View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12764_low_4 (Length: 253)
Name: NF12764_low_4
Description: NF12764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12764_low_4 |
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Alignment Details
Target: chr1 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 12 - 237
Target Start/End: Complemental strand, 51961892 - 51961678
Alignment:
| Q |
12 |
aaagagaacttcatgtgtctcttggatttaatagctctataacatgttacatgctgcagagaatcaaaatcacacaacatatcaatttttgtaagtcaat |
111 |
Q |
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| T |
51961892 |
aaagagaacttcatgtgtctcttggatttaatagctctataacatgttacatgctgcagagaatcaaaatcacacaacatatcaatttttgtaagtcaat |
51961793 |
T |
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| Q |
112 |
tttttctagaagtatatagtagtgtatatgttccctctctatatgatgaaaaatggatatatatacaatacttatcattgagatttcagatgcatgttac |
211 |
Q |
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| T |
51961792 |
tttttctagaagtatatagtagtgtatatgttccctctctatatgatgaaaaatgga----tatacaatacttatcattg-------agatgcatgttac |
51961704 |
T |
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| Q |
212 |
ttgtgaaatataattgacgtgcattt |
237 |
Q |
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| T |
51961703 |
ttgtgaaatataattgacgtgcattt |
51961678 |
T |
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