View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12765_low_20 (Length: 284)

Name: NF12765_low_20
Description: NF12765
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12765_low_20
NF12765_low_20
[»] chr1 (35 HSPs)
chr1 (120-275)||(18583423-18583578)
chr1 (120-277)||(23442861-23443018)
chr1 (120-277)||(33611289-33611446)
chr1 (120-277)||(49786391-49786548)
chr1 (132-277)||(41584556-41584701)
chr1 (120-277)||(52744722-52744879)
chr1 (120-277)||(17000501-17000659)
chr1 (120-277)||(34162600-34162758)
chr1 (132-277)||(45046741-45046886)
chr1 (120-277)||(45567769-45567926)
chr1 (132-265)||(15069732-15069865)
chr1 (132-266)||(7011344-7011478)
chr1 (120-257)||(34006403-34006541)
chr1 (120-266)||(49677617-49677763)
chr1 (120-265)||(28866509-28866654)
chr1 (122-257)||(40650556-40650691)
chr1 (120-277)||(40907813-40907970)
chr1 (132-240)||(38885373-38885481)
chr1 (120-277)||(42546090-42546248)
chr1 (122-265)||(27794966-27795108)
chr1 (121-263)||(25563294-25563436)
chr1 (120-264)||(26723367-26723511)
chr1 (165-265)||(44573021-44573121)
chr1 (124-257)||(6223634-6223762)
chr1 (187-277)||(32817557-32817647)
chr1 (120-265)||(24472706-24472851)
chr1 (132-263)||(3561226-3561357)
chr1 (132-253)||(42929031-42929152)
chr1 (230-277)||(32542516-32542563)
chr1 (124-177)||(890748-890801)
chr1 (201-266)||(9445846-9445911)
chr1 (201-264)||(800552-800615)
chr1 (132-227)||(45880000-45880095)
chr1 (201-263)||(43318940-43319002)
chr1 (194-263)||(9446048-9446117)
[»] chr8 (38 HSPs)
chr8 (120-277)||(31519771-31519928)
chr8 (123-269)||(21004515-21004661)
chr8 (132-277)||(8885344-8885489)
chr8 (136-265)||(42280786-42280915)
chr8 (122-276)||(9073628-9073782)
chr8 (132-277)||(3094808-3094953)
chr8 (120-277)||(27927820-27927977)
chr8 (120-277)||(44106346-44106503)
chr8 (120-277)||(34853451-34853608)
chr8 (122-263)||(36980706-36980847)
chr8 (121-266)||(40328031-40328176)
chr8 (121-277)||(40392659-40392815)
chr8 (120-266)||(11698195-11698341)
chr8 (132-277)||(14163948-14164093)
chr8 (120-277)||(17119758-17119915)
chr8 (120-277)||(28916898-28917055)
chr8 (120-265)||(36165716-36165862)
chr8 (133-265)||(1076690-1076822)
chr8 (124-258)||(36317938-36318072)
chr8 (136-266)||(28423555-28423684)
chr8 (120-257)||(6395227-6395364)
chr8 (132-277)||(4259528-4259671)
chr8 (208-277)||(16310722-16310791)
chr8 (132-257)||(34645520-34645645)
chr8 (209-277)||(40994915-40994983)
chr8 (132-254)||(8621528-8621652)
chr8 (208-277)||(37248681-37248750)
chr8 (209-263)||(31234486-31234540)
chr8 (201-263)||(33472208-33472270)
chr8 (194-263)||(9845323-9845392)
chr8 (194-263)||(10833468-10833537)
chr8 (133-263)||(7981651-7981781)
chr8 (201-263)||(33472415-33472477)
chr8 (201-257)||(10840717-10840773)
chr8 (213-257)||(24627717-24627761)
chr8 (208-263)||(7982515-7982570)
chr8 (213-263)||(41530812-41530862)
chr8 (148-257)||(39093651-39093760)
[»] chr3 (43 HSPs)
chr3 (120-277)||(43472848-43473005)
chr3 (120-277)||(52777354-52777511)
chr3 (120-269)||(2358501-2358650)
chr3 (124-277)||(47302143-47302294)
chr3 (120-277)||(50716375-50716533)
chr3 (120-277)||(50796314-50796472)
chr3 (132-277)||(47123149-47123294)
chr3 (121-277)||(3351946-3352102)
chr3 (132-252)||(46622686-46622806)
chr3 (120-277)||(28873128-28873286)
chr3 (120-265)||(38977627-38977772)
chr3 (132-277)||(47130515-47130660)
chr3 (121-277)||(35142197-35142353)
chr3 (120-265)||(49096105-49096251)
chr3 (120-225)||(3938357-3938462)
chr3 (120-277)||(34821222-34821379)
chr3 (120-277)||(47739812-47739968)
chr3 (132-276)||(501032-501176)
chr3 (121-240)||(30721690-30721809)
chr3 (120-263)||(35345788-35345931)
chr3 (132-265)||(51258538-51258672)
chr3 (132-277)||(3902697-3902842)
chr3 (132-257)||(46624863-46624988)
chr3 (152-277)||(51540525-51540650)
chr3 (120-265)||(39149944-39150089)
chr3 (124-265)||(5127782-5127923)
chr3 (134-257)||(40062522-40062645)
chr3 (120-276)||(51492923-51493080)
chr3 (190-277)||(33438644-33438731)
chr3 (216-277)||(3937502-3937563)
chr3 (133-239)||(29048503-29048610)
chr3 (120-237)||(4300159-4300276)
chr3 (132-197)||(33439384-33439449)
chr3 (120-257)||(54229776-54229913)
chr3 (132-239)||(14828809-14828917)
chr3 (201-263)||(8735530-8735592)
chr3 (201-263)||(9087771-9087833)
chr3 (132-263)||(47979895-47980028)
chr3 (201-265)||(33842034-33842098)
chr3 (132-263)||(47769399-47769530)
chr3 (213-263)||(45244527-45244577)
chr3 (176-277)||(27143351-27143452)
chr3 (186-266)||(29035933-29036013)
[»] chr7 (37 HSPs)
chr7 (121-277)||(3304638-3304794)
chr7 (121-277)||(8155022-8155178)
chr7 (122-269)||(31643172-31643318)
chr7 (120-277)||(47202617-47202767)
chr7 (120-265)||(3936243-3936388)
chr7 (120-277)||(36468416-36468573)
chr7 (120-276)||(33573922-33574078)
chr7 (122-277)||(9151919-9152074)
chr7 (132-277)||(42925531-42925677)
chr7 (120-277)||(42864981-42865138)
chr7 (132-277)||(19818503-19818648)
chr7 (132-245)||(43737237-43737350)
chr7 (123-257)||(24690215-24690350)
chr7 (123-277)||(36408494-36408648)
chr7 (120-240)||(36629363-36629483)
chr7 (122-253)||(7115151-7115282)
chr7 (152-277)||(28230379-28230504)
chr7 (136-277)||(33151331-33151467)
chr7 (132-265)||(1518842-1518975)
chr7 (120-277)||(19225477-19225634)
chr7 (124-265)||(31985400-31985541)
chr7 (120-257)||(36946171-36946307)
chr7 (124-212)||(26555040-26555128)
chr7 (163-263)||(5278401-5278501)
chr7 (121-266)||(6467020-6467165)
chr7 (201-277)||(24042148-24042224)
chr7 (121-227)||(37398771-37398877)
chr7 (132-263)||(48776100-48776233)
chr7 (172-257)||(16983673-16983758)
chr7 (179-266)||(37518233-37518320)
chr7 (120-226)||(39581913-39582019)
chr7 (202-263)||(8214462-8214523)
chr7 (120-193)||(37518142-37518215)
chr7 (141-277)||(48705899-48706035)
chr7 (208-263)||(8214257-8214312)
chr7 (210-265)||(48775743-48775798)
chr7 (122-174)||(47239570-47239622)
[»] chr4 (48 HSPs)
chr4 (121-269)||(6228693-6228841)
chr4 (120-277)||(32441941-32442098)
chr4 (121-269)||(34973003-34973151)
chr4 (124-275)||(6003556-6003707)
chr4 (121-269)||(49397147-49397299)
chr4 (120-277)||(41412977-41413134)
chr4 (122-277)||(53893906-53894061)
chr4 (120-277)||(25491274-25491431)
chr4 (132-265)||(2505922-2506055)
chr4 (120-277)||(40703795-40703952)
chr4 (133-277)||(48318956-48319100)
chr4 (120-235)||(54631371-54631486)
chr4 (121-277)||(55052498-55052655)
chr4 (123-277)||(17933019-17933173)
chr4 (132-277)||(19835651-19835796)
chr4 (120-277)||(52089316-52089473)
chr4 (120-276)||(25752322-25752479)
chr4 (132-277)||(31582313-31582458)
chr4 (132-266)||(41322983-41323117)
chr4 (120-277)||(46440151-46440310)
chr4 (133-276)||(7931789-7931931)
chr4 (132-265)||(27742004-27742138)
chr4 (124-275)||(38536303-38536455)
chr4 (120-265)||(8106536-8106682)
chr4 (136-277)||(25538873-25539015)
chr4 (124-213)||(29822775-29822864)
chr4 (147-277)||(3703155-3703285)
chr4 (120-257)||(47456751-47456888)
chr4 (120-180)||(38417020-38417080)
chr4 (132-275)||(7863574-7863717)
chr4 (132-263)||(14474103-14474233)
chr4 (132-199)||(49001451-49001518)
chr4 (181-265)||(47873953-47874037)
chr4 (124-227)||(55838875-55838978)
chr4 (201-263)||(25140466-25140528)
chr4 (213-263)||(25140894-25140944)
chr4 (164-277)||(27879679-27879792)
chr4 (127-179)||(4936614-4936666)
chr4 (163-266)||(37222103-37222206)
chr4 (209-277)||(49002822-49002890)
chr4 (131-227)||(55774704-55774800)
chr4 (164-227)||(1788175-1788238)
chr4 (186-245)||(39118308-39118367)
chr4 (174-257)||(42497809-42497892)
chr4 (213-263)||(25140687-25140737)
chr4 (124-237)||(20078719-20078832)
chr4 (244-277)||(23524038-23524071)
chr4 (152-253)||(46381079-46381180)
[»] chr5 (49 HSPs)
chr5 (120-276)||(12464998-12465154)
chr5 (120-266)||(7884289-7884435)
chr5 (120-277)||(4064598-4064756)
chr5 (120-277)||(20891698-20891855)
chr5 (132-265)||(32841861-32841995)
chr5 (132-266)||(37183672-37183806)
chr5 (120-265)||(31221218-31221363)
chr5 (132-277)||(38871756-38871901)
chr5 (132-266)||(6156827-6156961)
chr5 (120-257)||(14111972-14112107)
chr5 (120-266)||(15957845-15957991)
chr5 (132-266)||(39524872-39525006)
chr5 (120-277)||(33487695-33487853)
chr5 (132-277)||(15799310-15799455)
chr5 (120-265)||(31929004-31929148)
chr5 (132-265)||(28083269-28083402)
chr5 (121-277)||(29862697-29862854)
chr5 (120-277)||(38692662-38692819)
chr5 (120-263)||(23269436-23269579)
chr5 (132-228)||(26898694-26898790)
chr5 (121-266)||(24203564-24203709)
chr5 (120-276)||(38372395-38372543)
chr5 (120-266)||(26095188-26095334)
chr5 (132-230)||(27212836-27212934)
chr5 (120-277)||(12847528-12847685)
chr5 (132-265)||(13908645-13908778)
chr5 (121-266)||(40619865-40620015)
chr5 (206-277)||(26190263-26190334)
chr5 (120-186)||(26190201-26190267)
chr5 (121-227)||(33901094-33901200)
chr5 (132-263)||(27158183-27158314)
chr5 (211-266)||(27494123-27494178)
chr5 (132-263)||(6800818-6800949)
chr5 (122-232)||(26622242-26622350)
chr5 (201-263)||(8739148-8739210)
chr5 (201-263)||(16429381-16429443)
chr5 (201-263)||(28445169-28445231)
chr5 (136-257)||(41639385-41639509)
chr5 (142-223)||(7036677-7036758)
chr5 (194-263)||(8738938-8739007)
chr5 (194-263)||(21070465-21070534)
chr5 (122-263)||(40613556-40613697)
chr5 (201-263)||(8973569-8973631)
chr5 (219-277)||(25747110-25747168)
chr5 (210-263)||(34530314-34530367)
chr5 (194-266)||(16429168-16429240)
chr5 (217-263)||(28445381-28445427)
chr5 (213-263)||(38641033-38641083)
chr5 (132-257)||(41253405-41253530)
[»] chr6 (29 HSPs)
chr6 (120-267)||(21514910-21515057)
chr6 (122-277)||(4508183-4508338)
chr6 (124-277)||(5638985-5639138)
chr6 (120-266)||(2813103-2813250)
chr6 (120-277)||(23406919-23407077)
chr6 (133-275)||(14587452-14587594)
chr6 (134-275)||(1945423-1945564)
chr6 (122-277)||(29519402-29519557)
chr6 (144-245)||(32044537-32044638)
chr6 (141-277)||(24604261-24604397)
chr6 (132-263)||(2539588-2539719)
chr6 (132-266)||(3717173-3717308)
chr6 (120-266)||(5699699-5699846)
chr6 (123-265)||(9905249-9905392)
chr6 (120-277)||(17264533-17264690)
chr6 (132-266)||(13800918-13801052)
chr6 (122-263)||(34528577-34528718)
chr6 (136-266)||(7734221-7734351)
chr6 (120-239)||(29289504-29289623)
chr6 (133-259)||(16450355-16450481)
chr6 (123-259)||(6704009-6704144)
chr6 (124-263)||(236931-237069)
chr6 (120-163)||(33413365-33413408)
chr6 (121-257)||(14037845-14037978)
chr6 (132-257)||(3365808-3365933)
chr6 (121-237)||(10310311-10310427)
chr6 (212-263)||(17501003-17501054)
chr6 (242-277)||(32035231-32035266)
chr6 (122-179)||(7412971-7413028)
[»] scaffold0010 (1 HSPs)
scaffold0010 (120-265)||(140620-140765)
[»] chr2 (33 HSPs)
chr2 (120-257)||(32187743-32187880)
chr2 (152-277)||(36948851-36948976)
chr2 (121-266)||(41510304-41510448)
chr2 (121-277)||(39447285-39447441)
chr2 (120-265)||(41203060-41203205)
chr2 (120-277)||(42894500-42894657)
chr2 (132-276)||(33452329-33452473)
chr2 (120-266)||(15994987-15995133)
chr2 (132-276)||(25217660-25217805)
chr2 (120-245)||(41854778-41854903)
chr2 (123-257)||(19109892-19110026)
chr2 (120-277)||(5507542-5507699)
chr2 (152-277)||(44465633-44465758)
chr2 (135-257)||(16750318-16750439)
chr2 (132-266)||(36875119-36875253)
chr2 (132-277)||(34517224-34517369)
chr2 (132-257)||(35251073-35251198)
chr2 (122-245)||(30763804-30763927)
chr2 (163-265)||(45153708-45153810)
chr2 (142-277)||(8388774-8388909)
chr2 (120-253)||(38308706-38308840)
chr2 (120-259)||(42478884-42479023)
chr2 (124-227)||(45293813-45293916)
chr2 (154-265)||(17474707-17474818)
chr2 (131-257)||(37773700-37773827)
chr2 (136-227)||(26228239-26228330)
chr2 (201-263)||(17766784-17766846)
chr2 (124-197)||(13704690-13704763)
chr2 (212-266)||(9847386-9847440)
chr2 (201-263)||(34519492-34519554)
chr2 (132-173)||(27670723-27670764)
chr2 (132-197)||(38065463-38065528)
chr2 (201-263)||(9847167-9847229)
[»] scaffold0027 (1 HSPs)
scaffold0027 (120-277)||(141843-141999)
[»] scaffold0508 (1 HSPs)
scaffold0508 (120-266)||(3273-3420)
[»] scaffold0137 (1 HSPs)
scaffold0137 (124-262)||(9380-9518)
[»] scaffold0182 (1 HSPs)
scaffold0182 (201-264)||(23238-23301)
[»] scaffold0006 (2 HSPs)
scaffold0006 (136-263)||(59865-59992)
scaffold0006 (209-265)||(59495-59551)


Alignment Details
Target: chr1 (Bit Score: 128; Significance: 3e-66; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 120 - 275
Target Start/End: Original strand, 18583423 - 18583578
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||| |||||||||||||||||| ||    
T  18583423 ggggaagtttcagagcaatccgatcaagtagcccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggataagagttaggcag 18583522  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgc 275  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18583523 attaatattgtccctaaaatggctatacatgttacaaatatgtttaggatttgtgc 18583578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 120 - 277
Target Start/End: Complemental strand, 23443018 - 23442861
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    |||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||    
T  23443018 ggggaagtttcagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggataagagttaggaag 23442919  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  23442918 attaatattgtccctaaaatggctgtacatgttacaaatatgtttaggatttgtgctg 23442861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 120 - 277
Target Start/End: Original strand, 33611289 - 33611446
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||| |||||||||||| ||||||||    
T  33611289 ggggaagtttcagagcaatccgatcaagtagcccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggataagatttaggaag 33611388  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    || |||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  33611389 ataaatattgtccttaaaatggctatacatgttacaaatatgtttaggatttgtgctg 33611446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 120 - 277
Target Start/End: Complemental strand, 49786548 - 49786391
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    |||||||||| |||||||||||||||||||| |||||||   ||||||||||||| |||| |||| | |||||||||| |||||||||||||||||||||    
T  49786548 ggggaagtttcagagcaatccgatcaagtaggccgaaaacttgatttttgactaaaaacatgtaacattgacccaaaacaaaaggataagagttaggaag 49786449  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||    
T  49786448 attaatattgtccataaaatggctatacatgttacaaataagtttaggatttgtgctg 49786391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 132 - 277
Target Start/End: Original strand, 41584556 - 41584701
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||| | |||||| ||||||||||||||||||||||||    
T  41584556 gagcaatccgatcaagtagcccgaaaacccgatttttgactaagaacatgtaacaatgacccaaaacagaaggatgagagttaggaagattaatattgtc 41584655  T
Q  232 cctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    | ||||||| |||| ||||||||||| |||||||| || |||||||    
T  41584656 cataaaatgactatccatgttacaaacatgtttagaatttgtgctg 41584701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 120 - 277
Target Start/End: Original strand, 52744722 - 52744879
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||  ||||||||||||||||||| ||||||| || |||||||||||||||||||||| |||||||||||| | |||||| ||||||||||||    
T  52744722 ggggaagtttcggagcaatccgatcaagtagtccgaaaacccaatttttgactaagaacaagtaacaatgacccaaaacagaaggatgagagttaggaag 52744821  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    |||||| |||| ||||||||| |||| ||||||||||| |||||||| || |||||||    
T  52744822 attaatgttgttcctaaaatgactatccatgttacaaacatgtttagcatttgtgctg 52744879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 120 - 277
Target Start/End: Complemental strand, 17000659 - 17000501
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataa-aaggataagagttaggaa 218  Q
    ||||||||||  ||||||||| |||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||    |||||| |||||||||||    
T  17000659 ggggaagtttcggagcaatccaatcaagtagcccgaaaattcgatttttgactaagaacaggtaacaatgacccaaaaacggaaggatgagagttaggaa 17000560  T
Q  219 gattaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    |||||||||||||||||||||| |||| ||||||||||| |||||||| || |||||||    
T  17000559 gattaatattgtccctaaaatgactatccatgttacaaacatgtttagaatttgtgctg 17000501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 120 - 277
Target Start/End: Original strand, 34162600 - 34162758
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataa-aaggataagagttaggaa 218  Q
    ||||||||||  |||||| || |||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||    ||||||| ||||||||||    
T  34162600 ggggaagtttcggagcaaaccaatcaagtagcccgaaaattcgatttttgactaagaacatgtaacaatgacccaaaaacggaaggataggagttaggaa 34162699  T
Q  219 gattaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||| || |||||||    
T  34162700 gattaatattgtccctaaaatggctatccatgttacaaacatgtttagaatttgtgctg 34162758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 132 - 277
Target Start/End: Original strand, 45046741 - 45046886
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    ||||||||||||||||||||||||||| ||| ||||| |||||||||| |||| |||||||||||| | |||||| ||||||||||||||||||||||||    
T  45046741 gagcaatccgatcaagtagcccgaaaacccggtttttaactaagaacaggtaacaatgacccaaaacagaaggatgagagttaggaagattaatattgtc 45046840  T
Q  232 cctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||| ||||| |||| ||||||||||| |||||||| || |||||||    
T  45046841 cctgaaatgactatccatgttacaaacatgtttagaatttgtgctg 45046886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 120 - 277
Target Start/End: Original strand, 45567769 - 45567926
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||  ||||||||||||||||||| ||||||| ||||||||| |||||||||| |||| |||||||||||| ||| |||| |||||||| |||    
T  45567769 ggggaagtttcggagcaatccgatcaagtagtccgaaaacccgattttttactaagaacaggtaacaatgacccaaaacaaatggatgagagttagaaag 45567868  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||||||||||||||||||||| |||| ||| ||||||| |||||||| || |||||||    
T  45567869 attaatattgtccctaaaatgactatccatattacaaacatgtttagaatttgtgctg 45567926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 132 - 265
Target Start/End: Original strand, 15069732 - 15069865
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||| |||||| | |||||| | |||||| |||||||||||||||    
T  15069732 gagcaatccgatcaagtagctcgaaaatccgatttttaactaagaacaagtaacaatgatccaaaacagaaggatgaaagttagtaagattaatattgtc 15069831  T
Q  232 cctaaaatggctatacatgttacaaatatgttta 265  Q
     |||||||| |||| ||||||||||| |||||||    
T  15069832 tctaaaatgactatccatgttacaaacatgttta 15069865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 132 - 266
Target Start/End: Complemental strand, 7011478 - 7011344
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||| || | ||||||| |||| | |||||| ||||||| ||||||||||||||||    
T  7011478 gagcaatccgatcaagtagcccgaaaacccgatttttgactaaaaacaggttacaatgacctaaaacagaaggatgagagttaagaagattaatattgtc 7011379  T
Q  232 cctaaaatggctatacatgttacaaatatgtttag 266  Q
    ||||||||| |||| ||||||| ||| ||||||||    
T  7011378 cctaaaatgactatccatgttagaaacatgtttag 7011344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 120 - 257
Target Start/End: Complemental strand, 34006541 - 34006403
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||  ||||||||||||||||||||||||||| |  ||||||||||||||||| |||  |||||| ||||||| |||||| ||||||||||||    
T  34006541 ggggaagtttcggagcaatccgatcaagtagcccgaaaacctaatttttgactaagaacaggtagcaatgacacaaaatagaaggatgagagttaggaag 34006442  T
Q  220 attaatattg-tccctaaaatggctatacatgttacaaa 257  Q
    |||||||||| ||||||||||| |||| |||||||||||    
T  34006441 attaatattgttccctaaaatgactatccatgttacaaa 34006403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 120 - 266
Target Start/End: Complemental strand, 49677763 - 49677617
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||  ||||||||||||||||||| | ||||| ||||||||| |||||||||| |||| |||||||||||| | ||| || ||||||||||||    
T  49677763 ggggaagtttcggagcaatccgatcaagtaggctgaaaacccgatttttaactaagaacatgtaacaatgacccaaaacataagaatgagagttaggaag 49677664  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttag 266  Q
    ||||||||||||||||||||| ||||  |||||||||| ||| ||||    
T  49677663 attaatattgtccctaaaatgactatctatgttacaaacatggttag 49677617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 120 - 265
Target Start/End: Original strand, 28866509 - 28866654
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||  ||||||||||||||||||| ||||||  |||||||||||||||||||| |||| |||| ||||||| | |||||| ||||||| ||||    
T  28866509 ggggaagtttcggagcaatccgatcaagtagtccgaaataccgatttttgactaagaacaggtaacaatgtcccaaaacagaaggatgagagttatgaag 28866608  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgttta 265  Q
    ||||| | ||||| |||||||||||| ||||||||||| |||||||    
T  28866609 attaaaaatgtccataaaatggctatccatgttacaaacatgttta 28866654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 122 - 257
Target Start/End: Original strand, 40650556 - 40650691
Alignment:
Q  122 ggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagat 221  Q
    ||||||||  |||||||||||||||||||||||||||  || ||||| |||||||||| |||| |||||||||||  | |||||| ||||||||||||||    
T  40650556 ggaagtttcggagcaatccgatcaagtagcccgaaaactcggtttttaactaagaacaggtaacaatgacccaaacgagaaggatgagagttaggaagat 40650655  T
Q  222 taatattgtccctaaaatggctatacatgttacaaa 257  Q
    |||||||||||||||||||  ||| |||||||||||    
T  40650656 taatattgtccctaaaatgattatccatgttacaaa 40650691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 120 - 277
Target Start/End: Original strand, 40907813 - 40907970
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||  ||||||||||||||||||| ||||||| ||||||||| ||||| |||| |||| |||||||||||  | || |||  |||||||||||    
T  40907813 ggggaagtttcggagcaatccgatcaagtagtccgaaaacccgattttttactaacaacaggtaacaatgacccaaagcagaaagatgggagttaggaag 40907912  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    |||||||||||| ||||||||  ||| ||||||||||| |||||||| || |||||||    
T  40907913 attaatattgtctctaaaatgattatccatgttacaaacatgtttagaatttgtgctg 40907970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 132 - 240
Target Start/End: Complemental strand, 38885481 - 38885373
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    ||||||||||||||||||||||||||| || |||||| ||||||||||||||| |||||||||||| | |||||| ||||||||||| ||||||||||||    
T  38885481 gagcaatccgatcaagtagcccgaaaacccaatttttaactaagaacaagtaacaatgacccaaaacagaaggatgagagttaggaaaattaatattgtc 38885382  T
Q  232 cctaaaatg 240  Q
    | |||||||    
T  38885381 cttaaaatg 38885373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 120 - 277
Target Start/End: Complemental strand, 42546248 - 42546090
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatcc-gatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaa 218  Q
    ||||||||||  ||||||||||||||||||||||||||| || | ||||| ||||||||||  ||| |||||||||||| | |||||| |||||||| |     
