||||||||||| ||||| | ||||||||||| |||||||||||    
T  46026057 aaaaacaaacgaaagaaaacaaaaaatatgttaaataacttattcaattaggatagaaggaaaaacaattcggatgtgtgatttttgggtcaaaattgac 46026156  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    |||||||||||||||| | ||||||||||||||    
T  46026157 cctaaatcacccctctgaaaagaagaagaagaa 46026189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 9785404 - 9785297
Alignment:
Q  10 aaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaa 109  Q
    |||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||| | ||||||||||||| |||||||||||||||||    
T  9785404 aaacaaaagaaaacaaaaaatatgtgaaatcacttattcaattaagatagaaggaaaaacaattcgaaggggtgatttttgggtcaaaattgaccctaaa 9785305  T
Q  110 tcacccct 117  Q
    ||||||||    
T  9785304 tcacccct 9785297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 39533008 - 39533134
Alignment:
Q  9 caaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaa 108  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||  | |||||||||| ||||||||||||||||    
T  39533008 caaacaaaagaaaacagaaaatatgtgaaatcacttattcaattaagatagaaggaaaaacaattcagagagatgatttttgggtcaaaattgaccctaa 39533107  T
Q  109 atcacccctctaacaagaagaagaagaa 136  Q
    |||| |||||||| |||||||| |||||    
T  39533108 atca-ccctctaaaaagaagaaaaagaa 39533134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 3 - 137
Target Start/End: Original strand, 48304422 - 48304556
Alignment:
Q  3 aaaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattga 102  Q
    ||||| ||||| |||||||||||||||| | |||||||||||||||||||| | ||| ||||||| ||| ||||| ||||||||||||| ||||||||||    
T  48304422 aaaaaacaaactaaagaaaacagaaaatctatgaaatcacttattcaattaggatagcaggaaaagcaattcggatgggtgatttttgggtcaaaattga 48304521  T
Q  103 ccctaaatcacccctctaacaagaagaagaagaaa 137  Q
    ||||||||||||||||| | |||||||| ||||||    
T  48304522 ccctaaatcacccctctgaaaagaagaaaaagaaa 48304556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 11833112 - 11832979
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcgga-agggtgatttttggatcaaaattga 102  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||| |  |||||||||||||| |||||  ||||||||||||| ||||||||||    
T  11833112 aaaaacaaacgaaagaatacagaaaatatgtgaaatcacttattcaattaggaaagaaggaaaaacaattcggagggggtgatttttgggtcaaaattga 11833013  T
Q  103 ccctaaatcacccctctaacaagaagaagaagaa 136  Q
    || ||||||| |||||| | ||||||||||||||    
T  11833012 ccataaatcatccctctgaaaagaagaagaagaa 11832979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 17473751 - 17473884
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||| ||||| |||||||||||||||||||||||||||||||||| | || |||||||||||| ||||| ||||||||||| | |||||||||||    
T  17473751 aaaaacaaatgaaaggaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaattcggaggggtgattttttggtcaaaattgac 17473850  T
Q  104 cctaaatcacccctctaacaagaagaagaagaaa 137  Q
    ||||||||||||| || | ||||| |||||||||    
T  17473851 cctaaatcaccccactgaaaagaataagaagaaa 17473884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 17579463 - 17579330
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||| ||||| |||||||||||||||||||||||||||||||||| | || |||||||||||| ||||| ||||||||||| | |||||||||||    
T  17579463 aaaaacaaatgaaaggaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaattcggaggggtgattttttggtcaaaattgac 17579364  T
Q  104 cctaaatcacccctctaacaagaagaagaagaaa 137  Q
    ||||||||||||| || | ||||| |||||||||    
T  17579363 cctaaatcaccccactgaaaagaataagaagaaa 17579330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 10574474 - 10574342
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||||||||||||||| |||||  ||||||||||| | || |||||||||||| ||||| ||||||||||||  |||||||||||    
T  10574474 aaaaacaaacgaaagaaaacagaaaatatgtaaaatcgtttattcaattaggataaaaggaaaaacaattcggaggggtgatttttgagtcaaaattgac 10574375  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    |||||||||||| ||||| |||||||| |||||    
T  10574374 cctaaatcacccatctaaaaagaagaaaaagaa 10574342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 21603555 - 21603424
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||| ||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||| || || ||||| ||||||| |||||||||||    
