View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12765_low_23 (Length: 245)
Name: NF12765_low_23
Description: NF12765
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12765_low_23 |
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Alignment Details
Target: chr6 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 13 - 231
Target Start/End: Original strand, 1724320 - 1724538
Alignment:
| Q |
13 |
gttcactttaacaaaagattcctttggctttttcaaaagaaaaaactattatagttgaaataataagaatttaagtatcattggtacataattcatttat |
112 |
Q |
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| T |
1724320 |
gttcactttaacaaaagattcctttggctttttcaaaagaaaaaactattatagttgaaataataagaatttaagtatcattggtacataattcatttat |
1724419 |
T |
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| Q |
113 |
aatttgtcaaaactaaaatggaaaaatgaactgaaaatgttgagaatatggtaccattagaaatttcagaatagacatataaggaaatggaataatgtgg |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1724420 |
aatttgtcaaaactaaaatggaaaaatgaactgaaaatgttgagaatatggtaccattagaaatttcagaatagacatataaggaaatggaataatgtgg |
1724519 |
T |
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| Q |
213 |
gaattacgcgtccatactg |
231 |
Q |
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||||||||||||||||||| |
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| T |
1724520 |
gaattacgcgtccatactg |
1724538 |
T |
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