T  42546248 ggggaagtttcggagcaatccgatcaagtagcccgaaaaacccggtttttaactaagaacagataacaatgacccaaaacagaaggatgagagttagaat 42546149  T
Q  219 gattaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    |||||||||| || |||||||| |||| ||||||||||| |||||||| || |||||||    
T  42546148 gattaatattatctctaaaatgactatccatgttacaaacatgtttagaatttgtgctg 42546090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 122 - 265
Target Start/End: Complemental strand, 27795108 - 27794966
Alignment:
Q  122 ggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagat 221  Q
    ||||||||  |||||||||||||||||||||| |||| ||||| |||||||||||||| |||| |||||||||||| | || ||| | ||||||||||||    
T  27795108 ggaagtttcggagcaatccgatcaagtagcccaaaaacccgatgtttgactaagaacaggtaacaatgacccaaaacagaa-gatgatagttaggaagat 27795010  T
Q  222 taatattgtccctaaaatggctatacatgttacaaatatgttta 265  Q
    ||||||||||| ||||||| ||||  |||||| ||| |||||||    
T  27795009 taatattgtccataaaatgactatctatgttataaacatgttta 27794966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 121 - 263
Target Start/End: Original strand, 25563294 - 25563436
Alignment:
Q  121 gggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaaga 220  Q
    |||||||||  |||||||||||||||||||| |||| ||| ||||||||||||| ||||| ||| ||||||| |||| |||||||| || |||| ||||     
T  25563294 gggaagtttcggagcaatccgatcaagtagctcgaatatcggatttttgactaataacaactaacaatgacctaaaacaaaaggatgagggttatgaagc 25563393  T
Q  221 ttaatattgtccctaaaatggctatacatgttacaaatatgtt 263  Q
    |||||||||||| ||||||| |||| ||| ||||||| |||||    
T  25563394 ttaatattgtccttaaaatgactatccatattacaaacatgtt 25563436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 120 - 264
Target Start/End: Original strand, 26723367 - 26723511
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||  ||||||||||||||||||| || |||| ||||||||| ||||||||||  ||| |||||| ||||||| || ||| ||||| ||||||    
T  26723367 ggggaagtttcggagcaatccgatcaagtagtccaaaaacccgattttttactaagaacagataacaatgactcaaaatagaatgatcagagtaaggaag 26723466  T
Q  220 attaatattg-tccctaaaatggctatacatgttacaaatatgttt 264  Q
    |||||||||| ||||||||||| |||| ||||||||||| ||||||    
T  26723467 attaatattgttccctaaaatgactat-catgttacaaacatgttt 26723511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 165 - 265
Target Start/End: Original strand, 44573021 - 44573121
Alignment:
Q  165 ttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgttt 264  Q
    |||||||||||||||||||| ||||| |||||| | |||||| |||||||| |||||||||||||||||||||||| |||| ||||||||||| ||||||    
T  44573021 ttttgactaagaacaagtaacaatgatccaaaacagaaggatgagagttagaaagattaatattgtccctaaaatgactattcatgttacaaacatgttt 44573120  T
Q  265 a 265  Q
    |    
T  44573121 a 44573121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 124 - 257
Target Start/End: Original strand, 6223634 - 6223762
Alignment:
Q  124 aagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagatta 223  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||| |||| | ||| || | ||||||||     |    
T  6223634 aagtttcagagcaatccgatcaagtagcccgaaaacccgatttttgactaagaacatgtaacaatgacctaaaacagaagaatgatagttagga-----a 6223728  T
Q  224 atattgtccctaaaatggctatacatgttacaaa 257  Q
     |||||||||||||||| |||| |||||||||||    
T  6223729 ttattgtccctaaaatgactatccatgttacaaa 6223762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 187 - 277
Target Start/End: Original strand, 32817557 - 32817647
Alignment:
Q  187 atgacccaaaataaaaggataagagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||||||||||| | ||||||  |||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||| |||||||    
T  32817557 atgacccaaaacagaaggatgggagttaggaagattaatattgtccctaaaatgactatccatgttacaaacatgtttaggatttgtgctg 32817647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 120 - 265
Target Start/End: Original strand, 24472706 - 24472851
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||  ||||||||| ||||||| ||||  |||| |||||||||||||||||||  ||| ||||||| |||| | ||| || | ||||||||||    
T  24472706 ggggaagtttcggagcaatccaatcaagttgcccacaaattcgatttttgactaagaacagctaacaatgaccaaaaacagaagaatgatagttaggaag 24472805  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgttta 265  Q
     |||||||| ||| ||||||| |||| ||||||||||| |||||||    
T  24472806 cttaatattttccttaaaatgactatccatgttacaaacatgttta 24472851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 132 - 263
Target Start/End: Original strand, 3561226 - 3561357
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    |||||||| ||||||||| ||| || ||| ||||||||||||||||||| ||| ||||||| |||| | || ||| |||||||| |||||||||| ||||    
T  3561226 gagcaatctgatcaagtaacccaaagatcggatttttgactaagaacaactaacaatgacctaaaacagaatgatgagagttagaaagattaatactgtc 3561325  T
Q  232 cctaaaatggctatacatgttacaaatatgtt 263  Q
    | ||||||  ||||  |||||||||| |||||    
T  3561326 cttaaaattactatctatgttacaaacatgtt 3561357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 132 - 253
Target Start/End: Complemental strand, 42929152 - 42929031
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    |||||||| ||||||||||| |||||| | ||||||||||| ||||||| ||| ||||| | |||| | ||| || ||||||| ||| |||||||| |||    
T  42929152 gagcaatctgatcaagtagctcgaaaaccagatttttgactgagaacaactaacaatgatctaaaacataagaatgagagttaagaaaattaatatggtc 42929053  T
Q  232 cctaaaatggctatacatgtta 253  Q
    | ||||||||| ||||||||||    
T  42929052 cttaaaatggcaatacatgtta 42929031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 277
Target Start/End: Complemental strand, 32542563 - 32542516
Alignment:
Q  230 tccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    |||||| |||| |||||||||||||||||||||||||||| |||||||    
T  32542563 tccctagaatgactatacatgttacaaatatgtttaggatttgtgctg 32542516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 177
Target Start/End: Complemental strand, 890801 - 890748
Alignment:
Q  124 aagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaa 177  Q
    ||||||| |||||||| ||||||||| |||||||| | ||||||||||||||||    
T  890801 aagttttggagcaatctgatcaagtaacccgaaaaccagatttttgactaagaa 890748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 266
Target Start/End: Original strand, 9445846 - 9445911
Alignment:
Q  201 aaggataagagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtttag 266  Q
    |||||| ||||||||||||||||| ||| ||| ||||||| |||| |||| |||||| ||||||||    
T  9445846 aaggatgagagttaggaagattaacattctccttaaaatgactatccatgctacaaagatgtttag 9445911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 264
Target Start/End: Original strand, 800552 - 800615
Alignment:
Q  201 aaggataagagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgttt 264  Q
    |||||| ||||||||||| |||||||||||||  |||||| |||| |||| |||||| ||||||    
T  800552 aaggatgagagttaggaaaattaatattgtcctaaaaatgactatccatgctacaaacatgttt 800615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 227
Target Start/End: Original strand, 45880000 - 45880095
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatat 227  Q
    |||||||  ||||||||| ||| ||||   ||||||||||||| || || ||| ||||||| |||| | |||||| | ||||||||||||||||||    
T  45880000 gagcaatttgatcaagtatcccaaaaactagatttttgactaaaaaaaactaacaatgacctaaaacagaaggatgaaagttaggaagattaatat 45880095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 263
Target Start/End: Original strand, 43318940 - 43319002
Alignment:
Q  201 aaggataagagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtt 263  Q
    |||||| | ||||||||||||||||||||| | ||||||| ||||  |||||||||| |||||    
T  43318940 aaggatgaaagttaggaagattaatattgttcttaaaatgactatcaatgttacaaacatgtt 43319002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 263
Target Start/End: Original strand, 9446048 - 9446117
Alignment:
Q  194 aaaataaaaggataagagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtt 263  Q
    |||||| |||||| | || || ||||||||||||||||| ||||||| |||| ||||||| ||| |||||    
T  9446048 aaaatacaaggatgaaagctaagaagattaatattgtccttaaaatgactatccatgttataaacatgtt 9446117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 122; Significance: 1e-62; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 120 - 277
Target Start/End: Original strand, 31519771 - 31519928
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||| ||||||||| |||||||||||    
T  31519771 ggggaagtttcagagcaatccgatcaagtagcccgaaaacccgatttttgactaagaacaagtaacaatgaccaaaaacaaaaggatacgagttaggaag 31519870  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||    
T  31519871 attaatattgtccctaaaatggctatacatgttacaattatatttaggatttgtgctg 31519928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 123 - 269
Target Start/End: Complemental strand, 21004661 - 21004515
Alignment:
Q  123 gaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagatt 222  Q
    ||||||| ||||||||| |||||||||||| ||||| |||||||||||||||||||| |||| |||||||||||| |||||||||||||||| |||||||    
T  21004661 gaagtttcagagcaatctgatcaagtagccggaaaacccgatttttgactaagaacatgtaacaatgacccaaaacaaaaggataagagttatgaagatt 21004562  T
Q  223 aatattgtccctaaaatggctatacatgttacaaatatgtttaggat 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  21004561 aatattgtccctaaaatggctatacatgttacaaatatgtttaggat 21004515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 132 - 277
Target Start/End: Original strand, 8885344 - 8885489
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    ||||||||||||||||||| ||||||| ||||||||| |||||||||| |||| ||| |||||||| | |||||| ||||||||||||||||||||||||    
T  8885344 gagcaatccgatcaagtagtccgaaaacccgattttttactaagaacaggtaacaataacccaaaacagaaggatgagagttaggaagattaatattgtc 8885443  T
Q  232 cctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||||||||| |||| ||||||||||| |||||||| || |||||||    
T  8885444 cctaaaatgactatccatgttacaaacatgtttagaatttgtgctg 8885489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 136 - 265
Target Start/End: Original strand, 42280786 - 42280915
Alignment:
Q  136 aatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtcccta 235  Q
    ||||||||||||||| || ||||||||||||||||||||||||| |||| |||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  42280786 aatccgatcaagtagtccaaaaatccgatttttgactaagaacaggtaacaatgacccaaaacagaaggatgagagttaggaagattaatattgtcccta 42280885  T
Q  236 aaatggctatacatgttacaaatatgttta 265  Q
    ||||| |||| ||||||||||| |||||||    
T  42280886 aaatgactatgcatgttacaaacatgttta 42280915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 122 - 276
Target Start/End: Complemental strand, 9073782 - 9073628
Alignment:
Q  122 ggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagat 221  Q
    ||||||||  ||||||||| ||||||||| || |||| |||||||||||||||||||| |||| |||||||||||| | |||||| ||| ||||||||||    
T  9073782 ggaagtttcggagcaatccaatcaagtagtccaaaaacccgatttttgactaagaacaggtaacaatgacccaaaacataaggatgagacttaggaagat 9073683  T
Q  222 taatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgct 276  Q
    ||||||||||||||||||| |||| ||||||||||| |||||||| || ||||||    
T  9073682 taatattgtccctaaaatgactatccatgttacaaacatgtttagaatttgtgct 9073628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 132 - 277
Target Start/End: Complemental strand, 3094953 - 3094808
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    ||||||||||||||||||| |||||||  ||||||||||||||||||| |||| |||||||||||| | |||||| ||||||||||||||||||||||||    
T  3094953 gagcaatccgatcaagtagtccgaaaactcgatttttgactaagaacatgtaacaatgacccaaaacagaaggatgagagttaggaagattaatattgtc 3094854  T
Q  232 cctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    | |||||||  ||| ||||||||||| |||||||| || |||||||    
T  3094853 cataaaatgattatccatgttacaaacatgtttagaatttgtgctg 3094808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 120 - 277
Target Start/End: Original strand, 27927820 - 27927977
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||  |||||||| |||||||||| ||||||| || |||||| |||||||||| |||| |||||||||||| | |||||| ||||||||||||    
T  27927820 ggggaagtttcggagcaatctgatcaagtagtccgaaaacccaatttttaactaagaacaggtaacaatgacccaaaacagaaggatgagagttaggaag 27927919  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    |||||||||||| |||||||| |||| ||||||||||| |||||||| || |||||||    
T  27927920 attaatattgtctctaaaatgactatccatgttacaaacatgtttagaatttgtgctg 27927977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 120 - 277
Target Start/End: Complemental strand, 44106503 - 44106346
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    |||||||||| ||||||||| ||||||||||| |||||| |||||||||||||||||||| |||| |||||| ||||| | |||||| ||||||||||||    
T  44106503 ggggaagtttcagagcaatcagatcaagtagcacgaaaacccgatttttgactaagaacaggtaacaatgactcaaaacagaaggatgagagttaggaag 44106404  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||||||||||||| |  |||| |||| ||||||||||| |||||||| || |||||||    
T  44106403 attaatattgtccatggaatgactatccatgttacaaacatgtttagaatttgtgctg 44106346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 120 - 277
Target Start/End: Complemental strand, 34853608 - 34853451
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||  ||||||||||||||||||  |||||||  |||||| || ||||||||| |||| |||||||||||| | |||||| ||||||||||||    
T  34853608 ggggaagtttcggagcaatccgatcaagtaatccgaaaactcgatttctgcctaagaacaggtaacaatgacccaaaacagaaggatgagagttaggaag 34853509  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||||||||||||||||||||| |||| ||||||||||| || ||||| || |||||||    
T  34853508 attaatattgtccctaaaatgactatccatgttacaaacatttttagaatttgtgctg 34853451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 122 - 263
Target Start/End: Complemental strand, 36980847 - 36980706
Alignment:
Q  122 ggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagat 221  Q
    ||||||||  ||||||||||||||||||||||||||||| |||||||||||||||| |  ||| |||||||||||||| ||||||||||||||| |||||    
T  36980847 ggaagtttcggagcaatccgatcaagtagcccgaaaatcggatttttgactaagaatagctaacaatgacccaaaatagaaggataagagttagaaagat 36980748  T
Q  222 taatattgtccctaaaatggctatacatgttacaaatatgtt 263  Q
     |||||||||| |||||||  ||| ||||||||||| |||||    
T  36980747 caatattgtccttaaaatgattatccatgttacaaacatgtt 36980706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 121 - 266
Target Start/End: Complemental strand, 40328176 - 40328031
Alignment:
Q  121 gggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaaga 220  Q
    |||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||| |||| ||| |||||||| | || ||| |||||||||||||    
T  40328176 gggaagttttggagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaataacccaaaacagaaagatgagagttaggaaga 40328077  T
Q  221 ttaatattgtccctaaaatggctatacatgttacaaatatgtttag 266  Q
    |||||||| ||| ||||||| | || ||||||||||| ||||||||    
T  40328076 ttaatattatccataaaatgacaatccatgttacaaacatgtttag 40328031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 121 - 277
Target Start/End: Complemental strand, 40392815 - 40392659
Alignment:
Q  121 gggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaaga 220  Q
    |||||||||  ||| ||||||||||||||||  |||||   ||||||||||||||||||| ||| |||||||||||  | || |||||||||||||||||    
T  40392815 gggaagtttcggagaaatccgatcaagtagcttgaaaacttgatttttgactaagaacaactaacaatgacccaaatcataaagataagagttaggaaga 40392716  T
Q  221 ttaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    |||||||||||| ||||||| |||| ||||||||||| |||||||| || |||||||    
T  40392715 ttaatattgtccataaaatgactatccatgttacaaacatgtttagaatttgtgctg 40392659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 120 - 266
Target Start/End: Original strand, 11698195 - 11698341
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||  ||||| ||||||||||||||||||||| ||||||||||||||||||||  ||| ||||||| ||||   |||||| ||||||||||||    
T  11698195 ggggaagtttcggagcattccgatcaagtagcccgaaaacccgatttttgactaagaacagataacaatgaccaaaaacggaaggatgagagttaggaag 11698294  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttag 266  Q
    ||||||||| ||||||||||| |||| ||||||| ||| ||| ||||    
T  11698295 attaatattatccctaaaatgactatccatgttaaaaacatgcttag 11698341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 132 - 277
Target Start/End: Original strand, 14163948 - 14164093
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    |||||| ||||||||||| ||||||||  |  |||||||||||||||| |||| ||||||| |||| | |||||| ||||||||||| ||||||||||||    
T  14163948 gagcaaaccgatcaagtaccccgaaaacgcagtttttgactaagaacaggtaacaatgaccaaaaacagaaggatgagagttaggaaaattaatattgtc 14164047  T
Q  232 cctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||||||||| |||| ||||||||||| |||||||| || |||||||    
T  14164048 cctaaaatgactatccatgttacaaacatgtttagaatttgtgctg 14164093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 120 - 277
Target Start/End: Original strand, 17119758 - 17119915
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||  ||| ||||| ||||||||| ||||||| ||| |||||||||||||||| |||| ||||| |||||| | |||||| ||||||||||||    
T  17119758 ggggaagtttcggagaaatccaatcaagtagtccgaaaacccggtttttgactaagaacaggtaacaatgatccaaaacagaaggatgagagttaggaag 17119857  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||||||||||||| ||||||| | || ||||||||||| || ||||| || |||||||    
T  17119858 attaatattgtccgtaaaatgacaatccatgttacaaacatatttagaatttgtgctg 17119915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 120 - 277
Target Start/End: Complemental strand, 28917055 - 28916898
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttg-actaagaacaagtaagaatgacccaaaataaaaggataagagttaggaa 218  Q
    ||||||||||  ||||||||||||||||||| | ||||| |||||||||  || ||||||| |||| |||||||||||| | |||||| |||||||| ||    
T  28917055 ggggaagtttcggagcaatccgatcaagtagtc-gaaaacccgatttttttaccaagaacatgtaacaatgacccaaaacagaaggatgagagttagaaa 28916957  T
Q  219 gattaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    |||||||||||||||||||||| |||| ||||| ||||| |||||||| || |||||||    
T  28916956 gattaatattgtccctaaaatgactatccatgtaacaaacatgtttagaatttgtgctg 28916898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 120 - 265
Target Start/End: Original strand, 36165716 - 36165862
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatcc-gatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaa 218  Q
    ||||||||||  |||||||||||||||||||||| |||| || | ||||| |||||||||| |||| |||||||||||| | |||||| ||||||| |||    
T  36165716 ggggaagtttcggagcaatccgatcaagtagcccaaaaaacccggtttttaactaagaacatgtaacaatgacccaaaacagaaggatgagagttaagaa 36165815  T
Q  219 gattaatattgtccctaaaatggctatacatgttacaaatatgttta 265  Q
    ||||||||||||| |||||||  |||| ||||||||||| |||||||    
T  36165816 gattaatattgtctctaaaataactatccatgttacaaacatgttta 36165862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 133 - 265
Target Start/End: Complemental strand, 1076822 - 1076690
Alignment:
Q  133 agcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtcc 232  Q
    |||||||| ||||||||||||||||||| |||||||||| |||||||| ||| |||||  ||||| |||| ||| |||| || |||||||||||||||||    
T  1076822 agcaatccaatcaagtagcccgaaaatcagatttttgaccaagaacaactaacaatgatgcaaaacaaaatgatgagagctatgaagattaatattgtcc 1076723  T
Q  233 ctaaaatggctatacatgttacaaatatgttta 265  Q
     |||||||| ||| ||||||||||| |||||||    
T  1076722 ataaaatggatattcatgttacaaacatgttta 1076690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 124 - 258
Target Start/End: Complemental strand, 36318072 - 36317938
Alignment:
Q  124 aagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagatta 223  Q
    ||||||| || | ||||||||||||||||||||||||  |||| ||||||||||||  ||| |||||||||||||  || |||||||||||| |||||||    
T  36318072 aagttttggaactatccgatcaagtagcccgaaaatcgaatttctgactaagaacagctaacaatgacccaaaattgaaagataagagttagaaagatta 36317973  T
Q  224 atattgtccctaaaatggctatacatgttacaaat 258  Q
    ||||||||| |||||||  ||| ||||||||||||    
T  36317972 atattgtccttaaaatgattatccatgttacaaat 36317938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 136 - 266
Target Start/End: Complemental strand, 28423684 - 28423555
Alignment:
Q  136 aatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtcccta 235  Q
    ||||||||||||||||||||||| |  |||||||||||||||||| ||  |||||| ||||||| |||||| ||||||||||||||||||||||||  ||    
T  28423684 aatccgatcaagtagcccgaaaaactaatttttgactaagaacaactac-aatgacgcaaaatagaaggatgagagttaggaagattaatattgtctgta 28423586  T
Q  236 aaatggctatacatgttacaaatatgtttag 266  Q
    |||||   || ||||||||||| ||||||||    
T  28423585 aaatgttcatccatgttacaaacatgtttag 28423555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 120 - 257
Target Start/End: Complemental strand, 6395364 - 6395227
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||| |||| ||| |||||||||||||||||||||||||| |||||||||||| |||||  ||| ||||||| |||| | ||| || ||||||||||||    
T  6395364 ggggatgtttcagaacaatccgatcaagtagcccgaaaatcagatttttgactacgaacagctaacaatgacctaaaacagaagaatgagagttaggaag 6395265  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaa 257  Q
     |||||||||||| |||||||  ||| |||| ||||||    
T  6395264 tttaatattgtccataaaatgaatatccatgctacaaa 6395227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 277
Target Start/End: Original strand, 4259528 - 4259671
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    |||||| |||||| ||||||||||||| | || |||||||||||||||| ||| ||||| | |||| ||  |||| | ||||||||||||||||||||||    
T  4259528 gagcaagccgatctagtagcccgaaaaccagagttttgactaagaacaactaacaatgatcgaaaagaa--ggatgatagttaggaagattaatattgtc 4259625  T
Q  232 cctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    | ||||||| ||||  |||||||||| ||| |||| || |||||||    
T  4259626 cataaaatgactatcaatgttacaaacatgcttagaatttgtgctg 4259671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 277
Target Start/End: Complemental strand, 16310791 - 16310722
Alignment:
Q  208 agagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||| || |||||||    
T  16310791 agagttaggaagattaatattgtccctaaaatgactattcatgttacaaacatgtttagaatttgtgctg 16310722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 132 - 257
Target Start/End: Complemental strand, 34645645 - 34645520
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    |||||||  |||||||||||||||||| | ||| |||||||||||||| |||| ||||| |||||| | |||||| |||||||| || ||||| ||| ||    
T  34645645 gagcaatgtgatcaagtagcccgaaaaccggatgtttgactaagaacatgtaacaatgatccaaaacagaaggatgagagttagaaaaattaaaattatc 34645546  T
Q  232 cctaaaatggctatacatgttacaaa 257  Q
    | ||||||| ||||  ||||||||||    
T  34645545 cttaaaatgactatctatgttacaaa 34645520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 209 - 277
Target Start/End: Complemental strand, 40994983 - 40994915
Alignment:
Q  209 gagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||| || |||||||    
T  40994983 gagttaggaagattaatattgtccctaaaatgactatccatgttacaaacatgtttagaatttgtgctg 40994915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 132 - 254
Target Start/End: Original strand, 8621528 - 8621652
