View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12767_low_23 (Length: 372)

Name: NF12767_low_23
Description: NF12767
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12767_low_23
NF12767_low_23
[»] chr8 (39 HSPs)
chr8 (136-321)||(44342821-44342992)
chr8 (4-98)||(44342999-44343106)
chr8 (211-264)||(4989499-4989552)
chr8 (211-264)||(37559612-37559665)
chr8 (211-264)||(39463280-39463333)
chr8 (211-264)||(39698745-39698798)
chr8 (211-264)||(15160525-15160578)
chr8 (211-264)||(19438257-19438310)
chr8 (211-264)||(31693700-31693753)
chr8 (211-264)||(35356328-35356381)
chr8 (211-264)||(43084706-43084759)
chr8 (211-264)||(43448737-43448790)
chr8 (213-265)||(9304711-9304763)
chr8 (213-264)||(29025825-29025876)
chr8 (211-264)||(6374435-6374487)
chr8 (215-264)||(13496260-13496309)
chr8 (211-264)||(31899327-31899380)
chr8 (211-264)||(40228595-40228648)
chr8 (213-264)||(5295485-5295536)
chr8 (225-264)||(19574422-19574461)
chr8 (215-264)||(4760637-4760686)
chr8 (215-264)||(7839483-7839532)
chr8 (211-264)||(9812194-9812247)
chr8 (211-264)||(17655928-17655981)
chr8 (211-264)||(17920977-17921030)
chr8 (211-264)||(40362456-40362509)
chr8 (215-264)||(44713559-44713608)
chr8 (212-264)||(9880580-9880632)
chr8 (214-264)||(34156558-34156609)
chr8 (213-264)||(34796757-34796808)
chr8 (213-248)||(43974886-43974921)
chr8 (211-253)||(396303-396345)
chr8 (210-264)||(13368027-13368081)
chr8 (219-264)||(514903-514948)
chr8 (211-264)||(29312272-29312325)
chr8 (219-264)||(36921386-36921431)
chr8 (211-248)||(41679340-41679377)
chr8 (213-253)||(40400066-40400106)
chr8 (213-253)||(40400465-40400505)
[»] scaffold0294 (1 HSPs)
scaffold0294 (211-264)||(3583-3636)
[»] chr6 (22 HSPs)
chr6 (211-264)||(19675001-19675054)
chr6 (213-264)||(234057-234108)
chr6 (214-264)||(29713485-29713535)
chr6 (211-265)||(34513681-34513735)
chr6 (215-264)||(4850574-4850623)
chr6 (211-264)||(3988822-3988875)
chr6 (219-264)||(10520718-10520763)
chr6 (211-264)||(24163793-24163846)
chr6 (211-264)||(29399967-29400020)
chr6 (215-264)||(32429309-32429358)
chr6 (224-264)||(1134959-1134999)
chr6 (213-264)||(32193725-32193776)
chr6 (211-261)||(12063592-12063642)
chr6 (214-264)||(12459397-12459447)
chr6 (211-264)||(31443524-31443578)
chr6 (211-264)||(9940669-9940722)
chr6 (211-264)||(18737169-18737222)
chr6 (211-264)||(23259404-23259457)
chr6 (211-264)||(13503925-13503980)
chr6 (217-264)||(19689357-19689404)
chr6 (211-264)||(577082-577135)
chr6 (211-264)||(24556007-24556060)
[»] chr4 (56 HSPs)
chr4 (211-264)||(37654430-37654483)
chr4 (211-264)||(19451294-19451347)
chr4 (211-264)||(45839658-45839711)
chr4 (211-264)||(52957873-52957926)
chr4 (213-264)||(10573237-10573288)
chr4 (211-261)||(19878669-19878719)
chr4 (211-264)||(1819583-1819636)
chr4 (215-264)||(24940904-24940953)
chr4 (211-260)||(39982124-39982173)
chr4 (211-264)||(40345430-40345483)
chr4 (211-264)||(41496226-41496279)
chr4 (211-264)||(44571948-44572001)
chr4 (211-264)||(47817759-47817812)
chr4 (211-264)||(52915625-52915678)
chr4 (213-264)||(38510328-38510379)
chr4 (217-264)||(50203101-50203148)
chr4 (211-253)||(4505358-4505400)
chr4 (215-264)||(2493127-2493176)
chr4 (215-264)||(19930739-19930788)
chr4 (211-264)||(21864466-21864519)
chr4 (211-264)||(21920327-21920380)
chr4 (211-264)||(25123809-25123862)
chr4 (211-264)||(30261280-30261333)
chr4 (211-264)||(34316243-34316296)
chr4 (215-264)||(34413630-34413679)
chr4 (211-264)||(37624577-37624630)
chr4 (211-264)||(41920392-41920445)
chr4 (215-256)||(44061033-44061074)
chr4 (211-264)||(45043671-45043724)
chr4 (215-264)||(52848137-52848186)
chr4 (211-264)||(56373660-56373713)
chr4 (224-264)||(18430023-18430063)
chr4 (225-264)||(11364261-11364300)
chr4 (213-264)||(29519608-29519659)
chr4 (229-264)||(44868334-44868369)
chr4 (213-264)||(50623106-50623157)
chr4 (211-264)||(29370624-29370678)
chr4 (214-264)||(54042266-54042316)
chr4 (211-264)||(2728481-2728534)
chr4 (211-264)||(7906079-7906132)
chr4 (211-264)||(20448060-20448113)
chr4 (219-264)||(22220442-22220487)
chr4 (224-264)||(49080560-49080600)
chr4 (215-253)||(25231200-25231238)
chr4 (214-264)||(38991844-38991894)
chr4 (211-264)||(40010956-40011010)
chr4 (234-264)||(47458468-47458498)
chr4 (211-264)||(52253866-52253922)
chr4 (211-264)||(6991345-6991397)
chr4 (211-264)||(8971063-8971116)
chr4 (224-261)||(30780218-30780255)
chr4 (211-264)||(31917977-31918030)
chr4 (227-264)||(50621241-50621278)
chr4 (219-264)||(53814580-53814625)
chr4 (213-264)||(620260-620312)
chr4 (224-264)||(46392144-46392184)
[»] chr1 (55 HSPs)
chr1 (211-264)||(44108620-44108673)
chr1 (211-264)||(15823055-15823108)
chr1 (211-264)||(29567917-29567970)
chr1 (211-264)||(50094250-50094303)
chr1 (214-264)||(27209013-27209063)
chr1 (211-265)||(44557120-44557174)
chr1 (211-264)||(1740718-1740771)
chr1 (211-264)||(2610907-2610960)
chr1 (211-264)||(9915464-9915517)
chr1 (211-264)||(16757271-16757324)
chr1 (211-264)||(26595146-26595199)
chr1 (211-264)||(32807015-32807068)
chr1 (211-264)||(35848010-35848063)
chr1 (211-264)||(49468788-49468841)
chr1 (211-264)||(50249331-50249384)
chr1 (213-264)||(12591159-12591210)
chr1 (213-264)||(34047312-34047363)
chr1 (211-262)||(34110548-34110599)
chr1 (214-264)||(48025331-48025381)
chr1 (211-252)||(24483409-24483450)
chr1 (211-264)||(25487109-25487162)
chr1 (211-264)||(25560949-25561002)
chr1 (211-264)||(26755241-26755293)
chr1 (211-264)||(27720979-27721032)
chr1 (211-264)||(31798610-31798663)
chr1 (211-264)||(34032157-34032210)
chr1 (211-264)||(46554819-46554872)
chr1 (211-252)||(49402960-49403001)
chr1 (215-264)||(49900834-49900883)
chr1 (214-262)||(25151839-25151887)
chr1 (224-264)||(48009044-48009084)
chr1 (225-264)||(24611597-24611636)
chr1 (213-264)||(26352158-26352209)
chr1 (218-264)||(12484705-12484751)
chr1 (211-253)||(13408353-13408395)
chr1 (211-253)||(14593408-14593450)
chr1 (211-253)||(44258595-44258637)
chr1 (211-252)||(5463596-5463637)
chr1 (211-264)||(10842801-10842854)
chr1 (211-264)||(18794619-18794672)
chr1 (215-264)||(24884440-24884489)
chr1 (211-264)||(40717373-40717426)
chr1 (211-264)||(43759353-43759406)
chr1 (219-264)||(46286895-46286940)
chr1 (219-252)||(51244926-51244959)
chr1 (211-264)||(52024311-52024364)
chr1 (211-264)||(52125213-52125266)
chr1 (226-258)||(4985-5017)
chr1 (225-264)||(7191284-7191323)
chr1 (225-264)||(31699366-31699405)
chr1 (226-264)||(31491847-31491885)
chr1 (211-261)||(38531377-38531427)
chr1 (211-264)||(14373490-14373543)
chr1 (211-264)||(49426492-49426545)
chr1 (211-264)||(15573628-15573685)
[»] scaffold0565 (1 HSPs)
scaffold0565 (211-264)||(9720-9773)
[»] scaffold0110 (1 HSPs)
scaffold0110 (211-264)||(24819-24872)
[»] chr7 (46 HSPs)
chr7 (211-264)||(31418590-31418643)
chr7 (211-264)||(45948707-45948760)
chr7 (211-263)||(21752189-21752241)
chr7 (211-265)||(24680149-24680203)
chr7 (214-264)||(48684747-48684797)
chr7 (211-264)||(1742012-1742065)
chr7 (215-264)||(10476161-10476210)
chr7 (215-264)||(12977763-12977812)
chr7 (211-264)||(13405204-13405257)
chr7 (211-264)||(24133207-24133260)
chr7 (211-264)||(25440893-25440946)
chr7 (211-264)||(27947578-27947631)
chr7 (214-264)||(30312482-30312532)
chr7 (214-264)||(33939811-33939861)
chr7 (211-264)||(715940-715993)
chr7 (211-264)||(19105078-19105131)
chr7 (211-264)||(22298017-22298070)
chr7 (211-264)||(23935443-23935495)
chr7 (211-264)||(29531012-29531065)
chr7 (219-264)||(36807964-36808009)
chr7 (211-264)||(37490805-37490858)
chr7 (211-264)||(37502340-37502393)
chr7 (215-264)||(37815749-37815798)
chr7 (211-264)||(40753505-40753558)
chr7 (211-264)||(42285929-42285982)
chr7 (211-264)||(42880011-42880064)
chr7 (211-264)||(44453156-44453209)
chr7 (213-261)||(41137751-41137799)
chr7 (225-264)||(6563491-6563530)
chr7 (211-265)||(10599234-10599288)
chr7 (215-264)||(8604000-8604049)
chr7 (215-264)||(18292360-18292409)
chr7 (211-264)||(31929937-31929990)
chr7 (211-264)||(34274815-34274868)
chr7 (214-262)||(35777843-35777891)
chr7 (213-264)||(28289238-28289288)
chr7 (213-264)||(34012184-34012235)
chr7 (211-264)||(18270598-18270652)
chr7 (211-264)||(1031176-1031229)
chr7 (211-264)||(6747248-6747300)
chr7 (211-264)||(21819305-21819357)
chr7 (211-264)||(27935788-27935841)
chr7 (215-264)||(42753733-42753781)
chr7 (219-264)||(44567118-44567163)
chr7 (224-264)||(16564844-16564884)
chr7 (224-264)||(16600778-16600818)
[»] chr5 (41 HSPs)
chr5 (211-264)||(14620573-14620626)
chr5 (211-264)||(39566204-39566257)
chr5 (211-264)||(3306088-3306141)
chr5 (211-264)||(6518997-6519050)
chr5 (211-264)||(7317049-7317102)
chr5 (211-264)||(7579948-7580001)
chr5 (211-264)||(10345011-10345064)
chr5 (211-264)||(21319389-21319442)
chr5 (211-264)||(27600420-27600473)
chr5 (211-264)||(27797802-27797855)
chr5 (211-264)||(34446106-34446159)
chr5 (211-264)||(35765979-35766032)
chr5 (211-264)||(42104142-42104195)
chr5 (215-263)||(2729866-2729914)
chr5 (213-264)||(3025010-3025061)
chr5 (213-264)||(21195402-21195453)
chr5 (211-264)||(4630886-4630939)
chr5 (211-264)||(11977609-11977662)
chr5 (219-264)||(26660784-26660829)
chr5 (219-264)||(26932377-26932422)
chr5 (219-264)||(36073709-36073754)
chr5 (211-264)||(36164908-36164961)
chr5 (216-264)||(32158586-32158634)
chr5 (229-264)||(29807394-29807429)
chr5 (226-264)||(39335283-39335321)
chr5 (219-264)||(13761586-13761631)
chr5 (211-264)||(14005913-14005966)
chr5 (215-264)||(38369897-38369946)
chr5 (211-248)||(39729980-39730017)
chr5 (228-264)||(843056-843092)
chr5 (219-262)||(13974302-13974345)
chr5 (214-264)||(14161979-14162030)
chr5 (213-252)||(24281016-24281055)
chr5 (213-252)||(24381157-24381196)
chr5 (211-264)||(34208973-34209029)
chr5 (211-264)||(39504743-39504797)
chr5 (211-264)||(9066502-9066555)
chr5 (211-264)||(25362879-25362932)
chr5 (216-264)||(34534384-34534433)
chr5 (215-260)||(34972725-34972770)
chr5 (225-264)||(891092-891132)
[»] chr3 (48 HSPs)
chr3 (211-264)||(50646186-50646239)
chr3 (213-264)||(41850413-41850464)
chr3 (211-264)||(2458028-2458081)
chr3 (211-264)||(3152882-3152935)
chr3 (211-264)||(4392217-4392270)
chr3 (215-264)||(4759016-4759065)
chr3 (215-264)||(11393570-11393619)
chr3 (211-264)||(30426400-30426453)
chr3 (211-264)||(33024376-33024429)
chr3 (215-264)||(36729886-36729935)
chr3 (211-264)||(38016396-38016448)
chr3 (215-264)||(40487853-40487902)
chr3 (211-264)||(45213798-45213851)
chr3 (219-264)||(45566828-45566873)
chr3 (211-264)||(48901741-48901794)
chr3 (211-264)||(48903307-48903360)
chr3 (216-264)||(27067634-27067682)
chr3 (212-264)||(42571605-42571657)
chr3 (211-262)||(35557836-35557887)
chr3 (213-264)||(42072008-42072059)
chr3 (213-264)||(50088392-50088443)
chr3 (210-264)||(30934885-30934939)
chr3 (219-264)||(32492257-32492302)
chr3 (211-264)||(36460827-36460880)
chr3 (211-264)||(36844818-36844871)
chr3 (211-264)||(39356906-39356959)
chr3 (211-264)||(44676242-44676295)
chr3 (215-264)||(47895420-47895469)
chr3 (211-264)||(50038247-50038300)
chr3 (224-264)||(7230972-7231012)
chr3 (225-264)||(51398045-51398084)
chr3 (213-264)||(53200757-53200807)
chr3 (211-264)||(30431141-30431194)
chr3 (211-264)||(33194107-33194160)
chr3 (219-264)||(45460692-45460737)
chr3 (213-253)||(19115410-19115450)
chr3 (225-264)||(19373621-19373660)
chr3 (225-264)||(22857125-22857164)
chr3 (213-264)||(31853638-31853689)
chr3 (213-264)||(47137986-47138037)
chr3 (211-246)||(52654325-52654360)
chr3 (214-264)||(30315333-30315383)
chr3 (211-264)||(9189511-9189564)
chr3 (219-264)||(11019902-11019947)
chr3 (215-264)||(23525392-23525441)
chr3 (211-264)||(31583510-31583563)
chr3 (227-264)||(41287572-41287609)
chr3 (215-248)||(42886776-42886809)
[»] scaffold0182 (1 HSPs)
scaffold0182 (211-263)||(18334-18386)
[»] chr2 (50 HSPs)
chr2 (213-264)||(27964449-27964500)
chr2 (214-264)||(12342117-12342167)
chr2 (211-265)||(13562015-13562069)
chr2 (211-264)||(4469522-4469575)
chr2 (211-264)||(12566059-12566112)
chr2 (211-264)||(14285959-14286012)
chr2 (211-264)||(16463111-16463164)
chr2 (211-264)||(18719511-18719564)
chr2 (211-264)||(22620413-22620466)
chr2 (211-264)||(25383564-25383616)
chr2 (211-264)||(43427366-43427419)
chr2 (211-264)||(45081979-45082032)
chr2 (211-264)||(45301786-45301839)
chr2 (213-264)||(6220483-6220534)
chr2 (213-264)||(16807596-16807647)
chr2 (213-264)||(16846877-16846928)
chr2 (211-262)||(43971525-43971576)
chr2 (214-264)||(441310-441360)
chr2 (214-264)||(7874723-7874773)
chr2 (214-264)||(29396759-29396809)
chr2 (214-264)||(36178000-36178050)
chr2 (219-264)||(7644675-7644720)
chr2 (211-264)||(8540059-8540112)
chr2 (211-264)||(30855126-30855178)
chr2 (215-264)||(36685819-36685868)
chr2 (214-258)||(4133048-4133092)
chr2 (212-264)||(4288790-4288842)
chr2 (215-266)||(34546408-34546459)
chr2 (213-251)||(16792506-16792544)
chr2 (215-264)||(7028891-7028940)
chr2 (211-264)||(12394000-12394053)
chr2 (211-264)||(15083231-15083284)
chr2 (211-264)||(17695904-17695957)
chr2 (211-264)||(18579188-18579241)
chr2 (211-264)||(35799224-35799276)
chr2 (211-264)||(38926627-38926680)
chr2 (215-264)||(42004916-42004965)
chr2 (224-264)||(32228090-32228130)
chr2 (225-264)||(4658312-4658351)
chr2 (211-246)||(45423639-45423674)
chr2 (211-264)||(4051782-4051836)
chr2 (211-253)||(5717534-5717576)
chr2 (211-264)||(1423212-1423265)
chr2 (211-264)||(11188571-11188624)
chr2 (211-264)||(29808833-29808886)
chr2 (211-264)||(34455011-34455064)
chr2 (213-264)||(8774079-8774128)
chr2 (213-264)||(8789507-8789556)
chr2 (224-264)||(19164391-19164431)
chr2 (228-264)||(37038848-37038884)
[»] scaffold2107 (1 HSPs)
scaffold2107 (211-264)||(592-645)
[»] scaffold0502 (1 HSPs)
scaffold0502 (215-264)||(650-699)
[»] scaffold0332 (1 HSPs)
scaffold0332 (211-264)||(3889-3942)
[»] scaffold0015 (1 HSPs)
scaffold0015 (211-264)||(21160-21213)
[»] scaffold0078 (1 HSPs)
scaffold0078 (211-264)||(1492-1545)
[»] scaffold0048 (1 HSPs)
scaffold0048 (211-264)||(62654-62707)
[»] scaffold0026 (1 HSPs)
scaffold0026 (219-264)||(4170-4215)
[»] scaffold0983 (1 HSPs)
scaffold0983 (211-264)||(765-818)
[»] scaffold0300 (1 HSPs)
scaffold0300 (224-260)||(4599-4635)