T  21603555 aaaaacaaaggaaagaaaacagagaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcagaggggtgctttttgg-tcaaaattgac 21603457  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    |||||||||||||||||| |  |||||||||||    
T  21603456 cctaaatcacccctctaaaacaaagaagaagaa 21603424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 36579340 - 36579472
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||| |||||||||| |||||||||| |||||||||||||| || | ||||||||||||||| ||||| |||||||||| || |||||||||||    
T  36579340 aaaaacaaacaaaagaaaacaaaaaatatgtggaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgattttcgggtcaaaattgac 36579439  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    ||||||||| |||||| | ||||||||||||||    
T  36579440 cctaaatcatccctcttaaaagaagaagaagaa 36579472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 41288046 - 41287918
Alignment:
Q  9 caaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaa-tcggaagggtgatttttggatcaaaattgacccta 107  Q
    |||||||||| ||||||||||||||||||||||| |||||||||| | ||||||||||||   | ||||| |||||||| |||| |||||||||||||||    
T  41288046 caaacgaaaggaaacagaaaatatgtgaaatcacctattcaattaggatagaaggaaaaaatcactcggatgggtgattattgggtcaaaattgacccta 41287947  T
Q  108 aatcacccctctaacaagaagaagaagaa 136  Q
    |||||||||||||| ||||||||||||||    
T  41287946 aatcacccctctaagaagaagaagaagaa 41287918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 42644769 - 42644637
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||| ||  | | ||||||||||  ||||||||||     
T  42644769 aaaaacaaacgaaagaaaacagagaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcaaatgagtgatttttgagtcaaaattgat 42644670  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    |||||||||||||||| | ||||||||||||||    
T  42644669 cctaaatcacccctctgaaaagaagaagaagaa 42644637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 10 - 136
Target Start/End: Complemental strand, 3266475 - 3266343
Alignment:
Q  10 aaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaa------aaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    ||||||||| |||||||||||||||||||||||||||||||||| | |||||||||      |||||| ||||| || ||||| ||||||||||||||||    
T  3266475 aaacgaaaggaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaagaaaaaaaacaactcggagggatgattattggatcaaaattgac 3266376  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    | |||||||||||||| ||||||||||||||||    
T  3266375 cataaatcacccctctgacaagaagaagaagaa 3266343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 14 - 137
Target Start/End: Original strand, 22747546 - 22747668
Alignment:
Q  14 gaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatcac 113  Q
    ||||||||||| ||||||||| |||||||||||||||||| | ||||||||||| ||| | ||| ||||||||||||| |||||||||||||||||||||    
T  22747546 gaaagaaaacataaaatatgtcaaatcacttattcaattaggatagaaggaaaa-caacttggaggggtgatttttgggtcaaaattgaccctaaatcac 22747644  T
Q  114 ccctctaacaagaagaagaagaaa 137  Q
    |||| | |||||||||| ||||||    
T  22747645 ccctttgacaagaagaataagaaa 22747668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 6667474 - 6667356
Alignment:
Q  19 aaaacagaaaatatgtgaaatcacttattcaattaagg-tagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatcacccct 117  Q
    |||||||||||||||||||||||||||||||| | ||  |||||| |||||||| ||||  ||||||||||||| ||||||||||||||||||||| |||    
T  6667474 aaaacagaaaatatgtgaaatcacttattcaaattagaatagaagaaaaaacaattcggtggggtgatttttgggtcaaaattgaccctaaatcactcct 6667375  T
Q  118 ctaacaagaagaagaagaa 136  Q
    |||| ||||||||||||||    
T  6667374 ctaaaaagaagaagaagaa 6667356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 4621395 - 4621528
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||||| ||||| || ||||||| |||||||||||| ||||||||||||||||| ||| ||| ||||||||| | |||||||||||    
T  4621395 aaaaacaaacgaaagaaaactgaaaacatatgaaatcgcttattcaattatggtagaaggaaaaacaactcgaaagagtgatttttaggtcaaaattgac 4621494  T
Q  104 cctaaatcacccctctaacaagaagaagaagaaa 137  Q
     |||||| ||| || | |||||||||||||||||    
