View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1277D-Insertion-8 (Length: 768)
Name: NF1277D-Insertion-8
Description: NF1277D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1277D-Insertion-8 |
 | |
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| [»] chr7 (10 HSPs) |
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| [»] chr3 (14 HSPs) |
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| [»] scaffold0252 (1 HSPs) |
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| [»] chr8 (10 HSPs) |
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| [»] chr6 (8 HSPs) |
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| [»] chr1 (6 HSPs) |
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| [»] chr2 (7 HSPs) |
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| [»] chr4 (8 HSPs) |
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| [»] scaffold0789 (2 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 240; Significance: 1e-132; HSPs: 10)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 477 - 768
Target Start/End: Complemental strand, 8119209 - 8118918
Alignment:
| Q |
477 |
acaggcattggtatttgtattcgcgactcggagggtagttttgttctggctaagaccaatacttacccttgtatggtttcggtggatgttggagaagctt |
576 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
8119209 |
acaggtattggtatttgtattcgcgactcggagggtagttttgttctggctaagaccaatacttacccttgtatggtctcggtggatgttggagaagctt |
8119110 |
T |
|
| Q |
577 |
tagggctgcactctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtgacagattctaaagtaacagttgatgccttcctttctac |
676 |
Q |
| |
|
||||| |||||||||||||| | |||||||||||||||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||| |
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|
| T |
8119109 |
tagggttgcactctgctttgtagtggttgggtgatatgcagcttgataatgtggattttgtgactgattccaaagtaacagttgatgccttcctttctac |
8119010 |
T |
|
| Q |
677 |
acggaacgacctgtctgaatttggttctattatttcttcttgtcgttctttgtatcataatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||| |
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|
| T |
8119009 |
acggaacgacctatctgaatttggttctattatttcttcttgtcgttctttgtaccgtaatttatttttcaactctagggtggagtttgtta |
8118918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 489 - 768
Target Start/End: Original strand, 41601175 - 41601454
Alignment:
| Q |
489 |
atttgtattcgcgactcggagggtagttttgttctggctaagaccaatacttacccttgtatggtttcggtggatgttggagaagctttagggctgcact |
588 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| ||||||||||| | ||| | |||||||| ||||| |||||||||||||||||||||||| |||||| |
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|
| T |
41601175 |
atttgtattcgcgactcggaaggtagttttgtactggctaagactattacatctccttgtattgtttctgtggatgttggagaagctttagggttgcact |
41601274 |
T |
|
| Q |
589 |
ctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtgacagattctaaagtaacagttgatgccttcctttctacacggaacgacct |
688 |
Q |
| |
|
||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||| |
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|
| T |
41601275 |
ctgctttgcaatggttgagtgatatgcagctggataatgtggactttgcaacagattctaaagtaacagttgatgtcttcctttctacacggaacaacct |
41601374 |
T |
|
| Q |
689 |
gtctgaatttggttctattatttcttcttgtcgttctttgtatcataatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||| || |||||||||||| |||||||||||||||||||||| |
|
|
| T |
41601375 |
gtctgaatttggttctattatttcttcctgtcgttctttgtttcgtaatttattttctaactctagggtggagtttgtta |
41601454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 483 - 768
Target Start/End: Complemental strand, 4646356 - 4646071
Alignment:
| Q |
483 |
attggtatttgtattcgcgactcggagggtagttttgttctggctaagaccaatacttacccttgtatggtttcggtggatgttggagaagctttagggc |
582 |
Q |
| |
|
||||| |||||| ||||||||||||| |||| ||||||| |||| ||||| | ||| || ||||||| |||||||||||||| |||||||||||||||| |
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|
| T |
4646356 |
attggcatttgtgttcgcgactcggaaggtatttttgttatggccaagactattacatatccttgtactgtttcggtggatgtgggagaagctttagggc |
4646257 |
T |
|
| Q |
583 |
tgcactctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtgacagattctaaagtaacagttgatgccttcctttctacacggaa |
682 |
Q |
| |
|
|||||||||||||||||||| || ||||||||| | | ||||| | ||||||| ||| | |||||| ||||||||||||| ||||||||||| |||| |
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|
| T |
4646256 |
tgcactctgctttgcaatggctgagtgatatgctgattgataacatcgactttgcaacatactctaaattaacagttgatgcattcctttctaccaggaa |
4646157 |
T |
|
| Q |
683 |
cgacctgtctgaatttggttctattatttcttcttgtcgttctttgtatcataatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
|||| ||||||||||||||| ||||||| ||| ||||||||||||| || ||||||||||| ||||||||| |||||||||||| |
|
|
| T |
4646156 |
cgacttgtctgaatttggttgcattattttttcctgtcgttctttgtttcgcaatttattttctaactctaggatggagtttgtta |
4646071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 553 - 768
Target Start/End: Complemental strand, 24226541 - 24226326
Alignment:
| Q |
553 |
tttcggtggatgttggagaagctttagggctgcactctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtgacagattctaaagt |
652 |
Q |
| |
|
|||| |||||||| ||||||||||| |||||||||||||| |||||||||||| |||||||| |||| ||||||||| | |||| |||||||||||| | |
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|
| T |
24226541 |
tttctgtggatgtgggagaagctttggggctgcactctgcattgcaatggttgagtgatatgtagcttgataatgtgaattttgaaacagattctaaatt |
24226442 |
T |
|
| Q |
653 |
aacagttgatgccttcctttctacacggaacgacctgtctgaatttggttctattatttcttcttgtcgttctttgtatcataatttattttccaactct |
752 |
Q |
| |
|
||| |||||||||||| |||||| |||||||| |||||||||||| | |||||| ||||| ||||||||||||| ||| ||||||||||| | |||| |
|
|
| T |
24226441 |
aaccgttgatgccttctcttctaccaggaacgacttgtctgaatttgatggtattatctcttcctgtcgttctttgtttcagaatttattttctagctct |
24226342 |
T |
|
| Q |
753 |
agggtggagtttgtta |
768 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
24226341 |
agggtggagtttgtta |
24226326 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 483 - 768
Target Start/End: Original strand, 32479951 - 32480236
Alignment:
| Q |
483 |
attggtatttgtattcgcgactcggagggtagttttgttctggctaagaccaatacttacccttgtatggtttcggtggatgttggagaagctttagggc |
582 |
Q |
| |
|
||||| |||||| ||||||| | || |||| ||||||||||||||||| | || |||||||||| ||| | |||||||| || ||||||||||||| |
|
|
| T |
32479951 |
attggcatttgtgttcgcgatgcagaaggtacgtttgttctggctaagactatgacatacccttgtactgttccagtggatgtgggtgaagctttagggc |
32480050 |
T |
|
| Q |
583 |
tgcactctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtgacagattctaaagtaacagttgatgccttcctttctacacggaa |
682 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| | || ||||| || || | ||||| ||||| | |||| ||| |||||||||||| | | || |
|
|
| T |
32480051 |
tgcactctgctttgcaatggttgagtgatatgcagtttgacaatgtagatttcgaaacagactctaagttgacagctgaagccttcctttctgccagaaa |
32480150 |
T |
|
| Q |
683 |
cgacctgtctgaatttggttctattatttcttcttgtcgttctttgtatca-taatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
|||| |||| ||||||| | |||||||| || ||||||||||||| ||| || ||| ||||| |||||||||||||||||||||| |
|
|
| T |
32480151 |
cgacttgtccaaatttggatgcattatttcctcctgtcgttctttgt-tcagtactttcttttctaactctagggtggagtttgtta |
32480236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 519 - 768
Target Start/End: Original strand, 26016300 - 26016549
Alignment:
| Q |
519 |
gttctggctaagaccaatacttacccttgtatggtttcggtggatgttggagaagctttagggctgcactctgctttgcaatggttgggtgatatgcagc |
618 |
Q |
| |
|
|||||||||||| || | |||| | |||||| ||| |||||||||| || |||||| ||||| ||||||| | | ||||||||| ||||||||||| |
|
|
| T |
26016300 |
gttctggctaaggccttttcttatctttgtatagttccggtggatgtgggcgaagctctagggttgcactcgtccctacaatggttgagtgatatgcagt |
26016399 |
T |
|
| Q |
619 |
tcgataatgtggactttgtgacagattctaaagtaacagttgatgccttcctttctacacggaacgacctgtctgaatttggttctattatttcttcttg |
718 |
Q |
| |
|
| || || ||||| |||| | | | || ||||| || | ||||||||| ||| ||| |||||||| |||| ||||||| | ||||||||| || || |
|
|
| T |
26016400 |
ttgacaacgtggattttgacataaactcaaaagtgaccgctgatgccttgcttgctagcaggaacgacttgtccaaatttggctgtattatttcatcctg |
26016499 |
T |
|
| Q |
719 |
tcgttctttgtatca-taatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
|||||| |||| ||| |||||||||||| |||||||||||||||||||||| |
|
|
| T |
26016500 |
tcgttcattgt-tcagtaatttattttctaactctagggtggagtttgtta |
26016549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 556 - 768
Target Start/End: Complemental strand, 3205462 - 3205250
Alignment:
| Q |
556 |
cggtggatgttggagaagctttagggctgcactctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtgacagattctaaagtaac |
655 |
Q |
| |
|
|||||||||| || ||||| |||||| |||| |||| | | ||||||||| |||| |||||| | ||||||||||| |||| ||||| || || | || |
|
|
| T |
3205462 |
cggtggatgtaggtgaagccttagggttgcattctgttgtacaatggttgagtgacatgcagtttgataatgtggattttgaaacagactcaaagttgac |