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataa--aaggataagagttaggaagattaatattg 229  Q
    |||||||||||||||||||| | |||||  ||||||||||||||||||| ||| ||||||| ||||| |  |   ||||||||||| ||||||||||||     
T  8621528 gagcaatccgatcaagtagctcaaaaattggatttttgactaagaacaactaacaatgacctaaaatgattatccataagagttagaaagattaatatta 8621627  T
Q  230 tccctaaaatggctatacatgttac 254  Q
    ||| |||||||  ||| ||||||||    
T  8621628 tccttaaaatgattatccatgttac 8621652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 277
Target Start/End: Complemental strand, 37248750 - 37248681
Alignment:
Q  208 agagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||||||||||||||||||||||||||||||||| |||| ||||| ||||| |||||||| || |||||||    
T  37248750 agagttaggaagattaatattgtccctaaaatgactatccatgtaacaaacatgtttagaatttgtgctg 37248681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 263
Target Start/End: Original strand, 31234486 - 31234540
Alignment:
Q  209 gagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtt 263  Q
    |||||||||||||||||||||||| ||||||| |||| |||||||||||||||||    
T  31234486 gagttaggaagattaatattgtccttaaaatgactatccatgttacaaatatgtt 31234540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 263
Target Start/End: Complemental strand, 33472270 - 33472208
Alignment:
Q  201 aaggataagagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtt 263  Q
    |||||| ||||||||||||||||||||||||| ||||||| |||| ||||||||||| |||||    
T  33472270 aaggatgagagttaggaagattaatattgtccttaaaatgactatccatgttacaaacatgtt 33472208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 194 - 263
Target Start/End: Complemental strand, 9845392 - 9845323
Alignment:
Q  194 aaaataaaaggataagagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtt 263  Q
    |||||| |||||  ||||||||||||||||||||||||| ||||||| |||| ||||||||||| |||||    
T  9845392 aaaatataaggacgagagttaggaagattaatattgtccttaaaatgactatccatgttacaaacatgtt 9845323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 194 - 263
Target Start/End: Original strand, 10833468 - 10833537
Alignment:
Q  194 aaaataaaaggataagagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtt 263  Q
    |||| |||||||| | ||||||||||||||||||||||| ||||||| |||| ||||||||||| |||||    
T  10833468 aaaacaaaaggatgaaagttaggaagattaatattgtccttaaaatgactatccatgttacaaacatgtt 10833537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 263
Target Start/End: Complemental strand, 7981781 - 7981651
Alignment:
Q  133 agcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtcc 232  Q
    |||||||||||||||||||| ||||||   |||||| | ||| ||||| ||| ||| |||||||| | |||||| || ||||||||  |||| |||||||    
T  7981781 agcaatccgatcaagtagcctgaaaattgcatttttaattaataacaactaacaataacccaaaacagaaggatgagggttaggaaacttaacattgtcc 7981682  T
Q  233 ctaaaatggctatacatgttacaaatatgtt 263  Q
     ||||||   ||| ||||||||||| |||||    
T  7981681 ttaaaataaatatccatgttacaaacatgtt 7981651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 263
Target Start/End: Complemental strand, 33472477 - 33472415
Alignment:
Q  201 aaggataagagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtt 263  Q
    |||||| | ||||||||||||||||||||||| ||||||| |||| ||||||||||| |||||    
T  33472477 aaggatgatagttaggaagattaatattgtccttaaaatgactatccatgttacaaacatgtt 33472415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 10840717 - 10840773
Alignment:
Q  201 aaggataagagttaggaagattaatattgtccctaaaatggctatacatgttacaaa 257  Q
    |||||| ||||||||||||||||||||||||| || | ||| ||| |||||||||||    
T  10840717 aaggatgagagttaggaagattaatattgtccttacactggttatccatgttacaaa 10840773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 24627761 - 24627717
Alignment:
Q  213 taggaagattaatattgtccctaaaatggctatacatgttacaaa 257  Q
    |||||||||||||||||||| ||||||| |||| |||||||||||    
T  24627761 taggaagattaatattgtccttaaaatgactatccatgttacaaa 24627717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 263
Target Start/End: Complemental strand, 7982570 - 7982515
Alignment:
Q  208 agagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtt 263  Q
    |||||| |||||||||||||||||| ||||||| ||||  |||||||||| |||||    
T  7982570 agagttgggaagattaatattgtccttaaaatgactatttatgttacaaacatgtt 7982515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 41530862 - 41530812
Alignment:
Q  213 taggaagattaatattgtccctaaaatggctatacatgttacaaatatgtt 263  Q
    |||||||||||||||||||| | ||||| |||| ||||||||||| |||||    
T  41530862 taggaagattaatattgtccttgaaatgactatccatgttacaaacatgtt 41530812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 257
Target Start/End: Complemental strand, 39093760 - 39093651
Alignment:
Q  148 tagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtccctaaaatggctatac 247  Q
    |||||||||||||  |||||| ||||||||||| ||| ||||||| |||| | || ||| ||| || | ||||||||||| |||  |||| ||| |||      
T  39093760 tagcccgaaaatcatattttttactaagaacaattaacaatgacctaaaacataaagatgagactttgaaagattaatatggtcattaaactggttatgt 39093661  T
Q  248 atgttacaaa 257  Q
    ||||||||||    
T  39093660 atgttacaaa 39093651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 122; Significance: 1e-62; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 120 - 277
Target Start/End: Original strand, 43472848 - 43473005
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    |||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||  ||| |||||||||||| |||||||||||||||||||||    
T  43472848 ggggaagtttcagagtaatccgatcaagtagcccgaaaacccgatttttgactaagaacagataacaatgacccaaaacaaaaggataagagttaggaag 43472947  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  43472948 attaatattgtccttaaaatggctatacatgttacaaatatgtttaggatttgtgctg 43473005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 120 - 277
Target Start/End: Complemental strand, 52777511 - 52777354
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||  |||||||||||| |||||||||||||||| ||||    
T  52777511 ggggaagtttcagagcaatccgatcaagtagcccgaaaacccgatttttgactaagaacatgtagcaatgacccaaaacaaaaggataagagttaagaag 52777412  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| || |||||||    
T  52777411 attaatattgtccctaaaatggctatacatgttacaaacatgtttagaatttgtgctg 52777354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 120 - 269
Target Start/End: Original strand, 2358501 - 2358650
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    |||||||||| |||||||| |||||||||||||| |||| |||||||||||||||||| | | || |||||||||||| |||||||||||||||||||||    
T  2358501 ggggaagtttcagagcaattcgatcaagtagcccaaaaacccgatttttgactaagaatatgcaacaatgacccaaaacaaaaggataagagttaggaag 2358600  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttaggat 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2358601 attaatattgtccctaaaatggctatacatgttacaaatatgtttaggat 2358650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 124 - 277
Target Start/End: Complemental strand, 47302294 - 47302143
Alignment:
Q  124 aagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagatta 223  Q
    |||||| ||| ||||||||||||||||||||||||  ||||||||||||||||||| |||| |||||||||||| |||||||||||||||| ||| ||||    
T  47302294 aagtttcagaacaatccgatcaagtagcccgaaaactcgatttttgactaagaacatgtaacaatgacccaaaacaaaaggataagagtta-gaatatta 47302196  T
Q  224 atattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  47302195 atattgt-cctaaaatggctatacatgttacaaatatgtttaggatttgtgctg 47302143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 120 - 277
Target Start/End: Complemental strand, 50716533 - 50716375
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataa-aaggataagagttaggaa 218  Q
    ||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    || ||| |||||||||||    
T  50716533 ggggaagtttcggagcaatccgatcaagtagcccgaaaacccgatttttgactaagaacaagtaacaatgacccaaaaacggaatgatgagagttaggaa 50716434  T
Q  219 gattaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    |||||||||||||||||||||| |||| ||||||||||| |||||||| || |||||||    
T  50716433 gattaatattgtccctaaaatgactattcatgttacaaacatgtttagaatttgtgctg 50716375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 120 - 277
Target Start/End: Original strand, 50796314 - 50796472
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataa-aaggataagagttaggaa 218  Q
    ||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    || ||| |||||||||||    
T  50796314 ggggaagtttcggagcaatccgatcaagtagcccgaaaacccgatttttgactaagaacaagtaacaatgacccaaaaacggaatgatgagagttaggaa 50796413  T
Q  219 gattaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    |||||||||||||||||||||| |||| ||||||||||| |||||||| || |||||||    
T  50796414 gattaatattgtccctaaaatgactattcatgttacaaacatgtttagaatttgtgctg 50796472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 132 - 277
Target Start/End: Complemental strand, 47123294 - 47123149
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    |||||||||||||||||||||||||||| || ||||| |||||||||| |||| |||| ||||||| | |||||| ||||||||||||||||||||||||    
T  47123294 gagcaatccgatcaagtagcccgaaaattcggtttttaactaagaacaggtaacaatggcccaaaacagaaggatgagagttaggaagattaatattgtc 47123195  T
Q  232 cctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    |||||||||  ||| ||||||||||| |||||||| || |||||||    
T  47123194 cctaaaatgattatccatgttacaaacatgtttagaatttgtgctg 47123149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 121 - 277
Target Start/End: Original strand, 3351946 - 3352102
Alignment:
Q  121 gggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaaga 220  Q
    |||||||||  ||||||||||||||||||||| ||||| || |||||| |||||||||  |||| |||||||||||| | ||| || |||||||||||||    
T  3351946 gggaagtttcggagcaatccgatcaagtagcctgaaaaccctattttttactaagaaccggtaacaatgacccaaaacagaagaatgagagttaggaaga 3352045  T
Q  221 ttaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    |||||||||||||||||||| |||| ||||||||||| |||||||| || |||||||    
T  3352046 ttaatattgtccctaaaatgactatccatgttacaaacatgtttagaatttgtgctg 3352102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 132 - 252
Target Start/End: Original strand, 46622686 - 46622806
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| | ||| || ||||| ||||||||||||||||||    
T  46622686 gagcaatccgatcaagtagtccgaaaatccgatttttgactaagaacaagtaacaatgacccaaaacagaagaatgagagtaaggaagattaatattgtc 46622785  T
Q  232 cctaaaatggctatacatgtt 252  Q
    ||||||||| |||| ||||||    
T  46622786 cctaaaatgactatccatgtt 46622806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 120 - 277
Target Start/End: Complemental strand, 28873286 - 28873128
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaa-taaaaggataagagttaggaa 218  Q
    ||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||    ||| || ||||||| |||    
T  28873286 ggggaagtttcggagcaatccgatcaagtagcccgaaaacccgatttttgactaagaacaagtaacagtgacccaaaagcggaagaatgagagttaagaa 28873187  T
Q  219 gattaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    |||||||||||||||||||||| ||||  |||||||||| |||||||| || |||||||    
T  28873186 gattaatattgtccctaaaatgactatctatgttacaaacatgtttagaatttgtgctg 28873128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 120 - 265
Target Start/End: Original strand, 38977627 - 38977772
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||| |||||||||||||||||||| ||||||  || ||||| |||||| ||| |||| |||||||||||| | |||||| ||||||||||||    
T  38977627 ggggaagttttggagcaatccgatcaagtagctcgaaaactcggtttttaactaaggacaggtaacaatgacccaaaacagaaggatgagagttaggaag 38977726  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgttta 265  Q
    ||||||||||||| ||||||| |||| ||||||||||| |||||||    
T  38977727 attaatattgtccataaaatgactatccatgttacaaacatgttta 38977772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 132 - 277
Target Start/End: Complemental strand, 47130660 - 47130515
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    |||||||||||||||||||||||||||| || ||||| |||||||||| |||| |||| ||||||| | |||||| ||||||||||||||||||||||||    
T  47130660 gagcaatccgatcaagtagcccgaaaattcggtttttaactaagaacaggtaacaatggcccaaaacagaaggatgagagttaggaagattaatattgtc 47130561  T
Q  232 cctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    |||||||||  | | ||||||||||| |||||||| || |||||||    
T  47130560 cctaaaatgattgtccatgttacaaacatgtttagaatttgtgctg 47130515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 121 - 277
Target Start/End: Complemental strand, 35142353 - 35142197
Alignment:
Q  121 gggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaaga 220  Q
    |||||||||  ||||||||||||||||||||||||||| ||  ||||||||||||||||  ||| |||||||||||  | |||||| |||||||||||||    
T  35142353 gggaagtttcggagcaatccgatcaagtagcccgaaaacccagtttttgactaagaacagataacaatgacccaaagcagaaggatgagagttaggaaga 35142254  T
Q  221 ttaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    |||||||||||  ||||||| |||| ||||||||||| |||||||| || |||||||    
T  35142253 ttaatattgtctttaaaatgactatccatgttacaaacatgtttagaatttgtgctg 35142197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 120 - 265
Target Start/End: Original strand, 49096105 - 49096251
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||| |||||||||||||||||||||||||||  ||||||||||| ||||||| |||| |||||| ||||| | |||||| ||||||||||||    
T  49096105 ggggaagttttggagcaatccgatcaagtagcccgaaaactcgatttttgacgaagaacaggtaacaatgactcaaaacagaaggatgagagttaggaag 49096204  T
Q  220 attaatattg-tccctaaaatggctatacatgttacaaatatgttta 265  Q
    ||| |||||| ||||||||||| ||||  |||||||||| |||||||    
T  49096205 atttatattgttccctaaaatgactatctatgttacaaacatgttta 49096251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 120 - 225
Target Start/End: Complemental strand, 3938462 - 3938357
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    |||||||||| ||||||||||||||||||| |||||||| | |||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||    
T  3938462 ggggaagtttcagagcaatccgatcaagtaacccgaaaaccagatttttgactaagaacaggtaacaatgacccaaaacaaaaggataagagttaggaag 3938363  T
Q  220 attaat 225  Q
    ||||||    
T  3938362 attaat 3938357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 120 - 277
Target Start/End: Original strand, 34821222 - 34821379
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    |||||||||| ||||| |||||||||||||||| ||||| ||| ||||| |||||||||| |||| |||||||||||| | |||||| | | ||||||||    
T  34821222 ggggaagtttcagagcgatccgatcaagtagcctgaaaacccgctttttaactaagaacaggtaacaatgacccaaaacagaaggatgaaatttaggaag 34821321  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||||||||||||| ||||||| ||||  |||||||||| |||||||| || |||||||    
T  34821322 attaatattgtccataaaatgactatctatgttacaaacatgtttagaatttgtgctg 34821379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 120 - 277
Target Start/End: Original strand, 47739812 - 47739968
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||| ||||||||||||||||||||||||||| || |||||| ||||| | || |||| ||||||| |||| | |||||| ||||||| ||||    
T  47739812 ggggaagttttggagcaatccgatcaagtagcccgaaaacccaatttttaactaaaaccaggtaataatgacc-aaaacagaaggatgagagttatgaag 47739910  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||||||||||||||| ||||| ||||  |||||||||| |||||||| || |||||||    
T  47739911 attaatattgtcccttaaatgactatctatgttacaaacatgtttagaatttgtgctg 47739968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 132 - 276
Target Start/End: Original strand, 501032 - 501176
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    |||||||||||||||||||||||||||   ||||||||| ||| |||| |||| |||||||||||| | |||||| |||| |||||||||||||||||||    
T  501032 gagcaatccgatcaagtagcccgaaaacatgatttttgaataaaaacatgtaacaatgacccaaaacagaaggatgagagctaggaagattaatattgtc 501131  T
Q  232 cctaaaatggctatacatgttacaaatatgtttaggatctgtgct 276  Q
    | ||||||| |||| ||| ||||||| |||||||| || ||||||    
T  501132 cataaaatgactatccattttacaaacatgtttagaatttgtgct 501176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 121 - 240
Target Start/End: Original strand, 30721690 - 30721809
Alignment:
Q  121 gggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaaga 220  Q
    |||||||||  |||||||||||||||||||| |||||| || |||||||||||| |||  |||  |||||||||||| | ||||||||||||||||||||    
T  30721690 gggaagtttcggagcaatccgatcaagtagctcgaaaacccaatttttgactaataacgggtatcaatgacccaaaacagaaggataagagttaggaaga 30721789  T
Q  221 ttaatattgtccctaaaatg 240  Q
    ||||||||||||||||||||    
T  30721790 ttaatattgtccctaaaatg 30721809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 120 - 263
Target Start/End: Original strand, 35345788 - 35345931
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||  ||||||||||||||| || |||||||| || |||||||||||||||||| ||| ||||||  |||| |||||||| |||||||| ||     
T  35345788 ggggaagtttcggagcaatccgatcaattaacccgaaaacccaatttttgactaagaacaactaacaatgacgaaaaacaaaaggatgagagttagaaat 35345887  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtt 263  Q
    ||||||||||||| ||||||| |||| ||||||||||| |||||    
T  35345888 attaatattgtccataaaatgactatccatgttacaaacatgtt 35345931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 132 - 265
Target Start/End: Complemental strand, 51258672 - 51258538
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattg-t 230  Q
    ||||||||||||||||| | |||||||  ||||||||||||||||||| |||| |||||| ||||| |||||||| ||||||| |||||||||||||| |    
T  51258672 gagcaatccgatcaagttgtccgaaaactcgatttttgactaagaacatgtaacaatgactcaaaacaaaaggatgagagttatgaagattaatattgtt 51258573  T
Q  231 ccctaaaatggctatacatgttacaaatatgttta 265  Q
    |||||||||| |||| ||||||| ||| |||||||    
T  51258572 ccctaaaatgactatccatgttataaacatgttta 51258538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 132 - 277
Target Start/End: Original strand, 3902697 - 3902842
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    ||||||||||||||||||  | ||||| |||||||||||||||||||| |||| |||||||||||  | |||||| ||||||| ||||||||||||||||    
T  3902697 gagcaatccgatcaagtaatctgaaaacccgatttttgactaagaacatgtaacaatgacccaaagcagaaggatgagagttatgaagattaatattgtc 3902796  T
Q  232 cctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    | |||||||   || ||||||||||| |||||||| || |||||||    
T  3902797 cataaaatgatcatccatgttacaaacatgtttagaatttgtgctg 3902842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 132 - 257
Target Start/End: Complemental strand, 46624988 - 46624863
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    ||||||| ||||||||||| || |||||  ||||||||||||| ||||| ||| |||||||||||| | |||||| ||||||||||||||||||||| ||    
T  46624988 gagcaattcgatcaagtagtccaaaaattagatttttgactaataacaactaataatgacccaaaacagaaggatgagagttaggaagattaatattttc 46624889  T
Q  232 cctaaaatggctatacatgttacaaa 257  Q
    | ||||||| ||||||||||||||||    
T  46624888 cataaaatgactatacatgttacaaa 46624863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 152 - 277
Target Start/End: Original strand, 51540525 - 51540650
Alignment:
Q  152 ccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtccctaaaatggctatacatgt 251  Q
    ||||||| |||||||||||||||||||  |||| |||||||||||  | |||||| ||||||||||||||||||||||||||||||||| |||| || ||    
T  51540525 ccgaaaacccgatttttgactaagaacgtgtaacaatgacccaaaggagaaggatgagagttaggaagattaatattgtccctaaaatgactatccaagt 51540624  T
Q  252 tacaaatatgtttaggatctgtgctg 277  Q
    |||||| |||||||| || |||||||    
T  51540625 tacaaacatgtttagaatttgtgctg 51540650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 120 - 265
Target Start/End: Complemental strand, 39150089 - 39149944
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||  ||||||| ||| ||||||||||||||| ||| ||||| |||||||||| |||| | |||||||||| | |||||| |||||||||||     
T  39150089 ggggaagtttcggagcaattcgaccaagtagcccgaaaacccggtttttaactaagaacatgtaacagtgacccaaaacagaaggatgagagttaggaaa 39149990  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgttta 265  Q
    |||||||||||| |||||||| |||   |||||||||| |||||||    
T  39149989 attaatattgtctctaaaatgactaccaatgttacaaacatgttta 39149944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 124 - 265
Target Start/End: Original strand, 5127782 - 5127923
Alignment:
Q  124 aagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagatta 223  Q
    |||||| | |||||| | ||||||||| ||||||| | |||||||||| |||||||| ||| |||||| ||||| ||| |||| |||| || ||||||||    
T  5127782 aagtttcaaagcaattcaatcaagtagtccgaaaaccagatttttgaccaagaacaactaacaatgacgcaaaacaaatggatgagagctatgaagatta 5127881  T
Q  224 atattgtccctaaaatggctatacatgttacaaatatgttta 265  Q
    ||||||||| |||||||| ||| ||||||||||| |||||||    
T  5127882 atattgtccataaaatggatatccatgttacaaacatgttta 5127923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 134 - 257
Target Start/End: Complemental strand, 40062645 - 40062522
Alignment:
Q  134 gcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtccc 233  Q
    |||||| |||||||||||||||||| | ||||||||||||||||||| ||| ||||||| |||| |||||||  |||||||||||||||||||| |||      
T  40062645 gcaatctgatcaagtagcccgaaaaccagatttttgactaagaacaactaataatgacctaaaacaaaaggaccagagttaggaagattaatatggtctt 40062546  T
Q  234 taaaatggctatacatgttacaaa 257  Q
    |||| | | ||| |||||||||||    
T  40062545 taaactagttatccatgttacaaa 40062522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 120 - 276
Target Start/End: Complemental strand, 51493080 - 51492923
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttg-actaagaacaagtaagaatgacccaaaataaaaggataagagttaggaa 218  Q
    ||||||||||  |||||||| |||||||||| || |||| || ||||||  ||||||||||  ||| ||||||| |||| | |||||| |||||||||||    
T  51493080 ggggaagtttcggagcaatctgatcaagtaggccaaaaacccaatttttttactaagaacagctaacaatgaccaaaaacataaggatgagagttaggaa 51492981  T
Q  219 gattaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgct 276  Q
    |||||||||||||| ||||||  |||| ||| ||||||| ||| |||| || ||||||    
T  51492980 gattaatattgtccataaaataactattcatattacaaacatgattagaatttgtgct 51492923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 190 - 277
Target Start/End: Complemental strand, 33438731 - 33438644
Alignment:
Q  190 acccaaaataaaaggataagagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    |||||||| | |||||| ||||||||||||||||||||||||||||||||| |||| ||| ||||||| |||||||| || |||||||    
T  33438731 acccaaaacagaaggatgagagttaggaagattaatattgtccctaaaatgactatccatattacaaacatgtttagaatttgtgctg 33438644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 216 - 277
Target Start/End: Complemental strand, 3937563 - 3937502
Alignment:
Q  216 gaagattaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||    
T  3937563 gaagattaatattgtccataaaatggttatacatgttacaaatatgtttaggatttgtgctg 3937502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 239
Target Start/End: Complemental strand, 29048610 - 29048503
Alignment:
Q  133 agcaatccgatcaagtagcccgaaaatccgatttttg-actaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    |||||||||||||||||||| ||||| | |||||||  ||||||||||  ||| ||||||| |||| | |||||||||||||| ||||||||||||| ||    