T  4621495 tctaaataacctctttgacaagaagaagaagaaa 4621528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 15 - 136
Target Start/End: Original strand, 17509243 - 17509363
Alignment:
Q  15 aaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatcacc 114  Q
    |||| |||||||||||||||||||||||||||||||||| | || ||||||||| || |||| |||||||||||| | |||||||||||||||||||| |    
T  17509243 aaaggaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaataattcgg-agggtgattttttggtcaaaattgaccctaaatcatc 17509341  T
Q  115 cctctaacaagaagaagaagaa 136  Q
    ||||| | ||||||||||||||    
T  17509342 cctctgaaaagaagaagaagaa 17509363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 15 - 136
Target Start/End: Complemental strand, 17543971 - 17543851
Alignment:
Q  15 aaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatcacc 114  Q
    |||| |||||||||||||||||||||||||||||||||| | || ||||||||| || ||||| ||||||||||| | |||||||||||||||||||| |    
T  17543971 aaaggaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaataattcgga-gggtgattttttggtcaaaattgaccctaaatcatc 17543873  T
Q  115 cctctaacaagaagaagaagaa 136  Q
    ||||| | ||||||||||||||    
T  17543872 cctctgaaaagaagaagaagaa 17543851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 4 - 133
Target Start/End: Original strand, 24320251 - 24320380
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||| |||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||| ||| | | ||||||||||  |||||||||||    
T  24320251 aaaaacaaacaaaagaaaacaaaaaatatgtgaaatcacttattaaattaagatagaaggaaaaacaactcgaatgagtgatttttgagtcaaaattgac 24320350  T
Q  104 cctaaatcacccctctaacaagaagaagaa 133  Q
    | ||||| |||  |||||||||||||||||    
T  24320351 cttaaataaccattctaacaagaagaagaa 24320380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 21990755 - 21990639
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaagg-aaaaacaaatcggaagggtgatttttggatcaaaattga 102  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||| | ||| ||| |||||||| ||||| |||||||||||   ||||||||||    
T  21990755 aaaaacaaacgaaagaaaacagaatatatgtgaaatcacttattcaattaggatagcaggaaaaaacaattcggaggggtgatttttcagtcaaaattga 21990656  T
Q  103 ccctaaatcacccctct 119  Q
    |||||||||||||||||    
T  21990655 ccctaaatcacccctct 21990639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 27535551 - 27535416
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatat--gtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattg 101  Q
    |||| |||| |||| ||||||||||||||  |||||||||||||| ||||||   ||||||||||||||| ||||| ||||||||||||||| |||||||    
T  27535551 aaaaacaaatgaaataaaacagaaaatatatgtgaaatcacttatacaattagaatagaaggaaaaacaattcggatgggtgatttttggataaaaattg 27535452  T
Q  102 accctaaatcacccctctaacaagaagaagaagaaa 137  Q
    ||||||||||||||||||   || ||||||||||||    
T  27535451 accctaaatcacccctctgtaaaaaagaagaagaaa 27535416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 4 - 130
Target Start/End: Complemental strand, 45482157 - 45482031
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||| ||  || |||||||||||||||||||||| ||||| | ||||||||||||||  ||||| |||||||||| || |||||||||||    
T  45482157 aaaaacaaacgaaacaacgcataaaatatgtgaaatcacttatttaattaggatagaaggaaaaacagctcggaggggtgattttggggtcaaaattgac 45482058  T
Q  104 cctaaatcacccctctaacaagaagaa 130  Q
    |||||||||| ||||| ||||||||||    
T  45482057 cctaaatcactcctctgacaagaagaa 45482031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 1281165 - 1281297
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||   || || ||||||||| ||||| ||||||||||| | ||||||| |||    
T  1281165 aaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaattagaatataatgaaaaacaattcggatgggtgattttttggtcaaaatggac 1281264  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    |||||||||||| ||| | ||||| ||| ||||    
T  1281265 cctaaatcacccatctgaaaagaataagtagaa 1281297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 2622685 - 2622555
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||| ||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||| ||||| | ||||||||||| ||||||||||     