3205363 |
T |
|
| Q |
656 |
agttgatgccttcctttctacacggaacgacctgtctgaatttggttctattatttcttcttgtcgttctttgtatca-taatttattttccaactctag |
754 |
Q |
| |
|
|| |||||| ||||| |||| |||||||| |||| ||||||| || ||| |||||||||||||||| |||| ||| |||||| ||||| |||| || |
|
|
| T |
3205362 |
agctgatgctttcctctctagcaggaacgacttgtccgaatttgtttgtatcatttcttcttgtcgtttgttgt-tcagtaatttcttttctaactttat |
3205264 |
T |
|
| Q |
755 |
ggtggagtttgtta |
768 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
3205263 |
ggtggagtttgtta |
3205250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 556 - 711
Target Start/End: Original strand, 3896274 - 3896429
Alignment:
| Q |
556 |
cggtggatgttggagaagctttagggctgcactctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtgacagattctaaagtaac |
655 |
Q |
| |
|
||||||| || || ||||| |||||| |||| ||||| ||||||||||| ||||||||||| | || ||||| || |||| ||||| || || | || |
|
|
| T |
3896274 |
cggtggaggtgggtgaagccttagggttgcatgctgctctgcaatggttgagtgatatgcagtttgacaatgtagattttgaaacagactcgaagttgac |
3896373 |
T |
|
| Q |
656 |
agttgatgccttcctttctacacggaacgacctgtctgaatttggttctattattt |
711 |
Q |
| |
|
|| |||||| |||||||||| |||||||| |||| |||||||||| |||||||| |
|
|
| T |
3896374 |
agctgatgcattcctttctagcaggaacgacttgtccgaatttggttgtattattt |
3896429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 657 - 724
Target Start/End: Original strand, 27458048 - 27458115
Alignment:
| Q |
657 |
gttgatgccttcctttctacacggaacgacctgtctgaatttggttctattatttcttcttgtcgttc |
724 |
Q |
| |
|
||||||||||| | ||||| ||||||||| | ||||||||||||||||||||| ||||||||||| |
|
|
| T |
27458048 |
gttgatgcctttcggtctactcggaacgacgactatgaatttggttctattatttcatcttgtcgttc |
27458115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 737 - 768
Target Start/End: Complemental strand, 47081802 - 47081771
Alignment:
| Q |
737 |
tttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
47081802 |
tttattttccaactctagggtggagtttgtta |
47081771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 240; Significance: 1e-132; HSPs: 14)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 477 - 768
Target Start/End: Original strand, 31808892 - 31809183
Alignment:
| Q |
477 |
acaggcattggtatttgtattcgcgactcggagggtagttttgttctggctaagaccaatacttacccttgtatggtttcggtggatgttggagaagctt |
576 |
Q |
| |
|
|||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||| |
|
|
| T |
31808892 |
acaggcattggtatttgtattcgcgactcgaaaggtagttttgttctggctaagactaatacttacccttgtattgtttcagtggatgttggagaagctt |
31808991 |
T |
|
| Q |
577 |
tagggctgcactctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtgacagattctaaagtaacagttgatgccttcctttctac |
676 |
Q |
| |
|
|||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||| ||||||| |
|
|
| T |
31808992 |
tagggctgcactctactttgcaatggttgagtgatatgcagctcgataatgtggactttgtgacagtttctaaagtaacaattgatgtcttcttttctac |
31809091 |
T |
|
| Q |
677 |
acggaacgacctgtctgaatttggttctattatttcttcttgtcgttctttgtatcataatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |
|
|
| T |
31809092 |
acggaacgacctgtctgaatttggttctattatttcttcttgtcgttctttgtttcgtaatttattttccaactctagggtggagtttgtta |
31809183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 477 - 768
Target Start/End: Original strand, 8565744 - 8566035
Alignment:
| Q |
477 |
acaggcattggtatttgtattcgcgactcggagggtagttttgttctggctaagaccaatacttacccttgtatggtttcggtggatgttggagaagctt |
576 |
Q |
| |
|
||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
8565744 |
acaggtattggtatttgtattcgcgactcagagggtggttttgttctggctaagaccaatacttacccttgtatagtctcggtggatgttggagaagcgc |
8565843 |
T |
|
| Q |
577 |
tagggctgcactctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtgacagattctaaagtaacagttgatgccttcctttctac |
676 |
Q |
| |
|
||||| ||||||||||| |||| |||||||||| |||||| | |||||||||||||||||| | ||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
8565844 |
tagggttgcactctgctatgcagtggttgggtgcaatgcagtttgataatgtggactttgtgtctgattccaaagtaacagttgatgccttcctctctac |
8565943 |
T |
|
| Q |
677 |
acggaacgacctgtctgaatttggttctattatttcttcttgtcgttctttgtatcataatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |
|
|
| T |
8565944 |
acggaacgacctatctgaatttggttctattatttcttcttgtcgttctttgtaccgtaatttattttccaactctagggtggagtttgtta |
8566035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 473 - 768
Target Start/End: Original strand, 31934966 - 31935261
Alignment:
| Q |
473 |
tcgtacaggcattggtatttgtattcgcgactcggagggtagttttgttctggctaagaccaatacttacccttgtatggtttcggtggatgttggagaa |
572 |
Q |
| |
|
|||||| || ||||| |||||| ||||||| ||||| ||||||||||||||||||||| | | || || |||||||| ||||||||||||||||||||| |
|
|
| T |
31934966 |
tcgtacgggtattggcatttgtgttcgcgattcggaaggtagttttgttctggctaagtctatcacatatccttgtattgtttcggtggatgttggagaa |
31935065 |
T |
|
| Q |
573 |
gctttagggctgcactctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtgacagattctaaagtaacagttgatgccttccttt |
672 |
Q |
| |
|
|||||||||||||||||||||||||||||| || ||||||||||| | |||||||||||||| | ||||| |||||| |||||||||||||||||||| |
|
|
| T |
31935066 |
gctttagggctgcactctgctttgcaatggatgagtgatatgcagtttgataatgtggacttcgaaacagactctaaattaacagttgatgccttccttg |
31935165 |
T |
|
| Q |
673 |
ctacacggaacgacctgtctgaatttggttctattatttcttcttgtcgttctttgtatcataatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
|||||||||||||| ||||||||||||| |||||||| |||||||||||||||||| || |||||||||||| |||||||||||||||||||||| |
|
|
| T |
31935166 |
ctacacggaacgacttgtctgaatttggctctattatgacttcttgtcgttctttgtttcgtaatttattttctaactctagggtggagtttgtta |
31935261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 483 - 768
Target Start/End: Complemental strand, 31661377 - 31661092
Alignment:
| Q |
483 |
attggtatttgtattcgcgactcggagggtagttttgttctggctaagaccaatacttacccttgtatggtttcggtggatgttggagaagctttagggc |
582 |
Q |
| |
|
||||| |||||| ||||||| ||||| | ||||||||||||||||||| | | || || |||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
31661377 |
attggcatttgtgttcgcgattcggaagatagttttgttctggctaagtctatcacatatccttgtattgtttcggtggatgttggagaagctttagggc |
31661278 |
T |
|
| Q |
583 |
tgcactctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtgacagattctaaagtaacagttgatgccttcctttctacacggaa |
682 |
Q |
| |
|
|||||||||||||||||||| || ||||||||||| | |||||||||||||| | ||||| |||||| |||||||||||||||||||| ||||| |||| |
|
|
| T |
31661277 |
tgcactctgctttgcaatggatgagtgatatgcagtttgataatgtggacttcgaaacagactctaaattaacagttgatgccttccttgctacatggaa |
31661178 |
T |
|
| Q |
683 |
cgacctgtctgaatttggttctattatttcttcttgtcgttctttgtatcataatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
||| ||||||||||||| |||||||| |||||||||||||||||| || |||||||||||| |||||||||||||||||||||| |
|
|
| T |
31661177 |
cgagttgtctgaatttggctctattatgacttcttgtcgttctttgtttcgtaatttattttctaactctagggtggagtttgtta |
31661092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 150; E-Value: 7e-79
Query Start/End: Original strand, 483 - 768
Target Start/End: Original strand, 31973234 - 31973519
Alignment:
| Q |
483 |
attggtatttgtattcgcgactcggagggtagttttgttctggctaagaccaatacttacccttgtatggtttcggtggatgttggagaagctttagggc |
582 |
Q |
| |
|
||||| |||||| ||||||| || || ||| ||||||||||||||||| | | ||| || | |||||| |||| |||||||||||||||| |||||||| |
|
|
| T |
31973234 |
attggcatttgtgttcgcgattcagaaggtggttttgttctggctaagtctattacatatcattgtattgtttgagtggatgttggagaagttttagggc |
31973333 |
T |
|
| Q |
583 |
tgcactctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtgacagattctaaagtaacagttgatgccttcctttctacacggaa |
682 |
Q |
| |
|
|||||||||||||||||||| || ||||||||||| | |||||||||||||| | ||||| |||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
31973334 |
tgcactctgctttgcaatggatgagtgatatgcagtttgataatgtggacttcgaaacagactctaaattaacagttgatgccttccttgctacacggaa |
31973433 |
T |
|
| Q |
683 |
cgacctgtctgaatttggttctattatttcttcttgtcgttctttgtatcataatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
|||| ||||||||||||| |||||||| |||||||||||||||||| || |||||||||||| ||||||| |||||||||||||| |
|
|
| T |
31973434 |
cgacttgtctgaatttggctctattatgacttcttgtcgttctttgtttcgtaatttattttctaactctatggtggagtttgtta |
31973519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 474 - 768
Target Start/End: Original strand, 17789879 - 17790173
Alignment:
| Q |
474 |
cgtacaggcattggtatttgtattcgcgactcggagggtagttttgttctggctaagaccaatacttacccttgtatggtttcggtggatgttggagaag |
573 |
Q |
| |
|
|||||||| |||| ||||||| ||||||| || |||| ||||||||||||||||| | || || ||||||| ||| ||||||| || || |||| |
|
|
| T |
17789879 |
cgtacaggtattgttatttgtgttcgcgatgtagaaggtacgtttgttctggctaagactatgacatatccttgtactgttccggtggaagtgggtgaag |
17789978 |
T |
|
| Q |
574 |
ctttagggctgcactctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtgacagattctaaagtaacagttgatgccttcctttc |
673 |