Alignment Details
Target: chr8 (Bit Score: 77; Significance: 1e-35; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 136 - 321
Target Start/End: Complemental strand, 44342992 - 44342821
Alignment:
Q  136 agataattgagatttatttatttatagaagnnnnnnntaagtcgttgatatatattccctccgtattaaaataaatcagtttccaatacaataataactt 235  Q
    ||||||||||||||||||||||||||||||        ||||||||| |||||| | | ||||||||||||||| ||||||||||||| |||||||||||    
T  44342992 agataattgagatttatttatttatagaagaaaaaaa-aagtcgttggtatatacttcatccgtattaaaataagtcagtttccaatataataataactt 44342894  T
Q  236 tttcttttcaattgtaccattcaattaatgaaaataaactaatgattgattaggataattaatgtatttcgacattcatttttaat 321  Q
    |||||||||||||||||| || |||||||||||||||             ||||||||| ||||||||||||||||||||||||||    
T  44342893 tttcttttcaattgtaccctttaattaatgaaaataa-------------taggataatgaatgtatttcgacattcatttttaat 44342821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 44343106 - 44342999
Alignment:
Q  4 ataaacttgctcaagctttttgcaccaacatgcccatat-------------gggtaaccagttgttacttcttcgtcacctccagctcttattttgtaa 90  Q
    |||||||||||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||||||||||||||||||||||    
T  44343106 ataaacttgctcaagctttttgcaccaacatgcccatatcagcagctggtgtgggtaaccagttgttacttcttcgtcacctccagctcttattttgtaa 44343007  T
Q  91 ataagttt 98  Q
    ||||||||    
T  44343006 ataagttt 44342999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 4989499 - 4989552
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  4989499 tcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaat 4989552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 37559665 - 37559612
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  37559665 tcagtttccaatacaataataactttttcttttcaattgtaccctccaattaat 37559612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 39463280 - 39463333
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  39463280 tcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaat 39463333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 39698798 - 39698745
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  39698798 tcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaat 39698745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 15160578 - 15160525
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||||||||||||||||||||||| | ||||||||    
T  15160578 tcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaat 15160525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 19438257 - 19438310
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||||||  ||||||||||||||||||||||||||||| ||||||||||    
T  19438257 tcagtttccaatgtaataataactttttcttttcaattgtacccttcaattaat 19438310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 31693753 - 31693700
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||| |||||||||||||||||||||||||||||| ||||||||||    
T  31693753 tcagttttcaatgcaataataactttttcttttcaattgtacctttcaattaat 31693700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 35356328 - 35356381
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| ||||||||||||||||||||||||| |||| ||||||||||    
T  35356328 tcagtttccaatgcaataataactttttcttttcaattatacccttcaattaat 35356381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 43084759 - 43084706
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||| |||||||||||||||||||||||||||||| ||||||||||    
T  43084759 tcagttttcaatgcaataataactttttcttttcaattgtacctttcaattaat 43084706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 43448737 - 43448790
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| ||||||||||||||| |||||||||||||| ||||||||||    
T  43448737 tcagtttccaatgcaataataacttttttttttcaattgtacccttcaattaat 43448790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 213 - 265
Target Start/End: Complemental strand, 9304763 - 9304711
Alignment:
Q  213 agtttccaatacaataataactttttcttttcaattgtaccattcaattaatg 265  Q
    |||||||||| ||||||||| |||||||||||||||||||| |||||||||||    
T  9304763 agtttccaatgcaataataattttttcttttcaattgtacccttcaattaatg 9304711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 29025876 - 29025825
Alignment:
Q  213 agtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||| ||||||||||||||||||||||||| |||| ||||||||||    
T  29025876 agtttccaatgcaataataactttttcttttcaattctacccttcaattaat 29025825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 6374435 - 6374487
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||| |||||||||||||||||||||||||||||| ||||||||||    
T  6374435 tcagttttcaatgcaataataactttttcttttcaattgtacc-ttcaattaat 6374487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 13496260 - 13496309
Alignment:
Q  215 tttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||| |||||||||| |||||||||||||||||| |||||||||||    
T  13496260 tttccaatgcaataataacgttttcttttcaattgtacaattcaattaat 13496309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 31899380 - 31899327
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| ||||||||| |||||||||||||||||||  ||||||||||    
T  31899380 tcagtttccaatgcaataataattttttcttttcaattgtactcttcaattaat 31899327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 40228595 - 40228648
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||| |||||||||||||||||||||||||||||  ||||||||||    
T  40228595 tcagttttcaatgcaataataactttttcttttcaattgtacatttcaattaat 40228648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 5295536 - 5295485
Alignment:
Q  213 agtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||| ||| ||||||||| |||||||||||||||||||| ||||||||||    
T  5295536 agtttctaatgcaataataattttttcttttcaattgtacccttcaattaat 5295485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 264
Target Start/End: Original strand, 19574422 - 19574461
Alignment:
Q  225 aataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  19574422 aataataactttttcttttcaattgtacccttcaattaat 19574461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 4760686 - 4760637
Alignment:
Q  215 tttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||| ||| ||||| |||||||||||||||||||| ||||||||||    
T  4760686 tttccaatgcaacaataattttttcttttcaattgtacccttcaattaat 4760637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 7839483 - 7839532
Alignment:
Q  215 tttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||| |||||||||| |||||||||||||| |||| ||||||||||    
T  7839483 tttccaatgcaataataaccttttcttttcaattttacctttcaattaat 7839532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 9812194 - 9812247
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||| ||| ||||||||||||||| |||||||||||||| ||||| ||||    
T  9812194 tcagtttctaatgcaataataactttttattttcaattgtacctttcaagtaat 9812247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 17655928 - 17655981
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||| ||||||||||||||||||||||| |||||| | ||||||||    
T  17655928 tcagttttcaatgcaataataactttttcttttcaactgtaccctccaattaat 17655981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 17920977 - 17921030
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||| ||||||||||||||||||| |||||||||  ||||||||||    
T  17920977 tcagttttcaatgcaataataactttttctttacaattgtactcttcaattaat 17921030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 40362456 - 40362509
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||| ||||||||||||||||||||||||| |||| | ||||||||    
T  40362456 tcagttttcaatgcaataataactttttcttttcaattttaccctccaattaat 40362509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 44713559 - 44713608
Alignment:
Q  215 tttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||| ||||||||||||||| ||||||||| |||| ||||||||||    
T  44713559 tttccaatgcaataataacttttttttttcaattatacccttcaattaat 44713608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 9880632 - 9880580
Alignment:
Q  212 cagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||||| ||||||||| ||||||||||||||| | || ||||||||||    
T  9880632 cagtttccaatgcaataataattttttcttttcaattatgcccttcaattaat 9880580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 214 - 264
Target Start/End: Original strand, 34156558 - 34156609
Alignment:
Q  214 gtttccaatacaataataactttt-tcttttcaattgtaccattcaattaat 264  Q
    ||||||||| ||||||||| |||| |||||||||||||||| ||||||||||    
T  34156558 gtttccaatgcaataataatttttttcttttcaattgtacccttcaattaat 34156609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 34796808 - 34796757
Alignment:
Q  213 agtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||| ||| ||||||||| |||||||||||||||| ||| ||||||||||    
T  34796808 agtttctaatgcaataataattttttcttttcaattgaacccttcaattaat 34796757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 248
Target Start/End: Complemental strand, 43974921 - 43974886
Alignment:
Q  213 agtttccaatacaataataactttttcttttcaatt 248  Q
    |||||||||| |||||||||||||||||||||||||    
T  43974921 agtttccaatgcaataataactttttcttttcaatt 43974886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 396345 - 396303
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtacc 253  Q
    |||||||  ||| ||||||||||||||||||||||||||||||    
T  396345 tcagtttgaaatgcaataataactttttcttttcaattgtacc 396303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 264
Target Start/End: Complemental strand, 13368081 - 13368027
Alignment:
Q  210 atcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||| |||||||  |||||||||| ||||||||||||||| ||| ||||||||||    
T  13368081 atcaatttccaacgcaataataacattttcttttcaattgcacccttcaattaat 13368027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 514903 - 514948
Alignment:
Q  219 caatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||| ||||||||| |||||||||||||||||| | ||||||||||    
T  514903 caatgcaataataattttttcttttcaattgtatccttcaattaat 514948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 29312325 - 29312272
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| ||||||||||  ||| |||||||||||||  ||||||||||    
T  29312325 tcagtttccaatgcaataataaccgtttgttttcaattgtactcttcaattaat 29312272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 36921386 - 36921431
Alignment:
Q  219 caatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||| ||||||||| |||||||||||||||||||| | ||||||||    
T  36921386 caatgcaataataattttttcttttcaattgtaccttccaattaat 36921431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 41679340 - 41679377
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaatt 248  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  41679340 tcagttttcaatacaataataactttttctttttaatt 41679377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 40400106 - 40400066
Alignment:
Q  213 agtttccaatacaataataactttttcttttcaattgtacc 253  Q
    |||||||||| ||| ||||| ||||||||||||||||||||    
T  40400106 agtttccaatgcaacaataattttttcttttcaattgtacc 40400066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 40400465 - 40400505
Alignment:
Q  213 agtttccaatacaataataactttttcttttcaattgtacc 253  Q
    |||||| |||| |||||||| ||||||||||||||||||||    
T  40400465 agtttctaatataataataattttttcttttcaattgtacc 40400505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 3636 - 3583
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3636 tcagtttccaatacaataataactttttcttttcaattgtacccttcaattaat 3583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 2e-19; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 19675001 - 19675054
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  19675001 tcagtttccaatgcaataataactttttcttttcaattgtaccattcaattaat 19675054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 234057 - 234108
Alignment:
Q  213 agtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  234057 agtttccaatgcaataataactttttcttttcaattgtacccttcaattaat 234108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 264
Target Start/End: Complemental strand, 29713535 - 29713485
Alignment:
Q  214 gtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  29713535 gtttccaatgcaataataactttttcttttcaattgtacccttcaattaat 29713485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 265
Target Start/End: Complemental strand, 34513735 - 34513681
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaatg 265  Q
    |||||||||||| |||||||||||||||||||||||||||| | |||||||||||    
T  34513735 tcagtttccaatgcaataataactttttcttttcaattgtatccttcaattaatg 34513681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 4850623 - 4850574
Alignment:
Q  215 tttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  4850623 tttccaatgcaataataactttttcttttcaattgtaccatccaattaat 4850574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 3988875 - 3988822
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| ||||||||| ||||||||||||||| |||| ||||||||||    
T  3988875 tcagtttccaatgcaataataattttttcttttcaattatacccttcaattaat 3988822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 10520763 - 10520718
Alignment:
Q  219 caatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||    
T  10520763 caatacaataataattttttcttttcaattgtacccttcaattaat 10520718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 24163846 - 24163793
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| ||||||||| |||||||||||||||||||  ||||||||||    
T  24163846 tcagtttccaatgcaataataattttttcttttcaattgtacatttcaattaat 24163793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 29399967 - 29400020
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| ||||||||| |||||||||||||||||||| | ||||||||    
T  29399967 tcagtttccaatgcaataataattttttcttttcaattgtaccctccaattaat 29400020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 32429309 - 32429358
Alignment:
Q  215 tttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||| |||||||||||||||||||||||||||| ||| ||||||||    
T  32429309 tttccaatgcaataataactttttcttttcaattgtatcatccaattaat 32429358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 1134959 - 1134999
Alignment:
Q  224 caataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  1134959 caataataactttttcttttcaattgtacccttcaattaat 1134999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 32193725 - 32193776
Alignment:
Q  213 agtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||| ||| ||||||||| |||||||||||||||||||| ||||||||||    
T  32193725 agtttctaatgcaataataattttttcttttcaattgtacccttcaattaat 32193776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 261
Target Start/End: Complemental strand, 12063642 - 12063592
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaatt 261  Q
    |||||||||||| ||||||||| ||||| |||||||||||||| |||||||    
T  12063642 tcagtttccaatgcaataataatttttttttttcaattgtacccttcaatt 12063592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 264
Target Start/End: Complemental strand, 12459447 - 12459397
Alignment:
Q  214 gtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||| |||||||||||| |||||||||||||||| |||| ||||||||||    
T  12459447 gtttctaatacaataatatctttttcttttcaattatacccttcaattaat 12459397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 31443578 - 31443524
Alignment:
Q  211 tcagtttccaatacaataataact-ttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| ||||||||||| |||| |||||||||||||| ||||||||||    
T  31443578 tcagtttccaatgcaataataactttttttttttcaattgtacctttcaattaat 31443524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 9940669 - 9940722
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||| ||||||||||||||  |||||||||||||| ||||||||||    
T  9940669 tcagttttcaatgcaataataacttttctttttcaattgtacccttcaattaat 9940722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 18737222 - 18737169
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| ||||||||||| ||||||||||||| |||| || |||||||    
T  18737222 tcagtttccaatgcaataataactctttcttttcaattataccctttaattaat 18737169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 23259457 - 23259404