T  29048610 agcaatccgatcaagtagcctgaaaaccagatttttatactaagaacagttaacaatgacctaaaacataaggataagagttatgaagattaatattatc 29048511  T
Q  232 cctaaaat 239  Q
    | ||||||    
T  29048510 cttaaaat 29048503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 120 - 237
Target Start/End: Original strand, 4300159 - 4300276
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||||||||||||  |||||  ||||| ||||   ||||||| ||||||||||  ||| ||||||| || | |||||||| | ||||||||||    
T  4300159 ggggaagttttagagcaatctaatcaataagcccaaaaactggattttttactaagaacatctaacaatgacctaatacaaaaggatgatagttaggaag 4300258  T
Q  220 attaatattgtccctaaa 237  Q
    ||||||||||||| ||||    
T  4300259 attaatattgtccttaaa 4300276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 132 - 197
Target Start/End: Complemental strand, 33439449 - 33439384
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaa 197  Q
    ||||||||||||||||||| ||||||||| ||||||| |||||||| |||||| ||||||||||||    
T  33439449 gagcaatccgatcaagtagtccgaaaatctgatttttaactaagaaaaagtaacaatgacccaaaa 33439384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 120 - 257
Target Start/End: Original strand, 54229776 - 54229913
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    |||||||||| ||||||||| |||||||||||  ||||| |  |||||||||||| ||||| ||| ||||||| | || | || |||  |||| ||||||    
T  54229776 ggggaagtttcagagcaatctgatcaagtagcaagaaaaccgaatttttgactaataacaactaacaatgacctagaacataatgatgcgagtaaggaag 54229875  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaa 257  Q
    |||||||| |||| |||| ||| ||| |||||||||||    
T  54229876 attaatatggtccttaaactggatattcatgttacaaa 54229913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 132 - 239
Target Start/End: Original strand, 14828809 - 14828917
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttt-tgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgt 230  Q
    ||||||||| ||||||||  ||||||||| |||||| ||||||||||||| ||| || ||||||||| | | |||| || |||| ||||||||||||| |    
T  14828809 gagcaatccaatcaagtaatccgaaaatcagattttttgactaagaacaactaacaaggacccaaaacagatggatgagggttatgaagattaatattat 14828908  T
Q  231 ccctaaaat 239  Q
    || ||||||    
T  14828909 ccttaaaat 14828917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 263
Target Start/End: Complemental strand, 8735592 - 8735530
Alignment:
Q  201 aaggataagagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtt 263  Q
    |||||| | ||||||||||||||||||||||| ||||||| ||||  |||||||||| |||||    
T  8735592 aaggatgaaagttaggaagattaatattgtccttaaaatgactatcaatgttacaaacatgtt 8735530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 263
Target Start/End: Complemental strand, 9087833 - 9087771
Alignment:
Q  201 aaggataagagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtt 263  Q
    |||||| | ||||||||||||||||||||||| ||||||| ||||  |||||||||| |||||    
T  9087833 aaggatgaaagttaggaagattaatattgtccttaaaatgactatcaatgttacaaacatgtt 9087771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 263
Target Start/End: Original strand, 47979895 - 47980028
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataa--aaggataagagttaggaagattaatattg 229  Q
    |||||||| |||||||||||||| ||||    ||||||| ||| ||||| ||| ||||||| ||||| |  |   || |||||||| |||||||||||||    
T  47979895 gagcaatctgatcaagtagcccggaaattgattttttgattaataacaactaacaatgacctaaaatgactatccatgagagttagaaagattaatattg 47979994  T
Q  230 tccctaaaatggctatacatgttacaaatatgtt 263  Q
    ||| ||||||| ||||  |||||| |||||||||    
T  47979995 tccttaaaatgactatctatgttataaatatgtt 47980028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 265
Target Start/End: Original strand, 33842034 - 33842098
Alignment:
Q  201 aaggataagagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgttta 265  Q
    |||||| ||||||| ||| ||||||||||||| ||||||| |||| ||| ||||||| |||||||    
T  33842034 aaggatgagagttacgaacattaatattgtccttaaaatgactatccatattacaaacatgttta 33842098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 263
Target Start/End: Complemental strand, 47769530 - 47769399
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    ||||||||||||||| || |||||| |||   |||| ||||  |||||| ||| ||||||| |||||| || ||| | |||||  |||||||||||  |     
T  47769530 gagcaatccgatcaaataacccgaatatcattttttcgactgggaacaactaacaatgacctaaaatagaatgatgatagttaaaaagattaatatgatt 47769431  T
Q  232 cctaaaatggctatacatgttacaaatatgtt 263  Q
    | ||||||| |||| ||||||||||| |||||    
T  47769430 cttaaaatgactatccatgttacaaacatgtt 47769399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 45244577 - 45244527
Alignment:
Q  213 taggaagattaatattgtccctaaaatggctatacatgttacaaatatgtt 263  Q
    |||||||||||||||||||| ||||||| |||  ||||||||||| |||||    
T  45244577 taggaagattaatattgtccttaaaatgactaaccatgttacaaacatgtt 45244527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 277
Target Start/End: Original strand, 27143351 - 27143452
Alignment:
Q  176 aacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgc 275  Q
    ||||| ||| ||||| |||||||| |||||| |  ||||||||  |||||||| ||| ||||||  |||| ||||||||||| ||||| || || |||||    
T  27143351 aacaactaacaatgatccaaaatagaaggatgatggttaggaatcttaatattatccttaaaataactatccatgttacaaacatgttcagaatttgtgc 27143450  T
Q  276 tg 277  Q
    ||    
T  27143451 tg 27143452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 266
Target Start/End: Complemental strand, 29036013 - 29035933
Alignment:
Q  186 aatgacccaaaataaaaggataagagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtttag 266  Q
    ||||||| |||| | || ||| ||||||||||||| |||||| |||| |||||||  ||| ||||||||||| ||| ||||    
T  29036013 aatgacctaaaacataatgatgagagttaggaagagtaatatggtccttaaaatgattatccatgttacaaacatgcttag 29035933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 121; Significance: 5e-62; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 121 - 277
Target Start/End: Original strand, 3304638 - 3304794
Alignment:
Q  121 gggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaaga 220  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||| |||| |||||||||||| |||| |||||||||||||||||    
T  3304638 gggaagtttcagagcaatccgatcaagtagcccgagaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaatgataagagttaggaaga 3304737  T
Q  221 ttaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  3304738 ttaatattgtccctaaaatggttatacatgttacaaatatgtttaggatttgtgctg 3304794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 121 - 277
Target Start/End: Complemental strand, 8155178 - 8155022
Alignment:
Q  121 gggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaaga 220  Q
    ||||||||| ||| |||| ||||||||||| ||||||| |||||||||||||||||||| |||| ||||||| |||| ||||||||||||| ||||||||    
T  8155178 gggaagtttcagaacaattcgatcaagtagtccgaaaacccgatttttgactaagaacaggtaataatgaccaaaaacaaaaggataagagctaggaaga 8155079  T
Q  221 ttaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    || |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  8155078 ttgatattgtccctaaaatggctatacatgttacaaatatgtttaggatttgtgctg 8155022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 122 - 269
Target Start/End: Complemental strand, 31643318 - 31643172
Alignment:
Q  122 ggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagat 221  Q
    |||||||| |||||||||||||||||||| ||||||  |||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||    
T  31643318 ggaagtttcagagcaatccgatcaagtagtccgaaac-ccgatttttgactaagaacatgtaacaatgacccaaaacaaaaggataagagttaggaagat 31643220  T
Q  222 taatattgtccctaaaatggctatacatgttacaaatatgtttaggat 269  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||    
T  31643219 taatattgtccctaaaatagctatacatgttaaaaatatgtttaggat 31643172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 120 - 277
Target Start/End: Complemental strand, 47202767 - 47202617
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    |||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||| |       |||||||||| |||||||||||||||||||||    
T  47202767 ggggaagtttaagagcaatccaatcaagtagcccgaaaacccgatttttgactaagaacga-------tgacccaaaacaaaaggataagagttaggaag 47202675  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  47202674 attaatattgtccctaaaacggctatacatgttacaaatatgtttaggatttgtgctg 47202617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 120 - 265
Target Start/End: Complemental strand, 3936388 - 3936243
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||  |||||||||||||||| || |||||||||||||||||||||||||| | |||| |||||||||||||| |||||| ||||||||||||    
T  3936388 ggggaagtttcggagcaatccgatcaagcagtccgaaaatccgatttttgactaagaataggtaacaatgacccaaaatagaaggatgagagttaggaag 3936289  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgttta 265  Q
    |||||||||||||||||||||  ||| ||||||||||| |||||||    
T  3936288 attaatattgtccctaaaatgattatccatgttacaaacatgttta 3936243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 120 - 277
Target Start/End: Original strand, 36468416 - 36468573
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||  ||||||||||||||||||||||||||| ||||||||| |||||||||| |||| |||||||||||| | |||||| ||||||| ||||    
T  36468416 ggggaagtttcggagcaatccgatcaagtagcccgaaaacccgattttttactaagaacatgtaacaatgacccaaaacagaaggatgagagttatgaag 36468515  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||||||||||| ||||||||| |||| ||||||||||| |||||||| || |||||||    
T  36468516 attaatattgttcctaaaatgactatccatgttacaaacatgtttagaatttgtgctg 36468573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 120 - 276
Target Start/End: Original strand, 33573922 - 33574078
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    |||||||||| ||||||||||||||||||||  |||||| || |||||||| ||| |||| |||| |||||| ||||| ||||||||||||||||| |||    
T  33573922 ggggaagtttcagagcaatccgatcaagtagttcgaaaacccaatttttgattaaaaacatgtaacaatgactcaaaacaaaaggataagagttagaaag 33574021  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgct 276  Q
    |||||||||||||||||||| | ||||||||||||||||||||||| ||| ||||||    
T  33574022 attaatattgtccctaaaatagttatacatgttacaaatatgtttatgatttgtgct 33574078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 122 - 277
Target Start/End: Complemental strand, 9152074 - 9151919
Alignment:
Q  122 ggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagat 221  Q
    ||||||||  ||||||||||||||||||| || |||| ||||||||| |||||||||| |||| |||||||||||| | |||||| ||||||||||||||    
T  9152074 ggaagtttcggagcaatccgatcaagtagtccaaaaacccgattttttactaagaacatgtaacaatgacccaaaacagaaggatgagagttaggaagat 9151975  T
Q  222 taatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||||||||||||||||||| |||| ||||||||||| |||||||| || |||||||    
T  9151974 taatattgtccctaaaatgactatccatgttacaaacatgtttagaatttgtgctg 9151919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 132 - 277
Target Start/End: Original strand, 42925531 - 42925677
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataa-aaggataagagttaggaagattaatattgt 230  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||| ||||||    |||||| |||||||||||||||||||||||    
T  42925531 gagcaatccgatcaagtagcccgaaaacccaatttttgactaagaacaagtaacaatgatccaaaaacggaaggatgagagttaggaagattaatattgt 42925630  T
Q  231 ccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    |||||||||| |||| ||||||||||| |||||||| || |||||||    
T  42925631 ccctaaaatgactatccatgttacaaacatgtttagaatttgtgctg 42925677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 120 - 277
Target Start/End: Original strand, 42864981 - 42865138
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||| |||| |||||||||||||||||||| ||||||| | |||||||||| ||||||| || | |||||||||||| | |||||| ||||||||||||    
T  42864981 ggggatgtttcagagcaatccgatcaagtagtccgaaaacctgatttttgaccaagaacaggtgacaatgacccaaaacagaaggatgagagttaggaag 42865080  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||||||||||||||||||||| |||| ||||||||||| || ||||| || |||||||    
T  42865081 attaatattgtccctaaaatgactatccatgttacaaacatatttagaatttgtgctg 42865138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 132 - 277
Target Start/End: Complemental strand, 19818648 - 19818503
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    ||||||||||||||||||| || |||| |||||||| ||| ||||||| |||| |||||||||||| | |||||| ||||||||||||||||||||||||    
T  19818648 gagcaatccgatcaagtagtccaaaaacccgattttcgaccaagaacaggtaacaatgacccaaaacagaaggatgagagttaggaagattaatattgtc 19818549  T
Q  232 cctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||||||||  |||| ||||||||||  ||||||||||| |||||||    
T  19818548 cctaaaataactatccatgttacaagcatgtttaggatttgtgctg 19818503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 132 - 245
Target Start/End: Complemental strand, 43737350 - 43737237
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    ||||||||||||||||||||||||||| ||| ||||| |||||||||| |||| |||||||||||| | |||||| ||||||||||||||||||||||||    
T  43737350 gagcaatccgatcaagtagcccgaaaacccggtttttaactaagaacatgtaacaatgacccaaaacataaggatcagagttaggaagattaatattgtc 43737251  T
Q  232 cctaaaatggctat 245  Q
    ||||||||| ||||    
T  43737250 cctaaaatgactat 43737237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 123 - 257
Target Start/End: Original strand, 24690215 - 24690350
Alignment:
Q  123 gaagttttagagcaatccgatcaagtagcccgaaaa-tccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagat 221  Q
    |||||||  ||||||||||||||||||||||||||| ||||||| ||||||||||||  |||| |||||||||||| |||||||| ||||||||| ||||    
T  24690215 gaagtttcggagcaatccgatcaagtagcccgaaaaatccgattattgactaagaacgggtaacaatgacccaaaacaaaaggatgagagttaggtagat 24690314  T
Q  222 taatattgtccctaaaatggctatacatgttacaaa 257  Q
    ||||||||||| ||||||| | || |||||||||||    
T  24690315 taatattgtccataaaatgacgatccatgttacaaa 24690350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 123 - 277
Target Start/End: Complemental strand, 36408648 - 36408494
Alignment:
Q  123 gaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagatt 222  Q
    |||||||  ||||||||||||||||||| ||||||| |  ||||||||||||||||| |||| |||||||||||| | ||| |  ||||||| |||||||    
T  36408648 gaagtttcggagcaatccgatcaagtagtccgaaaaccaaatttttgactaagaacacgtaacaatgacccaaaacagaagaaagagagttaagaagatt 36408549  T
Q  223 aatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    |||||||||||||||||  |||| ||||||||||| |||||||| || |||||||    
T  36408548 aatattgtccctaaaattactatccatgttacaaacatgtttagaatttgtgctg 36408494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 120 - 240
Target Start/End: Complemental strand, 36629483 - 36629363
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||| || |||| | ||| |||||| | |||||| ||||||||||||    
T  36629483 ggggaagtttcggagcaatccgatcaagtagcccgaaaacccgatttttgactaagaccaggtaacagtgagccaaaacagaaggatgagagttaggaag 36629384  T
Q  220 attaatattgtccctaaaatg 240  Q
    ||||||||| |||||||||||    
T  36629383 attaatattctccctaaaatg 36629363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 122 - 253
Target Start/End: Original strand, 7115151 - 7115282
Alignment:
Q  122 ggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagat 221  Q
    |||||||| |||||||| |||||||||||||||||||  |||||||||||||||||||| ||| ||||||| |||||| |||||| |||||||  |||||    
T  7115151 ggaagtttcagagcaatacgatcaagtagcccgaaaacacgatttttgactaagaacaactaacaatgaccaaaaatagaaggatgagagttatcaagat 7115250  T
Q  222 taatattgtccctaaaatggctatacatgtta 253  Q
    ||||||||||| |||| ||| ||| |||||||    
T  7115251 taatattgtccataaattggttatccatgtta 7115282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 152 - 277
Target Start/End: Original strand, 28230379 - 28230504
Alignment:
Q  152 ccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtccctaaaatggctatacatgt 251  Q
    ||||||| |||| ||||||||||||||| | || |||||||||||| | |||||| ||||||||||||||||||||||||| ||||||| |||| |||||    
T  28230379 ccgaaaacccgaattttgactaagaacatgcaacaatgacccaaaacagaaggatgagagttaggaagattaatattgtccataaaatgactatccatgt 28230478  T
Q  252 tacaaatatgtttaggatctgtgctg 277  Q
    |||||| |||||||| || |||||||    
T  28230479 tacaaacatgtttagaatttgtgctg 28230504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 136 - 277
Target Start/End: Complemental strand, 33151467 - 33151331
Alignment:
Q  136 aatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtcccta 235  Q
    ||||||||||||||| | ||||| || |||||||||||||||||  ||| |||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  33151467 aatccgatcaagtagtcagaaaacccaatttttgactaagaacagataacaatgacccaaaatagaaggatgagagttaggaagattaatattgtcccta 33151368  T
Q  236 aaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    |     |||| ||||||||||| |||||||| || |||||||    
T  33151367 a-----ctattcatgttacaaacatgtttagaatttgtgctg 33151331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 132 - 265
Target Start/End: Complemental strand, 1518975 - 1518842
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    ||||||||||||||||||| ||||||| || |||||| ||||||||||  ||| ||| |||||||||| |||||| ||||||| ||||||||||||||||    
T  1518975 gagcaatccgatcaagtagtccgaaaaccctattttttactaagaacagctaacaataacccaaaatagaaggatgagagttaagaagattaatattgtc 1518876  T
Q  232 cctaaaatggctatacatgttacaaatatgttta 265  Q
    | |||||||  |||  |||||||||| |||||||    
T  1518875 cataaaatgattatcgatgttacaaacatgttta 1518842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 120 - 277
Target Start/End: Original strand, 19225477 - 19225634
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||  ||||||||||||||| ||| ||||||| | ||||||||||||||||   |||| |||||||||||| | |||||| ||||||||||||    
T  19225477 ggggaagtttcggagcaatccgatcaaatagtccgaaaacctgatttttgactaagaatgggtaacaatgacccaaaacagaaggatgagagttaggaag 19225576  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||| ||||  ||| |||||||  ||| ||||||||||| |||||||| || |||||||    
T  19225577 atttatatcatccataaaatgaatatccatgttacaaacatgtttagaatttgtgctg 19225634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 124 - 265
Target Start/End: Original strand, 31985400 - 31985541
Alignment:
Q  124 aagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagatta 223  Q
    ||||||| || ||||| ||||||||||||| |||| | |||||||||||||||||   ||| |||||||||||| | || ||| |||||||| |||||||    
T  31985400 aagttttggaacaatctgatcaagtagcccaaaaaccagatttttgactaagaacggttaacaatgacccaaaacagaatgatgagagttagaaagatta 31985499  T
Q  224 atattgtccctaaaatggctatacatgttacaaatatgttta 265  Q
    ||||||||| ||||||| |||| ||||||| |||||||||||    
T  31985500 atattgtccataaaatgactattcatgttaaaaatatgttta 31985541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 120 - 257
Target Start/End: Original strand, 36946171 - 36946307
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||   |||||| |||||||||| |||||||| | || |||||||||| ||||| ||| |||||||||||| |||||||| ||||||||||||    
T  36946171 ggggaagtttcgaagcaattcgatcaagtatcccgaaaaccagaattttgactaataacaactaacaatgacccaaaacaaaaggatgagagttaggaag 36946270  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaa 257  Q
     |||||||||| | |||||||  ||| |||||||||||    
T  36946271 cttaatattgt-cttaaaatgattattcatgttacaaa 36946307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 124 - 212
Target Start/End: Original strand, 26555040 - 26555128
Alignment:
Q  124 aagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagt 212  Q
    |||||| |||||||||||||||||||||||||||| ||| ||||| |||||||||| |||| |||||||||||||| |||||| |||||    
T  26555040 aagtttcagagcaatccgatcaagtagcccgaaaacccgtttttttactaagaacatgtaacaatgacccaaaatagaaggatgagagt 26555128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 263
Target Start/End: Complemental strand, 5278501 - 5278401
Alignment:
Q  163 atttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgt 262  Q
    |||| |||||||||||   ||| |||||||||||| | |||||||||||||||||||||||||||| ||| ||||||| |||| ||||||||||| ||||    
T  5278501 atttgtgactaagaacggctaacaatgacccaaaacagaaggataagagttaggaagattaatattatccttaaaatgactatccatgttacaaacatgt 5278402  T
Q  263 t 263  Q
    |    
T  5278401 t 5278401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 266
Target Start/End: Original strand, 6467020 - 6467165
Alignment:
Q  121 gggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaaga 220  Q
    ||||| ||| ||| |||||||||||||||||| ||| | |  |||||| ||||||||||  ||| ||||||| |||||| |||||  ||||||||||| |    
T  6467020 gggaaatttcagaacaatccgatcaagtagccggaataccaaatttttaactaagaacagctaacaatgacctaaaatagaaggaagagagttaggaaaa 6467119  T
Q  221 ttaatattgtccctaaaatggctatacatgttacaaatatgtttag 266  Q
    ||||||||| || ||||||  |||| ||| ||||||| ||||||||    
T  6467120 ttaatattgcccttaaaataactatccatattacaaacatgtttag 6467165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 277
Target Start/End: Original strand, 24042148 - 24042224
Alignment:
Q  201 aaggataagagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||  |||||||||| |||||||| || |||||||    
T  24042148 aaggatgagagttaggaagattgatattgtccctaaaatgactatcaatgttacaaacatgtttagaatttgtgctg 24042224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 227
Target Start/End: Original strand, 37398771 - 37398877
Alignment:
Q  121 gggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaaga 220  Q
    |||||||||  |||||||| ||||||||||||  |||| |  |||||| ||||||||||| ||| ||||||| |||| | || ||| |||||||||||||    
T  37398771 gggaagtttcggagcaatctgatcaagtagcctaaaaaccgaattttttactaagaacaactaacaatgacctaaaacagaatgatgagagttaggaaga 37398870  T
Q  221 ttaatat 227  Q
    |||||||    
T  37398871 ttaatat 37398877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 263
Target Start/End: Original strand, 48776100 - 48776233
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataa--aaggataagagttaggaagattaatattg 229  Q
    |||||||| ||| ||||||| ||||||||  |||||||||||||||||| ||  ||||||| ||||| |  | | || |||||||||||||||||||||     
T  48776100 gagcaatctgattaagtagctcgaaaatcaaatttttgactaagaacaactagcaatgacctaaaatgactatgcatgagagttaggaagattaatatta 48776199  T
Q  230 tccctaaaatggctatacatgttacaaatatgtt 263  Q
    ||| ||||||  |||| ||||||| ||| |||||    
T  48776200 tccttaaaatcactatccatgttataaacatgtt 48776233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 172 - 257
Target Start/End: Original strand, 16983673 - 16983758
Alignment:
Q  172 taagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtccctaaaatggctatacatgttacaaa 257  Q
    ||||||||  ||| ||||||| |||||| |||||| ||||||||||||||||||||||||  |||| ||| ||| |||||||||||    
T  16983673 taagaacagctaataatgaccaaaaatagaaggatgagagttaggaagattaatattgtctgtaaactggttatccatgttacaaa 16983758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 266
Target Start/End: Original strand, 37518233 - 37518320
Alignment:
Q  179 aagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtttag 266  Q
    |||||| ||||||| |||| | |||||| ||||||||||||||||||| ||| ||||||||| ||||   ||||||||| ||||||||    
T  37518233 aagtaacaatgacctaaaacagaaggatgagagttaggaagattaatagtgttcctaaaatgactatctctgttacaaacatgtttag 37518320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 226