Q |
| |
|
||||||||||||| |||||||||||||||||| ||||||||||| | || |||||||| || | ||||| ||||| | |||| ||| ||||||||||| |
|
|
| T |
17789979 |
ctttagggctgcagtctgctttgcaatggttgagtgatatgcagtttgacaatgtggatttcgaaacagactctaagttgacagctgaagccttcctttc |
17790078 |
T |
|
| Q |
674 |
tacacggaacgacctgtctgaatttggttctattatttcttcttgtcgttctttgtatca-taatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
||| | |||||| | ||||||||||| | |||||||| || ||||||||||||| ||| || ||| ||||| |||||||||||||||||||||| |
|
|
| T |
17790079 |
tactagaaacgacttatctgaatttggatgcattatttcctcctgtcgttctttgt-tcagtactttcttttctaactctagggtggagtttgtta |
17790173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 474 - 768
Target Start/End: Original strand, 19098321 - 19098615
Alignment:
| Q |
474 |
cgtacaggcattggtatttgtattcgcgactcggagggtagttttgttctggctaagaccaatacttacccttgtatggtttcggtggatgttggagaag |
573 |
Q |
| |
|
|||||||| |||| ||||||| ||||||| || |||| ||||||||||||||||| | || || ||||||| ||| ||||||| || || |||| |
|
|
| T |
19098321 |
cgtacaggtattgttatttgtgttcgcgatgtagaaggtacgtttgttctggctaagactatgacatatccttgtactgttccggtggaagtgggtgaag |
19098420 |
T |
|
| Q |
574 |
ctttagggctgcactctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtgacagattctaaagtaacagttgatgccttcctttc |
673 |
Q |
| |
|
||||||||||||| |||||||||||||||||| ||||||||||| | || |||||||| || | ||||| ||||| | |||| ||| ||||||||||| |
|
|
| T |
19098421 |
ctttagggctgcagtctgctttgcaatggttgagtgatatgcagtttgacaatgtggatttcgaaacagactctaagttgacagctgaagccttcctttc |
19098520 |
T |
|
| Q |
674 |
tacacggaacgacctgtctgaatttggttctattatttcttcttgtcgttctttgtatca-taatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
||| | |||||| | ||||||||||| | |||||||| || ||||||||||||| ||| || ||| ||||| |||||||||||||||||||||| |
|
|
| T |
19098521 |
tactagaaacgacttatctgaatttggatgcattatttcctcctgtcgttctttgt-tcagtactttcttttctaactctagggtggagtttgtta |
19098615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 476 - 768
Target Start/End: Complemental strand, 6006446 - 6006154
Alignment:
| Q |
476 |
tacaggcattggtatttgtattcgcgactcggagggtagttttgttctggctaagaccaatacttacccttgtatggtttcggtggatgttggagaagct |
575 |
Q |
| |
|
|||||| |||||||||||| ||||||| | || |||| ||||||||||||||||| | || |||||||||| ||| ||||||| || || ||||| |
|
|
| T |
6006446 |
tacaggtattggtatttgtgttcgcgatgcagaaggtacgtttgttctggctaagactatgacatacccttgtactgttccggtggaagtgggtgaagca |
6006347 |
T |
|
| Q |
576 |
ttagggctgcactctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtgacagattctaaagtaacagttgatgccttcctttcta |
675 |
Q |
| |
|
||||| |||||||||||||||||||||||| |||||||||| | || |||||||| || | ||||| ||||| | |||| ||| ||||||||||||| |
|
|
| T |
6006346 |
ttaggactgcactctgctttgcaatggttgagtgatatgcaatttgacaatgtggatttcgaaacagactctaagttgacagctgaagccttcctttcta |
6006247 |
T |
|
| Q |
676 |
cacggaacgacctgtctgaatttggttctattatttcttcttgtcgttctttgtatca-taatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
| | |||||| |||| ||| |||| | |||||||| || ||||||||||||| ||| || ||| ||||| |||||||||||||||||||||| |
|
|
| T |
6006246 |
ctagaaacgacttgtccgaacttggatgcattatttcctcatgtcgttctttgt-tcagtactttcttttctaactctagggtggagtttgtta |
6006154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 540 - 768
Target Start/End: Original strand, 53437329 - 53437557
Alignment:
| Q |
540 |
tacccttgtatggtttcggtggatgttggagaagctttagggctgcactctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtga |
639 |
Q |
| |
|
|||||||||| |||||||||| |||| || ||||| |||||||||||||| ||| ||||||||||| |||||||| || | || ||||||| |||| | |
|
|
| T |
53437329 |
tacccttgtacggtttcggtgaatgtgggtgaagccttagggctgcactccgctatgcaatggttgagtgatatgtagtttgacgatgtggattttgaaa |
53437428 |
T |
|
| Q |
640 |
cagattctaaagtaacagttgatgccttcctttctacacggaacgacctgtctgaatttggttctattatttcttcttgtcgttctttgtatca-taatt |
738 |
Q |
| |
|
|||| || ||| |||||||||||||||||||||||| |||||||| |||| |||||||||| |||||||| ||||| ||||| |||| ||| | || |
|
|
| T |
53437429 |
cagactcaaaattaacagttgatgccttcctttctagcaggaacgacttgtccgaatttggttgcattatttcctcttgccgttcgttgt-tcagcactt |
53437527 |
T |
|
| Q |
739 |
tattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
| ||||| |||||||||||||||||||||| |
|
|
| T |
53437528 |
tcttttctaactctagggtggagtttgtta |
53437557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 474 - 768
Target Start/End: Original strand, 31227965 - 31228259
Alignment:
| Q |
474 |
cgtacaggcattggtatttgtattcgcgactcggagggtagttttgttctggctaagaccaatacttacccttgtatggtttcggtggatgttggagaag |
573 |
Q |
| |
|
|||||||| |||||||| ||| ||||||| | || |||| ||||||||||||||||| | || |||||||||| || ||||||| || || |||| |
|
|
| T |
31227965 |
cgtacaggtattggtatctgtgttcgcgatgcagaaggtacgtttgttctggctaagactatgacatacccttgtacttttccggtggaagtgggtgaag |
31228064 |
T |
|
| Q |
574 |
ctttagggctgcactctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtgacagattctaaagtaacagttgatgccttcctttc |
673 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||| | || |||||||| || | ||||| ||||| | ||| ||| ||||||||||| |
|
|
| T |
31228065 |
ctttagggctgcactctgctttgcaatggttgagtgatatgcagtttgacaatgtggatttcgaaacagactctaagttgacaactgaagccttcctttc |
31228164 |
T |
|
| Q |
674 |
tacacggaacgacctgtctgaatttggttctattatttcttcttgtcgttctttgtatca-taatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
||| | |||||| |||| |||||||| | |||||||| || |||||||||| | ||| || ||| ||||| |||||||||||||||||||||| |
|
|
| T |
31228165 |
tactagaaacgacttgtccgaatttggatgcattatttcctcccgtcgttctttat-tcagtactttcttttctaactctagggtggagtttgtta |
31228259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 656 - 764
Target Start/End: Original strand, 53394744 - 53394852
Alignment:
| Q |
656 |
agttgatgccttcctttctacacggaacgacctgtctgaatttggttctattatttcttcttgtcgttctttgtatca-taatttattttccaactctag |
754 |
Q |
| |
|
|||||||||||||||||||| |||| ||| |||| |||||||||| |||||||| ||||||||||| |||| ||| | ||| ||||| |||||||| |
|
|
| T |
53394744 |
agttgatgccttcctttctagcaggaatgacttgtccgaatttggttgcattatttcctcttgtcgttcgttgt-tcagcagtttcttttctaactctag |
53394842 |
T |
|
| Q |
755 |
ggtggagttt |
764 |
Q |
| |
|
|||||||||| |
|
|
| T |
53394843 |
ggtggagttt |
53394852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 705 - 768
Target Start/End: Complemental strand, 16739612 - 16739549
Alignment:
| Q |
705 |
attatttcttcttgtcgttctttgtatca-taatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
|||||||||||||||||||| |||| ||| || |||||||||||||||| ||||||||||||||| |
|
|
| T |
16739612 |
attatttcttcttgtcgttcgttgt-tcactactttattttccaactctcgggtggagtttgtta |
16739549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 692 - 768
Target Start/End: Complemental strand, 38015257 - 38015181
Alignment:
| Q |
692 |
tgaatttggttctattatttcttcttgtcgttctttgtatcataatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
||||||||||| |||||| ||| |||||||||||||| | | ||||||||| ||||||| |||||||||||||| |
|
|
| T |
38015257 |
tgaatttggttgcattattacttattgtcgttctttgtttaactctttattttctaactctatggtggagtttgtta |
38015181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 734 - 768
Target Start/End: Complemental strand, 19603072 - 19603038
Alignment:
| Q |
734 |
taatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||| |
|
|
| T |
19603072 |
taatttattttctaactctagggtggagtttgtta |
19603038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0252 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: scaffold0252
Description:
Target: scaffold0252; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 477 - 753
Target Start/End: Original strand, 7649 - 7925
Alignment:
| Q |
477 |
acaggcattggtatttgtattcgcgactcggagggtagttttgttctggctaagaccaatacttacccttgtatggtttcggtggatgttggagaagctt |
576 |
Q |
| |
|
||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||| ||| ||||||| ||||||||||||||||||||||||| |
|
|
| T |
7649 |
acaggtattggcatttgtattcgcgactcggaaggtagttttgttctggctaagactaatacatactcttgtattgtttcggtggatgttggagaagctt |
7748 |
T |
|
| Q |
577 |
tagggctgcactctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtgacagattctaaagtaacagttgatgccttcctttctac |
676 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
7749 |
tagggctgcactctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtaacagattctaaagtaatagttgctgccttcctttctac |
7848 |
T |
|
| Q |
677 |
acggaacgacctgtctgaatttggttctattatttcttcttgtcgttctttgtatcataatttattttccaactcta |
753 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
7849 |
acggaacgacctgtctgaatttggttctattatttcttcttgtcgttctttgtttcgtaatttattttccaactcta |
7925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 224; Significance: 1e-123; HSPs: 10)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 477 - 768
Target Start/End: Original strand, 4518084 - 4518375
Alignment:
| Q |
477 |