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| ||| |||||||||| ||||||||||||||| || |||||||    
T  23259457 tcagtttccaatgcaaaaataacttttacttttcaattgtacccttaaattaat 23259404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 13503980 - 13503925
Alignment:
Q  211 tcagtttccaatacaataataactttttct--tttcaattgtaccattcaattaat 264  Q
    |||||||||||| ||||||||||||||| |  ||||||||||||| ||||||||||    
T  13503980 tcagtttccaatgcaataataacttttttttatttcaattgtacccttcaattaat 13503925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 217 - 264
Target Start/End: Original strand, 19689357 - 19689404
Alignment:
Q  217 tccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||| ||||||||||||||||||||||| |||||  ||||||||||    
T  19689357 tccaatgcaataataactttttcttttcaactgtactcttcaattaat 19689404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 577082 - 577135
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||| ||||||||||||| || |||||||| |||| ||||||||||    
T  577082 tcagttttcaatgcaataataactttatcatttcaattatacccttcaattaat 577135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 24556060 - 24556007
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| ||||  |||||||| |||||||||||||||||||  ||||||||||    
T  24556060 tcagttttcaatgtaataataattttttcttttcaattgtactcttcaattaat 24556007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 2e-19; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 37654430 - 37654483
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  37654430 tcagtttccaatacaataataactttttcttttcaattgtacccttcaattaat 37654483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 19451347 - 19451294
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  19451347 tcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaat 19451294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 45839658 - 45839711
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  45839658 tcagtttctaatacaataataactttttattttcaattgtaccattcaattaat 45839711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 52957926 - 52957873
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  52957926 tcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaat 52957873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 10573288 - 10573237
Alignment:
Q  213 agtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  10573288 agtttccaatgcaataataactttttcttttcaattgtacccttcaattaat 10573237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 261
Target Start/End: Original strand, 19878669 - 19878719
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaatt 261  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  19878669 tcagtttccaatgcaataataactttttcttttcaattgtacccttcaatt 19878719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 1819583 - 1819636
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| ||||||||| |||||||||||||||||||| ||||||||||    
T  1819583 tcagtttccaatgcaataataaatttttcttttcaattgtacccttcaattaat 1819636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 24940904 - 24940953
Alignment:
Q  215 tttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  24940904 tttccaatgcaataataactttttcttttcaattgtacccttcaattaat 24940953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 260
Target Start/End: Original strand, 39982124 - 39982173
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaat 260  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  39982124 tcagtttccaatgcaataataactttttcttttcaattgtacccttcaat 39982173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 40345483 - 40345430
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| ||||||||| |||||||||||||||||||| ||||||||||    
T  40345483 tcagtttccaatgcaataataattttttcttttcaattgtacccttcaattaat 40345430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 41496226 - 41496279
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| ||||||||||||||||||||||||||||||||||  ||||||||||    
T  41496226 tcagttttcaatacaataataactttttcttttcaattgtactcttcaattaat 41496279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 44572001 - 44571948
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||| ||||||||||||||||||||||| ||||||||||    
T  44572001 tcagtttccaatgcaataaaaactttttcttttcaattgtacccttcaattaat 44571948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 47817759 - 47817812
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||| |||||||||||||||||||||||||||||| ||||||||||    
T  47817759 tcagtttgcaatgcaataataactttttcttttcaattgtacccttcaattaat 47817812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 52915678 - 52915625
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||||||||||||||||||||| ||| ||||||||    
T  52915678 tcagtttccaatgcaataataactttttcttttcaattgtatcatccaattaat 52915625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 38510379 - 38510328
Alignment:
Q  213 agtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||| |||| |||||||||||||||||||||||||||||||| ||||||||    
T  38510379 agttttcaatgcaataataactttttcttttcaattgtaccatccaattaat 38510328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 264
Target Start/End: Original strand, 50203101 - 50203148
Alignment:
Q  217 tccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  50203101 tccaatgcaataataactttttcttttcaattgtacccttcaattaat 50203148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 4505358 - 4505400
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtacc 253  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  4505358 tcagtttccaatgcaataataactttttcttttcaattgtacc 4505400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 2493127 - 2493176
Alignment:
Q  215 tttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||| ||||||||| |||||||||||||||||||| ||||||||||    
T  2493127 tttccaatgcaataataattttttcttttcaattgtacccttcaattaat 2493176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 19930739 - 19930788
Alignment:
Q  215 tttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||| || |||||||||||||||||||||||||||||| ||||||||||    
T  19930739 tttccgatgcaataataactttttcttttcaattgtacccttcaattaat 19930788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 21864519 - 21864466
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||||||||||||||||||||| | | ||||||||    
T  21864519 tcagtttccaatgcaataataactttttcttttcaattgtatcctccaattaat 21864466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 21920380 - 21920327
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||||||||||||||||||||| | | ||||||||    
T  21920380 tcagtttccaatgcaataataactttttcttttcaattgtatcctccaattaat 21920327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 25123862 - 25123809
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||||||||||||| |||||||||||| ||||||| ||||||||||    
T  25123862 tcagttttcaatacaataataattttttcttttcagttgtacccttcaattaat 25123809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 30261280 - 30261333
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||  ||||||||||||||||||| ||||||||||    
T  30261280 tcagtttccaatgcaataataatgttttcttttcaattgtacccttcaattaat 30261333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 34316243 - 34316296
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| ||||||||| ||||| |||||||||||||| ||||||||||    
T  34316243 tcagtttccaatgcaataataattttttattttcaattgtacccttcaattaat 34316296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 34413679 - 34413630
Alignment:
Q  215 tttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||| ||| ||||||||||||||| |||||||||||||||||||||||||    
T  34413679 tttcaaatgcaataataactttttattttcaattgtaccattcaattaat 34413630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 37624577 - 37624630
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||||||||||||||||||||| | | ||||||||    
T  37624577 tcagtttccaatgcaataataactttttcttttcaattgtatcctccaattaat 37624630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 41920445 - 41920392
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||  ||||||||||||||||||||||||| |||| ||||||||||    
T  41920445 tcagtttccaaagcaataataactttttcttttcaattatacccttcaattaat 41920392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 256
Target Start/End: Original strand, 44061033 - 44061074
Alignment:
Q  215 tttccaatacaataataactttttcttttcaattgtaccatt 256  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  44061033 tttctaatacaataataactttttcttttcaattgtaccatt 44061074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 45043724 - 45043671
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||| ||||||||| |||||||||||||||||||| ||||||||||    
T  45043724 tcagttttcaatgcaataataattttttcttttcaattgtacccttcaattaat 45043671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 52848186 - 52848137
Alignment:
Q  215 tttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||| ||||||||| |||||||||||||||||||| ||||||||||    
T  52848186 tttccaatgcaataataattttttcttttcaattgtacccttcaattaat 52848137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 56373713 - 56373660
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||| |||| |||||||| |||||||||||||||||||| ||||||||||    
T  56373713 tcagtttctaatataataataattttttcttttcaattgtacccttcaattaat 56373660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 18430023 - 18430063
Alignment:
Q  224 caataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  18430023 caataataactttttcttttcaattgtacccttcaattaat 18430063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 264
Target Start/End: Original strand, 11364261 - 11364300
Alignment:
Q  225 aataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  11364261 aataataactttttcttttcaattgtacccttcaattaat 11364300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 29519659 - 29519608
Alignment:
Q  213 agtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||| ||||||||||||||| |||||||||||| | ||||||||||    
T  29519659 agtttccaatgcaataataactttttattttcaattgtatccttcaattaat 29519608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 264
Target Start/End: Complemental strand, 44868369 - 44868334
Alignment:
Q  229 ataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||||||||||||||||||||||||||||||    
T  44868369 ataactttttcttttcaattgtaccattcaattaat 44868334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 50623106 - 50623157
Alignment:
Q  213 agtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||| |||| ||||||||||||||||||||||||| |||| ||||||||||    
T  50623106 agttttcaatgcaataataactttttcttttcaattatacccttcaattaat 50623157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 29370624 - 29370678
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgta-ccattcaattaat 264  Q
    ||||||| ||||| ||||||||||||||||||||||||||| || ||||||||||    
T  29370624 tcagttttcaatataataataactttttcttttcaattgtatcctttcaattaat 29370678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 264
Target Start/End: Complemental strand, 54042316 - 54042266
Alignment:
Q  214 gtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||  |||||||| |||||||||||||||||||| ||||||||||    
T  54042316 gtttccaatgtaataataattttttcttttcaattgtacctttcaattaat 54042266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 2728534 - 2728481
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||||||||||||||||  ||||| |||| |||||    
T  2728534 tcagtttccaatgcaataataactttttcttttcaacagtacccttcagttaat 2728481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 7906132 - 7906079
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||  | |||||||||||||||||||||||||||||| | ||||||||    
T  7906132 tcagtttccggtgcaataataactttttcttttcaattgtaccctccaattaat 7906079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 20448060 - 20448113
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||| ||||||||| ||||||||||||||| |||| ||||||||||    
T  20448060 tcagttttcaatgcaataataattttttcttttcaattatacccttcaattaat 20448113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 22220487 - 22220442
Alignment:
Q  219 caatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||| |||||||||||||||||||||||||||||| | ||||||||    
T  22220487 caatgcaataataactttttcttttcaattgtaccctccaattaat 22220442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 49080600 - 49080560
Alignment:
Q  224 caataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  49080600 caataataactttttattttcaattgtacccttcaattaat 49080560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 253
Target Start/End: Original strand, 25231200 - 25231238
Alignment:
Q  215 tttccaatacaataataactttttcttttcaattgtacc 253  Q
    |||||||| ||||||||||||||||||||| ||||||||    
T  25231200 tttccaatgcaataataactttttcttttctattgtacc 25231238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 264
Target Start/End: Complemental strand, 38991894 - 38991844
Alignment:
Q  214 gtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||| |||||||||||||||||||| |||||||   ||||||||||    
T  38991894 gtttccaatgcaataataactttttcttttgaattgtattcttcaattaat 38991844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 40011010 - 40010956
Alignment:
Q  211 tcagtttccaatacaataataactt-tttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||| ||||| ||| |||||||||||||| ||||||||||    
T  40011010 tcagtttccaatgcaataacaacttcttttttttcaattgtacccttcaattaat 40010956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 264
Target Start/End: Complemental strand, 47458498 - 47458468
Alignment:
Q  234 tttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||||||||||||||||||||||    
T  47458498 tttttcttttcaattgtaccattcaattaat 47458468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 52253866 - 52253922
Alignment:
Q  211 tcagtttccaatacaataataactttttc---ttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||||| |||   |||||||||||||| ||||||||||    
T  52253866 tcagtttccaatgcaataataacttcttctttttttcaattgtacccttcaattaat 52253922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 6991397 - 6991345
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||||||||||||| ||||||||||||| |||||| |||| |||||    
T  6991397 tcagttttcaatacaataataattttttcttttcaa-tgtacccttcagttaat 6991345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 8971063 - 8971116
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| ||||  |||||||| |||||||||||||||||||  ||||||||||    
T  8971063 tcagttttcaatgaaataataattttttcttttcaattgtactcttcaattaat 8971116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 30780255 - 30780218
Alignment:
Q  224 caataataactttttcttttcaattgtaccattcaatt 261  Q
    |||||||||||||||||||||||||||||  |||||||    
T  30780255 caataataactttttcttttcaattgtactcttcaatt 30780218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 31917977 - 31918030
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||| ||||||| ||||||||  ||||||||||||||| |||| ||||||||||    
T  31917977 tcagcttccaatgcaataatagttttttcttttcaattttacccttcaattaat 31918030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 264
Target Start/End: Complemental strand, 50621278 - 50621241
Alignment:
Q  227 taataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||||||||||||| || ||||||||||||    
T  50621278 taataactttttcttttcaattatatcattcaattaat 50621241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 53814625 - 53814580
Alignment:
Q  219 caatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||| ||||||||||||||| |||| ||||||||| ||||||||||    
T  53814625 caatgcaataataactttttatttttaattgtacccttcaattaat 53814580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 620312 - 620260
Alignment:
Q  213 agtttccaatacaataataacttttt-cttttcaattgtaccattcaattaat 264  Q
    |||||| ||| ||||||||| ||||| ||||||||||||||| ||||||||||    
T  620312 agtttctaatgcaataataatttttttcttttcaattgtacccttcaattaat 620260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 46392184 - 46392144
Alignment:
Q  224 caataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||| ||||||||||||||| |||| ||||||||||    