Target Start/End: Complemental strand, 39582019 - 39581913
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    |||||| ||||  ||||||  ||||||||||||| |||| | |||||||||| ||||| || ||| ||||||| |||| | ||| || ||||||| ||||    
T  39582019 ggggaattttttaagcaatatgatcaagtagcccaaaaaccggatttttgacgaagaataactaacaatgacctaaaacagaagaatgagagttatgaag 39581920  T
Q  220 attaata 226  Q
    |||||||    
T  39581919 attaata 39581913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 8214462 - 8214523
Alignment:
Q  202 aggataagagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtt 263  Q
    ||||| ||||||||||||||||||||||||| ||||||| | ||  |||||||||| |||||    
T  8214462 aggatgagagttaggaagattaatattgtccttaaaatgacaatcgatgttacaaacatgtt 8214523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 193
Target Start/End: Original strand, 37518142 - 37518215
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgaccc 193  Q
    ||||||||||  ||||||||||||||| ||| || |||| || |||||| |||||||||| |||| ||||||||    
T  37518142 ggggaagtttcggagcaatccgatcaaatagtccaaaaacccaatttttaactaagaacaggtaacaatgaccc 37518215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 277
Target Start/End: Original strand, 48705899 - 48706035
Alignment:
Q  141 gatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtccctaaaatg 240  Q
    |||||||||||||||||||   |||||| ||| |||||||  || ||||||| |||| | || |||  ||||||||||||||||||| || | |||| |     
T  48705899 gatcaagtagcccgaaaattgaattttttactgagaacaataaacaatgacctaaaacataaagatccgagttaggaagattaatatggtacttaaacta 48705998  T
Q  241 gctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    | ||| | ||||| ||||| | |||| ||||||||||    
T  48705999 gttatccgtgttaaaaataggcttagaatctgtgctg 48706035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 263
Target Start/End: Original strand, 8214257 - 8214312
Alignment:
Q  208 agagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtt 263  Q
    ||||||||||||||||||||||||| || |||| |||| |||||| |||| |||||    
T  8214257 agagttaggaagattaatattgtccttagaatgactatccatgttgcaaacatgtt 8214312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 265
Target Start/End: Complemental strand, 48775798 - 48775743
Alignment:
Q  210 agttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgttta 265  Q
    ||||||||||||||||||||||| |||| || |||| ||||||||||  |||||||    
T  48775798 agttaggaagattaatattgtccttaaactgactattcatgttacaagcatgttta 48775743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 47239570 - 47239622
Alignment:
Q  122 ggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaa 174  Q
    ||||||||  |||||||| |||||||||  ||||||||| |||||||||||||    
T  47239570 ggaagtttcggagcaatctgatcaagtactccgaaaatcagatttttgactaa 47239622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 117; Significance: 1e-59; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 121 - 269
Target Start/End: Original strand, 6228693 - 6228841
Alignment:
Q  121 gggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaaga 220  Q
    |||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||    
T  6228693 gggaagttttagagcaatccgatcaaatagcccgaaaacccaatttttgactaagaacaggtaacaatgacccaaaacaaaaggataagagttaggaaga 6228792  T
Q  221 ttaatattgtccctaaaatggctatacatgttacaaatatgtttaggat 269  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  6228793 ttaatattgtccctaaaatggctatacatgttactaatatctttaggat 6228841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 120 - 277
Target Start/End: Complemental strand, 32442098 - 32441941
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    |||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||    
T  32442098 ggggaagtttcagagcaatccgatcaagtagcccgaaaactcgatttttgactaagaacaggtaacaatgacccaaaacaaaaggataagagttaggaag 32441999  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||||||||||||  |||||||| ||||||||||||||||||||||| ||| |||||||    
T  32441998 attaatattgtctttaaaatggttatacatgttacaaatatgtttacgatatgtgctg 32441941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 121 - 269
Target Start/End: Complemental strand, 34973151 - 34973003
Alignment:
Q  121 gggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaaga 220  Q
    ||||||||| |||||||||||||||||||| | ||||| ||||||||||||||||||||  ||| ||||||| |||| ||||||||||||||||||||||    
T  34973151 gggaagtttcagagcaatccgatcaagtagtctgaaaacccgatttttgactaagaacagataacaatgacctaaaacaaaaggataagagttaggaaga 34973052  T
Q  221 ttaatattgtccctaaaatggctatacatgttacaaatatgtttaggat 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  34973051 ttaatattgtccctaaaatggctatacatgttacaaatatgtttaggat 34973003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 124 - 275
Target Start/End: Original strand, 6003556 - 6003707
Alignment:
Q  124 aagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagatta 223  Q
    |||||| |||||||||| ||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  6003556 aagtttcagagcaatccaatcaagtagcccgaaaacctgatttttgactaagaacaagtaacaatgacccaaaacaaaaggataagagttaggaagatta 6003655  T
Q  224 atattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgc 275  Q
    ||||| ||||||||||| |||||||| ||| ||||||||||| ||| |||||    
T  6003656 atattatccctaaaatgactatacatattaaaaatatgtttatgatttgtgc 6003707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 121 - 269
Target Start/End: Complemental strand, 49397299 - 49397147
Alignment:
Q  121 gggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaaga 220  Q
    ||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||| |||| |||||| ||||| ||||||||||||||||||||||    
T  49397299 gggaagtttcagagcaatccgatcaagtagctcgaaaacccgatttttgactaagaacatgtaacaatgactcaaaacaaaaggataagagttaggaaga 49397200  T
Q  221 ttaatattgtccctaaa----atggctatacatgttacaaatatgtttaggat 269  Q
    |||||||||||||||||    |||| |||||||||||||||||||||||||||    
T  49397199 ttaatattgtccctaaaatggatggttatacatgttacaaatatgtttaggat 49397147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 120 - 277
Target Start/End: Original strand, 41412977 - 41413134
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    |||||||||| ||| ||||| |||||||||||||||||| | ||||||||| |||||||| |||| ||||||| |||| |||| ||||||||||||||||    
T  41412977 ggggaagtttcagaacaatctgatcaagtagcccgaaaaccagatttttgattaagaacatgtaacaatgacctaaaacaaaatgataagagttaggaag 41413076  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||    
T  41413077 attaatattgttcctaaaatgactatacatgttacaaatatgtttaggatttgtgctg 41413134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 122 - 277
Target Start/End: Original strand, 53893906 - 53894061
Alignment:
Q  122 ggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagat 221  Q
    |||||||| |||||||||||||||||||| | ||||| |||||||||||||||||||| |||| |||||||||||| | |||||| |||||||| |||||    
T  53893906 ggaagtttcagagcaatccgatcaagtagtctgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacagaaggatgagagttagaaagat 53894005  T
Q  222 taatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||||||||||||||||||| |||| ||||||||||| |||||||| || |||||||    
T  53894006 taatattgtccctaaaatgactatccatgttacaaacatgtttagaatttgtgctg 53894061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 120 - 277
Target Start/End: Original strand, 25491274 - 25491431
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    |||||| |||| ||||||||||||||||||| || |||| |||||||||||||||||||| |||| |||||||||||| | |||||| ||||||||||||    
T  25491274 ggggaaattttggagcaatccgatcaagtagtccaaaaacccgatttttgactaagaacatgtaacaatgacccaaaacagaaggatgagagttaggaag 25491373  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||||||||||||| ||||||| |||| ||||||||||| |||||||| || |||||||    
T  25491374 attaatattgtccataaaatgactattcatgttacaaacatgtttagaatttgtgctg 25491431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 132 - 265
Target Start/End: Original strand, 2505922 - 2506055
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||| |||| |||||||||||| | |||||| ||| ||||||||||||||||||||    
T  2505922 gagcaatccgatcaagtagcccgaaaacccgattattgactaagaacatgtaacaatgacccaaaacagaaggatgagaattaggaagattaatattgtc 2506021  T
Q  232 cctaaaatggctatacatgttacaaatatgttta 265  Q
    ||||||||| |||| ||||||||||| |||||||    
T  2506022 cctaaaatgactatccatgttacaaacatgttta 2506055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 120 - 277
Target Start/End: Complemental strand, 40703952 - 40703795
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||   |||||||||||||||||| || |||| |||||||||||||||||| |  ||| |||||||||||| | |||||| ||||||||||||    
T  40703952 ggggaagtttcttagcaatccgatcaagtagtccaaaaacccgatttttgactaagaaaagataacaatgacccaaaacagaaggatgagagttaggaag 40703853  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||||||||||||||||||||| |||| ||||||||||| |||||||| || |||||||    
T  40703852 attaatattgtccctaaaatgactatccatgttacaaacatgtttagaatttgtgctg 40703795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 133 - 277
Target Start/End: Original strand, 48318956 - 48319100
Alignment:
Q  133 agcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtcc 232  Q
    |||||||||||||||||| ||||||||||||||||| |||||||| |  ||| |||||||||||| | |||||| |||||||||||||||||||||||||    
T  48318956 agcaatccgatcaagtagtccgaaaatccgattttttactaagaatagataacaatgacccaaaacagaaggatgagagttaggaagattaatattgtcc 48319055  T
Q  233 ctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    |||||||| ||||  |||||||||| |||||||| || |||||||    
T  48319056 ctaaaatgactatcaatgttacaaacatgtttagaatttgtgctg 48319100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 54631371 - 54631486
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||| |||| |||||||||||| | |||||| ||||||||||||    
T  54631371 ggggaagttttggagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacagaaggatgagagttaggaag 54631470  T
Q  220 attaatattgtcccta 235  Q
    ||||||||||||||||    
T  54631471 attaatattgtcccta 54631486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 121 - 277
Target Start/End: Original strand, 55052498 - 55052655
Alignment:
Q  121 gggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacc-caaaataaaaggataagagttaggaag 219  Q
    |||||||||  ||||||||| |||||||||||||||||| ||||||||||||||||||| |||| |||||||  |||||  |||||| | ||||||||||    
T  55052498 gggaagtttcggagcaatccaatcaagtagcccgaaaattcgatttttgactaagaacaggtaacaatgaccaaaaaatggaaggatgatagttaggaag 55052597  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||||| ||||||||||||||| |||| ||||||||||| |||||||| || |||||||    
T  55052598 attaacattgtccctaaaatgactatccatgttacaaacatgtttagaatttgtgctg 55052655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 123 - 277
Target Start/End: Original strand, 17933019 - 17933173
Alignment:
Q  123 gaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagatt 222  Q
    |||||||  ||||||||||||||||| | | ||||||| ||||||| |||||||||| |||| |||||||||||| | |||||| |||||||||||||||    
T  17933019 gaagtttcggagcaatccgatcaagtggtctgaaaatctgattttttactaagaacaggtaacaatgacccaaaacagaaggatgagagttaggaagatt 17933118  T
Q  223 aatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    |||| |||||||||||||  ||| ||||||||||| |||||||| || |||||||    
T  17933119 aataatgtccctaaaatgattatccatgttacaaacatgtttagaatttgtgctg 17933173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 132 - 277
Target Start/End: Complemental strand, 19835796 - 19835651
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    ||||||||||||||||||| ||||||| |||| |||||||||| |||| |||| |||||| ||||| | || ||| |||||||||||||||||||||||     
T  19835796 gagcaatccgatcaagtagtccgaaaacccgacttttgactaaaaacaggtaacaatgacgcaaaacagaaagatgagagttaggaagattaatattgtt 19835697  T
Q  232 cctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||||||||| |||| ||||||||||| |||||||| || |||||||    
T  19835696 cctaaaatgactatccatgttacaaacatgtttagaatttgtgctg 19835651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 120 - 277
Target Start/End: Complemental strand, 52089473 - 52089316
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    |||||||||||  |||||||||||||||||| || |||| |||||||||||||||||||| |||| |||||||||||  | ||| || | |||||||||     
T  52089473 ggggaagttttgaagcaatccgatcaagtagtccaaaaacccgatttttgactaagaacaggtaacaatgacccaaaccagaagaatgaaagttaggaaa 52089374  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    |||||||||||||| |||||| |||| ||||||||||| ||||||| ||| |||||||    
T  52089373 attaatattgtcccaaaaatgactatccatgttacaaacatgtttaagatttgtgctg 52089316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 120 - 276
Target Start/End: Original strand, 25752322 - 25752479
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgaccc-aaaataaaaggataagagttaggaa 218  Q
    ||||||||||  |||||||| |||||||||||||||||| |||||||||||||||||||| |||| ||| |||| |||| | || ||| |||| ||||||    
T  25752322 ggggaagtttcggagcaatctgatcaagtagcccgaaaacccgatttttgactaagaacaggtaacaatcacccaaaaacataaagatgagagctaggaa 25752421  T
Q  219 gattaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgct 276  Q
    |||| ||||||||| ||||||| |||| ||||||||||| |||||||| || ||||||    
T  25752422 gattgatattgtccttaaaatgactatccatgttacaaacatgtttagaatttgtgct 25752479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 132 - 277
Target Start/End: Original strand, 31582313 - 31582458
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    ||||||||||||||| |||||||||||   |||||||||||||||||| |||| |||||||||||| | |||||| ||||||||||| ||||| |||||     
T  31582313 gagcaatccgatcaattagcccgaaaactagatttttgactaagaacatgtaacaatgacccaaaacagaaggatgagagttaggaaaattaacattgtt 31582412  T
Q  232 cctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    | ||||||| |||| ||||||||||| |||||||| || |||||||    
T  31582413 cataaaatgactatccatgttacaaacatgtttagaatttgtgctg 31582458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 132 - 266
Target Start/End: Original strand, 41322983 - 41323117
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    ||||||||||||||||||  |||||||  | |||||| ||||||||||| ||| ||||||| |||| |||||||| ||||||||||||||||||||||||    
T  41322983 gagcaatccgatcaagtatgccgaaaactcaatttttaactaagaacaattaacaatgaccaaaaacaaaaggatgagagttaggaagattaatattgtc 41323082  T
Q  232 cctaaaatggctatacatgttacaaatatgtttag 266  Q
    | |||||||  ||| ||||||||||| ||||||||    
T  41323083 cataaaatgattatccatgttacaaacatgtttag 41323117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 120 - 277
Target Start/End: Original strand, 46440151 - 46440310
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaaga--acaagtaagaatgacccaaaataaaaggataagagttagga 217  Q
    ||||||||||  ||||||||||||||||||| ||||||||||||||||||| |||||  ||| |||| ||||| | |||| | |||||| ||||||| ||    
T  46440151 ggggaagtttcggagcaatccgatcaagtagtccgaaaatccgatttttgattaagaacacaggtaacaatgatctaaaagagaaggatgagagttatga 46440250  T
Q  218 agattaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    |||||| ||||||||||||||||  ||| ||||||||||  |||||||| || |||||||    
T  46440251 agattagtattgtccctaaaatgaatatccatgttacaaccatgtttagaatttgtgctg 46440310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 133 - 276
Target Start/End: Complemental strand, 7931931 - 7931789
Alignment:
Q  133 agcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtcc 232  Q
    |||||||||| ||||||| |||||||  ||||||||||| || |||| |||| |||||||||||| | | |||| |||||||||||||||||||||||||    
T  7931931 agcaatccgaccaagtagtccgaaaactcgatttttgaccaaaaacatgtaacaatgacccaaaacaga-ggatgagagttaggaagattaatattgtcc 7931833  T
Q  233 ctaaaatggctatacatgttacaaatatgtttaggatctgtgct 276  Q
    |||||||  |||| ||||||||||| |||||||| || ||||||    
T  7931832 ctaaaataactatccatgttacaaacatgtttagaatttgtgct 7931789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 132 - 265
Target Start/End: Original strand, 27742004 - 27742138
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattg-t 230  Q
    |||||||||||| |||||||||||||| |||||||||||||||||| | |||  |||||| ||||| | |||||| |||||||||||||||||||||| |    
T  27742004 gagcaatccgattaagtagcccgaaaacccgatttttgactaagaaaatgtaccaatgactcaaaacagaaggatgagagttaggaagattaatattgtt 27742103  T
Q  231 ccctaaaatggctatacatgttacaaatatgttta 265  Q
    |||||||||  ||||  |||||||||| |||||||    
T  27742104 ccctaaaataactatttatgttacaaacatgttta 27742138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 124 - 275
Target Start/End: Complemental strand, 38536455 - 38536303
Alignment:
Q  124 aagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataa-aaggataagagttaggaagatt 222  Q
    ||||||| || |||||||||||||||||| |||||   |||||||||||||||||| |||| ||||||| ||||  | ||  || |||||||||||||||    
T  38536455 aagttttggaacaatccgatcaagtagcctgaaaacttgatttttgactaagaacatgtaacaatgacctaaaaacagaataatgagagttaggaagatt 38536356  T
Q  223 aatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgc 275  Q
    |||||||||| ||||||| |||| ||||||||||| |||||||| || |||||    
T  38536355 aatattgtccataaaatgactattcatgttacaaacatgtttagaatttgtgc 38536303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 120 - 265
Target Start/End: Complemental strand, 8106682 - 8106536
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||  ||| |||| ||||||||||||| |||| | ||||||||| |||||||| |||| |||||| ||||| | |||||| |||||||| |||    
T  8106682 ggggaagtttcggagtaatctgatcaagtagcccaaaaacctgatttttgaataagaacaggtaacaatgactcaaaacagaaggatgagagttagaaag 8106583  T
Q  220 attaatattg-tccctaaaatggctatacatgttacaaatatgttta 265  Q
    ||||| |||| || |||||||| |||| ||||||||||| |||||||    
T  8106582 attaacattgttctctaaaatgactatccatgttacaaacatgttta 8106536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 136 - 277
Target Start/End: Original strand, 25538873 - 25539015
Alignment:
Q  136 aatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataa-aaggataagagttaggaagattaatattgtccct 234  Q
    ||||| ||||||||||| ||||| |  ||||||||||||||| | |||| ||||||||||||    |||||| ||||||| ||| |||||||||||||||    
T  25538873 aatccaatcaagtagcctgaaaaccaaatttttgactaagaagaggtaacaatgacccaaaaacggaaggatgagagttaagaaaattaatattgtccct 25538972  T
Q  235 aaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    |||||| |||| ||||||||||| |||||||| || |||||||    
T  25538973 aaaatgactatccatgttacaaacatgtttagaatttgtgctg 25539015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 124 - 213
Target Start/End: Complemental strand, 29822864 - 29822775
Alignment:
Q  124 aagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagtt 213  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||| |||||||| |||| |||||||||||| | |||||| ||||||    
T  29822864 aagtttttgagcaatccgatcaagtagcccgaaaatccaatttttgattaagaacatgtaacaatgacccaaaacagaaggatgagagtt 29822775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 147 - 277
Target Start/End: Original strand, 3703155 - 3703285
Alignment:
Q  147 gtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtccctaaaatggctata 246  Q
    |||||||||||||||||||||||||||| |  | |||| | ||||| |||| | |||||| ||||||| ||||||||||||| | ||||||||| ||||     
T  3703155 gtagcccgaaaatccgatttttgactaaaagtaggtaacattgacctaaaacagaaggatgagagttatgaagattaatattcttcctaaaatgactatc 3703254  T
Q  247 catgttacaaatatgtttaggatctgtgctg 277  Q
     |||||||||| |||||||| || |||||||    
T  3703255 tatgttacaaaaatgtttagaatttgtgctg 3703285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 120 - 257
Target Start/End: Complemental strand, 47456888 - 47456751
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||  |||||||| |||||||||||||||||| |  ||||||||||||||| |  ||| ||||||| |||| | |||||| ||| ||||||||    
T  47456888 ggggaagtttcggagcaatctgatcaagtagcccgaaaaccgaatttttgactaagaatatctaacaatgacctaaaacataaggatgagatttaggaag 47456789  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaa 257  Q
    |||||||| |||| |||| | | ||| |||||||||||    
T  47456788 attaatatggtccttaaactagttatccatgttacaaa 47456751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 180
Target Start/End: Complemental strand, 38417080 - 38417020
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaa 180  Q
    ||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||    
T  38417080 ggggaagttttagagcactccgatcaagtagctcgaaaacccgatttttgactaagaacaa 38417020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 275
Target Start/End: Complemental strand, 7863717 - 7863574
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    |||||||| ||| |||||||||||||| |  |||||| | ||||||||  ||  ||||||| |||| | |||||||| ||||||||| ||||||||||||    
T  7863717 gagcaatctgattaagtagcccgaaaaccgaattttttattaagaacagttaccaatgacctaaaacagaaggataaaagttaggaatattaatattgtc 7863618  T
Q  232 cctaaaatggctatacatgttacaaatatgtttaggatctgtgc 275  Q
    | |||||||  | | ||||||||||| |||||||| || |||||    
T  7863617 cttaaaatgattgtccatgttacaaacatgtttagaatttgtgc 7863574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 263
Target Start/End: Original strand, 14474103 - 14474233
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    ||||||||||||||||||||  |||||   |||||||||  ||||||| |||| ||||||| |||||| |||||| || ||||||||||||||||||||     
T  14474103 gagcaatccgatcaagtagcttgaaaacaggatttttgatcaagaacaggtaacaatgacctaaaatagaaggatgagggttaggaagattaatattgt- 14474201  T
Q  232 cctaaaatggctatacatgttacaaatatgtt 263  Q
     || ||| | |||| ||||||||||| |||||    
T  14474202 tcttaaacgactatccatgttacaaacatgtt 14474233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 49001451 - 49001518
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaata 199  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||  ||| ||||||||||||||    
T  49001451 gagcaatccgatcaagtagcccgaaaatcagatttttgactatgaacagttaacaatgacccaaaata 49001518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 265
Target Start/End: Complemental strand, 47874037 - 47873953
Alignment:
Q  181 gtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgttta 265  Q
    |||| ||||| |||||| | |||||| ||| ||| ||||||||||||||||||||||||| |||| ||||||| ||| |||||||    
T  47874037 gtaacaatgatccaaaacagaaggatgagaattaagaagattaatattgtccctaaaatgactatccatgttataaacatgttta 47873953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 55838875 - 55838978
Alignment:
Q  124 aagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagatta 223  Q
    |||||||||||||||| | | |||||||||||||| |  ||||| ||||  |||||| ||| ||||||| |||| | |||||| ||||||||| ||||||    
T  55838875 aagttttagagcaatctggttaagtagcccgaaaaccaaattttcgactgggaacaactaacaatgacctaaaacataaggattagagttagggagatta 55838974  T
Q  224 atat 227  Q
    ||||    
T  55838975 atat 55838978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 263
Target Start/End: Original strand, 25140466 - 25140528
Alignment:
Q  201 aaggataagagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtt 263  Q
    |||||| ||||||||||||||||||||||| | |||||||  ||||||||||||||| |||||    
