View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12766_low_2 (Length: 454)
Name: NF12766_low_2
Description: NF12766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12766_low_2 |
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Alignment Details
Target: chr8 (Bit Score: 390; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 390; E-Value: 0
Query Start/End: Original strand, 18 - 447
Target Start/End: Complemental strand, 41218008 - 41217579
Alignment:
| Q |
18 |
aaatatagtagtgtttggttaattaaattaatcaaatttagcacaagtagacttctatcttccaattaaacatcagtcaaagaaattccgattaaggata |
117 |
Q |
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| T |
41218008 |
aaatatagtagtgtttggttaattaaattaatcaaatttagcacaagtagacttctatcttccaattaaacatcagtcaaagaaattccaattaaggata |
41217909 |
T |
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| Q |
118 |
aaaggaagttaatatatattttacgtttctcacactttagtgctgtcaaatctttggcttaaaatgatgactgagagcacacaacaaactcaaagtgtgg |
217 |
Q |
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| T |
41217908 |
aaaggaagttaatatatattttacgtttctcacactttagtgctgtcaaatctttggcttaaaatgatgactgagagcacacaacaaactcaaagtgtgg |
41217809 |
T |
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| Q |
218 |
agtagaggactaaaatccttcatgaattcacacaagtgcacatgcaatctctccttttagccaagcacatttctgatataaaaatatttctccttccaat |
317 |
Q |
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| T |
41217808 |
agtagaggactaaaatccttcatgaattcacacaagtacacatgcaatctctccttttagccaagcacatttctgatataaaaatatttctccttgcaat |
41217709 |
T |
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| Q |
318 |
agtgtgttgaattcgtgactcatcaatactacatggattatgaatgagataaatgttagatataataaagaagtaatttgtatatgacgttttacgattt |
417 |
Q |
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| T |
41217708 |
agtgtgttgaattcgtgactcatcaatactacatggattatgaatcagataaatgttggatacaataaagaaataatttgtatatgacgctttacgattt |
41217609 |
T |
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| Q |
418 |
ttagtgaagatttgatgttttggtcctttg |
447 |
Q |
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| T |
41217608 |
ttagtgaagatatgatgttttggtcttttg |
41217579 |
T |
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