T  46392184 caataataattttttcttttcaattatacctttcaattaat 46392144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 2e-19; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 44108620 - 44108673
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  44108620 tcagtttccaatacaataataactttttcttttcaattgtacccttcaattaat 44108673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 15823055 - 15823108
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  15823055 tcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaat 15823108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 29567917 - 29567970
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  29567917 tcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaat 29567970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 50094250 - 50094303
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  50094250 tcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaat 50094303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 264
Target Start/End: Original strand, 27209013 - 27209063
Alignment:
Q  214 gtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  27209013 gtttccaatgcaataataactttttattttcaattgtaccattcaattaat 27209063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 265
Target Start/End: Complemental strand, 44557174 - 44557120
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaatg 265  Q
    ||||| |||||| |||||||||| |||||||||||||||||||||||||||||||    
T  44557174 tcagtctccaatgcaataataacattttcttttcaattgtaccattcaattaatg 44557120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 1740771 - 1740718
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||||||  |||||||||||||| |||||||||||||||||||||||||    
T  1740771 tcagtttccaatgaaataataactttttattttcaattgtaccattcaattaat 1740718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 2610960 - 2610907
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||||||||||||| |||||||||||||||||| ||||||||||||    
T  2610960 tcagttttcaatacaataataattttttcttttcaattgtaacattcaattaat 2610907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 9915464 - 9915517
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| ||||||||| |||||||||||||||||||| ||||||||||    
T  9915464 tcagtttccaatgcaataataaatttttcttttcaattgtacccttcaattaat 9915517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 16757324 - 16757271
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||||| ||||||||||||||||| ||||||||||    
T  16757324 tcagtttccaatgcaataataacttattcttttcaattgtacccttcaattaat 16757271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 26595199 - 26595146
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||| ||||||||| |||||||||||||||||||||||||||||||    
T  26595199 tcagtttacaatgcaataataaatttttcttttcaattgtaccattcaattaat 26595146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 32807068 - 32807015
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||| ||||    
T  32807068 tcagtttccaatgcaataataactttttcttttcaattgtacccttcaaataat 32807015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 35848063 - 35848010
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||| |||||||||||||||||||||||||||||| ||||||||||    
T  35848063 tcagtttacaatgcaataataactttttcttttcaattgtacctttcaattaat 35848010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 49468841 - 49468788
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  49468841 tcagtttccaatgcaataataacattttcttttcaattgtacccttcaattaat 49468788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 50249331 - 50249384
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||||||||||||||||||||||| | ||||||||    
T  50249331 tcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaat 50249384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 12591210 - 12591159
Alignment:
Q  213 agtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||| |||||||||||||||||||||||||||||| | ||||||||    
T  12591210 agtttccaatgcaataataactttttcttttcaattgtaccctccaattaat 12591159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 34047363 - 34047312
Alignment:
Q  213 agtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||| |||||||||||||||||||||||||||||| | ||||||||    
T  34047363 agtttccaatgcaataataactttttcttttcaattgtaccctccaattaat 34047312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 262
Target Start/End: Original strand, 34110548 - 34110599
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaatta 262  Q
    |||||||||||| |||||||||||||||||||| ||||||||| ||||||||    
T  34110548 tcagtttccaatgcaataataactttttctttttaattgtacccttcaatta 34110599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 264
Target Start/End: Complemental strand, 48025381 - 48025331
Alignment:
Q  214 gtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  48025381 gtttccaatgcaataataactttttcgtttcaattgtacccttcaattaat 48025331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 252
Target Start/End: Original strand, 24483409 - 24483450
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtac 252  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  24483409 tcagtttccaatacaataataactgtttcttttcaattgtac 24483450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 25487109 - 25487162
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||| |||||||||||||||||||||||||||||| | ||||||||    
T  25487109 tcagttttcaatgcaataataactttttcttttcaattgtaccctccaattaat 25487162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 25561002 - 25560949
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| ||||||||| ||||||||||||||| |||| ||||||||||    
T  25561002 tcagtttccaatgcaataataattttttcttttcaattatacctttcaattaat 25560949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 26755241 - 26755293
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||||||||| |||||||||||||||||||||| |||| ||||||||||    
T  26755241 tcagtttccaatacattaataactttttcttttcaatt-tacccttcaattaat 26755293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 27720979 - 27721032
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| ||||| ||||||||||||||||||||||||||||| | ||||||||    
T  27720979 tcagttttcaatataataataactttttcttttcaattgtaccctccaattaat 27721032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 31798610 - 31798663
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||| |||||||||||||||||||||||||||| |||| || |||||||    
T  31798610 tcagtttccgatacaataataactttttcttttcaattataccttttaattaat 31798663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 34032210 - 34032157
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| ||||||||| |||||||||||||||||||| | ||||||||    
T  34032210 tcagtttccaatgcaataataattttttcttttcaattgtaccgtccaattaat 34032157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 46554819 - 46554872
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||| | ||||||||||||||| |||||||||||||| ||||||||||    
T  46554819 tcagtttccactgcaataataactttttattttcaattgtacccttcaattaat 46554872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 252
Target Start/End: Complemental strand, 49403001 - 49402960
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtac 252  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  49403001 tcagtttccaatgcaataataactttttcttttcaattgtac 49402960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 49900883 - 49900834
Alignment:
Q  215 tttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||| ||||||||||||||||||| |||||||||||||| ||||||||||    
T  49900883 tttcaaatacaataataactttttattttcaattgtacctttcaattaat 49900834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 262
Target Start/End: Original strand, 25151839 - 25151887
Alignment:
Q  214 gtttccaatacaataataactttttcttttcaattgtaccattcaatta 262  Q
    ||||||||| |||||||||| ||||||||||||||||||| ||||||||    
T  25151839 gtttccaatgcaataataacattttcttttcaattgtacccttcaatta 25151887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 48009044 - 48009084
Alignment:
Q  224 caataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  48009044 caataataactttttcttttcaattgtaccgttcaattaat 48009084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 264
Target Start/End: Complemental strand, 24611636 - 24611597
Alignment:
Q  225 aataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  24611636 aataataactttttcttttcaattgtacccttcaattaat 24611597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 26352209 - 26352158
Alignment:
Q  213 agtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||| |||| |||||||||||||||||||||||||||||| | ||||||||    
T  26352209 agttttcaatgcaataataactttttcttttcaattgtaccctccaattaat 26352158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 264
Target Start/End: Complemental strand, 12484751 - 12484705
Alignment:
Q  218 ccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||||||||||||||||||||||| |||||| | ||||||||    
T  12484751 ccaatacaataataactttttcttttcaactgtaccctccaattaat 12484705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 13408395 - 13408353
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtacc 253  Q
    ||||||| |||| ||||||||||||||||||||||||||||||    
T  13408395 tcagttttcaatgcaataataactttttcttttcaattgtacc 13408353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 14593450 - 14593408
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtacc 253  Q
    |||||||||||| ||||||||| ||||||||||||||||||||    
T  14593450 tcagtttccaatgcaataataattttttcttttcaattgtacc 14593408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 44258637 - 44258595
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtacc 253  Q
    |||||||||||| ||||||||| ||||||||||||||||||||    
T  44258637 tcagtttccaatgcaataataattttttcttttcaattgtacc 44258595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 252
Target Start/End: Original strand, 5463596 - 5463637
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtac 252  Q
    |||||||||||| |||| ||||||||||||||||||||||||    
T  5463596 tcagtttccaatgcaattataactttttcttttcaattgtac 5463637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 10842801 - 10842854
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||| |||||||||| ||||||||||||||||||  ||||||||||    
T  10842801 tcagttttcaatgcaataataacattttcttttcaattgtactcttcaattaat 10842854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 18794672 - 18794619
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||| ||| |||||||||||||||||||||| ||| ||| ||||||||||    
T  18794672 tcagtttcgaatgcaataataactttttcttttcagttgcacccttcaattaat 18794619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 24884440 - 24884489
Alignment:
Q  215 tttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||| ||||||||||||||| ||||||||| |||| ||||||||||    
T  24884440 tttccaatgcaataataactttttattttcaattatacccttcaattaat 24884489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 40717426 - 40717373
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||| ||||||||| ||||||||||||| |||||| ||||||||||    
T  40717426 tcagttttcaatgcaataataattttttcttttcaactgtacccttcaattaat 40717373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 43759353 - 43759406
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| | || ||||||||| |||||||||||||||||||| ||||||||||    
T  43759353 tcagttttcgatgcaataataattttttcttttcaattgtacccttcaattaat 43759406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 46286940 - 46286895
Alignment:
Q  219 caatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||| |||||||||||||||||||||||||| ||| ||||||||||    
T  46286940 caatgcaataataactttttcttttcaattgcacccttcaattaat 46286895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 219 - 252
Target Start/End: Complemental strand, 51244959 - 51244926
Alignment:
Q  219 caatacaataataactttttcttttcaattgtac 252  Q
    ||||||||||||||||||||||||||||||||||    
T  51244959 caatacaataataactttttcttttcaattgtac 51244926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 52024364 - 52024311
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||| ||||||||| |||||||||||||||||||| | ||||||||    
T  52024364 tcagttttcaatgcaataataaatttttcttttcaattgtaccctccaattaat 52024311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 52125266 - 52125213
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| ||||||||| ||||| || ||||||||||| ||||||||||    
T  52125266 tcagtttccaatgcaataataattttttattctcaattgtacccttcaattaat 52125213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 258
Target Start/End: Original strand, 4985 - 5017
Alignment:
Q  226 ataataactttttcttttcaattgtaccattca 258  Q
    |||||||||||||||||||||||||||||||||    
T  4985 ataataactttttcttttcaattgtaccattca 5017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 264
Target Start/End: Complemental strand, 7191323 - 7191284
Alignment:
Q  225 aataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||||||||||||||| |||| ||||||||||    
T  7191323 aataataactttttcttttcaattatacctttcaattaat 7191284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 264
Target Start/End: Complemental strand, 31699405 - 31699366
Alignment:
Q  225 aataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||| |||||||||||||||||||| ||||||||||    
T  31699405 aataataattttttcttttcaattgtacccttcaattaat 31699366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 264
Target Start/End: Complemental strand, 31491885 - 31491847
Alignment:
Q  226 ataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||||||||||||||||| | ||||||||||    
T  31491885 ataataactttttcttttcaattgtatccttcaattaat 31491847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 261
Target Start/End: Complemental strand, 38531427 - 38531377
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaatt 261  Q
    |||||||||||| ||||||||| ||||||||||||||| | || |||||||    
T  38531427 tcagtttccaatgcaataataattttttcttttcaattatgcccttcaatt 38531377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 14373543 - 14373490
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| ||| ||||||||||| ||||||||| |||| | ||||||||    
T  14373543 tcagtttccaatgcaacaataactttttattttcaattataccctccaattaat 14373490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 49426545 - 49426492
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||| ||||||||| ||||||||||||| ||||||  |||||||||    
T  49426545 tcagttttcaatgcaataataattttttcttttcaactgtacccgtcaattaat 49426492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 15573628 - 15573685
Alignment:
Q  211 tcagtttccaatacaataataactttt----tcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||| ||||||||||||||    |||||||||||||||| ||||||||||    
T  15573628 tcagttttcaatgcaataataactttttttttcttttcaattgtacccttcaattaat 15573685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 9773 - 9720
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  9773 tcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaat 9720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 24872 - 24819
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  24872 tcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaat 24819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 4e-17; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 31418643 - 31418590
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  31418643 tcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaat 31418590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 45948760 - 45948707
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  45948760 tcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaat 45948707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 211 - 263
Target Start/End: Complemental strand, 21752241 - 21752189
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaa 263  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  21752241 tcagtttccaatgcaataataactttttcgtttcaattgtaccattcaattaa 21752189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 265