T  25140466 aaggatgagagttaggaagattaatattgttcttaaaatgattatacatgttacaaacatgtt 25140528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 25140894 - 25140944
Alignment:
Q  213 taggaagattaatattgtccctaaaatggctatacatgttacaaatatgtt 263  Q
    |||||||||||||||||||| ||||||| |||| ||||||||||| |||||    
T  25140894 taggaagattaatattgtccttaaaatgactatccatgttacaaacatgtt 25140944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 277
Target Start/End: Complemental strand, 27879792 - 27879679
Alignment:
Q  164 tttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtt 263  Q
    |||||||||| |||||| ||| ||||| | |||| ||||  || ||||||||||| |||||||| |||| ||||||| | || ||||||||||  |||||    
T  27879792 tttttgactaggaacaactaacaatgatctaaaacaaaattatgagagttaggaatattaatatggtccttaaaatgaccattcatgttacaagcatgtt 27879693  T
Q  264 taggatctgtgctg 277  Q
     || || |||||||    
T  27879692 cagaatttgtgctg 27879679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 4936614 - 4936666
Alignment:
Q  127 ttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaaca 179  Q
    |||| ||||||||||||||| |||||| |||||| ||||||| ||||||||||    
T  4936614 ttttggagcaatccgatcaaatagcccaaaaatcagatttttaactaagaaca 4936666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 266
Target Start/End: Complemental strand, 37222206 - 37222103
Alignment:
Q  163 atttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaaga-ttaatattgtccctaaaatggctatacatgttacaaatatg 261  Q
    |||||| ||||||||||| ||| |||||||||||| | || ||| ||| ||| ||||| ||||||| |||| |||| ||| ||| ||||||||||| |||    
T  37222206 attttttactaagaacaactaacaatgacccaaaacagaatgatgaga-ttaagaagaattaatatggtccttaaagtggttatccatgttacaaacatg 37222108  T
Q  262 tttag 266  Q
    |||||    
T  37222107 tttag 37222103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 277
Target Start/End: Original strand, 49002822 - 49002890
Alignment:
Q  209 gagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    |||||||||||||||||||| ||| ||||||| ||||  |||||||||| || ||||| || |||||||    
T  49002822 gagttaggaagattaatattttccataaaatgactatttatgttacaaacatatttagaatttgtgctg 49002890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 227
Target Start/End: Original strand, 55774704 - 55774800
Alignment:
Q  131 agagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatat 227  Q
    ||||||||| | | |||||||||||||| |  ||||| ||||  |||||| ||| ||||||| |||| | |||||| ||||||||| ||||||||||    
T  55774704 agagcaatctggttaagtagcccgaaaaccaaattttcgactgggaacaactaataatgacctaaaacataaggattagagttagggagattaatat 55774800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 227
Target Start/End: Complemental strand, 1788238 - 1788175
Alignment:
Q  164 tttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatat 227  Q
    ||||| ||||||||||||||| ||||||| |||| | ||| || ||||||| ||||||||||||    
T  1788238 ttttttactaagaacaagtaacaatgacctaaaacagaagaatgagagttatgaagattaatat 1788175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 245
Target Start/End: Complemental strand, 39118367 - 39118308
Alignment:
Q  186 aatgacccaaaataaaaggataagagttaggaagattaatattgtccctaaaatggctat 245  Q
    ||||||| ||| || ||||||||||||||| ||||||||||| |||| |||| |||||||    
T  39118367 aatgacctaaattagaaggataagagttagtaagattaatatggtccttaaactggctat 39118308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 257
Target Start/End: Original strand, 42497809 - 42497892
Alignment:
Q  174 agaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtccctaaaatggctatacatgttacaaa 257  Q
    ||||||| ||| ||||||| |||| |||| ||| |||||||| ||||||||||| |||| |||| | |||||| | ||||||||    
T  42497809 agaacaactaacaatgacctaaaacaaaatgatgagagttagaaagattaatatggtccttaaactagctatataagttacaaa 42497892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 25140687 - 25140737
Alignment:
Q  213 taggaagattaatattgtccctaaaatggctatacatgttacaaatatgtt 263  Q
    ||||||||||||||||||||  |||||| |||| ||||||||||| |||||    
T  25140687 taggaagattaatattgtcctcaaaatgactatccatgttacaaacatgtt 25140737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 237
Target Start/End: Complemental strand, 20078832 - 20078719
Alignment:
Q  124 aagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagatta 223  Q
    |||||| ||||||||  ||||||||||||| |||| | ||||||  ||||||||  | ||| ||||||| |||| | ||||||  ||| |||||| ||||    
T  20078832 aagtttcagagcaatttgatcaagtagcccaaaaaccagattttaaactaagaaagactaacaatgacctaaaacagaaggatgcgagctaggaatatta 20078733  T
Q  224 atattgtccctaaa 237  Q
    |||| |||| ||||    
T  20078732 atatggtccttaaa 20078719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 277
Target Start/End: Complemental strand, 23524071 - 23524038
Alignment:
Q  244 atacatgttacaaatatgtttaggatctgtgctg 277  Q
    |||||||||||||||||||||||||| |||||||    
T  23524071 atacatgttacaaatatgtttaggatttgtgctg 23524038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 253
Target Start/End: Original strand, 46381079 - 46381180
Alignment:
Q  152 ccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtccctaaaatggctatacatgt 251  Q
    ||||||| | |||||||||||||||| || ||| ||||| | ||||   ||| || ||||||| |||||||||||| |||| |||| ||| ||| |||||    
T  46381079 ccgaaaaccagatttttgactaagaataactaacaatgatctaaaactgaagaatgagagttatgaagattaatatggtccttaaactggttatccatgt 46381178  T
Q  252 ta 253  Q
    ||    
T  46381179 ta 46381180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 105; Significance: 2e-52; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 120 - 276
Target Start/End: Original strand, 12464998 - 12465154
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    |||| ||||| |||||||||||||||||||| | ||||| ||||||||||||||||||||||||| ||||| |||||| |||||||||||||||| ||||    
T  12464998 ggggtagtttcagagcaatccgatcaagtagtctgaaaacccgatttttgactaagaacaagtaacaatgatccaaaacaaaaggataagagttatgaag 12465097  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgct 276  Q
    ||||||||||||||||||||  |||||||| ||||||||||||||||||| ||||||    
T  12465098 attaatattgtccctaaaataactatacatattacaaatatgtttaggatttgtgct 12465154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 120 - 266
Target Start/End: Complemental strand, 7884435 - 7884289
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||| | |||||| ||||||||||||    
T  7884435 ggggaagtttcggagcaatccgatcaagtagcccgaaaatccgattcttgactaagaacatgtaacaatgacccaaaacagaaggatgagagttaggaag 7884336  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttag 266  Q
    ||||||||||||||||||||| | |||||| ||||||| || |||||    
T  7884335 attaatattgtccctaaaatgacaatacatattacaaacatatttag 7884289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 120 - 277
Target Start/End: Original strand, 4064598 - 4064756
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgaccc-aaaataaaaggataagagttaggaa 218  Q
    ||||||||||  ||||||||| |||||||||||||||||| ||||||||||||||||||| |||| |||||||| |||||| |||||| | |||||||||    
T  4064598 ggggaagtttcggagcaatccaatcaagtagcccgaaaattcgatttttgactaagaacaggtaacaatgacccaaaaatagaaggatgatagttaggaa 4064697  T
Q  219 gattaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    |||||| ||||||||||||||| |||| ||||||||||| |||||||| || |||||||    
T  4064698 gattaacattgtccctaaaatgactatccatgttacaaacatgtttagaatttgtgctg 4064756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 120 - 277
Target Start/End: Complemental strand, 20891855 - 20891698
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||  ||||||||||||||||||||| ||||| |||||||||||||||||| | |||| ||| |||||||| | |||||| ||||||||||||    
T  20891855 ggggaagtttcggagcaatccgatcaagtagcctgaaaacccgatttttgactaagaataggtaacaataacccaaaacagaaggatgagagttaggaag 20891756  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||||||||| ||||||||||| |||| ||||||||||| |||||||| || |||||||    
T  20891755 attaatattatccctaaaatgactatccatgttacaaacatgtttagaatttgtgctg 20891698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 132 - 265
Target Start/End: Original strand, 32841861 - 32841995
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattg-t 230  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||| |||| |||||| ||||||| |||||| |||||||||||||||||||||| |    
T  32841861 gagcaatccgatcaagtagcccgaaaacccgatttttgactacgaacatgtaacaatgactcaaaatagaaggatgagagttaggaagattaatattgtt 32841960  T
Q  231 ccctaaaatggctatacatgttacaaatatgttta 265  Q
    |||||||||| |||| ||||||||||| |||||||    
T  32841961 ccctaaaatgactatccatgttacaaacatgttta 32841995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 132 - 266
Target Start/End: Original strand, 37183672 - 37183806
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    ||||||||||||||||||| | ||||| ||||||||||||||||||||||||| |||||||||||| |||| ||| ||||||||||||||||||||||||    
T  37183672 gagcaatccgatcaagtagtctgaaaacccgatttttgactaagaacaagtaacaatgacccaaaacaaaaagatgagagttaggaagattaatattgtc 37183771  T
Q  232 cctaaaatggctatacatgttacaaatatgtttag 266  Q
    | ||||||| |||| ||||||||||| || |||||    
T  37183772 cataaaatgactatccatgttacaaacatatttag 37183806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 120 - 265
Target Start/End: Original strand, 31221218 - 31221363
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||  ||||||||||||||||||||||||||| ||  ||||| |||||||||| |||| |||||||||||| | || ||| ||||||||||||    
T  31221218 ggggaagtttcggagcaatccgatcaagtagcccgaaaacccagtttttaactaagaacatgtaacaatgacccaaaacagaaagatgagagttaggaag 31221317  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgttta 265  Q
    ||||||||||||||||||||| |||| ||||||||||| |||||||    
T  31221318 attaatattgtccctaaaatgactatccatgttacaaacatgttta 31221363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 132 - 277
Target Start/End: Complemental strand, 38871901 - 38871756
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    |||||||||||| |||||| | ||||| |||||||||||||||||||| |||| |||||||||||| | |||||| |||||||||||||||| |||||||    
T  38871901 gagcaatccgattaagtagtctgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacagaaggatgagagttaggaagattattattgtc 38871802  T
Q  232 cctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||||||||| |||| ||||||||||| |||||||| || |||||||    
T  38871801 cctaaaatgactatccatgttacaaacatgtttagaatttgtgctg 38871756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 132 - 266
Target Start/End: Complemental strand, 6156961 - 6156827
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    |||||||||||||||||||||| |||| ||| ||||| |||||||||| |||| ||||||| |||| | |||||| ||||||||||||||||||||||||    
T  6156961 gagcaatccgatcaagtagcccaaaaacccggtttttaactaagaacatgtaacaatgaccaaaaacagaaggatgagagttaggaagattaatattgtc 6156862  T
Q  232 cctaaaatggctatacatgttacaaatatgtttag 266  Q
    ||||||||| |||| ||||||||||| ||||||||    
T  6156861 cctaaaatgactatccatgttacaaacatgtttag 6156827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 120 - 257
Target Start/End: Complemental strand, 14112107 - 14111972
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||  ||||||||| ||||||||| ||||||| ||||||||||||||||||||||||| ||| |||||||||  |||||| | ||||||||||    
T  14112107 ggggaagtttcggagcaatcctatcaagtagtccgaaaacccgatttttgactaagaacaagtaacaataacccaaaat--aaggatgaaagttaggaag 14112010  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaa 257  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  14112009 attaatattgtccctaaaatgactatccatgttacaaa 14111972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 120 - 266
Target Start/End: Complemental strand, 15957991 - 15957845
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||  ||||||||||||||||||| ||||||| | |||||||||||||||||| |||| |||||||||||| ||||| |  ||||||||||||    
T  15957991 ggggaagtttcggagcaatccgatcaagtagtccgaaaacctgatttttgactaagaacaggtaataatgacccaaaacaaaagaaccagagttaggaag 15957892  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttag 266  Q
    ||||||||||||||||||||  ||||  |||||||||| ||||||||    
T  15957891 attaatattgtccctaaaattactatctatgttacaaacatgtttag 15957845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 132 - 266
Target Start/End: Complemental strand, 39525006 - 39524872
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    |||||||| ||||||||||  |||||| || ||||| |||||||||||||||| |||||||||||| | |||||| |||||||||||||||||||||||     
T  39525006 gagcaatctgatcaagtagttcgaaaacccaattttggactaagaacaagtaacaatgacccaaaacagaaggatgagagttaggaagattaatattgtt 39524907  T
Q  232 cctaaaatggctatacatgttacaaatatgtttag 266  Q
    ||||||||| |||||||| ||||||||||||||||    
T  39524906 cctaaaatgactatacatattacaaatatgtttag 39524872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 120 - 277
Target Start/End: Complemental strand, 33487853 - 33487695
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataa-aaggataagagttaggaa 218  Q
    ||||||||||  ||||||  |||||||||||||||||||  ||||||||||||||||||| |||| ||||||||||||    |||||| |||||||||||    
T  33487853 ggggaagtttcggagcaaatcgatcaagtagcccgaaaactcgatttttgactaagaacatgtaacaatgacccaaaaactgaaggatgagagttaggaa 33487754  T
Q  219 gattaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    |||||||||||||||||||||| |||| ||||||||||| || ||||| || |||||||    
T  33487753 gattaatattgtccctaaaatgactatccatgttacaaacatttttagaatttgtgctg 33487695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 132 - 277
Target Start/End: Complemental strand, 15799455 - 15799310
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    |||||||||| |||||||||||| ||| |||||||||||||||||||| |||| |||||||||||| | ||||||  || ||||||||| ||||||||||    
T  15799455 gagcaatccggtcaagtagcccggaaacccgatttttgactaagaacatgtaacaatgacccaaaacagaaggatgcgaattaggaagaataatattgtc 15799356  T
Q  232 cctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    | ||||||| |||| ||||||||||| |||||||| || |||||||    
T  15799355 cataaaatgactatccatgttacaaacatgtttagaatttgtgctg 15799310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 120 - 265
Target Start/End: Original strand, 31929004 - 31929148
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||  ||||||||||||||||||||||||||| | | ||||| |||||||||| |||| |||||| ||||| | |||||| ||||||||||||    
T  31929004 ggggaagtttcggagcaatccgatcaagtagcccgaaaacctggtttttaactaagaacaggtaacaatgactcaaaacagaaggatgagagttaggaag 31929103  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgttta 265  Q
    ||||||||||| ||||||||| |||| ||||||||||| |||||||    
T  31929104 attaatattgt-cctaaaatgactatccatgttacaaacatgttta 31929148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 132 - 265
Target Start/End: Original strand, 28083269 - 28083402
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    ||||||||||||||||||| |||||||  ||||||||  ||||||||| |||| ||||||| |||| | |||||| | |||||| |||||||||||||||    
T  28083269 gagcaatccgatcaagtagtccgaaaactcgattttttcctaagaacaggtaacaatgaccaaaaacagaaggatgaaagttagaaagattaatattgtc 28083368  T
Q  232 cctaaaatggctatacatgttacaaatatgttta 265  Q
    ||||||||| |||| |||||||||||||||||||    
T  28083369 cctaaaatgactatccatgttacaaatatgttta 28083402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 121 - 277
Target Start/End: Complemental strand, 29862854 - 29862697
Alignment:
Q  121 gggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataa-aaggataagagttaggaag 219  Q
    |||||||||  ||||||||  |||||||||||||||||   |||||||||||||||||| |||| ||||||||||||    |||||| | ||||||||||    
T  29862854 gggaagtttcggagcaatcacatcaagtagcccgaaaacttgatttttgactaagaacaggtaataatgacccaaaaacggaaggatgaaagttaggaag 29862755  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||||||||||||||||||||| |||| ||||||||||| |||||||| || |||||||    
T  29862754 attaatattgtccctaaaatgactatccatgttacaaacatgtttagaatttgtgctg 29862697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 120 - 277
Target Start/End: Original strand, 38692662 - 38692819
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||  ||||||||||| ||||||| ||||||| ||||||||||||||||||   |||| |||||||||||| | || ||| ||||||| |||     
T  38692662 ggggaagtttcggagcaatccgaccaagtagtccgaaaacccgatttttgactaagaatgggtaacaatgacccaaaacagaaagatgagagttatgaat 38692761  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||||||||||||| |||||||  ||| ||||||||||| |||||||| || |||||||    
T  38692762 attaatattgtccttaaaatgattatccatgttacaaacatgtttagaatttgtgctg 38692819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 120 - 263
Target Start/End: Complemental strand, 23269579 - 23269436
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||   |||||||||||||||||||||||||| ||||||||||| ||||||||  |||  || ||||| |||| ||| || ||||||||||||    
T  23269579 ggggaagtttcgaagcaatccgatcaagtagcccgaaaacccgatttttgaataagaacatctaactataacccagaatagaagaatgagagttaggaag 23269480  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtt 263  Q
    ||||||||||||| |||||||  | | ||||||||||| |||||    
T  23269479 attaatattgtccttaaaatgattgttcatgttacaaacatgtt 23269436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 132 - 228
Target Start/End: Original strand, 26898694 - 26898790
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatatt 228  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||  ||| |||||| ||||| | |||||| |||||||||||||||||||||    
T  26898694 gagcaatccgatcaagtagcccgaaaactcgatttttgactaagaacatataacaatgactcaaaacagaaggatgagagttaggaagattaatatt 26898790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 121 - 266
Target Start/End: Original strand, 24203564 - 24203709
Alignment:
Q  121 gggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaaga 220  Q
    |||||||||  ||||||||||||||| |||||||||||  | |||||| |||||||||| |||| ||||| |||||| | |||| | ||||||||||| |    
T  24203564 gggaagtttcggagcaatccgatcaaatagcccgaaaactcaatttttaactaagaacaggtaacaatgatccaaaacagaaggttgagagttaggaaca 24203663  T
Q  221 ttaatattgtccctaaaatggctatacatgttacaaatatgtttag 266  Q
    |||||||||||| |||||||  ||| |  |||||||| ||||||||    
T  24203664 ttaatattgtccttaaaatgattatcccagttacaaacatgtttag 24203709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 120 - 276
Target Start/End: Complemental strand, 38372543 - 38372395
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||  |||| |||||||||||||||||||||| || |||||| |||||||||| |||| ||||||         ||  || ||||||||||||    
T  38372543 ggggaagtttcggagcgatccgatcaagtagcccgaaaacccaatttttaactaagaacatgtaacaatgacg--------aattatgagagttaggaag 38372452  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgct 276  Q
    ||||||||||||||||||||| |||| ||||| ||||| |||||||| || ||||||    
T  38372451 attaatattgtccctaaaatgactatccatgtaacaaacatgtttagaatttgtgct 38372395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 120 - 266
Target Start/End: Complemental strand, 26095334 - 26095188
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||  |||||||| || |||||||||| |||| ||||||||| ||| | ||||   || |||||| ||||||| ||| || ||||||| ||||    
T  26095334 ggggaagtttcggagcaatctgaacaagtagcccaaaaacccgattttttactgaaaacagccaacaatgacacaaaatagaagaatgagagttaagaag 26095235  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttag 266  Q
    ||||||||||||| ||| ||| |||| ||||||||||| ||||||||    
T  26095234 attaatattgtccataatatgactatccatgttacaaacatgtttag 26095188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 230
Target Start/End: Complemental strand, 27212934 - 27212836
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgt 230  Q
    ||||||||| ||||| ||| ||||||| |||||||||||||||||||| |||| |||||| ||||  | |||||| |||||||||||||||||||||||    
T  27212934 gagcaatccaatcaaatagtccgaaaacccgatttttgactaagaacaggtaacaatgactcaaaccagaaggatgagagttaggaagattaatattgt 27212836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 120 - 277
Target Start/End: Complemental strand, 12847685 - 12847528
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    |||||||||| |||| |||  ||||||||||||||||||  |||||||||||||||||||  ||| ||||| |||||| | ||  |  |||||| |||||    
T  12847685 ggggaagtttcagagtaatatgatcaagtagcccgaaaactcgatttttgactaagaacagctaacaatgatccaaaacagaaatacgagagttgggaag 12847586  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||||||||||||| |||||||  |||  |||||||||| ||||| || || |||||||    
T  12847585 attaatattgtccataaaatgattatctatgttacaaacatgttcagaatttgtgctg 12847528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 132 - 265
Target Start/End: Complemental strand, 13908778 - 13908645
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    ||||||||||||||||||| | ||||| | |||||||||| |||||||  ||| |||||| ||||| | |||||| |  |||| ||||||||||||||||    
T  13908778 gagcaatccgatcaagtagtctgaaaacctgatttttgacaaagaacagctaacaatgactcaaaagagaaggatgaaggttaagaagattaatattgtc 13908679  T
Q  232 cctaaaatggctatacatgttacaaatatgttta 265  Q
    | ||||||| |||| | ||||||||| |||||||    
T  13908678 cataaaatgactatccgtgttacaaacatgttta 13908645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 121 - 266
Target Start/End: Original strand, 40619865 - 40620015
Alignment:
Q  121 gggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaa----gaacaagtaagaatgacccaaaataaaagg-ataagagttag 215  Q
    |||||||||  || |||||||| ||||||| ||| ||| |||||||||||||||    ||||| |||| |||||||||||| | |||| || ||||||||    
T  40619865 gggaagtttcggaacaatccgaccaagtagtccggaaacccgatttttgactaattaagaacaggtaacaatgacccaaaacagaagggatgagagttag 40619964  T
Q  216 gaagattaatattgtccctaaaatggctatacatgttacaaatatgtttag 266  Q
    |||||||||||||||||||||||||  | | ||||||||||  ||||||||    
T  40619965 gaagattaatattgtccctaaaatgattgtccatgttacaagcatgtttag 40620015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 206 - 277
Target Start/End: Original strand, 26190263 - 26190334
Alignment:
Q  206 taagagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||||||||||||| ||||| ||| ||| |||||||||||||||||||||||||||||||||||| |||||||    
T  26190263 taagagttaggaatattaaaattatccttaaaatggctatacatgttacaaatatgtttaggatttgtgctg 26190334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 26190201 - 26190267
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaaga 186  Q
    |||||||||| |||||||||||||| ||||| ||||||| |||||||||||||||||||| ||||||    
T  26190201 ggggaagtttcagagcaatccgatctagtagtccgaaaacccgatttttgactaagaacaggtaaga 26190267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 121 - 227
Target Start/End: Complemental strand, 33901200 - 33901094
Alignment:
Q  121 gggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaaga 220  Q
    |||||||||  |||||||| |||||| ||| | |||||||  |||||||||||| ||||| ||| ||||||| |||| | ||||||| ||||||||||||    
T  33901200 gggaagtttcggagcaatctgatcaaatagtctgaaaatcaaatttttgactaaaaacaactaacaatgacctaaaagagaaggatatgagttaggaaga 33901101  T
Q  221 ttaatat 227  Q
    |||||||    
T  33901100 ttaatat 33901094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 132 - 263
Target Start/End: Complemental strand, 27158314 - 27158183
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    |||||||| |||||||||||| ||||| |  |||||| | ||| ||||| ||| ||||||||||||   |||||| ||  |||||||| |||||||||||    
