View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12767_high_27 (Length: 292)
Name: NF12767_high_27
Description: NF12767
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12767_high_27 |
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Alignment Details
Target: chr5 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 1 - 274
Target Start/End: Complemental strand, 6626938 - 6626665
Alignment:
| Q |
1 |
cccaagttggggcgcactaggccaccgcgacgtagatgcctttcaaatacagagttcttaagagttgtaccattgaagtaaatgagagtgagttgctcaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6626938 |
cccaagttggggcgcactaggccaccgcgacgtagatgcctttcaaatacagagttcttaagagttgtaccattgaagtaaatgagagtgagttgctcaa |
6626839 |
T |
|
| Q |
101 |
aaaagatatgtaaaaatagtccttttgattaatgaggattttcttgcagcatgttctgacctctaaattccatgtacagtgtttttgcaagcaaagagac |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6626838 |
aaaagatatgtaaaaatagtccttttgattaatgaggattttcttgcagcatgttctgacctctaaattccatgtacagtgtttttgcaagcaaagagac |
6626739 |
T |
|
| Q |
201 |
aagaaggaatgcagagaatgcggagacaaggccacctgggagtaggagtgtgcgtcaagatacaagtggggatg |
274 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6626738 |
gagaaggaatgcagagaatgcggagacaaggccacctgggagtaggagtgtgcgtcaagatacaagtggggatg |
6626665 |
T |
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