View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12773_high_16 (Length: 256)
Name: NF12773_high_16
Description: NF12773
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12773_high_16 |
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Alignment Details
Target: chr3 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 17 - 236
Target Start/End: Original strand, 41723794 - 41724013
Alignment:
| Q |
17 |
caaaggctagaaggaagcatgctgagcatgaaacagaaaagtggagagaagcttcagaaggaaaacatgacagacattcctttaaaaacatgttgatgaa |
116 |
Q |
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| T |
41723794 |
caaaggctagaaggaagcatgctgagcatgaaacagaaaagtggagagaagcttcagaaggaaaacatgacagacattcctttaaaaacatgttgatgaa |
41723893 |
T |
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| Q |
117 |
cttgagttctaggaaggatgttttccctagttcaagaggcatgcagcatagttcttcaaccggctcctcacatatttcaaatgaacaagaacaattttcg |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41723894 |
cttgagttctaggaaggatgttttccctagttcaagaggcatgcagcatagttcttcaaccggctcctcacatatttcaaatgaacaagaacaattttcg |
41723993 |
T |
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| Q |
217 |
cctatttctgatcactactt |
236 |
Q |
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|||||||||||||||||||| |
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| T |
41723994 |
cctatttctgatcactactt |
41724013 |
T |
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