T  27158314 gagcaatctgatcaagtagcctgaaaaccgaattttttattaataacaactaataatgacccaaaagtgaaggatgaggattaggaagcttaatattgtc 27158215  T
Q  232 cctaaaatggctatacatgttacaaatatgtt 263  Q
    | ||||||| |||| |||||| |||| |||||    
T  27158214 cttaaaatgactatccatgtttcaaacatgtt 27158183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 211 - 266
Target Start/End: Original strand, 27494123 - 27494178
Alignment:
Q  211 gttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtttag 266  Q
    |||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||    
T  27494123 gttaggaagattaatattgtccttaaaatgactatccatgttacaaatatgtttag 27494178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 263
Target Start/End: Original strand, 6800818 - 6800949
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    |||||||  ||||||||||  |||||| | ||||||||||||||||||  ||| ||||||| |||| | |||||| ||| | ||||||||||  ||||||    
T  6800818 gagcaatatgatcaagtagttcgaaaaccggatttttgactaagaacatctaacaatgacctaaaacagaaggatgagaatgaggaagattagcattgtc 6800917  T
Q  232 cctaaaatggctatacatgttacaaatatgtt 263  Q
    | ||||||| || | |||||| |||| |||||    
T  6800918 cttaaaatgactgtccatgttgcaaacatgtt 6800949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 232
Target Start/End: Complemental strand, 26622350 - 26622242
Alignment:
Q  122 ggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagat 221  Q
    ||||||||  |||||||| |||||||||| ||||||| | ||||||||||||  ||||| ||| ||| ||| |||||| |||||| | |||||||||| |    
T  26622350 ggaagtttcggagcaatctgatcaagtagtccgaaaaccggatttttgacta--aacaactaacaataacctaaaatagaaggatgaaagttaggaagtt 26622253  T
Q  222 taatattgtcc 232  Q
    |||||| ||||    
T  26622252 taatatggtcc 26622242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 263
Target Start/End: Original strand, 8739148 - 8739210
Alignment:
Q  201 aaggataagagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtt 263  Q
    |||||| ||||||||||||||||||||||||| ||||||| |||  ||||||||||| |||||    
T  8739148 aaggatgagagttaggaagattaatattgtccttaaaatgactacccatgttacaaacatgtt 8739210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 263
Target Start/End: Complemental strand, 16429443 - 16429381
Alignment:
Q  201 aaggataagagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtt 263  Q
    ||||||||||||| |||||||||||||||||| ||||| | |||| ||||||||||| |||||    
T  16429443 aaggataagagtttggaagattaatattgtccttaaaacgactattcatgttacaaacatgtt 16429381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 263
Target Start/End: Original strand, 28445169 - 28445231
Alignment:
Q  201 aaggataagagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtt 263  Q
    |||||| ||||||||||||||||||||||||| ||||| | | |||||||||||||| |||||    
T  28445169 aaggatgagagttaggaagattaatattgtccttaaaacgaccatacatgttacaaacatgtt 28445231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 257
Target Start/End: Original strand, 41639385 - 41639509
Alignment:
Q  136 aatccgatcaagtagcccgaaaatccgatttttg---actaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtcc 232  Q
    |||| |||||||||||| ||||||| |||||||    ||||||||||| ||| ||||||| |||| |||| ||| ||||||||| | ||||||||||||     
T  41639385 aatctgatcaagtagcctgaaaatcagatttttttttactaagaacaactaacaatgacctaaaacaaaaagatgagagttagggaaattaatattgtca 41639484  T
Q  233 ctaaaatggctatacatgttacaaa 257  Q
     |||| ||| |||  ||||||||||    
T  41639485 ttaaactggttatctatgttacaaa 41639509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 7036758 - 7036677
Alignment:
Q  142 atcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagatta 223  Q
    ||||| ||||||||||||| ||||||| |||  ||||||  || ||||||| || ||| |||||||||||||||||||||||    
T  7036758 atcaaatagcccgaaaatcagatttttaactgtgaacaaccaacaatgacctaatatagaaggataagagttaggaagatta 7036677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 263
Target Start/End: Original strand, 8738938 - 8739007
Alignment:
Q  194 aaaataaaaggataagagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtt 263  Q
    |||||| | |||| ||||||||||||||||||||||| | ||||||| |||| ||||||||||| |||||    
T  8738938 aaaatacagggatgagagttaggaagattaatattgttcttaaaatgactatccatgttacaaacatgtt 8739007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 263
Target Start/End: Complemental strand, 21070534 - 21070465
Alignment:
Q  194 aaaataaaaggataagagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtt 263  Q
    |||||||| |||| || |||| ||||||||||||||||| ||||||| ||||  ||||||||||||||||    
T  21070534 aaaataaatggatgagggttatgaagattaatattgtccttaaaatgactatctatgttacaaatatgtt 21070465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 263
Target Start/End: Original strand, 40613556 - 40613697
Alignment:
Q  122 ggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagat 221  Q
    ||||||||  |||||||| ||||||||||| | ||||   ||||||| ||||||||||  ||  ||||||| || | | |||||| | ||||||||||||    
T  40613556 ggaagtttcggagcaatctgatcaagtagctcaaaaactggatttttaactaagaacagttagcaatgacctaatacataaggatgaaagttaggaagat 40613655  T
Q  222 taatattgtccctaaaatggctatacatgttacaaatatgtt 263  Q
    ||||| ||||| ||||||   ||| ||||||||||| |||||    
T  40613656 taataatgtccttaaaataattatccatgttacaaacatgtt 40613697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 263
Target Start/End: Original strand, 8973569 - 8973631
Alignment:
Q  201 aaggataagagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtt 263  Q
    |||||| |||||||||||| |||||||||||| |||||||  ||| ||||||||||| |||||    
T  8973569 aaggatgagagttaggaaggttaatattgtccttaaaatgattatccatgttacaaacatgtt 8973631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 277
Target Start/End: Complemental strand, 25747168 - 25747110
Alignment:
Q  219 gattaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||||||| |||||||||||||| |||| ||||||||||| |||||||| || |||||||    
T  25747168 gattaatgttgtccctaaaatgactatccatgttacaaacatgtttagaatttgtgctg 25747110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 210 - 263
Target Start/End: Complemental strand, 34530367 - 34530314
Alignment:
Q  210 agttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtt 263  Q
    ||||||||||||||||||||||| ||||||| |||  ||||||||||| |||||    
T  34530367 agttaggaagattaatattgtccttaaaatgactaaccatgttacaaacatgtt 34530314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 266
Target Start/End: Complemental strand, 16429240 - 16429168
Alignment:
Q  194 aaaataaaaggataagagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtttag 266  Q
    |||||| |||||| ||||||| |||||||| |||| ||  ||||||| |||| ||||||||||| ||||||||    
T  16429240 aaaatacaaggatgagagttatgaagattagtattatcattaaaatgactatccatgttacaaacatgtttag 16429168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 28445381 - 28445427
Alignment:
Q  217 aagattaatattgtccctaaaatggctatacatgttacaaatatgtt 263  Q
    |||||||||||||||| ||||||| |||| ||||||||||| |||||    
T  28445381 aagattaatattgtccttaaaatgactatccatgttacaaacatgtt 28445427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 38641083 - 38641033
Alignment:
Q  213 taggaagattaatattgtccctaaaatggctatacatgttacaaatatgtt 263  Q
    |||||||||||||||||||| ||||||| ||||  |||||||||| |||||    
T  38641083 taggaagattaatattgtccttaaaatgactatctatgttacaaacatgtt 38641033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 257
Target Start/End: Complemental strand, 41253530 - 41253405
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    |||||||| |||||||| ||||| || |  ||||||| | || |||||| ||| ||||||| |||| |  ||||| | |||||||||||||||||| ||     
T  41253530 gagcaatctgatcaagtggcccggaatttggattttttattaggaacaactaacaatgacctaaaacaggaggatgatagttaggaagattaatatggta 41253431  T
Q  232 cctaaaatggctatacatgttacaaa 257  Q
    | |||| | | ||| |||||||||||    
T  41253430 cttaaattcgttattcatgttacaaa 41253405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 4e-47; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 120 - 267
Target Start/End: Original strand, 21514910 - 21515057
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||  | |||||| ||||||||||||    
T  21514910 ggggaagtttcggagcaatccgatcaagtagtccgaaaatccgatttttgactaagaacaggtaacaatgacccaaaggagaaggatgagagttaggaag 21515009  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttagg 267  Q
    ||||||||||||||||||||| |||| ||||||||||| || ||||||    
T  21515010 attaatattgtccctaaaatgactatccatgttacaaacatatttagg 21515057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 122 - 277
Target Start/End: Original strand, 4508183 - 4508338
Alignment:
Q  122 ggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagat 221  Q
    ||||||||  ||||||||| ||||||||||||||||| |||||||||||||||||||| |||| |||||||||||| | |||||| | ||||||||||||    
T  4508183 ggaagtttcggagcaatccaatcaagtagcccgaaaacccgatttttgactaagaacatgtaacaatgacccaaaacagaaggatgaaagttaggaagat 4508282  T
Q  222 taatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||||||||||||||||||| |||| ||| ||||||| |||||||| || |||||||    
T  4508283 taatattgtccctaaaatgactatccatattacaaacatgtttagaatttgtgctg 4508338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 124 - 277
Target Start/End: Complemental strand, 5639138 - 5638985
Alignment:
Q  124 aagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagatta 223  Q
    |||||| ||||||||| || ||||||||||| ||| ||||||||||| |||||||| |||| |||||| ||||| |||||||||||||||| ||||||||    
T  5639138 aagtttcagagcaatctgaccaagtagcccggaaacccgatttttgattaagaacaggtaacaatgactcaaaacaaaaggataagagttaagaagatta 5639039  T
Q  224 atattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    |||||||||||| |||||||||| |||||||| | ||||||| ||| |||||||    
T  5639038 atattgtccctagaatggctatatatgttacagacatgtttatgatatgtgctg 5638985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 120 - 266
Target Start/End: Original strand, 2813103 - 2813250
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataa-aaggataagagttaggaa 218  Q
    ||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||    |||||| |||||||||||    
T  2813103 ggggaagtttcggagcaatccgatcaagtagcccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaaacggaaggatgagagttaggaa 2813202  T
Q  219 gattaatattgtccctaaaatggctatacatgttacaaatatgtttag 266  Q
    |||||||||| ||| ||||||| |||| ||||||| ||||||||||||    
T  2813203 gattaatattatccataaaatgactattcatgttaaaaatatgtttag 2813250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 120 - 277
Target Start/End: Complemental strand, 23407077 - 23406919
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataa-aaggataagagttaggaa 218  Q
    ||||||||||  ||||||||  |||||||||||||||||   ||||||||||||||||||||||| ||||||||||||    |||||| |||||||||||    
T  23407077 ggggaagtttcggagcaatcaaatcaagtagcccgaaaacttgatttttgactaagaacaagtaataatgacccaaaaacggaaggatgagagttaggaa 23406978  T
Q  219 gattaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    |||||||||||||||||||||| |||| ||||||||||| |||||||| || |||||||    
T  23406977 gattaatattgtccctaaaatgactatccatgttacaaacatgtttagaatttgtgctg 23406919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 133 - 275
Target Start/End: Original strand, 14587452 - 14587594
Alignment:
Q  133 agcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtcc 232  Q
    |||||||| |||||||||||| |||||||  ||||| |||||||||| |||| |||||||||||| | |||||| |||||||||||||||||||||||||    
T  14587452 agcaatccaatcaagtagcccaaaaatccatttttttactaagaacatgtaacaatgacccaaaacataaggattagagttaggaagattaatattgtcc 14587551  T
Q  233 ctaaaatggctatacatgttacaaatatgtttaggatctgtgc 275  Q
     ||||||| |||| ||||||||||| |||||||| || |||||    
T  14587552 gtaaaatgactatccatgttacaaacatgtttagaatttgtgc 14587594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 134 - 275
Target Start/End: Original strand, 1945423 - 1945564
Alignment:
Q  134 gcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtccc 233  Q
    ||||||||||||| || |||||||||||||||||||| ||| |||| |||| |||| ||||||| | |||||| ||||||||||||||||||||| ||||    
T  1945423 gcaatccgatcaaataacccgaaaatccgatttttgaataaaaacaggtaacaatgtcccaaaacagaaggatgagagttaggaagattaatattatccc 1945522  T
Q  234 taaaatggctatacatgttacaaatatgtttaggatctgtgc 275  Q
    ||||||| |||| ||||||||||| |||||||| || |||||    
T  1945523 taaaatgactatccatgttacaaacatgtttagaatttgtgc 1945564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 122 - 277
Target Start/End: Complemental strand, 29519557 - 29519402
Alignment:
Q  122 ggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagat 221  Q
    ||||||||  |||||||  ||||||||||| |||||| |||||||||||| ||||||| |||| |||||||||||||| |||||| | ||||||||||||    
T  29519557 ggaagtttcggagcaatttgatcaagtagctcgaaaacccgatttttgaccaagaacacgtaacaatgacccaaaatagaaggatgatagttaggaagat 29519458  T
Q  222 taatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||||||| ||| ||||||| | || ||||||||||| |||||||| || |||||||    
T  29519457 taatattttccataaaatgacaattcatgttacaaacatgtttagaatttgtgctg 29519402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 144 - 245
Target Start/End: Complemental strand, 32044638 - 32044537
Alignment:
Q  144 caagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtccctaaaatggct 243  Q
    ||||||||||||||| | |||||||||||||||||| |||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||    
T  32044638 caagtagcccgaaaacctgatttttgactaagaacaggtaacaatgatccaaaacaaaaggataagagttaggaagattaatattgtccctaaaatgact 32044539  T
Q  244 at 245  Q
    ||    
T  32044538 at 32044537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 141 - 277
Target Start/End: Original strand, 24604261 - 24604397
Alignment:
Q  141 gatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtccctaaaatg 240  Q
    ||||||||||||| |||| |||||||||||||||||||| |||| |||||| ||||| | |||||| | |||||||||||||||||||||| ||||||||    
T  24604261 gatcaagtagcccaaaaacccgatttttgactaagaacaggtaacaatgactcaaaacagaaggatgaaagttaggaagattaatattgtctctaaaatg 24604360  T
Q  241 gctatacatgttacaaatatgtttaggatctgtgctg 277  Q
     ||||   |||||||||||||||||| || |||||||    
T  24604361 actatctttgttacaaatatgtttagaatttgtgctg 24604397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 132 - 263
Target Start/End: Complemental strand, 2539719 - 2539588
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    ||||||||||||||||||| |||||||  || ||||| |||| ||| | |||| |||||||||||| | |||||| ||||||||||||||||||||||||    
T  2539719 gagcaatccgatcaagtagtccgaaaactcggtttttaactacgaataggtaacaatgacccaaaacagaaggatgagagttaggaagattaatattgtc 2539620  T
Q  232 cctaaaatggctatacatgttacaaatatgtt 263  Q
    ||||||||| |||| ||||||||||| |||||    
T  2539619 cctaaaatgactatccatgttacaaacatgtt 2539588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 132 - 266
Target Start/End: Original strand, 3717173 - 3717308
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgaccc-aaaataaaaggataagagttaggaagattaatattgt 230  Q
    ||||||||||||||||||| | ||||| |||||||||||||||||||| |||| |||||||| |||| | |||||| |||||||| || |||||||||||    
T  3717173 gagcaatccgatcaagtagtctgaaaacccgatttttgactaagaacatgtaacaatgacccaaaaacagaaggatgagagttagaaaaattaatattgt 3717272  T
Q  231 ccctaaaatggctatacatgttacaaatatgtttag 266  Q
    |||||||||| |||| ||||||||| | ||||||||    
T  3717273 ccctaaaatgactatccatgttacagacatgtttag 3717308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 120 - 266
Target Start/End: Complemental strand, 5699846 - 5699699
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgaccc-aaaataaaaggataagagttaggaa 218  Q
    ||||||||||  ||||||||||||||||||| ||||||  |||||||||||||||||| | |||| |||||||| |||| | |||||| ||||||| |||    
T  5699846 ggggaagtttcggagcaatccgatcaagtagtccgaaatcccgatttttgactaagaataggtaacaatgacccaaaaacagaaggatgagagttatgaa 5699747  T
Q  219 gattaatattgtccctaaaatggctatacatgttacaaatatgtttag 266  Q
    |||||||||||||| ||||||| |||| ||||||||||| || |||||    
T  5699746 gattaatattgtccttaaaatgactatccatgttacaaacatatttag 5699699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 123 - 265
Target Start/End: Complemental strand, 9905392 - 9905249
Alignment:
Q  123 gaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagatt 222  Q
    |||||||  ||||||||||||||||||||||||||| ||||||||||||||||||   |||| |||||| ||||| | |||||||||||| ||||| |||    
T  9905392 gaagtttcggagcaatccgatcaagtagcccgaaaacccgatttttgactaagaattggtaacaatgactcaaaacagaaggataagagtaaggaaaatt 9905293  T
Q  223 aatattg-tccctaaaatggctatacatgttacaaatatgttta 265  Q
    ||||||| |||||||||||  ||| ||||||||||| |||||||    
T  9905292 aatattgttccctaaaatgattatccatgttacaaacatgttta 9905249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 120 - 277
Target Start/End: Complemental strand, 17264690 - 17264533
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||  ||||||||| |||||||||||| ||||  | |||||| |||||||||| |||| |||||| ||||| | |||||| ||||||||||||    
T  17264690 ggggaagtttcggagcaatcccatcaagtagcccaaaaactcaatttttaactaagaacaggtaacaatgacgcaaaacagaaggatgagagttaggaag 17264591  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    || |||||||||||||||||| |||  |||||| |||| |||||||| || |||||||    
T  17264590 ataaatattgtccctaaaatgactaaccatgttgcaaacatgtttagaatttgtgctg 17264533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 132 - 266
Target Start/End: Original strand, 13800918 - 13801052
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    |||||||||||||||||||  | |||||||||||||||||||||||||| ||| |||||||||||| | || ||| |||||||||||||||||||||||     
T  13800918 gagcaatccgatcaagtagttcaaaaatccgatttttgactaagaacaactaacaatgacccaaaacataatgatgagagttaggaagattaatattgtt 13801017  T
Q  232 cctaaaatggctatacatgttacaaatatgtttag 266  Q
    | |||||||   ||  |||||||||| ||||||||    
T  13801018 cataaaatgataatctatgttacaaacatgtttag 13801052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 263
Target Start/End: Complemental strand, 34528718 - 34528577
Alignment:
Q  122 ggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagat 221  Q
    ||||||||| ||||||||||||||||||| ||||||| | ||||||||||||||||||  ||| |||||||||||| | ||| || |||||||| |||||    
T  34528718 ggaagttttggagcaatccgatcaagtagaccgaaaaccagatttttgactaagaacagctaataatgacccaaaacagaagaatgagagttagaaagat 34528619  T
Q  222 taatattgtccctaaaatggctatacatgttacaaatatgtt 263  Q
    ||||||| ||| | |||||  ||| ||||||||||| |||||    
T  34528618 taatattatccttgaaatgaatatccatgttacaaacatgtt 34528577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 136 - 266
Target Start/End: Original strand, 7734221 - 7734351
Alignment:
Q  136 aatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtcccta 235  Q
    |||| |||||||||||||||||| | |||||||||  |||||||  ||| ||||| |||||| |||||||| | ||||||||||||||||||||||| ||    
T  7734221 aatctgatcaagtagcccgaaaacctgatttttgatcaagaacagataacaatgatccaaaacaaaaggatgatagttaggaagattaatattgtccata 7734320  T
Q  236 aaatggctatacatgttacaaatatgtttag 266  Q
    ||||| | || | ||||||||| ||||||||    
T  7734321 aaatgacaattcgtgttacaaacatgtttag 7734351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 120 - 239
Target Start/End: Original strand, 29289504 - 29289623
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||  |||||||  ||||||||||| |||||| | ||||||||||||||||||  ||| ||||||| |||| | ||||||  ||||||||||     
T  29289504 ggggaagtttcggagcaatttgatcaagtagcacgaaaacctgatttttgactaagaacatctaacaatgacctaaaacagaaggatgcgagttaggaaa 29289603  T
Q  220 attaatattgtccctaaaat 239  Q
    ||||||||||||| ||||||    
T  29289604 attaatattgtccataaaat 29289623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 133 - 259
Target Start/End: Complemental strand, 16450481 - 16450355
Alignment:
Q  133 agcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtcc 232  Q
    ||||||| ||||||||||||| |||| |  |||||||||||||||||  ||| ||||||| |||| | || ||| ||| ||||||||||||||||  |||    
T  16450481 agcaatctgatcaagtagcccaaaaaccaaatttttgactaagaacagctaacaatgacctaaaacataatgatgagatttaggaagattaatatgttcc 16450382  T
Q  233 ctaaaatggctatacatgttacaaata 259  Q
     |||| ||| ||| |||||||||||||    
T  16450381 ttaaactggttatccatgttacaaata 16450355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 259
Target Start/End: Original strand, 6704009 - 6704144
Alignment:
Q  123 gaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagatt 222  Q
    ||||||| ||||||||| |||||| ||| ||||||| | |||||||||| |  ||||  ||| ||||||| |||||  || ||| |||||||||||||||    
T  6704009 gaagtttcagagcaatctgatcaaatagtccgaaaaccggatttttgac-attaacagctaacaatgacctaaaatcgaatgatgagagttaggaagatt 6704107  T
Q  223 aatattgtccctaaaatggctatacatgttacaaata 259  Q
    |||||||||| |||| | | ||| |||||||||||||    
T  6704108 aatattgtccttaaactagttatccatgttacaaata 6704144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 124 - 263
Target Start/End: Complemental strand, 237069 - 236931
Alignment:
Q  124 aagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagatta 223  Q
    |||||| |||||||||||||||| || || ||| ||  | |||| |||| | ||||| ||| ||||||| |||||| || ||| ||||||||||||||||    
T  237069 aagtttcagagcaatccgatcaaataacctgaatattgg-ttttcgactgaaaacaactaacaatgacctaaaatagaacgatgagagttaggaagatta 236971  T
Q  224 atattgtccctaaaatggctatacatgttacaaatatgtt 263  Q
    |||| |||| |||||||  | | ||||||||||| |||||    
T  236970 atatggtccttaaaatgattttccatgttacaaacatgtt 236931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 163
Target Start/End: Original strand, 33413365 - 33413408
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccga 163  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  33413365 ggggaagtttcagagcaatccgatcaagtagcccgaaaatccga 33413408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 257
Target Start/End: Original strand, 14037845 - 14037978
Alignment:
Q  121 gggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaaga 220  Q
    |||| ||||| |||||||| ||||||||||| ||||||   ||||||||||||||||||| ||| ||||||| |||| | ||||||    |||| |||||    
T  14037845 gggatgttttggagcaatctgatcaagtagcacgaaaactagatttttgactaagaacaactaacaatgacctaaaacagaaggat---ggttaagaaga 14037941  T
Q  221 ttaatattgtccctaaaatggctatacatgttacaaa 257  Q
    ||||||| |||  ||||  || ||| |||||||||||    
T  14037942 ttaatatggtctttaaacaggttatccatgttacaaa 14037978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 257
Target Start/End: Complemental strand, 3365933 - 3365808
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    |||||||  ||||||||| || ||||| | ||||||||| |  |||||| ||| ||||||| |||| | |||||| | ||||||||||||||||||  ||    
T  3365933 gagcaatatgatcaagtaacctgaaaaccggatttttgagtgtgaacaattaacaatgacctaaaacagaaggatgaaagttaggaagattaatatgttc 3365834  T
Q  232 cctaaaatggctatacatgttacaaa 257  Q
    | |||| | | ||| |||||||||||    
T  3365833 cttaaacttgttatccatgttacaaa 3365808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 237
Target Start/End: Original strand, 10310311 - 10310427
Alignment:
Q  121 gggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaaga 220  Q
