View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12779_high_29 (Length: 251)
Name: NF12779_high_29
Description: NF12779
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12779_high_29 |
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Alignment Details
Target: chr2 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 9 - 245
Target Start/End: Complemental strand, 32531652 - 32531416
Alignment:
| Q |
9 |
aaaaacactcaaacaaagaaatcaacacatgttctcctatttcacacatgacaaggatttatactccttttcatactaagaactctacatgtgaagattt |
108 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
32531652 |
aaaaacactcaaacaaagaaatcaacacatgttctcctatttcacacatgacaaggatttatagtccttttcatactaagaactctacatgtgaagattt |
32531553 |
T |
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| Q |
109 |
aggaatatatatcacttataaaataaaaaattaaagatgaatattcaagtttcatagcttcaaattgagatcaagagtatctcccacttcatgaccattc |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
32531552 |
aggaatatatatcacttataaaataaaaaattaaagatgaatattcaagtttcatagcttcaaattgagatcaagagtatctcccatttcatgaccattc |
32531453 |
T |
|
| Q |
209 |
tgatttctggatgtttgtccattttgtgtctctgctg |
245 |
Q |
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||| ||||||||||||||||||||||||||||||||| |
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| T |
32531452 |
tgagttctggatgtttgtccattttgtgtctctgctg |
32531416 |
T |
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