View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1277R-Insertion-8 (Length: 157)
Name: NF1277R-Insertion-8
Description: NF1277R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1277R-Insertion-8 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 129; Significance: 4e-67; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 129; E-Value: 4e-67
Query Start/End: Original strand, 9 - 157
Target Start/End: Original strand, 29878490 - 29878637
Alignment:
| Q |
9 |
ttttgtacacacgacgcgaccaattttctgcatacaagaaaatcccaatttcaatcattacaactacaacaattgtttgaacaaacatattcatgaggtt |
108 |
Q |
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| T |
29878490 |
ttttgtacacacgacgcgaccaattttctgcatacaagaaaatcccaatttcaatcattacaactacaacaattgtttgaacaaacataattatgaggtt |
29878589 |
T |
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| Q |
109 |
attccttttcactttccaatttatttgtttaccttaggctatgtttcat |
157 |
Q |
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| T |
29878590 |
attccttttcac-ttccaatttttttgtttaccttaggctatgtttcat |
29878637 |
T |
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