acaggcattggtatttgtattcgcgactcggagggtagttttgttctggctaagaccaatacttacccttgtatggtttcggtggatgttggagaagctt |
576 |
Q |
| |
|
||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| | |
|
|
| T |
4518084 |
acaggtattggtatttgtattcgcgactgggagggtagttttgttctggctaagaccggtacttacccttgtctggtttcggtggatgttggagaagcgt |
4518183 |
T |
|
| Q |
577 |
tagggctgcactctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtgacagattctaaagtaacagttgatgccttcctttctac |
676 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
4518184 |
tagggttgcactctgctttgcaatggttgggtgatatgcagcttgataatgtggattttgtgacagattccaaagtcacagttgatgccttcctttctac |
4518283 |
T |
|
| Q |
677 |
acggaacgacctgtctgaatttggttctattatttcttcttgtcgttctttgtatcataatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
||| |||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| | ||||||||||||||||| |
|
|
| T |
4518284 |
acgaaacgacctatctgaatttggttctattatttcttcttgtcgttctttttatcgtaatttattttccaattatagggtggagtttgtta |
4518375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 477 - 768
Target Start/End: Original strand, 35284764 - 35285055
Alignment:
| Q |
477 |
acaggcattggtatttgtattcgcgactcggagggtagttttgttctggctaagaccaatacttacccttgtatggtttcggtggatgttggagaagctt |
576 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||| || | ||||||||||||||||| |
|
|
| T |
35284764 |
acaggtattggtatttgtattcgcgactcggagggtggttttgttctggctaagaccaattcttactcttgtatagtccccgtggatgttggagaagcac |
35284863 |
T |
|
| Q |
577 |
tagggctgcactctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtgacagattctaaagtaacagttgatgccttcctttctac |
676 |
Q |
| |
|
|||| || ||||||||||||| ||| |||||||||||||||| ||||||||||| |||||| | ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
35284864 |
taggtttgtactctgctttgcagtgggtgggtgatatgcagcttgataatgtggattttgtgtctgattctaaagtaacagtcgatgccttcctttctac |
35284963 |
T |
|
| Q |
677 |
acggaacgacctgtctgaatttggttctattatttcttcttgtcgttctttgtatcataatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
|||||||||||| ||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |
|
|
| T |
35284964 |
acggaacgacctttctgaatttggttatattatttcttcttgtcgttctttgtaccgtaatttattttccaactctagggtggagtttgtta |
35285055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 489 - 768
Target Start/End: Original strand, 27978488 - 27978766
Alignment:
| Q |
489 |
atttgtattcgcgactcggagggtagttttgttctggctaagaccaatacttacccttgtatggtttcggtggatgttggagaagctttagggctgcact |
588 |
Q |
| |
|
|||||| ||||||||||||| | | ||||||| ||||||||||| | ||| || ||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27978488 |
atttgtgttcgcgactcggaag-tggttttgtactggctaagactattacatatccttgtactgtttcggtggatgttggagaagctttagggctgcact |
27978586 |
T |
|
| Q |
589 |
ctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtgacagattctaaagtaacagttgatgccttcctttctacacggaacgacct |
688 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||| |||||||||| ||| |||||||| |||||||||||||||||||||||| | |||| ||| | |
|
|
| T |
27978587 |
ctgctttgcaatggttgagtgatatgcagcttgataacgtggactttgaaacatattctaaattaacagttgatgccttcctttctaaaaggaatgactt |
27978686 |
T |
|
| Q |
689 |
gtctgaatttggttctattatttcttcttgtcgttctttgtatcataatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
|||||||||||| |||||||||||| ||||||||||||| || ||||||||||| ||||||| |||||||||||||| |
|
|
| T |
27978687 |
gtctgaatttggccgtattatttcttcctgtcgttctttgtttcgcaatttattttctaactctatggtggagtttgtta |
27978766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 489 - 768
Target Start/End: Original strand, 28035757 - 28036035
Alignment:
| Q |
489 |
atttgtattcgcgactcggagggtagttttgttctggctaagaccaatacttacccttgtatggtttcggtggatgttggagaagctttagggctgcact |
588 |
Q |
| |
|
|||||| ||||||||||||| | | ||||||| ||||||||||| | ||| || ||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28035757 |
atttgtgttcgcgactcggaag-tggttttgtactggctaagactattacatatccttgtactgtttcggtggatgttggagaagctttagggctgcact |
28035855 |
T |
|
| Q |
589 |
ctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtgacagattctaaagtaacagttgatgccttcctttctacacggaacgacct |
688 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||| |||||||||| ||| |||||||| |||||||||||||||||||||||| | |||| ||| | |
|
|
| T |
28035856 |
ctgctttgcaatggttgagtgatatgcagcttgataacgtggactttgaaacatattctaaattaacagttgatgccttcctttctaaaaggaatgactt |
28035955 |
T |
|
| Q |
689 |
gtctgaatttggttctattatttcttcttgtcgttctttgtatcataatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
|||||||||||| |||||||||||| ||||||||||||| || ||||||||||| ||||||| |||||||||||||| |
|
|
| T |
28035956 |
gtctgaatttggccgtattatttcttcctgtcgttctttgtttcgcaatttattttctaactctatggtggagtttgtta |
28036035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 504 - 768
Target Start/End: Complemental strand, 34724236 - 34723972
Alignment:
| Q |
504 |
tcggagggtagttttgttctggctaagaccaatacttacccttgtatggtttcggtggatgttggagaagctttagggctgcactctgctttgcaatggt |
603 |
Q |
| |
|
||||| |||||||||||||||| |||| | |||||| |||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
34724236 |
tcggaaggtagttttgttctggttaagtctgttacttatccttgtgttgtttcggtggatgttggagaagctttagggctacactctgctttgcaatgga |
34724137 |
T |
|
| Q |
604 |
tgggtgatatgcagctcgataatgtggactttgtgacagattctaaagtaacagttgatgccttcctttctacacggaacgacctgtctgaatttggttc |
703 |
Q |
| |
|
|| | |||||||| | |||||||||||||| | ||||| || ||||| |||||||||||||||||| |||||||||||||| ||||||||||||| || |
|
|
| T |
34724136 |
tgagcgatatgcaatttgataatgtggacttcgaaacagactcaaaagtcacagttgatgccttccttgctacacggaacgacttgtctgaatttggctc |
34724037 |
T |
|
| Q |
704 |
tattatttcttcttgtcgttctttgtatcataatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
||||||| |||| ||||||||||||| || |||||||||||| ||||| |||||||||||||||| |
|
|
| T |
34724036 |
tattattacttcctgtcgttctttgtttcgtaatttattttctaactccagggtggagtttgtta |
34723972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 474 - 768
Target Start/End: Complemental strand, 15990823 - 15990529
Alignment:
| Q |
474 |
cgtacaggcattggtatttgtattcgcgactcggagggtagttttgttctggctaagaccaatacttacccttgtatggtttcggtggatgttggagaag |
573 |
Q |
| |
|
|||||| | |||||||||||| ||||||| | || |||| ||||||||||||||||| | || |||||||||| ||| ||||||| || || |||| |
|
|
| T |
15990823 |
cgtacatgtattggtatttgtgttcgcgatgcagaaggtacgtttgttctggctaagactatgacatacccttgtactgttccggtggaagtgggtgaag |
15990724 |
T |
|
| Q |
574 |
ctttagggctgcactctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtgacagattctaaagtaacagttgatgccttcctttc |
673 |
Q |
| |
|
||||||||||||||| |||||||||||||||| ||||||||||| | || ||| |||| |||| ||||| ||||| | |||| ||| ||||||||||| |
|
|
| T |
15990723 |
ctttagggctgcactttgctttgcaatggttgagtgatatgcagtttgacaatttggattttgaaacagactctaagttgacagctgaagccttcctttc |
15990624 |
T |
|
| Q |
674 |
tacacggaacgacctgtctgaatttggttctattatttcttcttgtcgttctttgtatca-taatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
||| | |||||| |||| |||||||| | |||||||| || ||||||||||||| ||| || ||| ||||| |||||||||||||||||||||| |
|
|
| T |
15990623 |
tactagaaacgacttgtccgaatttggatgcattatttcctcctgtcgttctttgt-tcattactttcttttctaactctagggtggagtttgtta |
15990529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 474 - 768
Target Start/End: Original strand, 14505448 - 14505742
Alignment:
| Q |
474 |
cgtacaggcattggtatttgtattcgcgactcggagggtagttttgttctggctaagaccaatacttacccttgtatggtttcggtggatgttggagaag |
573 |
Q |
| |
|
|||||||| |||||||||||| ||||||| | || |||| ||||||||||||||||| | || |||||||||| ||| ||||||| || || |||| |
|
|
| T |
14505448 |
cgtacaggtattggtatttgtgttcgcgatgcagaaggtacgtttgttctggctaagactatgacatacccttgtactgttccggtggaagtgggtgaag |
14505547 |
T |
|
| Q |
574 |
ctttagggctgcactctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtgacagattctaaagtaacagttgatgccttcctttc |
673 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| ||||||||||| | || |||||||| || | ||||| ||||| | |||| ||| ||||||||||| |
|
|
| T |
14505548 |
ctttagggatgcactctgctttgcaatggttgagtgatatgcagtttgacaatgtggatttcgaaacagactctaagttgacagctgaagccttcctttc |
14505647 |
T |
|
| Q |
674 |
tacacggaacgacctgtctgaatttggttctattatttcttcttgtcgttctttgtatca-taatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
||| | |||||| | | |||||||| | |||||||| || ||||||||||||| ||| || ||| ||||| |||||||||||||||||||||| |
|
|
| T |
14505648 |
tactagaaacgacttataagaatttggatgcattatttcctcctgtcgttctttgt-tcagtactttcttttctaactctagggtggagtttgtta |
14505742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 552 - 768
Target Start/End: Original strand, 1186350 - 1186566
Alignment:
| Q |
552 |
gtttcggtggatgttggagaagctttagggctgcactctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtgacagattctaaag |
651 |
Q |
| |
|
|||||||||||||| || |||||||||||| ||||||||||||||||||||||| ||||||||||| | || ||| || | |||| ||||| ||||| |
|
|
| T |
1186350 |