Target Start/End: Original strand, 24680149 - 24680203
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaatg 265  Q
    |||||||||||| |||||||||||||||||||||||||||||| || ||||||||    
T  24680149 tcagtttccaatgcaataataactttttcttttcaattgtaccctttaattaatg 24680203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 264
Target Start/End: Original strand, 48684747 - 48684797
Alignment:
Q  214 gtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  48684747 gtttccaatgcaataataactttttcttttcaattgtacctttcaattaat 48684797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 1742012 - 1742065
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  1742012 tcagtttccaatgcaataataaccttttcttttcaattgtacccttcaattaat 1742065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 10476161 - 10476210
Alignment:
Q  215 tttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  10476161 tttccaatgcaataataactttttcttttcaattgtacccttcaattaat 10476210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 12977812 - 12977763
Alignment:
Q  215 tttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  12977812 tttccaatgcaataataactttttcttttcaattgtaccatccaattaat 12977763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 13405257 - 13405204
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||||||  ||||||||||||||||||||||||||||| ||||||||||    
T  13405257 tcagtttccaatgtaataataactttttcttttcaattgtacccttcaattaat 13405204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 24133260 - 24133207
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| ||||||||| |||||||||||||||||||| ||||||||||    
T  24133260 tcagtttccaatgcaataataattttttcttttcaattgtacccttcaattaat 24133207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 25440893 - 25440946
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||||||||||||||||||||||| | ||||||||    
T  25440893 tcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaat 25440946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 27947631 - 27947578
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||| |||||||||||||||||||||||||||||| ||||||||||    
T  27947631 tcagttttcaatgcaataataactttttcttttcaattgtacccttcaattaat 27947578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 264
Target Start/End: Original strand, 30312482 - 30312532
Alignment:
Q  214 gtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||| |||||||||||||| |||||||||||||||||||| ||||||||||    
T  30312482 gttttcaatacaataataattttttcttttcaattgtacccttcaattaat 30312532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 264
Target Start/End: Complemental strand, 33939861 - 33939811
Alignment:
Q  214 gtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||  |||||||||||||||||| |||||||||||||||||||||    
T  33939861 gtttccaatgtaataataactttttctttccaattgtaccattcaattaat 33939811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 715993 - 715940
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| ||||||||| |||||||||||||||||||| | ||||||||    
T  715993 tcagtttccaatgcaataataattttttcttttcaattgtaccctccaattaat 715940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 19105131 - 19105078
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||  ||| |||||||||||||||||||||||||||||| ||||||||||    
T  19105131 tcagtttttaatgcaataataactttttcttttcaattgtacccttcaattaat 19105078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 22298017 - 22298070
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| ||||||||||||||||||||||| |||||| |||| |||||    
T  22298017 tcagtttccaatgcaataataactttttcttttcaactgtacccttcagttaat 22298070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 23935443 - 23935495
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| ||||||||||||||||||||||| |||||| ||||||||||    
T  23935443 tcagtttccaatgcaataataactttttcttttcaa-tgtacccttcaattaat 23935495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 29531065 - 29531012
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||| ||||||||| |||||||||||||||||||| ||||||||||    
T  29531065 tcagttttcaatgcaataataattttttcttttcaattgtacccttcaattaat 29531012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 36807964 - 36808009
Alignment:
Q  219 caatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||    
T  36807964 caatacaataataactttttcttttcaattgtactcttcaattaat 36808009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 37490805 - 37490858
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||| ||||||||| |||||||||||||||||||| ||||||||||    
T  37490805 tcagttttcaatgcaataataattttttcttttcaattgtacctttcaattaat 37490858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 37502340 - 37502393
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| ||||||||||||||||||||||||| |||| | ||||||||    
T  37502340 tcagtttccaatgcaataataactttttcttttcaattttaccctccaattaat 37502393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 37815749 - 37815798
Alignment:
Q  215 tttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||||||||| ||||||||||||||| |||| ||||||||||    
T  37815749 tttccaatacaataataattttttcttttcaattatacccttcaattaat 37815798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 40753558 - 40753505
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| ||||  |||||||| |||||||||||||||||||||||||||||||    
T  40753558 tcagttttcaatgtaataataattttttcttttcaattgtaccattcaattaat 40753505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 42285929 - 42285982
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| ||||||||| ||||||||||||||| |||| ||||||||||    
T  42285929 tcagtttccaatgcaataataattttttcttttcaattatacccttcaattaat 42285982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 42880064 - 42880011
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| ||||  ||||||||||||||||||||||||||||| ||||||||||    
T  42880064 tcagttttcaatgtaataataactttttcttttcaattgtacccttcaattaat 42880011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 44453156 - 44453209
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| ||||||||||||| | |||||||||||||| ||||||||||    
T  44453156 tcagtttccaatgcaataataactttcttttttcaattgtacccttcaattaat 44453209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 41137751 - 41137799
Alignment:
Q  213 agtttccaatacaataataactttttcttttcaattgtaccattcaatt 261  Q
    |||||||||| ||||||||| |||||||||||||||||||| |||||||    
T  41137751 agtttccaatgcaataataattttttcttttcaattgtacccttcaatt 41137799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 264
Target Start/End: Complemental strand, 6563530 - 6563491
Alignment:
Q  225 aataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  6563530 aataataactttttcttttcaattgtacccttcaattaat 6563491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 265
Target Start/End: Original strand, 10599234 - 10599288
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaatg 265  Q
    ||||||| |||| |||||||||||||||||||||||||||||  ||| |||||||    
T  10599234 tcagttttcaatgcaataataactttttcttttcaattgtacttttctattaatg 10599288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 8604000 - 8604049
Alignment:
Q  215 tttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||| ||||||||||||||||||||||||  |||| ||||||||||    
T  8604000 tttccaatgcaataataactttttcttttcaatgatacccttcaattaat 8604049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 18292360 - 18292409
Alignment:
Q  215 tttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||| |||||||||||||||| ||||||||||| ||| ||||||||    
T  18292360 tttccaatgcaataataactttttcctttcaattgtatcatccaattaat 18292409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 31929990 - 31929937
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||| ||||||||| |||||||||||||||||||| | ||||||||    
T  31929990 tcagttttcaatgcaataataattttttcttttcaattgtaccctccaattaat 31929937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 34274815 - 34274868
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||| ||||||||| ||||||||| | ||||||||    
T  34274815 tcagtttccaatgcaataataaccttttctttttaattgtaccctccaattaat 34274868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 262
Target Start/End: Original strand, 35777843 - 35777891
Alignment:
Q  214 gtttccaatacaataataactttttcttttcaattgtaccattcaatta 262  Q
    ||||| ||| ||||||||||||||| |||||||||||||| ||||||||    
T  35777843 gtttctaatgcaataataactttttattttcaattgtacccttcaatta 35777891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 28289238 - 28289288
Alignment:
Q  213 agtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||| |||| |||||||||| ||||||||||||||||||| ||||||||||    
T  28289238 agttttcaatgcaataataacattttcttttcaattgtacc-ttcaattaat 28289288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 34012184 - 34012235
Alignment:
Q  213 agtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||||  | |||||||||||| |||||||||||||| ||||||||||    
T  34012184 agtttccaatgtactaataacttttttttttcaattgtacccttcaattaat 34012235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 18270598 - 18270652
Alignment:
Q  211 tcagtttccaatacaataataactttttc-ttttcaattgtaccattcaattaat 264  Q
    |||||||||||| ||||||||||||||||  ||||||||||||| | ||||||||    
T  18270598 tcagtttccaatgcaataataactttttcactttcaattgtaccctccaattaat 18270652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 1031176 - 1031229
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||| | |||||||||| |||| |||||||||||||  ||||||||||    
T  1031176 tcagtttccattgcaataataacattttattttcaattgtactcttcaattaat 1031229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 6747248 - 6747300
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||| ||||||||| ||||||||| | ||||||||    
T  6747248 tcagtttccaatgcaataataac-ttttctttttaattgtaccctccaattaat 6747300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 21819305 - 21819357
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||||||||||||| || || |||||||||||| ||||||||||||    
T  21819305 tcagttttcaatacaataataaattctt-ttttcaattgtatcattcaattaat 21819357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 27935788 - 27935841
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||| ||||||||||||||| | |||||||||| |||| |||||||    
T  27935788 tcagttttcaatgcaataataactttttatcttcaattgtatcatttaattaat 27935841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 42753733 - 42753781
Alignment:
Q  215 tttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||||||||||  |||||||||||| ||||| ||||||||||    
T  42753733 tttccaatacaataataacactttcttttcaatcgtacc-ttcaattaat 42753781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 44567163 - 44567118
Alignment:
Q  219 caatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||| ||||||||| |||||||||||||||||| ||| ||||||||    
T  44567163 caatgcaataataaatttttcttttcaattgtatcatccaattaat 44567118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 16564884 - 16564844
Alignment:
Q  224 caataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||||||||| ||||||||| || ||||||||||||    
T  16564884 caataataactttttattttcaattatagcattcaattaat 16564844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 16600778 - 16600818
Alignment:
Q  224 caataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||||||||| ||||||||| || ||||||||||||    
T  16600778 caataataactttttattttcaattatagcattcaattaat 16600818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 4e-17; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 14620626 - 14620573
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  14620626 tcagtttccaatgcaataataactttttcttttcaattgtacctttcaattaat 14620573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 39566204 - 39566257
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  39566204 tcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaat 39566257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 3306141 - 3306088
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| ||||||||| |||||||||||||||||||| ||||||||||    
T  3306141 tcagtttccaatgcaataataattttttcttttcaattgtacccttcaattaat 3306088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 6518997 - 6519050
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||| |||||||||||||||||||||||||||||| ||||||||||    
T  6518997 tcagttttcaatgcaataataactttttcttttcaattgtacccttcaattaat 6519050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 7317049 - 7317102
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||||||||||||||||||||||| | ||||||||    
T  7317049 tcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaat 7317102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 7580001 - 7579948
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| ||||||||||||||||||||||||||||||||||  ||||||||||    
T  7580001 tcagttttcaatacaataataactttttcttttcaattgtactcttcaattaat 7579948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 10345064 - 10345011
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||||||||||||||||||||||| | ||||||||    
T  10345064 tcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaat 10345011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 21319442 - 21319389
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||| ||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  21319442 tcagcttccaatgcaataataactttttcttttcaattgtacccttcaattaat 21319389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 27600420 - 27600473
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| ||||||||||||||||||||||||| |||| ||||||||||    
T  27600420 tcagtttccaatgcaataataactttttcttttcaattatacccttcaattaat 27600473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 27797802 - 27797855
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||| |||||    
T  27797802 tcagtttccaatgcaataataactttttcttttcaattgtacccttcagttaat 27797855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 34446159 - 34446106
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||    
T  34446159 tcagttttcaatacaataataacattttcttttcaattgtacccttcaattaat 34446106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 35766032 - 35765979
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | ||||||||    
T  35766032 tcagttttcaatacaataataactttttcttttcaattgtaccgtccaattaat 35765979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 42104195 - 42104142
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| ||||||||||||||||||||||||| |||| ||||||||||    
T  42104195 tcagtttccaatgcaataataactttttcttttcaattttacccttcaattaat 42104142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 215 - 263
Target Start/End: Complemental strand, 2729914 - 2729866
Alignment:
Q  215 tttccaatacaataataactttttcttttcaattgtaccattcaattaa 263  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||    
T  2729914 tttccaatgcaataataactttttcttttcaattgtacccttcaattaa 2729866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 3025061 - 3025010
Alignment:
Q  213 agtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||| |||||||||||||||||||||||||||||| | ||||||||    
T  3025061 agtttccaatgcaataataactttttcttttcaattgtaccctccaattaat 3025010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 21195402 - 21195453
Alignment:
Q  213 agtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||| ||||||||| |||||||||||||||||||| ||||||||||    
T  21195402 agtttccaatgcaataataattttttcttttcaattgtacccttcaattaat 21195453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 4630886 - 4630939
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| ||||||||||||||||||||||||||||||||| | | ||||||||    
T  4630886 tcagttttcaatacaataataactttttcttttcaattgtatcctccaattaat 4630939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 11977609 - 11977662
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||||| |||||||||||||||||||||||||| | || |||||||    