T  2622685 aaaaacaaacgcaagaaaacagaaaatatctgaaattacttattcaattaagatagaaggaaaaacaattcggatgcgtgatttttgggtcaaaattga- 2622587  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    | ||||||| |||||| |  |||||||||||||    
T  2622586 cttaaatca-ccctctgaggagaagaagaagaa 2622555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 11 - 136
Target Start/End: Complemental strand, 32740839 - 32740714
Alignment:
Q  11 aacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgat-ttttggatcaaaattgaccctaaa 109  Q
    |||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||| |||   ||||||| |||| | ||||||||||| |||||    
T  32740839 aacgaaagaaaacaaaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcgagggggtgatttttttggtcaaaattgactctaaa 32740740  T
Q  110 tcacccctctaacaagaagaagaagaa 136  Q
    ||| |||||| | ||||||||||||||    
T  32740739 tca-ccctctgaaaagaagaagaagaa 32740714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 10094534 - 10094460
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaa 78  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||| ||||||    
T  10094534 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaattcggaa 10094460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 15674640 - 15674712
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcgg 76  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||| ||||    
T  15674640 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggataggaggaaaaacaattcgg 15674712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 32643105 - 32643035
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatc 74  Q
    |||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||    
T  32643105 aaaaacaaacaaaagaaaacagaaaatatgtgaaatcacttgttcaattaaggtagaagaaaaaacgaatc 32643035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 4 - 133
Target Start/End: Original strand, 14657849 - 14657972
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatat--gtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattg 101  Q
    |||| ||||| ||||||||| ||||||||  ||||||| ||||||||||||||| ||||||||||||||  |||||  ||||||||| ||        ||    
T  14657849 aaaaacaaacaaaagaaaactgaaaatatatgtgaaataacttattcaattaagatagaaggaaaaacagctcggattggtgattttggg--------tg 14657940  T
Q  102 accctaaatcacccctctaacaagaagaagaa 133  Q
    | ||||||||||||||||||||||||||||||    
T  14657941 atcctaaatcacccctctaacaagaagaagaa 14657972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 43847158 - 43847083
Alignment:
Q  9 caaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtga 84  Q
    |||||||| |||||||||||||||||||||||||||||||||||| | ||  ||||||||||| ||||| ||||||    
T  43847158 caaacgaaggaaaacagaaaatatgtgaaatcacttattcaattaggataagaggaaaaacaattcggaggggtga 43847083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 24988443 - 24988514
Alignment:
Q  64 aaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatcacccctctaacaagaagaagaagaa 136  Q
    |||||||| ||||| |||||||||| || |||||||||||||| |||||||||||| ||||||||||||||||    
T  24988443 aaaaacaactcggaggggtgattttggg-tcaaaattgaccctgaatcacccctctgacaagaagaagaagaa 24988514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 36719628 - 36719680
Alignment:
Q  63 gaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatcaccc 115  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  36719628 gaaaaacaattcggaggggtgatttttggatcaaaattgaccctaaatcaccc 36719680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 60 - 130
Target Start/End: Complemental strand, 40761626 - 40761556
Alignment:
Q  60 aaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatcacccctctaacaagaagaa 130  Q
    |||||||||||  ||||| ||||||||||||| |||||||||||||||||||| |||||| | ||||||||    
T  40761626 aaggaaaaacagttcggaggggtgatttttgggtcaaaattgaccctaaatcatccctctgaaaagaagaa 40761556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 115
Target Start/End: Original strand, 21954854 - 21954957
Alignment:
Q  12 acgaaagaaaacagaaaatatgtg-aaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaat 110  Q
    |||||||||||| || |||||||| |||||| ||||| ||||| | ||||| ||||||||| ||||| | |||||||| || | ||||||||||||||||    
T  21954854 acgaaagaaaactgacaatatgtggaaatcatttatttaattaggatagaatgaaaaacaactcggatgagtgattttgggtt-aaaattgaccctaaat 21954952  T