gtttcggtggatgtgggtgaagctttaggggtgcactctgctttgcaatggttgagtgatatgcagtttgacaatatgaattttgaaacagactctaagt |
1186449 |
T |
|
| Q |
652 |
taacagttgatgccttcctttctacacggaacgacctgtctgaatttggttctattatttcttcttgtcgttctttgtatcataatttattttccaactc |
751 |
Q |
| |
|
| |||| ||| |||||||||||||| |||||||| |||| |||||||||| |||||||| || ||||||||||| | || || |||||| ||||| |
|
|
| T |
1186450 |
tgacagctgacgccttcctttctaccaggaacgacttgtccgaatttggttgcattatttcctcctgtcgttctttattctgtacttcattttctaactc |
1186549 |
T |
|
| Q |
752 |
tagggtggagtttgtta |
768 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
1186550 |
tagggtggagtttgtta |
1186566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 474 - 768
Target Start/End: Complemental strand, 37590450 - 37590156
Alignment:
| Q |
474 |
cgtacaggcattggtatttgtattcgcgactcggagggtagttttgttctggctaagaccaatacttacccttgtatggtttcggtggatgttggagaag |
573 |
Q |
| |
|
|||||||| |||||||||||| ||||||| | || || | ||||||||||||||||| | || |||||||||| ||| | |||||| | || |||| |
|
|
| T |
37590450 |
cgtacaggtattggtatttgtgttcgcgatgcagaaggcacgtttgttctggctaagactatgacatacccttgtactgttccagtggatatgggtgaag |
37590351 |
T |
|
| Q |
574 |
ctttagggctgcactctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtgacagattctaaagtaacagttgatgccttcctttc |
673 |
Q |
| |
|
||||||||||||||| |||||||||||||||| |||||||||| | || |||||||| || | ||||| | ||| |||| | ||| ||||||||||| |
|
|
| T |
37590350 |
ctttagggctgcactatgctttgcaatggttgagtgatatgcaatttgacaatgtggatttcgaaacagactttaagttaacggctgaagccttcctttc |
37590251 |
T |
|
| Q |
674 |
tacacggaacgacctgtctgaatttggttctattatttcttcttgtcgttctttgtatca-taatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
||| | |||||| |||| ||||||| | ||| |||| || |||||||||||| ||| || ||| ||||| |||||||||||||||||||||| |
|
|
| T |
37590250 |
tactagaaacgacttgtccaaatttggatgcattgtttcctcccgtcgttctttgt-tcagtattttcttttctaactctagggtggagtttgtta |
37590156 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 679 - 768
Target Start/End: Complemental strand, 14657914 - 14657825
Alignment:
| Q |
679 |
ggaacgacctgtctgaatttggttctattatttcttcttgtcgttctttgtatcataatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
|||||||| ||| |||||||||| |||||||||||||||| || ||||| | | ||||| |||| |||||||||||||||||||||| |
|
|
| T |
14657914 |
ggaacgacacgtccgaatttggttgcattatttcttcttgtcattatttgtttacttatttagtttctaactctagggtggagtttgtta |
14657825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 222; Significance: 1e-122; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 483 - 768
Target Start/End: Original strand, 9958963 - 9959248
Alignment:
| Q |
483 |
attggtatttgtattcgcgactcggagggtagttttgttctggctaagaccaatacttacccttgtatggtttcggtggatgttggagaagctttagggc |
582 |
Q |
| |
|
||||| |||||||||||||||||| | ||||||||||||||||||||||| ||| | ||||| ||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
9958963 |
attggcatttgtattcgcgactcgaaaggtagttttgttctggctaagactaatgcatacccatgtattgtttcggtggatgttggagaagctttagggc |
9959062 |
T |
|
| Q |
583 |
tgcactctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtgacagattctaaagtaacagttgatgccttcctttctacacggaa |
682 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9959063 |
tgcactctgctttgcaatggttgggtgatatgcagcttgataatgtggactttgaaacagattctaaagtaacagttgatgccttcctttctacacggaa |
9959162 |
T |
|
| Q |
683 |
cgacctgtctgaatttggttctattatttcttcttgtcgttctttgtatcataatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||| |||||||||||||||||||||| |
|
|
| T |
9959163 |
cgacctgtctgaatttggttctattatttcttcttgtcgttctttgttccgtaatttatattctaactctagggtggagtttgtta |
9959248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 477 - 768
Target Start/End: Original strand, 31028858 - 31029149
Alignment:
| Q |
477 |
acaggcattggtatttgtattcgcgactcggagggtagttttgttctggctaagaccaatacttacccttgtatggtttcggtggatgttggagaagctt |
576 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||| || | ||||||||||||||||| |
|
|
| T |
31028858 |
acaggtattggtatttgtattcgcgactcggagggtggttttgttctggctaagaccaattcttactcttgtatagtccccgtggatgttggagaagcac |
31028957 |
T |
|
| Q |
577 |
tagggctgcactctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtgacagattctaaagtaacagttgatgccttcctttctac |
676 |
Q |
| |
|
|||| || ||||||||||||| ||| |||||||||||||||| ||||||||||| |||||| | ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
31028958 |
taggtttgtactctgctttgcagtgggtgggtgatatgcagcttgataatgtggattttgtgtctgattctaaagtaacagtcgatgccttcctttctac |
31029057 |
T |
|
| Q |
677 |
acggaacgacctgtctgaatttggttctattatttcttcttgtcgttctttgtatcataatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |
|
|
| T |
31029058 |
acggaacgacctttctgaatttggttctattatttcttcttgtcgttctttgtaccgtaatttattttccaactctagggtggagtttgtta |
31029149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 485 - 616
Target Start/End: Original strand, 16887043 - 16887174
Alignment:
| Q |
485 |
tggtatttgtattcgcgactcggagggtagttttgttctggctaagaccaatacttacccttgtatggtttcggtggatgttggagaagctttagggctg |
584 |
Q |
| |
|
|||||||||| |||| || ||||| |||| |||||| ||||||||||| | ||| || ||||| | |||||||||||||| ||||||||||||| | || |
|
|
| T |
16887043 |
tggtatttgtgttcgtgattcggaaggtacttttgtcctggctaagactattacatatccttgcactgtttcggtggatgtgggagaagctttagtgttg |
16887142 |
T |
|
| Q |
585 |
cactctgctttgcaatggttgggtgatatgca |
616 |
Q |
| |
|
||||| ||| ||||||||||| |||||||||| |
|
|
| T |
16887143 |
cactccgctctgcaatggttgagtgatatgca |
16887174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 628 - 768
Target Start/End: Original strand, 16890092 - 16890231
Alignment:
| Q |
628 |
tggactttgtgacagattctaaagtaacagttgatgccttcctttctacacggaacgacctgtctgaatttggttctattatttcttcttgtcgttcttt |
727 |
Q |
| |
|
||||||||| ||||| |||||| | ||| |||||||||||||||| | || ||||| ||||||||||||||| |||||||||||||||| || | |
|
|
| T |
16890092 |
tggactttgaaacagactctaaattgacatctgatgccttcctttcttccaggtacgacttgtctgaatttggttgcattatttcttcttgtc-tttggt |
16890190 |
T |
|
| Q |
728 |
gtatcataatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
| ||| | |||||||| |||||||||||||||||||||| |
|
|
| T |
16890191 |
atttcacactttattttataactctagggtggagtttgtta |
16890231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 693 - 768
Target Start/End: Complemental strand, 34355938 - 34355863
Alignment:
| Q |
693 |
gaatttggttctattatttcttcttgtcgttctttgtatcataatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||| | | |||||||| |||||||||||| ||||||||| |
|
|
| T |
34355938 |
gaatttggttgcattatttcttcttgtcgttctttgtttacttctttattttttaactctagggtgaagtttgtta |
34355863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 570 - 628
Target Start/End: Complemental strand, 1493505 - 1493447
Alignment:
| Q |
570 |
gaagctttagggctgcactctgctttgcaatggttgggtgatatgcagctcgataatgt |
628 |
Q |
| |
|
|||||||||||||| |||| |||| ||||||||||| ||||||||||| | |||||||| |
|
|
| T |
1493505 |
gaagctttagggctccactttgctctgcaatggttgagtgatatgcagtttgataatgt |
1493447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 543 - 617
Target Start/End: Original strand, 30588785 - 30588859
Alignment:
| Q |
543 |
ccttgtatggtttcggtggatgttggagaagctttagggctgcactctgctttgcaatggttgggtgatatgcag |
617 |
Q |
| |
|
|||||||||||||| || ||||| || ||||||||||| ||||||| ||| | |||||| || ||||||||||| |
|
|
| T |
30588785 |
ccttgtatggtttcagttgatgtgggtgaagctttaggtatgcactcggctctacaatggctgagtgatatgcag |
30588859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 735 - 768
Target Start/End: Complemental strand, 1493394 - 1493361
Alignment:
| Q |
735 |
aatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
||||||||||| |||||||||||||||||||||| |
|
|
| T |
1493394 |
aatttattttctaactctagggtggagtttgtta |
1493361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 212; Significance: 1e-116; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 489 - 768
Target Start/End: Complemental strand, 21701871 - 21701592
Alignment:
| Q |
489 |
atttgtattcgcgactcggagggtagttttgttctggctaagaccaatacttacccttgtatggtttcggtggatgttggagaagctttagggctgcact |
588 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| ||||||||||| | ||| || |||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21701871 |
atttgtattcgcgactcggaaggtagttttgtactggctaagactattacatatccttgtattgtttcggtggatgttggagaagctttagggctgcact |
21701772 |
T |
|
| Q |
589 |
ctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtgacagattctaaagtaacagttgatgccttcctttctacacggaacgacct |
688 |
Q |
| |
|
||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21701771 |
ctgctttgcaatggttgagtgatatgcagcttgataatgtggactttgaaacagattctaaagtaacagttgatgccttcctttctacacggaacgacct |
21701672 |
T |
|
| Q |
689 |
gtctgaatttggttctattatttcttcttgtcgttctttgtatcataatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
| ||||||||||||||||||||||||| |||||||| |||| || |||||||||||| |||||||||||||||||||||| |
|
|