T  11977609 tcagtttccaataccataataactttttcttttcaattgtatcctttaattaat 11977662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 26660784 - 26660829
Alignment:
Q  219 caatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||    
T  26660784 caatgcaataataactttttcttttcaattgtacccttcaattaat 26660829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 26932377 - 26932422
Alignment:
Q  219 caatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||    
T  26932377 caatgcaataataactttttcttttcaattgtacccttcaattaat 26932422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 36073754 - 36073709
Alignment:
Q  219 caatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||    
T  36073754 caatgcaataataactttttcttttcaattgtatcattcaattaat 36073709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 36164908 - 36164961
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| || |||||||||||||||||||||| |||| ||||||||||    
T  36164908 tcagtttccaatgcagtaataactttttcttttcaattatacccttcaattaat 36164961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 216 - 264
Target Start/End: Original strand, 32158586 - 32158634
Alignment:
Q  216 ttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||||||||||||||||| |||||||||||||| | ||||||||    
T  32158586 ttccaatacaataataacttttttttttcaattgtaccctccaattaat 32158634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 264
Target Start/End: Complemental strand, 29807429 - 29807394
Alignment:
Q  229 ataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||||||||||||||||||||||||||||||    
T  29807429 ataactttttcttttcaattgtaccattcaattaat 29807394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 264
Target Start/End: Complemental strand, 39335321 - 39335283
Alignment:
Q  226 ataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  39335321 ataataactttttcttttcaattgtacccttcaattaat 39335283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 13761586 - 13761631
Alignment:
Q  219 caatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||| ||||||||| |||||||||||||||||||| ||||||||||    
T  13761586 caatgcaataataaatttttcttttcaattgtacccttcaattaat 13761631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 14005913 - 14005966
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||||||||||||| |||| || | ||||||||||    
T  14005913 tcagtttccaatgcaataataactttttctttttaattttatccttcaattaat 14005966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 38369897 - 38369946
Alignment:
Q  215 tttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||| |||||||||||||||||||| ||||||||  ||||||||||    
T  38369897 tttccaatgcaataataactttttcttttaaattgtactcttcaattaat 38369946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 39729980 - 39730017
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaatt 248  Q
    |||||||||||| |||||||||||||||||||||||||    
T  39729980 tcagtttccaatgcaataataactttttcttttcaatt 39730017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 843056 - 843092
Alignment:
Q  228 aataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||| ||||||||||||||||||||||||||    
T  843056 aataacttttccttttcaattgtaccattcaattaat 843092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 13974302 - 13974345
Alignment:
Q  219 caatacaataataactttttcttttcaattgtaccattcaatta 262  Q
    |||| ||||||||| ||| |||||||||||||||||||||||||    
T  13974302 caatgcaataataattttatcttttcaattgtaccattcaatta 13974345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 214 - 264
Target Start/End: Complemental strand, 14162030 - 14161979
Alignment:
Q  214 gtttccaatacaataataactttttcttttcaa-ttgtaccattcaattaat 264  Q
    ||||| ||| ||||||||| ||||||||||||| ||||||||||||||||||    
T  14162030 gtttctaatgcaataataattttttcttttcaatttgtaccattcaattaat 14161979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 252
Target Start/End: Original strand, 24281016 - 24281055
Alignment:
Q  213 agtttccaatacaataataactttttcttttcaattgtac 252  Q
    |||||||||| ||||||||| |||||||||||||||||||    
T  24281016 agtttccaatgcaataataattttttcttttcaattgtac 24281055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 252
Target Start/End: Complemental strand, 24381196 - 24381157
Alignment:
Q  213 agtttccaatacaataataactttttcttttcaattgtac 252  Q
    |||||||||| ||||||||| |||||||||||||||||||    
T  24381196 agtttccaatgcaataataattttttcttttcaattgtac 24381157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 34209029 - 34208973
Alignment:
Q  211 tcagtttccaata---caataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||||   ||||||||||||||| ||||||||| |||| ||||||||||    
T  34209029 tcagtttccaataatgcaataataacttttttttttcaattatacccttcaattaat 34208973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 39504743 - 39504797
Alignment:
Q  211 tcagtttccaatacaat-aataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||| |||||||||||||||||||||||| | || |||||||    
T  39504743 tcagtttccaatgcaattaataactttttcttttcaattgtatcctttaattaat 39504797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 9066555 - 9066502
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||| |||||||||  ||||||||||| ||||| ||||||||||||    
T  9066555 tcagttttcaatgcaataataaaattttcttttcatttgtagcattcaattaat 9066502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 25362932 - 25362879
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||| ||| ||||||| ||||||||||||||||| |||| | ||||||||    
T  25362932 tcagtttcgaatgcaataatgactttttcttttcaattttaccctccaattaat 25362879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 264
Target Start/End: Original strand, 34534384 - 34534433
Alignment:
Q  216 ttccaatacaataataactttt-tcttttcaattgtaccattcaattaat 264  Q
    ||||||| ||||||||| |||| |||||||||||||||| ||||||||||    
T  34534384 ttccaatgcaataataatttttttcttttcaattgtacccttcaattaat 34534433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 260
Target Start/End: Complemental strand, 34972770 - 34972725
Alignment:
Q  215 tttccaatacaataataactttttcttttcaattgtaccattcaat 260  Q
    |||||||| ||||||||| ||||| |||| ||||||||||||||||    
T  34972770 tttccaatgcaataataattttttatttttaattgtaccattcaat 34972725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 264
Target Start/End: Complemental strand, 891132 - 891092
Alignment:
Q  225 aataataactttttctttt-caattgtaccattcaattaat 264  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  891132 aataataattttttctttttcaattgtaccattcaattaat 891092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 4e-17; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 50646239 - 50646186
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  50646239 tcagtttccaatgcaataataactttttcttttcaattgtaccatttaattaat 50646186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 41850413 - 41850464
Alignment:
Q  213 agtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  41850413 agtttccaatgcaataataactttttcttttcaattgtacccttcaattaat 41850464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 2458028 - 2458081
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||||||||||||||||||||||||||| |||| |||| ||||||||||    
T  2458028 tcagtttccaatacaataataactttttctttttaattatacccttcaattaat 2458081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 3152935 - 3152882
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||| |||||||||||||||||||||||||||||| ||||||||||    
T  3152935 tcagttttcaatgcaataataactttttcttttcaattgtacccttcaattaat 3152882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 4392217 - 4392270
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||||||  ||||||||||||||||||||||||||||| ||||||||||    
T  4392217 tcagtttccaatttaataataactttttcttttcaattgtacccttcaattaat 4392270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 4759016 - 4759065
Alignment:
Q  215 tttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  4759016 tttccaatgcaataataactttttcttttcaattgtacctttcaattaat 4759065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 11393570 - 11393619
Alignment:
Q  215 tttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  11393570 tttccaatgcaataataactttttcttttcaattgtacccttcaattaat 11393619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 30426453 - 30426400
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||||||||||||| ||||||||| ||||||||||    
T  30426453 tcagtttccaatgcaataataactttttctttttaattgtacccttcaattaat 30426400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 33024429 - 33024376
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||    
T  33024429 tcagtttccaatgcaataataactttatcttttcaattgcaccattcaattaat 33024376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 36729935 - 36729886
Alignment:
Q  215 tttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  36729935 tttccaatgcaataataactttttcttttcaattgtacccttcaattaat 36729886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 38016396 - 38016448
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  38016396 tcagtttccaatgcaataataactttttcttttcaattgtacc-ttcaattaat 38016448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 40487853 - 40487902
Alignment:
Q  215 tttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  40487853 tttccaatgcaataataactttttcttttcaattgtacctttcaattaat 40487902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 45213851 - 45213798
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||| ||| |||||||||||||||||||||||||||||| ||||||||||    
T  45213851 tcagtttctaatgcaataataactttttcttttcaattgtacccttcaattaat 45213798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 45566828 - 45566873
Alignment:
Q  219 caatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  45566828 caatacaataataactttttcttttcaattgtatcattcaattaat 45566873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 48901741 - 48901794
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||||||||||||||||||||||| | ||||||||    
T  48901741 tcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaat 48901794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 48903307 - 48903360
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||||||||||||||||||||||| | ||||||||    
T  48903307 tcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaat 48903360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 216 - 264
Target Start/End: Original strand, 27067634 - 27067682
Alignment:
Q  216 ttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  27067634 ttccaatgcaataataactttttcttttcaattgtacccttcaattaat 27067682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 42571657 - 42571605
Alignment:
Q  212 cagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||||| |||||||||||||||||||||||||||||| | ||||||||    
T  42571657 cagtttccaatgcaataataactttttcttttcaattgtaccctccaattaat 42571605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 262
Target Start/End: Complemental strand, 35557887 - 35557836
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaatta 262  Q
    |||||||||||| ||||||||| |||||||||||||||||||| ||||||||    
T  35557887 tcagtttccaatgcaataataattttttcttttcaattgtacctttcaatta 35557836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 42072008 - 42072059
Alignment:
Q  213 agtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||| ||||||||||||||||||||||| |||||| ||||||||||    
T  42072008 agtttccaatgcaataataactttttcttttcaactgtacccttcaattaat 42072059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 50088443 - 50088392
Alignment:
Q  213 agtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||| ||||| |||||||||||||||||||||||| ||||||||||    
T  50088443 agtttccaatgcaatagtaactttttcttttcaattgtacccttcaattaat 50088392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 210 - 264
Target Start/End: Complemental strand, 30934939 - 30934885
Alignment:
Q  210 atcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||  |||||||||    
T  30934939 atcagtttccaatgcaataataattttttcttttcaattgtacccctcaattaat 30934885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 32492302 - 32492257
Alignment:
Q  219 caatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||    
T  32492302 caatgcaataataactttttcttttcaattataccattcaattaat 32492257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 36460827 - 36460880
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||| |||||||||||||||||||||||||| ||| ||||||||||    
T  36460827 tcagttttcaatgcaataataactttttcttttcaattgcacccttcaattaat 36460880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 36844871 - 36844818
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||| ||||||||| |||||||||||||||||| ||||||||||||    
T  36844871 tcagttttcaatgcaataataattttttcttttcaattgtatcattcaattaat 36844818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 39356906 - 39356959
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||| |||||||||| ||||||||||||||||||| ||||||||||    
T  39356906 tcagttttcaatgcaataataacattttcttttcaattgtacctttcaattaat 39356959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 44676242 - 44676295
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||| ||||||||||||||||||||||||| | ||||||||    
T  44676242 tcagtttccaatgcaatgataactttttcttttcaattgtaccctccaattaat 44676295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 47895469 - 47895420
Alignment:
Q  215 tttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||| ||||||||||||||||||||||||| |||| ||||||||||    
T  47895469 tttccaatgcaataataactttttcttttcaattatacccttcaattaat 47895420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 50038300 - 50038247
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||| |||||||||||||||||||||||||||||| | ||||||||    
T  50038300 tcagttttcaatgcaataataactttttcttttcaattgtaccctccaattaat 50038247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 7231012 - 7230972
Alignment:
Q  224 caataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  7231012 caataataactttttcttttcaattgtatcattcaattaat 7230972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 264
Target Start/End: Original strand, 51398045 - 51398084
Alignment:
Q  225 aataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  51398045 aataataactttttcttttcaattgtacccttcaattaat 51398084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 53200807 - 53200757
Alignment:
Q  213 agtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||| |||| |||||||||||||||||||||||||||| ||||||||||||    
T  53200807 agttttcaatgcaataataactttttcttttcaattgta-cattcaattaat 53200757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 30431141 - 30431194
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||| ||||||||| |||||||||||||||||| | ||||||||||    
T  30431141 tcagttttcaatgcaataataattttttcttttcaattgtaaccttcaattaat 30431194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 33194160 - 33194107
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||| |||||||||| |||| ||||||||| ||||||||||    
T  33194160 tcagtttccaatgcaatgataactttttatttttaattgtacccttcaattaat 33194107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 45460692 - 45460737
Alignment:
Q  219 caatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||    
T  45460692 caatacaataataactctttcttttcaattgtaccctccaattaat 45460737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 19115410 - 19115450
Alignment:
Q  213 agtttccaatacaataataactttttcttttcaattgtacc 253  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  19115410 agtttccaatgcaataataactttttcttttcaattatacc 19115450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 264
Target Start/End: Original strand, 19373621 - 19373660
Alignment:
Q  225 aataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||||| |||||||||||||| ||||||||||    
T  19373621 aataataactttttattttcaattgtacccttcaattaat 19373660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 264
Target Start/End: Original strand, 22857125 - 22857164
Alignment:
Q  225 aataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||||||||||||||||||||||  ||||||||||    