Q  111 caccc 115  Q
    |||||    
T  21954953 caccc 21954957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 37376064 - 37376194
Alignment:
Q  9 caaacgaaagaaaacagaaaatatg------tgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattga 102  Q
    |||||||||||||| ||||||||||      ||||| |||||||||||||| | |||||||||||| || ||| | ||||||| ||||  |||||||| |    
T  37376064 caaacgaaagaaaatagaaaatatgagaaactgaaaccacttattcaatta-gatagaaggaaaaataattcgaaggggtgatctttgagtcaaaattta 37376162  T
Q  103 ccctaaatcacccctctaacaagaagaagaag 134  Q
     |||||||||||| ||| | ||||||||||||    
T  37376163 tcctaaatcacccttctgaaaagaagaagaag 37376194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 136
Target Start/End: Original strand, 9720017 - 9720128
Alignment:
Q  19 aaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatcacccctc 118  Q
    ||||||||||||||||||||||||||||||||||| | || ||| |||||||| | |||      |||||||  |||||||||||| |||||| |||  |    
T  9720017 aaaacagaaaatatgtgaaatcacttattcaattacgatataagaaaaaacaatttgga------atttttgagtcaaaattgaccataaatcgccctgc 9720110  T
Q  119 taacaagaagaagaagaa 136  Q
    | | ||||||||||||||    
T  9720111 tgaaaagaagaagaagaa 9720128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 93 - 137
Target Start/End: Original strand, 15674742 - 15674786
Alignment:
Q  93 tcaaaattgaccctaaatcacccctctaacaagaagaagaagaaa 137  Q
    ||||||||||||||||||||||||||| | |||||||||||||||    
T  15674742 tcaaaattgaccctaaatcacccctctgaaaagaagaagaagaaa 15674786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 40761699 - 40761659
Alignment:
Q  9 caaacgaaagaaaacagaaaatatgtgaaatcacttattca 49  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  40761699 caaacgaaagaaaacataaaatatgtgaaatcacttattca 40761659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 115
Target Start/End: Complemental strand, 39707351 - 39707272
Alignment:
Q  35 gaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaaatcaccc 115  Q
    ||||| ||||||| ||||| | ||||| ||||||||| |||||  | ||||||| || |||||||||||||||||||||||    
T  39707351 gaaataacttatttaattaggatagaaagaaaaacaactcggagtgatgattttggg-tcaaaattgaccctaaatcaccc 39707272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 119
Target Start/End: Complemental strand, 17221752 - 17221643
Alignment:
Q  9 caaacgaaagaaaacagaaaatatgtg-aaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgacccta 107  Q
    ||||||||||||| | ||||||||||| ||||||  ||||||||||  ||| || | ||||||| || || ||||||||||||| |||||||| ||  ||    
T  17221752 caaacgaaagaaacctgaaaatatgtgaaaatcatatattcaattagagtataatg-aaaacaattcagaggggtgatttttgg-tcaaaattcactata 17221655  T
Q  108 aatcacccctct 119  Q
    ||||||||||||    
T  17221654 aatcacccctct 17221643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 26161073 - 26161038
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaat 39  Q
    |||| |||||||||||||||||||||||||||||||    
T  26161073 aaaaacaaacgaaagaaaacagaaaatatgtgaaat 26161038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 89; Significance: 1e-42; HSPs: 2)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 1114 - 1246
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||| | ||||||||||||| |||||||||||    
T  1114 aaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttattcaattagggtagaaggaaaaacaattcgcaggggtgatttttgggtcaaaattgac 1213  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    | |||||||||||||| |||| ||||| |||||    
T  1214 cttaaatcacccctctgacaaaaagaaaaagaa 1246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 62 - 1
Alignment:
Q  10 aaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaa 71  Q
    |||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  62 aaacaaaagaaaacaaaaaatatgtgaaatcacttattcaattaagatagaaggaaaaacaa 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 4 - 133
Target Start/End: Complemental strand, 2995 - 2864
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaa--caaatcggaagggtgatttttggatcaaaattg 101  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||  ||| ||||| |||||||| |||| |||||||||    
T  2995 aaaaacaaacgaaaggaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaaaacaactcggaggggtgattattgggtcaaaattg 2896  T
Q  102 accctaaatcacccctctaacaagaagaagaa 133  Q
    ||||||||||||||||||||||||||||||||    
T  2895 accctaaatcacccctctaacaagaagaagaa 2864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 35177 - 35043
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatat--gtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattg 101  Q
    |||| ||||||||||||||||||||||||  ||||||||||||||||||||| | ||||||||||||||| ||||| ||||||||||||| |||||||||    
T  35177 aaaaacaaacgaaagaaaacagaaaatatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggatgggtgatttttgggtcaaaattg 35078  T
Q  102 accctaaatcacccctctaacaagaagaagaagaa 136  Q
    ||||||||||||| || | |||| |||||||||||    
T  35077 accctaaatcacctctttgacaaaaagaagaagaa 35043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 74257 - 74142
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||| ||||||||||||| ||||||||||     
T  74257 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggatgggtgatttttgggtcaaaattgat 74158  T
Q  104 cctaaatcacccctct 119  Q
     ||||||||| |||||    
T  74157 tctaaatcactcctct 74142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 4 - 132
Target Start/End: Original strand, 404286 - 404414
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||| | ||| | ||||||| | ||||| |||||||||||||||||||||||||    
T  404286 aaaaacaaacggaagaaaacagaaaatatgtgaaatcacttattcaattaggatagcaagaaaaactattcggatgggtgatttttggatcaaaattgac 404385  T
Q  104 cctaaatcacccctctaacaagaagaaga 132  Q
    | |||||| ||||||| | ||||||||||    
T  404386 cttaaatcgcccctctgaaaagaagaaga 404414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 9 - 117
Target Start/End: Original strand, 2450 - 2557
Alignment:
Q  9 caaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgaccctaa 108  Q
    |||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||| || | |||||||||||||| |||||| |||||||||    
T  2450 caaacgaaagaaaacagaaaatatgtgaaatcacttattcgattatgatagaaggaaaaacaactcag-agggtgatttttgggtcaaaaatgaccctaa 2548  T
Q  109 atcacccct 117  Q
    |||||||||    
T  2549 atcacccct 2557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1350 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 1667 - 1534
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| | ||||| ||  |||||||||||| ||||||| ||     
T  1667 aaaaacaaacgaaagaaaacataaaatatgtgaaatcacttattcaattatggtagaaggaaaca-aaatcagagaggtgatttttgggtcaaaatggaa 1569  T
Q  104 cctaaatcacccctctaacaagaagaagaagaaag 138  Q
    ||||||| |||||||| |||| ||| |||||||||    
T  1568 cctaaattacccctctgacaacaagtagaagaaag 1534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 7152 - 7255
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||| ||||| ||||||||||||| ||||| | |||    
T  7152 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaattcggaggggtgatttttgggtcaaattggac 7251  T
Q  104 ccta 107  Q
    ||||    
T  7252 ccta 7255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 4095 - 4226
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaagggtgatttttggatcaaaattgac 103  Q
    |||| |||||||||||||||| |||||||||||||||||||||| ||||| | ||||||||| | ||| ||  | | ||||||||||  |||||||||||    
T  4095 aaaaacaaacgaaagaaaacataaaatatgtgaaatcacttatttaattaggatagaaggaaga-caactcaaaggagtgatttttgtgtcaaaattgac 4193  T
Q  104 cctaaatcacccctctaacaagaagaagaagaa 136  Q
    ||||||||| || ||| ||||||||||||||||    
T  4194 cctaaatcagccttctgacaagaagaagaagaa 4226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 13273 - 13408
Alignment:
Q  4 aaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaa----tcggaagggtgatttttggatcaaaat 99  Q
    |||| ||||| ||||||||||||||| ||||||||||||||||||||||| | || ||  ||||| |||    ||||| |||||||||||||||||||||    
T  13273 aaaaacaaacaaaagaaaacagaaaagatgtgaaatcacttattcaattaggataaaaaaaaaaaaaaacaattcggaggggtgatttttggatcaaaat 13372  T
Q  100 tgaccctaaatcacccctctaacaagaagaagaagaa 136  Q
    ||||||||||||||| |||| | ||||| ||||||||    
T  13373 tgaccctaaatcacctctctgaaaagaa-aagaagaa 13408  T

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