| T |
21701671 |
gactgaatttggttctattatttcttcctgtcgttcgttgtttcgtaatttattttctaactctagggtggagtttgtta |
21701592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 540 - 768
Target Start/End: Original strand, 30033375 - 30033603
Alignment:
| Q |
540 |
tacccttgtatggtttcggtggatgttggagaagctttagggctgcactctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtga |
639 |
Q |
| |
|
|||||||||| ||| ||||||| || || |||||||||||||||||||||||||||||||||||| |||||||||| | || |||||||| || | | |
|
|
| T |
30033375 |
tacccttgtactgttccggtggaagtgggtgaagctttagggctgcactctgctttgcaatggttgagtgatatgcaatttgacaatgtggatttcgaaa |
30033474 |
T |
|
| Q |
640 |
cagattctaaagtaacagttgatgccttcctttctacacggaacgacctgtctgaatttggttctattatttcttcttgtcgttctttgtatcataattt |
739 |
Q |
| |
|
|||| ||||| | |||| ||| |||||||||||||| | |||||| |||| |||||||| | |||||||| || ||||||||||||| ||| ||| |
|
|
| T |
30033475 |
cagactctaagttgacagctgaagccttcctttctactagaaacgacttgtccgaatttggatgcattatttcctcatgtcgttctttgttcaatacttt |
30033574 |
T |
|
| Q |
740 |
attttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
||||| |||||||||||||||||||||| |
|
|
| T |
30033575 |
cttttctaactctagggtggagtttgtta |
30033603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 688 - 764
Target Start/End: Complemental strand, 24427694 - 24427618
Alignment:
| Q |
688 |
tgtctgaatttggttctattatttcttcttgtcgttctttgtatcataatttattttccaactctagggtggagttt |
764 |
Q |
| |
|
||||||||||||||| ||||||||||||||| ||||||||| | | ||||||||| ||||||||||| |||||| |
|
|
| T |
24427694 |
tgtctgaatttggtttcattatttcttcttgttgttctttgtttacttctttattttctaactctagggtcgagttt |
24427618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 705 - 768
Target Start/End: Original strand, 41117147 - 41117210
Alignment:
| Q |
705 |
attatttcttcttgtcgttctttgtatcataatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
|||||||||||||||||||| |||| | | |||||||||||||||| ||||||||||||||| |
|
|
| T |
41117147 |
attatttcttcttgtcgttcgttgtttactgctttattttccaactctcgggtggagtttgtta |
41117210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 657 - 724
Target Start/End: Original strand, 50309222 - 50309289
Alignment:
| Q |
657 |
gttgatgccttcctttctacacggaacgacctgtctgaatttggttctattatttcttcttgtcgttc |
724 |
Q |
| |
|
||||||||||| | ||||| |||||||| ||||||||||||||||||||||| ||||||||||| |
|
|
| T |
50309222 |
gttgatgcctttcggtctaccaggaacgacgactctgaatttggttctattatttcatcttgtcgttc |
50309289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 705 - 768
Target Start/End: Complemental strand, 52147891 - 52147828
Alignment:
| Q |
705 |
attatttcttcttgtcgttctttgtatcataatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
||||||||||||||| ||||||||| | | ||||||||||||||||| |||| ||||||||| |
|
|
| T |
52147891 |
attatttcttcttgttgttctttgtttactgctttattttccaactctaaggtgaagtttgtta |
52147828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 171; Significance: 2e-91; HSPs: 12)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 483 - 729
Target Start/End: Original strand, 16084807 - 16085053
Alignment:
| Q |
483 |
attggtatttgtattcgcgactcggagggtagttttgttctggctaagaccaatacttacccttgtatggtttcggtggatgttggagaagctttagggc |
582 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||||||| || ||||||| | ||| | | |||||| |||| |||||||||||||||||||||||||| |
|
|
| T |
16084807 |
attggcatttgtattcgcgactcggaaggtagttttgtattgtctaagactattacatctctttgtattgttttggtggatgttggagaagctttagggc |
16084906 |
T |
|
| Q |
583 |
tgcactctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtgacagattctaaagtaacagttgatgccttcctttctacacggaa |
682 |
Q |
| |
|
||||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
16084907 |
tgcactctgctttgcaatggttgagtgatatgcaactggataatgtggactttgaaacagattctaaagtaacagttgatgtcttcctttctacacggaa |
16085006 |
T |
|
| Q |
683 |
cgacctgtctgaatttggttctattatttcttcttgtcgttctttgt |
729 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16085007 |
cgacctgtctgaatttggttctattatttcttcttgtcgttctttgt |
16085053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 146 - 292
Target Start/End: Original strand, 33248571 - 33248718
Alignment:
| Q |
146 |
tcttactttgcattgtttgtctttatttatatgtttgtcgacatagtatacttgagtttgtttagagtacactgtaaagataaagttaagtctc-nnnnn |
244 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33248571 |
tcttactttgcattgtttgtctttatttatatgtttgtcgacatagtatacttgagtttgtttagagtacactgtaaagataaagttaagtctctttttt |
33248670 |
T |
|
| Q |
245 |
nnngactcaagataaagttaagtctaaaactagataatatggtcttat |
292 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33248671 |
ttttactcaagataaagttaagtctaaaactagataatatggtcttat |
33248718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 474 - 768
Target Start/End: Original strand, 22292106 - 22292400
Alignment:
| Q |
474 |
cgtacaggcattggtatttgtattcgcgactcggagggtagttttgttctggctaagaccaatacttacccttgtatggtttcggtggatgttggagaag |
573 |
Q |
| |
|
|||||||| |||||||||||| ||||||| | || |||| ||||||||||||||||| | || |||||||||| ||| ||||||| || || |||| |
|
|
| T |
22292106 |
cgtacaggtattggtatttgtgttcgcgatgcagaaggtacgtttgttctggctaagactatgacatacccttgtactgttccggtggaagtgggtgaag |
22292205 |
T |
|
| Q |
574 |
ctttagggctgcactctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtgacagattctaaagtaacagttgatgccttcctttc |
673 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||| | || |||||||| || | ||||| ||||| | |||| ||| ||||||||||| |
|
|
| T |
22292206 |
ctttagggctgcactctgctttgcaatggttgagtgatatgcagtttgacaatgtggatttcgaaacagactctaagttgacagctgaagccttcctttc |
22292305 |
T |
|
| Q |
674 |
tacacggaacgacctgtctgaatttggttctattatttcttcttgtcgttctttgtatca-taatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
||| | |||||| |||| |||||||| | |||||||| || ||||||||||||| ||| || ||| ||||| |||||||||||||||||||||| |
|
|
| T |
22292306 |
tactagaaacgacttgtccgaatttggatgcattatttcctcctgtcgttctttgt-tcagtactttcttttctaactctagggtggagtttgtta |
22292400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 363 - 474
Target Start/End: Original strand, 33248792 - 33248902
Alignment:
| Q |
363 |
gggtgctaatcaaagttacttcacaaataatatttagggtagagttattttgtttaataacttatttacttcatgatcaattttaataacttataagagt |
462 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||| |
|
|
| T |
33248792 |
gggtgctaatcaa-gttacttcacaaataatatttagggtagagttattttttttaataacttatttacttcatgatcaattctattaacttataagagt |
33248890 |
T |
|
| Q |
463 |
agcgttattttc |
474 |
Q |
| |
|
|||||||||||| |
|
|
| T |
33248891 |
agcgttattttc |
33248902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 516 - 768
Target Start/End: Original strand, 28246026 - 28246278
Alignment:
| Q |
516 |
tttgttctggctaagaccaatacttacccttgtatggtttcggtggatgttggagaagctttagggctgcactctgctttgcaatggttgggtgatatgc |
615 |
Q |
| |
|
||||||||||||||| | | || |||| |||||| |||||||||||||| || |||||||||||| ||||||||||||||||||||||| ||||||||| |
|
|
| T |
28246026 |
tttgttctggctaagtctatgacataccgttgtattgtttcggtggatgtgggtgaagctttagggatgcactctgctttgcaatggttgagtgatatgc |
28246125 |
T |
|
| Q |
616 |
agctcgataatgtggactttgtgacagattctaaagtaacagttgatgccttcctttctacacggaacgacctgtctgaatttggttctattatttcttc |
715 |
Q |
| |
|
|| | || |||||||| |||| ||| | ||||| | |||| | | |||||||||||||| |||||||| |||| |||||||| | |||||||| || |
|
|
| T |
28246126 |
agtttgacaatgtggattttgaaacaaactctaagttgacagctcaagccttcctttctaccaggaacgacttgtccgaatttggctgcattatttcctc |
28246225 |
T |
|
| Q |
716 |
ttgtcgttctttgtatcataatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
||| ||||||||| ||| ||| ||||| ||||||||| |||||||||||| |
|
|
| T |
28246226 |
ctgttgttctttgttcaatactttcttttctaactctaggatggagtttgtta |
28246278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 33248435 - 33248506
Alignment:
| Q |
10 |
ctgcttcctgcttctatacaattgggaatttcatacatacagctggattgattacaacatctcttctcactt |
81 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
33248435 |
ctgcttcctgcttctatacaattgggaacttcatacatacagctggattgattacaacatcccttctcactt |
33248506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 570 - 631
Target Start/End: Original strand, 21092024 - 21092085
Alignment:
| Q |
570 |
gaagctttagggctgcactctgctttgcaatggttgggtgatatgcagctcgataatgtgga |
631 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||||||| ||||||||||| | ||||||||||| |
|
|
| T |
21092024 |
gaagctttagggttgcactctgctatgcaatggttgagtgatatgcagtttgataatgtgga |
21092085 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 540 - 700
Target Start/End: Original strand, 18759509 - 18759669
Alignment:
| Q |
540 |
tacccttgtatggtttcggtggatgttggagaagctttagggctgcactctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtga |
639 |
Q |
| |
|
||||| ||||| ||||| ||||||| || |||||||||||| ||||||| ||||||||||||||| | |||||||| | || ||| |||| |||| | |
|
|
| T |
18759509 |