T  22857125 aataataactttttcttttcaattgtactgttcaattaat 22857164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 31853689 - 31853638
Alignment:
Q  213 agtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||| ||||||||||| ||||||||||  |||||||| ||||||||||    
T  31853689 agtttccagtacaataataattttttcttttttattgtacccttcaattaat 31853638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 47137986 - 47138037
Alignment:
Q  213 agtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||| |||| ||||||||||||||| |||||||||||||| ||||| ||||    
T  47137986 agttttcaatgcaataataactttttattttcaattgtacccttcaaataat 47138037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 211 - 246
Target Start/End: Original strand, 52654325 - 52654360
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaa 246  Q
    ||||||| ||||||||||||||||||||||||||||    
T  52654325 tcagttttcaatacaataataactttttcttttcaa 52654360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 264
Target Start/End: Original strand, 30315333 - 30315383
Alignment:
Q  214 gtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||| ||| |||||||||||||||| |||| |||| ||||||||||    
T  30315333 gtttccaatgcaagaataactttttcttttgaattatacccttcaattaat 30315383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 9189564 - 9189511
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| ||||  |||||||||||||||||||||| | || ||||||||||||    
T  9189564 tcagttttcaatgaaataataactttttcttttcaaatatatcattcaattaat 9189511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 11019947 - 11019902
Alignment:
Q  219 caatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||| ||||||||| |||||||||||||| ||||| ||||||||||    
T  11019947 caatgcaataataattttttcttttcaatcgtacctttcaattaat 11019902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 23525441 - 23525392
Alignment:
Q  215 tttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||| ||||||||| ||||||||||||| | |||| ||||||||||    
T  23525441 tttccaatgcaataataagtttttcttttcaactatacccttcaattaat 23525392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 31583563 - 31583510
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||| | |||||||||  ||||||||||||||||||| | ||||||||    
T  31583563 tcagtttccagtgcaataataatcttttcttttcaattgtaccttccaattaat 31583510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 264
Target Start/End: Complemental strand, 41287609 - 41287572
Alignment:
Q  227 taataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||||||||||||| |||| ||||||||||    
T  41287609 taataactttttcttttcaattatacccttcaattaat 41287572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 248
Target Start/End: Original strand, 42886776 - 42886809
Alignment:
Q  215 tttccaatacaataataactttttcttttcaatt 248  Q
    |||||||| |||||||||||||||||||||||||    
T  42886776 tttccaatgcaataataactttttcttttcaatt 42886809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 211 - 263
Target Start/End: Complemental strand, 18386 - 18334
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaa 263  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  18386 tcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaa 18334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 6e-16; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 27964500 - 27964449
Alignment:
Q  213 agtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  27964500 agtttccaatgcaataataactttttcttttcaattgtacccttcaattaat 27964449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 264
Target Start/End: Original strand, 12342117 - 12342167
Alignment:
Q  214 gtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  12342117 gtttccaatgcaataataactttttcttttcaattgtacccttcaattaat 12342167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 265
Target Start/End: Original strand, 13562015 - 13562069
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaatg 265  Q
    |||||||| ||| |||||||||||||||||||||||||||||| |||||||||||    
T  13562015 tcagtttctaatgcaataataactttttcttttcaattgtacccttcaattaatg 13562069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 4469522 - 4469575
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| ||||||||||||||||||||||||||||||||||| || |||||||    
T  4469522 tcagttttcaatacaataataactttttcttttcaattgtacccttaaattaat 4469575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 12566112 - 12566059
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| ||||||||| ||||| |||||||||||||||||||||||||    
T  12566112 tcagtttccaatgcaataataatttttttttttcaattgtaccattcaattaat 12566059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 14285959 - 14286012
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||||||||||||||||||| |||||||||||||| | ||||||||    
T  14285959 tcagtttccaatacaataataacttttttttttcaattgtaccctccaattaat 14286012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 16463164 - 16463111
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||| |||||||||||||||||||||||||||||| ||||||||||    
T  16463164 tcagttttcaatgcaataataactttttcttttcaattgtacccttcaattaat 16463111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 18719564 - 18719511
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||| |||||||||||||||||||||||||||||| ||||||||||    
T  18719564 tcagttttcaatgcaataataactttttcttttcaattgtacccttcaattaat 18719511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 22620466 - 22620413
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||||||||||||||||||||||| | ||||||||    
T  22620466 tcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaat 22620413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 25383616 - 25383564
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  25383616 tcagtttccaatgcaataataactttttcttttcaattgtacc-ttcaattaat 25383564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 43427419 - 43427366
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||||||||||||||||||||||| | ||||||||    
T  43427419 tcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaat 43427366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 45082032 - 45081979
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| ||||||||| |||||||||||||||||||| ||||||||||    
T  45082032 tcagtttccaatgcaataataattttttcttttcaattgtacccttcaattaat 45081979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 45301786 - 45301839
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| ||||||||||||||||||||||||||||||  |||||||||    
T  45301786 tcagtttccaatgcaataataactttttcttttcaattgtacccatcaattaat 45301839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 6220534 - 6220483
Alignment:
Q  213 agtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||| ||||||||||||||||||||||| |||||| ||||||||||    
T  6220534 agtttccaatgcaataataactttttcttttcaactgtacctttcaattaat 6220483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 16807647 - 16807596
Alignment:
Q  213 agtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||| ||||||||| |||||||||||||||||||| ||||||||||    
T  16807647 agtttccaatgcaataataattttttcttttcaattgtacccttcaattaat 16807596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 16846928 - 16846877
Alignment:
Q  213 agtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||| ||||||||| |||||||||||||||||||| ||||||||||    
T  16846928 agtttccaatgcaataataattttttcttttcaattgtacccttcaattaat 16846877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 262
Target Start/End: Original strand, 43971525 - 43971576
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaatta 262  Q
    |||||||||||| ||||||||||||||||||||||||||| || ||||||||    
T  43971525 tcagtttccaatgcaataataactttttcttttcaattgtgcccttcaatta 43971576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 264
Target Start/End: Complemental strand, 441360 - 441310
Alignment:
Q  214 gtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||| |||| |||||||||||||||||||||||||||||| ||||||||||    
T  441360 gttttcaatgcaataataactttttcttttcaattgtacccttcaattaat 441310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 264
Target Start/End: Complemental strand, 7874773 - 7874723
Alignment:
Q  214 gtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||| |||||||||||||||||||||||| ||||| ||||||||||    
T  7874773 gtttccaatgcaataataactttttcttttcaatcgtacccttcaattaat 7874723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 264
Target Start/End: Complemental strand, 29396809 - 29396759
Alignment:
Q  214 gtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||| ||||||||||||||||||||||||| |||| ||||||||||    
T  29396809 gtttccaatgcaataataactttttcttttcaattatacccttcaattaat 29396759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 264
Target Start/End: Original strand, 36178000 - 36178050
Alignment:
Q  214 gtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||| ||||||||||||||| |||||||||||||| ||||||||||    
T  36178000 gtttccaatgcaataataacttttttttttcaattgtacccttcaattaat 36178050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 7644675 - 7644720
Alignment:
Q  219 caatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||    
T  7644675 caatataataataactttttcttttcaattgtacccttcaattaat 7644720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 8540059 - 8540112
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||| | |||||||||||||||||||| ||||||||| ||||||||||    
T  8540059 tcagtttccagtgcaataataactttttctttttaattgtacccttcaattaat 8540112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 30855126 - 30855178
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||| |||||||    
T  30855126 tcagtttccaatgcaataataa-tttttcttttcaattgtaccatttaattaat 30855178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 36685868 - 36685819
Alignment:
Q  215 tttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||| ||||||||||||| |||||||||||||||||||| ||||||||||    
T  36685868 tttcaaatacaataataattttttcttttcaattgtacccttcaattaat 36685819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 4133048 - 4133092
Alignment:
Q  214 gtttccaatacaataataactttttcttttcaattgtaccattca 258  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||    
T  4133048 gtttccaatgcaataataactttttcttttcaattgtacccttca 4133092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 4288842 - 4288790
Alignment:
Q  212 cagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| ||| ||||||||| |||||||||||||||| ||||||||||||||    
T  4288842 cagtttctaatgcaataataattttttcttttcaattgcaccattcaattaat 4288790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 266
Target Start/End: Complemental strand, 34546459 - 34546408
Alignment:
Q  215 tttccaatacaataataactttttcttttcaattgtaccattcaattaatga 266  Q
    |||||||| ||||||||| |||||||||| ||||||||| ||||||||||||    
T  34546459 tttccaatgcaataataattttttcttttaaattgtacccttcaattaatga 34546408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 251
Target Start/End: Original strand, 16792506 - 16792544
Alignment:
Q  213 agtttccaatacaataataactttttcttttcaattgta 251  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  16792506 agtttccaatgcaataataactttttcttttcaattgta 16792544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 7028940 - 7028891
Alignment:
Q  215 tttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||| ||||||| ||||||||||||||| |||||| ||||||||||    
T  7028940 tttccaatgcaataatgactttttcttttcaaatgtacccttcaattaat 7028891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 12394053 - 12394000
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||| ||| ||||||||||||||| |||| ||||||||| ||||||||||    
T  12394053 tcagtttctaatgcaataataactttttatttttaattgtacccttcaattaat 12394000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 15083284 - 15083231
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| |||||||||| |||| |||||||||||||  ||||||||||    
T  15083284 tcagtttccaatgcaataataacattttattttcaattgtactcttcaattaat 15083231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 17695957 - 17695904
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||||||   |||||||||||||||||||||||||||| | ||||||||    
T  17695957 tcagtttccaatgtgataataactttttcttttcaattgtaccctccaattaat 17695904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 18579188 - 18579241
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||| ||||||||| |||||||||||||||| ||| ||||||||||    
T  18579188 tcagttttcaatgcaataataattttttcttttcaattgcacccttcaattaat 18579241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 35799224 - 35799276
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| ||||||||||||||| |||||||||||||| | ||||||||    
T  35799224 tcagtttccaatgcaataataacttttt-ttttcaattgtaccctccaattaat 35799276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 38926627 - 38926680
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||| |||||||||||| || |||||||||||||| ||||||||||    
T  38926627 tcagttttcaatgcaataataacttctttttttcaattgtacccttcaattaat 38926680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 42004916 - 42004965
Alignment:
Q  215 tttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||| ||||||||| ||||| |||||||||||||| ||||||||||    
T  42004916 tttccaatgcaataataattttttattttcaattgtacccttcaattaat 42004965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 32228130 - 32228090
Alignment:
Q  224 caataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||||||||||||| ||||||| ||||||||||    
T  32228130 caataataactttttcttttcagttgtacccttcaattaat 32228090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 264
Target Start/End: Complemental strand, 4658351 - 4658312
Alignment:
Q  225 aataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||| |||||||||||||||||||| ||||||||||    
T  4658351 aataataattttttcttttcaattgtacccttcaattaat 4658312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 211 - 246
Target Start/End: Original strand, 45423639 - 45423674
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaa 246  Q
    |||||||||||| |||||||||||||||||||||||    
T  45423639 tcagtttccaatgcaataataactttttcttttcaa 45423674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 4051836 - 4051782
Alignment:
Q  211 tcagtttccaatacaataataacttttt-cttttcaattgtaccattcaattaat 264  Q
    |||||||||||| ||||||||| ||||| ||||||||||||||| | ||||||||    
T  4051836 tcagtttccaatgcaataataatttttttcttttcaattgtaccttccaattaat 4051782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 5717534 - 5717576
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtacc 253  Q
    |||||||||||| ||||||||| |||||||||| |||||||||    
T  5717534 tcagtttccaatgcaataataaatttttctttttaattgtacc 5717576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 1423212 - 1423265
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| ||||  ||||||||||| |||||||||||| |||| ||||||||||    
T  1423212 tcagttttcaatggaataataacttattcttttcaattatacccttcaattaat 1423265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 11188624 - 11188571
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||| ||| |||||||| || |||||||||||| ||||||||||||    
T  11188624 tcagttttcaatgcaacaataacttatttttttcaattgtatcattcaattaat 11188571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 29808833 - 29808886
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||| |||| ||||||||||||||||||| ||||| |||| |||||    
T  29808833 tcagttttcaatgcaatcataactttttcttttcaatcgtacccttcacttaat 29808886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 34455011 - 34455064
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||||||||| ||| ||||| |||||||||||| | ||||||||||    
T  34455011 tcagttttcaatacaatactaattttttattttcaattgtatccttcaattaat 34455064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 8774079 - 8774128
Alignment:
Q  213 agtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||||||||||||  | |||||||||||||||  ||||||||||    
T  8774079 agtttccaatacaataataac--tgtcttttcaattgtactcttcaattaat 8774128  T