    |||||||||  || ||||| || |||||||||  |||||  ||||||||||| ||||||| | | ||| ||| |||||| ||| || | |||||||||||    
T  10310311 gggaagtttcggaacaatctgaccaagtagcctaaaaattggatttttgactgagaacaacttacaataacctaaaatagaagaatgatagttaggaaga 10310410  T
Q  221 ttaatattgtccctaaa 237  Q
    ||||||| |||| ||||    
T  10310411 ttaatatggtccttaaa 10310427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 17501054 - 17501003
Alignment:
Q  212 ttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtt 263  Q
    ||||||||||||||| ||||| ||||||| |||| ||||||||||| |||||    
T  17501054 ttaggaagattaataatgtccttaaaatgactattcatgttacaaacatgtt 17501003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 277
Target Start/End: Complemental strand, 32035266 - 32035231
Alignment:
Q  242 ctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    |||||||||||||||||||||||||||| |||||||    
T  32035266 ctatacatgttacaaatatgtttaggatttgtgctg 32035231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 179
Target Start/End: Complemental strand, 7413028 - 7412971
Alignment:
Q  122 ggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaaca 179  Q
    ||||||||  ||||||||||||||| ||| ||||||| | |||||||| |||||||||    
T  7413028 ggaagtttcggagcaatccgatcaactagtccgaaaacctgatttttggctaagaaca 7412971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 120 - 265
Target Start/End: Complemental strand, 140765 - 140620
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||  ||||||||||||||||||| | ||||| ||||||||||||||||||||||||| ||||||| |||| |||||||| ||||||||||||    
T  140765 ggggaagtttcggagcaatccgatcaagtagtctgaaaacccgatttttgactaagaacaagtaacaatgacctaaaacaaaaggatgagagttaggaag 140666  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgttta 265  Q
    ||||||||||||||||||||| ||||  |||||||||| |||||||    
T  140665 attaatattgtccctaaaatgactatcaatgttacaaacatgttta 140620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 2e-43; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 120 - 257
Target Start/End: Original strand, 32187743 - 32187880
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||  ||||||||||||||||||| ||||||| |||||||||||| ||||||| |||| |||||||||||| | |||||| ||||||||||||    
T  32187743 ggggaagtttcggagcaatccgatcaagtagtccgaaaacccgatttttgaccaagaacaggtaacaatgacccaaaacagaaggatgagagttaggaag 32187842  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaa 257  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  32187843 attaatattgtccctaaaatgactatccatgttacaaa 32187880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 152 - 277
Target Start/End: Original strand, 36948851 - 36948976
Alignment:
Q  152 ccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtccctaaaatggctatacatgt 251  Q
    ||||||| || ||||||||||||||||| |||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  36948851 ccgaaaacccaatttttgactaagaacaggtaacaattacccaaaacaaaaggataagagttaggaagattaatattgtccctaaaatagctatacatgt 36948950  T
Q  252 tacaaatatgtttaggatctgtgctg 277  Q
    || ||||||||||||||| |||||||    
T  36948951 tataaatatgtttaggatttgtgctg 36948976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 121 - 266
Target Start/End: Original strand, 41510304 - 41510448
Alignment:
Q  121 gggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaaga 220  Q
    |||||||||  ||||||||||||||||||||||||||| ||  ||||| ||||||||||||||| |||||||||||| | |||||| |||||||||||||    
T  41510304 gggaagtttcggagcaatccgatcaagtagcccgaaaacccagtttttaactaagaacaagtaacaatgacccaaaacagaaggatgagagttaggaaga 41510403  T
Q  221 ttaatattgtccctaaaatggctatacatgttacaaatatgtttag 266  Q
    |||||||||||||||||||| |||| ||||||||||| ||||||||    
T  41510404 ttaatattgtccctaaaatgactat-catgttacaaacatgtttag 41510448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 121 - 277
Target Start/End: Complemental strand, 39447441 - 39447285
Alignment:
Q  121 gggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaaga 220  Q
    ||||||||| ||||||||||||||||| || | ||| | |||||||||||||||||||| |||| |||||||||||||| |||||| |||||||||||||    
T  39447441 gggaagtttcagagcaatccgatcaagcagtcggaagacccgatttttgactaagaacatgtaacaatgacccaaaatagaaggatgagagttaggaaga 39447342  T
Q  221 ttaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    |||||||||||  ||||||| |||| ||||||||||| |||||||| || |||||||    
T  39447341 ttaatattgtctttaaaatgactatccatgttacaaacatgtttagaatttgtgctg 39447285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 120 - 265
Target Start/End: Original strand, 41203060 - 41203205
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||  ||||||||||||||||| |||||||||||| |||||| |||||||||| |||| |||||||||||| | |||||| | ||||||||||    
T  41203060 ggggaagtttcggagcaatccgatcaagttgcccgaaaatccaatttttaactaagaacaggtaacaatgacccaaaacagaaggatgaaagttaggaag 41203159  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgttta 265  Q
    ||||||||||||| ||||||| |||| ||||||||||| |||||||    
T  41203160 attaatattgtccataaaatgactatccatgttacaaacatgttta 41203205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 120 - 277
Target Start/End: Complemental strand, 42894657 - 42894500
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||  ||| ||||||||||||||| |||||||  ||||||||| ||||||||| |||| |||||||||||| | |||||  ||||||||||||    
T  42894657 ggggaagtttcggagtaatccgatcaagtagtccgaaaactcgatttttgcctaagaacatgtaacaatgacccaaaacagaaggaagagagttaggaag 42894558  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    |||||||||||||||||||||  ||| ||||||| ||| |||||||| || |||||||    
T  42894557 attaatattgtccctaaaatgattatccatgttagaaacatgtttagaatttgtgctg 42894500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 132 - 276
Target Start/End: Original strand, 33452329 - 33452473
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    ||||||||||||||||||| ||  ||| ||||||||||||||||||||  ||| || ||||||||| ||||| || ||||||||||||||||||||||||    
T  33452329 gagcaatccgatcaagtagtccagaaacccgatttttgactaagaacagataacaaagacccaaaacaaaagaatgagagttaggaagattaatattgtc 33452428  T
Q  232 cctaaaatggctatacatgttacaaatatgtttaggatctgtgct 276  Q
    |||||||||  ||| ||||||||||| |||||||| || ||||||    
T  33452429 cctaaaatgattatccatgttacaaacatgtttagaatttgtgct 33452473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 120 - 266
Target Start/End: Original strand, 15994987 - 15995133
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||  ||||||||||||||| ||| | |||||||| |||||| |||||||||| |||| |||||||||||| | || ||| |||||||| |||    
T  15994987 ggggaagtttcggagcaatccgatcaaatagtctgaaaatccaattttttactaagaacatgtaacaatgacccaaaacagaatgatgagagttagaaag 15995086  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttag 266  Q
    ||||||||||||| ||||||| |||| ||||||||||| ||||||||    
T  15995087 attaatattgtccataaaatgactatccatgttacaaacatgtttag 15995133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 132 - 276
Target Start/End: Original strand, 25217660 - 25217805
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgaccc-aaaataaaaggataagagttaggaagattaatattgt 230  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||| |||| |||||||| |||| | |||||  ||||||||||||||||| |||||    
T  25217660 gagcaatccgatcaagtagcccgaaaacccgattttttactaagaacaggtaacaatgacccaaaaacagaaggaagagagttaggaagattaaaattgt 25217759  T
Q  231 ccctaaaatggctatacatgttacaaatatgtttaggatctgtgct 276  Q
    ||| |||||| |||| |||| |||||| |||||||| || ||||||    
T  25217760 ccccaaaatgactatccatgctacaaacatgtttagaatttgtgct 25217805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 120 - 245
Target Start/End: Original strand, 41854778 - 41854903
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    |||||||||| ||||||||||||||||||||||| |||||||| ||||| ||||||||||  ||| |||||| ||||| | |||||| ||||||||||||    
T  41854778 ggggaagtttcagagcaatccgatcaagtagcccaaaaatccggtttttaactaagaacagataacaatgactcaaaacagaaggatgagagttaggaag 41854877  T
Q  220 attaatattgtccctaaaatggctat 245  Q
    ||||||||||||||| ||||| ||||    
T  41854878 attaatattgtccctgaaatgactat 41854903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 123 - 257
Target Start/End: Original strand, 19109892 - 19110026
Alignment:
Q  123 gaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagatt 222  Q
    |||||||  ||||||||||||||||||| || ||||   ||||||||||||||||||  ||| ||||||||||||||||||||| |||||||||||||||    
T  19109892 gaagtttcggagcaatccgatcaagtagtccaaaaactggatttttgactaagaacagctaacaatgacccaaaataaaaggatgagagttaggaagatt 19109991  T
Q  223 aatattgtccctaaaatggctatacatgttacaaa 257  Q
    |||||| ||| ||||||| | || |||||||||||    
T  19109992 aatattatccttaaaatgacgatccatgttacaaa 19110026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 120 - 277
Target Start/End: Complemental strand, 5507699 - 5507542
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||  ||||||||||||||||| ||||||||| | |||||||||||||||||| |||  |||||||||||| | ||| || ||||||  ||||    
T  5507699 ggggaagtttcggagcaatccgatcaagttgcccgaaaacctgatttttgactaagaacaggtagcaatgacccaaaacagaagaatgagagttgtgaag 5507600  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    |||||||||||   ||||||| |||| ||||||||||| |||||||| || |||||||    
T  5507599 attaatattgtttataaaatgactatccatgttacaaacatgtttagaatttgtgctg 5507542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 152 - 277
Target Start/End: Original strand, 44465633 - 44465758
Alignment:
Q  152 ccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtccctaaaatggctatacatgt 251  Q
    ||||||| | |||||||||||||||| | |||| |||||||||||| | |||||| ||||||||||||||||||||||||||||||||| |||  |||||    
T  44465633 ccgaaaacctgatttttgactaagaagaggtaacaatgacccaaaacagaaggatgagagttaggaagattaatattgtccctaaaatgactaaccatgt 44465732  T
Q  252 tacaaatatgtttaggatctgtgctg 277  Q
    |||||| |||||||| || |||||||    
T  44465733 tacaaacatgtttagaatttgtgctg 44465758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 135 - 257
Target Start/End: Original strand, 16750318 - 16750439
Alignment:
Q  135 caatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtccct 234  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||  ||| |||||||||||| | |||||| ||||||| ||||||||||||||| |||    
T  16750318 caatccgatcaagtagtccgaaaatccgattttttactaagaacagataacaatgacccaaaacagaaggatgagagtta-gaagattaatattgttcct 16750416  T
Q  235 aaaatggctatacatgttacaaa 257  Q
    |||||| |||| ||| |||||||    
T  16750417 aaaatgactatccatattacaaa 16750439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 132 - 266
Target Start/End: Complemental strand, 36875253 - 36875119
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    ||||||| |||| |||||| | ||||| |||||||||| ||||||||  |||| |||||||||||| | |||||| ||||||||||||||||||||| ||    
T  36875253 gagcaattcgattaagtagtctgaaaacccgatttttgcctaagaacgggtaacaatgacccaaaacagaaggatgagagttaggaagattaatattatc 36875154  T
Q  232 cctaaaatggctatacatgttacaaatatgtttag 266  Q
    ||||||||| |||| |||||||||||  |||||||    
T  36875153 cctaaaatgactatccatgttacaaacttgtttag 36875119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 132 - 277
Target Start/End: Complemental strand, 34517369 - 34517224
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    ||||||||||||||||||  ||||||| || ||||||||||||||||| |||| |||||||||||| |||||||| | ||||| || ||||||||||||     
T  34517369 gagcaatccgatcaagtattccgaaaacccaatttttgactaagaacaggtaacaatgacccaaaacaaaaggatgaaagttatgatgattaatattgtt 34517270  T
Q  232 cctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    | ||||||| |||| ||||||||  | |||||||| || |||||||    
T  34517269 cataaaatgactatccatgttaccgacatgtttagaatttgtgctg 34517224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 132 - 257
Target Start/End: Complemental strand, 35251198 - 35251073
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtc 231  Q
    |||||||| |||||||||||||||||| | |||||| |||||||||||| ||| ||||||| |||||| ||||||| |||||| |||||||||||| |||    
T  35251198 gagcaatctgatcaagtagcccgaaaaccggattttcgactaagaacaactaacaatgacctaaaatagaaggataggagttaagaagattaatatggtc 35251099  T
Q  232 cctaaaatggctatacatgttacaaa 257  Q
    | |||| ||||||| ||| |||||||    
T  35251098 cttaaactggctatccatattacaaa 35251073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 122 - 245
Target Start/End: Complemental strand, 30763927 - 30763804
Alignment:
Q  122 ggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagat 221  Q
    ||||||||  ||||||||||||||||| |||| |||||| ||||||||||||||||||  ||| ||||||| |||| | || ||| ||||||||||||||    
T  30763927 ggaagtttcggagcaatccgatcaagttgcccaaaaatcagatttttgactaagaacagctaacaatgaccaaaaacagaaagatgagagttaggaagat 30763828  T
Q  222 taatattgtccctaaaatggctat 245  Q
    ||||||||||| ||||||| ||||    
T  30763827 taatattgtccataaaatgactat 30763804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 163 - 265
Target Start/End: Original strand, 45153708 - 45153810
Alignment:
Q  163 atttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgt 262  Q
    ||||| ||||||||||| |||| |||||||||||| | |||||| ||||||| ||||||||||||||||||||||||| |||| ||||||||||| ||||    
T  45153708 attttggactaagaacaggtaacaatgacccaaaacagaaggatgagagttaagaagattaatattgtccctaaaatgactatccatgttacaaacatgt 45153807  T
Q  263 tta 265  Q
    |||    
T  45153808 tta 45153810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 142 - 277
Target Start/End: Complemental strand, 8388909 - 8388774
Alignment:
Q  142 atcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtccctaaaatgg 241  Q
    |||||||||| |||||| |||||||| |||||||||||   || ||||||||||||   |||||| ||||||||||||||||||||||||| ||| ||||    
T  8388909 atcaagtagctcgaaaacccgattttagactaagaacagccaacaatgacccaaaactgaaggatgagagttaggaagattaatattgtccataagatgg 8388810  T
Q  242 ctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    | || ||||||||||| || ||||| || |||||||    
T  8388809 caatccatgttacaaacatctttagaatttgtgctg 8388774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 120 - 253
Target Start/End: Original strand, 38308706 - 38308840
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagt--tagga 217  Q
    |||||||||| ||||||||| |||||||||||||||||  |||||||||||||||||||| |||| || ||||||||| | |||||| | |||  || ||    
T  38308706 ggggaagtttcagagcaatctgatcaagtagcccgaaatcccgatttttgactaagaacaggtaacaa-gacccaaaacagaaggatgatagttataaga 38308804  T
Q  218 agattaatattgtccctaaaatggctatacatgtta 253  Q
    ||||||||||||||| ||||||| | || |||||||    
T  38308805 agattaatattgtccataaaatgacaatccatgtta 38308840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 120 - 259
Target Start/End: Complemental strand, 42479023 - 42478884
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    |||||||||| ||||||||| ||||||||||||||||||    |||||||||| |||||   ||| ||||||| |||| | |||||| ||||||||||||    
T  42479023 ggggaagtttcagagcaatctgatcaagtagcccgaaaactgaatttttgactgagaacggctaacaatgacctaaaacataaggatgagagttaggaag 42478924  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaata 259  Q
    |||||||| |||| |||| ||| |||  || |||||||||    
T  42478923 attaatatggtccttaaactggttatctatattacaaata 42478884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 45293916 - 45293813
Alignment:
Q  124 aagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagatta 223  Q
    |||||| ||||||||  |||||||||||||||||| | ||||||||||||||||||| ||  ||||||| |||| | || ||| ||||||||||||||||    
T  45293916 aagtttcagagcaatatgatcaagtagcccgaaaaccggatttttgactaagaacaactagcaatgacctaaaacagaaagatgagagttaggaagatta 45293817  T
Q  224 atat 227  Q
    ||||    
T  45293816 atat 45293813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 154 - 265
Target Start/End: Original strand, 17474707 - 17474818
Alignment:
Q  154 gaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtccctaaaatggctatacatgtta 253  Q
    ||||| |||||||||||| ||||||| |||| |||| | || || | ||  || |||||||||||||||||||||||| |||||||| |||| |||||||    
T  17474707 gaaaacccgatttttgacgaagaacaggtaacaatgccgcataacagaattatgagagttaggaagattaatattgtctctaaaatgactatccatgtta 17474806  T
Q  254 caaatatgttta 265  Q
    |||| |||||||    
T  17474807 caaacatgttta 17474818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 131 - 257
Target Start/End: Original strand, 37773700 - 37773827
Alignment:
Q  131 agagcaatccgatcaagtagcccgaaaatcc--gatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatatt 228  Q
    ||||||||| ||||||||||||| ||||| |  || |||||||||||||||| ||| ||||| | |||| | |||||| |||||||| |||||||| ||     
T  37773700 agagcaatctgatcaagtagccc-aaaatactggacttttgactaagaacaactaacaatgaactaaaacagaaggatgagagttagaaagattaacata 37773798  T
Q  229 gtccctaaaatggctatacatgttacaaa 257  Q
    |||| |||| ||||||| |||||||||||    
T  37773799 gtccttaaactggctatccatgttacaaa 37773827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 227
Target Start/End: Complemental strand, 26228330 - 26228239
Alignment:
Q  136 aatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatat 227  Q
    |||| ||||||||||| ||||||   ||||||||||||||||||| ||| ||| ||| |||| |||||||| |||||||| |||||||||||    
T  26228330 aatctgatcaagtagctcgaaaactagatttttgactaagaacaactaacaattacctaaaacaaaaggatgagagttagcaagattaatat 26228239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 263
Target Start/End: Original strand, 17766784 - 17766846
Alignment:
Q  201 aaggataagagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtt 263  Q
    |||||| ||||||||||||||||||||||||| ||||||| ||||  |||||||||| |||||    
T  17766784 aaggatgagagttaggaagattaatattgtccttaaaatgactatcaatgttacaaacatgtt 17766846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 13704690 - 13704763
Alignment:
Q  124 aagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaa 197  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||||||| | ||||| ||| ||| ||| ||||    
T  13704690 aagtttcagagcaatctgatcaagtagcccgaaaatcggatttttgactgaaaacaactaacaataacctaaaa 13704763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 266
Target Start/End: Original strand, 9847386 - 9847440
Alignment:
Q  212 ttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtttag 266  Q
    ||||||||||||||||||||| ||||||| ||||  | |||||||||||||||||    
T  9847386 ttaggaagattaatattgtccttaaaatgactatcgacgttacaaatatgtttag 9847440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 263
Target Start/End: Original strand, 34519492 - 34519554
Alignment:
Q  201 aaggataagagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtt 263  Q
    |||||| | ||||||||||||||||||||||| |||||||  ||| ||||||||||| |||||    
T  34519492 aaggatgaaagttaggaagattaatattgtccttaaaatgattatccatgttacaaacatgtt 34519554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 173
Target Start/End: Complemental strand, 27670764 - 27670723
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgacta 173  Q
    ||||||||||||||||||| ||||||| ||||||||||||||    
T  27670764 gagcaatccgatcaagtagtccgaaaacccgatttttgacta 27670723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 38065463 - 38065528
Alignment:
Q  132 gagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaa 197  Q
    ||||||||||||||| ||||| |||||||  |||||| |||||||||| |||| ||| ||||||||    
T  38065463 gagcaatccgatcaaatagcctgaaaatctaattttttactaagaacaggtaacaataacccaaaa 38065528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 263
Target Start/End: Original strand, 9847167 - 9847229
Alignment:
Q  201 aaggataagagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgtt 263  Q
    |||||| | ||||| ||||||||||||||||| ||||||| ||||  |||||||||| |||||    
T  9847167 aaggatgaaagttatgaagattaatattgtccttaaaatgactatcaatgttacaaacatgtt 9847229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 82; Significance: 9e-39; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 120 - 277
Target Start/End: Original strand, 141843 - 141999
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaag 219  Q
    ||||||||||  ||||||||||||||||||| | ||||| |||||||||||||||||||| | || |||||||||||  | ||||||  |||||||||||    
T  141843 ggggaagtttcggagcaatccgatcaagtagtctgaaaacccgatttttgactaagaacatgcaacaatgacccaaac-agaaggatgggagttaggaag 141941  T
Q  220 attaatattgtccctaaaatggctatacatgttacaaatatgtttaggatctgtgctg 277  Q
    ||||||||||||||||||||| |||| ||||||||||| |||||||| || |||||||    
T  141942 attaatattgtccctaaaatgactatccatgttacaaacatgtttagaatttgtgctg 141999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 120 - 266
Target Start/End: Original strand, 3273 - 3420
Alignment:
Q  120 ggggaagttttagagcaatccgatcaagtagcccgaaaatccgatttttg-actaagaacaagtaagaatgacccaaaataaaaggataagagttaggaa 218  Q
    |||||||||| ||||||||| |||||||||||||||||| | |||||||  ||||||||||||||| |||||||||||| | |||||| ||||||| |||    
T  3273 ggggaagtttcagagcaatctgatcaagtagcccgaaaacctgatttttttactaagaacaagtaacaatgacccaaaacagaaggatgagagttacgaa 3372  T
Q  219 gattaatattgtccctaaaatggctatacatgttacaaatatgtttag 266  Q
    ||||||||||||||||||||||  |||  |||||||||| ||||||||    
T  3373 gattaatattgtccctaaaatgattatcgatgttacaaacatgtttag 3420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 124 - 262
Target Start/End: Original strand, 9380 - 9518
Alignment:
Q  124 aagttttagagcaatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagatta 223  Q
    |||||| |||||||||||||||||||  ||||||||||||||||| |||||||||| |||| |||||||||||| | || ||| | |||||  || ||||    
T  9380 aagtttcagagcaatccgatcaagtaatccgaaaatccgatttttaactaagaacatgtaacaatgacccaaaacagaatgatgaaagttataaatatta 9479  T
Q  224 atattgtccctaaaatggctatacatgttacaaatatgt 262  Q
    ||||||||| ||||||| |||| ||||||||||| ||||    
T  9480 atattgtccataaaatgactatccatgttacaaacatgt 9518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 264
Target Start/End: Complemental strand, 23301 - 23238
Alignment:
Q  201 aaggataagagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgttt 264  Q
    |||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||    
T  23301 aaggatgagagttaggaagattaatattgtccctaaaatgactatccatgttacaaacatgttt 23238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 263
Target Start/End: Original strand, 59865 - 59992
Alignment:
Q  136 aatccgatcaagtagcccgaaaatccgatttttgactaagaacaagtaagaatgacccaaaataaaaggataagagttaggaagattaatattgtcccta 235  Q
    |||| ||||||||| ||||||||||  ||||||||||||||||   ||| ||||||| ||||| |      | |||||||||||||||||||||||  ||    
T  59865 aatctgatcaagtaacccgaaaatcaaatttttgactaagaacggctaacaatgacctaaaatgactatccatgagttaggaagattaatattgtcttta 59964  T
Q  236 aaatggctatacatgttacaaatatgtt 263  Q
    ||||| ||||  |||||||||| |||||    
T  59965 aaatgactatctatgttacaaacatgtt 59992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 265
Target Start/End: Complemental strand, 59551 - 59495
Alignment:
Q  209 gagttaggaagattaatattgtccctaaaatggctatacatgttacaaatatgttta 265  Q
    ||||||| |||||||||||||||| ||||||| |||| ||||| ||||| |||||||    
T  59551 gagttagaaagattaatattgtccttaaaatgactatccatgtcacaaacatgttta 59495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University