tacccatgtatagtttccatggatgtgggtgaagctttagggatgcactccgctttgcaatggttgagggatatgcactttgacaatatggattttgaaa |
18759608 |
T |
|
| Q |
640 |
cagattctaaagtaacagttgatgccttcctttctacacggaacgacctgtctgaatttgg |
700 |
Q |
| |
|
||||||| || | ||| |||||| ||||||||||| ||||||| |||| |||||||| |
|
|
| T |
18759609 |
cagattcaaagttgacaactgatgcattcctttctaccaggaacgatttgtccgaatttgg |
18759669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 705 - 768
Target Start/End: Complemental strand, 2157959 - 2157896
Alignment:
| Q |
705 |
attatttcttcttgtcgttctttgtatcataatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
|||||||||||||||||||| |||| | | |||||||||||||||| ||||||||||||||| |
|
|
| T |
2157959 |
attatttcttcttgtcgttcgttgttccctcctttattttccaactctcgggtggagtttgtta |
2157896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 705 - 768
Target Start/End: Complemental strand, 19741712 - 19741649
Alignment:
| Q |
705 |
attatttcttcttgtcgttctttgtatcataatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
||||||||||||||||||||||||| | | |||||||||||||||||||||| | ||||||| |
|
|
| T |
19741712 |
attatttcttcttgtcgttctttgtttacttctttattttccaactctagggtgaaatttgtta |
19741649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 690 - 764
Target Start/End: Complemental strand, 34920126 - 34920052
Alignment:
| Q |
690 |
tctgaatttggttctattatttcttcttgtcgttctttgtatcataatttattttccaactctagggtggagttt |
764 |
Q |
| |
|
||||||||||||| |||||| |||||||||||||||||| | | ||||||||| ||||||||||| |||||| |
|
|
| T |
34920126 |
tctgaatttggttgcattattacttcttgtcgttctttgtttaactctttattttctaactctagggtagagttt |
34920052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 734 - 768
Target Start/End: Original strand, 16088556 - 16088590
Alignment:
| Q |
734 |
taatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||| |
|
|
| T |
16088556 |
taatttattttctaactctagggtggagtttgtta |
16088590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 136; Significance: 2e-70; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 477 - 768
Target Start/End: Original strand, 11502052 - 11502343
Alignment:
| Q |
477 |
acaggcattggtatttgtattcgcgactcggagggtagttttgttctggctaagaccaatacttacccttgtatggtttcggtggatgttggagaagctt |
576 |
Q |
| |
|
||||| ||||| |||||| |||| || ||||| ||||||||||||||||||||| | |||| | |||||| | ||||||||||||||||||||||||| |
|
|
| T |
11502052 |
acaggtattggcatttgtgttcgtgattcggaaggtagttttgttctggctaagtctgttactcatccttgtgttgtttcggtggatgttggagaagctt |
11502151 |
T |
|
| Q |
577 |
tagggctgcactctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtgacagattctaaagtaacagttgatgccttcctttctac |
676 |
Q |
| |
|
||||||| || ||||||||||||||| || | |||||||| | |||||||||||||| | ||||| || ||||| |||||||||||||||||| |||| |
|
|
| T |
11502152 |
tagggctacattctgctttgcaatggatgagcgatatgcaatttgataatgtggacttcgaaacagactcaaaagtcacagttgatgccttccttgctac |
11502251 |
T |
|
| Q |
677 |
acggaacgacctgtctgaatttggttctattatttcttcttgtcgttctttgtatcataatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
|||| ||||||| ||||||||||||||||||||| | | ||||||||||||| || ||||||||||| |||||||||||||||||||||| |
|
|
| T |
11502252 |
acgggacgacctttctgaatttggttctattattacaacctgtcgttctttgtttcgcaatttattttctaactctagggtggagtttgtta |
11502343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 483 - 768
Target Start/End: Original strand, 16206275 - 16206560
Alignment:
| Q |
483 |
attggtatttgtattcgcgactcggagggtagttttgttctggctaagaccaatacttacccttgtatggtttcggtggatgttggagaagctttagggc |
582 |
Q |
| |
|
|||||||||||| ||||||| | || |||| ||||||||||||||||| | || |||||||||| ||| ||||||| || || ||||||||||||| |
|
|
| T |
16206275 |
attggtatttgtgttcgcgatgcagaaggtacgtttgttctggctaagactatgacatacccttgtactgttccggtggaagtgggtgaagctttagggc |
16206374 |
T |
|
| Q |
583 |
tgcactctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtgacagattctaaagtaacagttgatgccttcctttctacacggaa |
682 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| | || |||||||| |||| ||||| ||||| | |||| ||| |||||||||||||| | || |
|
|
| T |
16206375 |
tgcactctgctttgcaatggttgagtgatatgcagtttgacaatgtggattttgaaacagactctaagttgacagctgaagccttcctttctactagaaa |
16206474 |
T |
|
| Q |
683 |
cgacctgtctgaatttggttctattatttcttcttgtcgttctttgtatca-taatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
|||| |||| |||||||| | |||||||| || ||||||||||||| ||| || ||| ||||| |||||||||||||||||||||| |
|
|
| T |
16206475 |
cgacttgtccgaatttggatgcattatttcctcctgtcgttctttgt-tcattactttcttttctaactctagggtggagtttgtta |
16206560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 474 - 723
Target Start/End: Original strand, 2058435 - 2058684
Alignment:
| Q |
474 |
cgtacaggcattggtatttgtattcgcgactcggagggtagttttgttctggctaagaccaatacttacccttgtatggtttcggtggatgttggagaag |
573 |
Q |
| |
|
|||||||| |||| ||||||| |||| || || || ||| ||||||||||||||||| ||| || |||||||| |||||||| |||||||| |||| |
|
|
| T |
2058435 |
cgtacaggtattgatatttgtgttcgagattcagacagtacctttgttctggctaagactgttacatatccttgtattgtttcggttgatgttggtgaag |
2058534 |
T |
|
| Q |
574 |
ctttagggctgcactctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtgacagattctaaagtaacagttgatgccttcctttc |
673 |
Q |
| |
|
| ||||| | || || |||||||||||| | ||||||||||| |||||| ||||| |||| || || |||||||| ||| |||||| || || || |
|
|
| T |
2058535 |
ccttaggtttacattcggctttgcaatggctaagtgatatgcagttcgatagcgtggattttgaaacggactctaaagtcacatctgatgcttttctgtc |
2058634 |
T |
|
| Q |
674 |
tacacggaacgacctgtctgaatttggttctattatttcttcttgtcgtt |
723 |
Q |
| |
|
||| | || ||| |||||||||||||| |||||||| |||||||||| |
|
|
| T |
2058635 |
tactagaaatgacacatctgaatttggttccattatttcatcttgtcgtt |
2058684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 705 - 768
Target Start/End: Complemental strand, 27268070 - 27268007
Alignment:
| Q |
705 |
attatttcttcttgtcgttctttgtatcataatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
|||||||||||||||| |||||||| | | ||||||||| |||||||||||||||||||||| |
|
|
| T |
27268070 |
attatttcttcttgtcattctttgtttatttctttattttctaactctagggtggagtttgtta |
27268007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 708 - 764
Target Start/End: Original strand, 23379830 - 23379886
Alignment:
| Q |
708 |
atttcttcttgtcgttctttgtatcataatttattttccaactctagggtggagttt |
764 |
Q |
| |
|
|||||||||||||||||||||| | | | |||||||||||||||||||||||||| |
|
|
| T |
23379830 |
atttcttcttgtcgttctttgtttactgctgtattttccaactctagggtggagttt |
23379886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 617
Target Start/End: Original strand, 44886025 - 44886165
Alignment:
| Q |
477 |
acaggcattggtatttgtattcgcgactcggagggtagttttgttctggctaagaccaatacttacccttgtatggtttcggtggatgttggagaagctt |
576 |
Q |
| |
|
||||| ||||| |||||| |||| ||||| | |||| |||||| |||| ||||| | || || ||||||||||||||||| ||||| || ||||||| |
|
|
| T |
44886025 |
acaggtattggaatttgtgttcgtgactcaaatggtacttttgtgttggccaagacagacacatatccttgtatggtttcggttgatgtgggtgaagctt |
44886124 |
T |
|
| Q |
577 |
tagggctgcactctgctttgcaatggttgggtgatatgcag |
617 |
Q |
| |
|
|||| ||||||| ||| | |||||| | ||||||||||| |
|
|
| T |
44886125 |
taggtttgcactcggctctacaatggctaagtgatatgcag |
44886165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 560 - 727
Target Start/End: Complemental strand, 23762834 - 23762667
Alignment:
| Q |
560 |
ggatgttggagaagctttagggctgcactctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtgacagattctaaagtaacagtt |
659 |
Q |
| |
|
|||||| || |||||||| || ||||||| | ||| || ||||||| || |||||| | |||||||||||||| | ||||| ||||| | || || |
|
|
| T |
23762834 |
ggatgtgggtgaagctttgggcttgcactcagatttacagtggttggatggtatgcactttgataatgtggacttcgaaacagactctaagctgacggtg |
23762735 |
T |
|
| Q |
660 |
gatgccttcctttctacacggaacgacctgtctgaatttggttctattatttcttcttgtcgttcttt |
727 |
Q |
| |
|
||||| || || ||||| |||||||| ||||||||||| | ||||||||| |||||||||||||| |
|
|
| T |
23762734 |
gatgcttttctgtctactaggaacgacaaatctgaatttggctgtattatttcctcttgtcgttcttt |
23762667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 134; Significance: 2e-69; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 599 - 768
Target Start/End: Original strand, 4235165 - 4235334
Alignment:
| Q |
599 |
atggttgggtgatatgcagctcgataatgtggactttgtgacagattctaaagtaacagttgatgccttcctttctacacggaacgacctgtctgaattt |
698 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
4235165 |
atggttgggtgatatgcagctcgataatgtgggctttgtaacagattctaaagtaacagtttatgcattcctttctacacggaaagacctgtctgaattt |
4235264 |
T |
|
| Q |
699 |
ggttctattatttcttcttgtcgttctttgtatcataatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
|||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||| |
|
|
| T |
4235265 |
ggttctattatttctttttgtcgttctttgttccataatttattttctaactctagggtggagtttgtta |
4235334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 515 - 768
Target Start/End: Original strand, 18877942 - 18878195