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Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 8789556 - 8789507
Alignment:
Q  213 agtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||||||||||||  | |||||||||||||||  ||||||||||    
T  8789556 agtttccaatacaataataac--tgtcttttcaattgtactcttcaattaat 8789507  T

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Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 19164391 - 19164431
Alignment:
Q  224 caataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||||||||||| ||||||| | ||||||||||    
T  19164391 caataataactttttctttttaattgtatccttcaattaat 19164431  T

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Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 37038884 - 37038848
Alignment:
Q  228 aataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  37038884 aataactttttcttttcaattatacccttcaattaat 37038848  T

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Target: scaffold2107 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 645 - 592
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||    
T  645 tcagtttccaatgcaataataattttttctttacaattgtacccttcaattaat 592  T

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Target: scaffold0502 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 699 - 650
Alignment:
Q  215 tttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||||||    
T  699 tttccaatgcaataataactttttctttttaattgtacccttcaattaat 650  T

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Target: scaffold0332 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 3942 - 3889
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||| |||| |||||||||||||||||||||||||||||| | ||||||||    
T  3942 tcagttttcaatgcaataataactttttcttttcaattgtaccctccaattaat 3889  T

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Target: scaffold0015 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 21213 - 21160
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||| ||| ||||||||| |||||||||||||||||||| ||||||||||    
T  21213 tcagtttcaaatgcaataataattttttcttttcaattgtacccttcaattaat 21160  T

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Target: scaffold0078 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 1545 - 1492
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||| ||| |||| ||||||||||||||||||||||||| |||| |||||    
T  1545 tcagtttctaatgcaatgataactttttcttttcaattgtacccttcatttaat 1492  T

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Target: scaffold0048 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 62654 - 62707
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    ||||||||| ||  ||||||||||||||||||| ||||||||| ||||||||||    
T  62654 tcagtttcctatgtaataataactttttctttttaattgtacccttcaattaat 62707  T

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Target: scaffold0026 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 4170 - 4215
Alignment:
Q  219 caatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||| ||||||||| |||||||||||||||||||| ||||||||||    
T  4170 caatgcaataataattttttcttttcaattgtacccttcaattaat 4215  T

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Target: scaffold0983 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 818 - 765
Alignment:
Q  211 tcagtttccaatacaataataactttttcttttcaattgtaccattcaattaat 264  Q
    |||||||||| |  |||||||| |||||||||||||||||||| || |||||||    
T  818 tcagtttccactggaataataattttttcttttcaattgtaccctttaattaat 765  T

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Target: scaffold0300 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 260
Target Start/End: Original strand, 4599 - 4635
Alignment:
Q  224 caataataactttttcttttcaattgtaccattcaat 260  Q
    ||||||||| |||||||||||||||||||| ||||||    
T  4599 caataataattttttcttttcaattgtacctttcaat 4635  T

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