Alignment:
| Q |
515 |
ttttgttctggctaagaccaatacttacccttgtatggtttcggtggatgttggagaagctttagggctgcactctgctttgcaatggttgggtgatatg |
614 |
Q |
| |
|
|||||||||||||||||| | ||| || ||||||| |||||| ||||| | ||| |||||||||||||||||||| |||||||||||||| ||||||| |
|
|
| T |
18877942 |
ttttgttctggctaagactattacatatccttgtactgtttcgatggatatgggaaaagctttagggctgcactctcctttgcaatggttgattgatatg |
18878041 |
T |
|
| Q |
615 |
cagctcgataatgtggactttgtgacagattctaaagtaacagttgatgccttcctttctacacggaacgacctgtctgaatttggttctattatttctt |
714 |
Q |
| |
|
||| | ||||| || ||||||| ||||| |||||| |||| |||||||||||||||| ||| |||||||| ||||||||||| ||| |||||||| | |
|
|
| T |
18878042 |
cagattgataacgtcgactttggaacagactctaaattaacggttgatgccttcctttttactaggaacgacttgtctgaattttgttgcattatttcct |
18878141 |
T |
|
| Q |
715 |
cttgtcgttctttgtatcataatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
| ||||||||||||| | ||||||||||| |||||||||||||||||||||| |
|
|
| T |
18878142 |
catgtcgttctttgttttgcaatttattttctaactctagggtggagtttgtta |
18878195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 474 - 768
Target Start/End: Original strand, 30859090 - 30859384
Alignment:
| Q |
474 |
cgtacaggcattggtatttgtattcgcgactcggagggtagttttgttctggctaagaccaatacttacccttgtatggtttcggtggatgttggagaag |
573 |
Q |
| |
|
|||||||| |||||||||||| ||||||| | || |||| ||||||||||||||||| | || |||||||||| ||| |||||| || || |||| |
|
|
| T |
30859090 |
cgtacaggtattggtatttgtgttcgcgatgcagaaggtacgtttgttctggctaagactatgacatacccttgtactgttcaggtggaagtgggtgaag |
30859189 |
T |
|
| Q |
574 |
ctttagggctgcactctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtgacagattctaaagtaacagttgatgccttcctttc |
673 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||| | || |||||||| || | ||||| ||||| | |||| ||| ||||||||||| |
|
|
| T |
30859190 |
ctttagggctgcactctgctttgcaatggttgagtgatatgcaatttgacaatgtggatttcgaaacagactctaagttgacagctgaagccttcctttc |
30859289 |
T |
|
| Q |
674 |
tacacggaacgacctgtctgaatttggttctattatttcttcttgtcgttctttgtatca-taatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
||| | |||||| |||| |||||||| | |||||||| || ||||||||||||| ||| || ||| ||||| |||||||||||||||||||||| |
|
|
| T |
30859290 |
tactagaaacgacttgtccgaatttggatgcattatttcctcatgtcgttctttgt-tcagtactttcttttctaactctagggtggagtttgtta |
30859384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 483 - 768
Target Start/End: Complemental strand, 30191351 - 30191066
Alignment:
| Q |
483 |
attggtatttgtattcgcgactcggagggtagttttgttctggctaagaccaatacttacccttgtatggtttcggtggatgttggagaagctttagggc |
582 |
Q |
| |
|
|||||||||||| ||||||| | || |||| ||||||||||||||||| | || |||||||||| |||||||||||||| || |||||||||||| |
|
|
| T |
30191351 |
attggtatttgtgttcgcgatgcagaaggtacgtttgttctggctaagactatgacatacccttgtactgtttcggtggatgtgggtgaagctttaggga |
30191252 |
T |
|
| Q |
583 |
tgcactctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtgacagattctaaagtaacagttgatgccttcctttctacacggaa |
682 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| | || |||||||| |||| ||||| ||||| | |||| ||| |||||||||||||| ||| |
|
|
| T |
30191251 |
tgcactctgctttgcaatggttgagtgatatgcagtttgacaatgtggattttgaaacagactctaagttgacagctgacgccttcctttctaccatgaa |
30191152 |
T |
|
| Q |
683 |
cgacctgtctgaatttggttctattatttcttcttgtcgttctttgtatca-taatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
|||| |||| |||||||| | ||||||| || ||||||||||||| ||| || || ||||| |||| ||||||||||||||||| |
|
|
| T |
30191151 |
cgacttgtccgaatttggctgcattattttctcctgtcgttctttgt-tcagtacttccttttctaactttagggtggagtttgtta |
30191066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 475 - 768
Target Start/End: Original strand, 55227340 - 55227633
Alignment:
| Q |
475 |
gtacaggcattggtatttgtattcgcgactcggagggtagttttgttctggctaagaccaatacttacccttgtatggtttcggtggatgttggagaagc |
574 |
Q |
| |
|
||||||| |||||||||||| ||||||| | || |||| ||||||||||||||||| | || |||||||||| ||||||||||| || || ||||| |
|
|
| T |
55227340 |
gtacaggtattggtatttgtgttcgcgatgcagaaggtacgtttgttctggctaagactatgacatacccttgtactgtttcggtggaagtgggtgaagc |
55227439 |
T |
|
| Q |
575 |
tttagggctgcactctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtgacagattctaaagtaacagttgatgccttcctttct |
674 |
Q |
| |
|
||||||| |||||||||||||||||||||| |||| |||||| | || |||||||| || | ||||| ||||| | |||| ||| |||||||||||| |
|
|
| T |
55227440 |
tttaggggtgcactctgctttgcaatggtttagtgaaatgcagtttgacaatgtggatttcgaaacagactctaagttgacagctgaagccttcctttct |
55227539 |
T |
|
| Q |
675 |
acacggaacgacctgtctgaatttggttctattatttcttcttgtcgttctttgtatca-taatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
|| | |||||| |||| |||||||| | |||||||| || ||||||||||||| ||| || ||| ||||| |||||||||||||||||||||| |
|
|
| T |
55227540 |
actagaaacgacttgtccgaatttggatgcattatttcctcctgtcgttctttgt-tcagtactttcttttctaactctagggtggagtttgtta |
55227633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 473 - 768
Target Start/End: Original strand, 14263765 - 14264060
Alignment:
| Q |
473 |
tcgtacaggcattggtatttgtattcgcgactcggagggtagttttgttctggctaagaccaatacttacccttgtatggtttcggtggatgttggagaa |
572 |
Q |
| |
|
||||||||| ||||| |||||| |||| |||||||| |||| |||||| | ||||| || | ||||| |||| || | ||| |||||||||||||| |
|
|
| T |
14263765 |
tcgtacaggtattggcatttgtgttcgtgactcggaaggtacttttgtcttagctaaaactattacttttccttatactgcttctgtggatgttggagag |
14263864 |
T |
|
| Q |
573 |
gctttagggctgcactctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtgacagattctaaagtaacagttgatgccttccttt |
672 |
Q |
| |
|
||| ||||| ||||||| ||| |||||||| || | ||||||||| | |||| |||| |||||| |||||||||||||||||||| || ||||||| | |
|
|
| T |
14263865 |
gctctagggttgcactccgctatgcaatggctgagcgatatgcagtttgatagtgtgaactttgaaacagattctaaagtaacagtcgacgccttccgct |
14263964 |
T |
|
| Q |
673 |
ctacacggaacgacctgtctgaatttggttctattatttcttcttgtcgttctttgtatcataatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
| | |||||| | ||||| ||||| | ||||||||||| ||||||||||||| || ||| || ||||||||||| ||||| |||||||||| |
|
|
| T |
14263965 |
ccgctaacaacgacttatctgagtttgggtgcattatttcttcatgtcgttctttgtttcgtaactttttttccaactccagggtagagtttgtta |
14264060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 693 - 766
Target Start/End: Complemental strand, 16582532 - 16582459
Alignment:
| Q |
693 |
gaatttggttctattatttcttcttgtcgttctttgtatcataatttattttccaactctagggtggagtttgt |
766 |
Q |
| |
|
|||||||| | |||||||||||||||||||| ||||| | | |||||||||||||| ||||||||||||||| |
|
|
| T |
16582532 |
gaatttggctgtattatttcttcttgtcgttatttgtttactgttttattttccaactttagggtggagtttgt |
16582459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 555 - 702
Target Start/End: Original strand, 19068950 - 19069097
Alignment:
| Q |
555 |
tcggtggatgttggagaagctttagggctgcactctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtgacagattctaaagtaa |
654 |
Q |
| |
|
||||||||||| || ||||| |||||| |||| |||| | | ||||||||| |||| |||||| | |||||| |||| |||| ||||| || || | | |
|
|
| T |
19068950 |
tcggtggatgtaggtgaagccttagggttgcattctgttgtacaatggttgagtgacatgcagtttgataatatggattttgaaacagactcgaagttga |
19069049 |
T |
|
| Q |
655 |
cagttgatgccttcctttctacacggaacgacctgtctgaatttggtt |
702 |
Q |
| |
|
||| |||||| ||||| |||| |||||||| |||| |||||||||| |
|
|
| T |
19069050 |
cagctgatgctttcctctctagcaggaacgacttgtccgaatttggtt |
19069097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0789 (Bit Score: 100; Significance: 5e-49; HSPs: 2)
Name: scaffold0789
Description:
Target: scaffold0789; HSP #1
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 477 - 676
Target Start/End: Complemental strand, 4582 - 4383
Alignment:
| Q |
477 |
acaggcattggtatttgtattcgcgactcggagggtagttttgttctggctaagaccaatacttacccttgtatggtttcggtggatgttggagaagctt |
576 |
Q |
| |
|
||||| ||||| |||||| ||||| ||||||| |||| |||||||||||||||||| | ||| || |||| || ||||| |||||||| |||||||||| |
|
|
| T |
4582 |
acaggtattggcatttgtgttcgcaactcggaaggtatttttgttctggctaagactattacatatccttatactgtttcagtggatgtgggagaagctt |
4483 |
T |
|
| Q |
577 |
tagggctgcactctgctttgcaatggttgggtgatatgcagctcgataatgtggactttgtgacagattctaaagtaacagttgatgccttcctttctac |
676 |
Q |
| |
|
|||||||||||||| |||||||||||||| ||||||||||| | ||||| || ||||||| ||||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
4482 |
tagggctgcactctactttgcaatggttgagtgatatgcagattgataacgtcgactttgcaacagactctaaactaacagttgatgccttcctttctac |
4383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0789; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 735 - 768
Target Start/End: Complemental strand, 4368 - 4335
Alignment:
| Q |
735 |
aatttattttccaactctagggtggagtttgtta |
768 |
Q |
| |
|
||||||||||| |||||||||||||||||||||| |
|
|
| T |
4368 |
aatttattttctaactctagggtggagtttgtta |
4335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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