View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1277_low_2 (Length: 729)

Name: NF1277_low_2
Description: NF1277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1277_low_2
NF1277_low_2
[»] chr1 (12 HSPs)
chr1 (368-685)||(23707191-23707505)
chr1 (132-369)||(6226868-6227106)
chr1 (92-362)||(25031091-25031361)
chr1 (107-362)||(9477786-9478042)
chr1 (92-361)||(1016702-1016972)
chr1 (92-362)||(10780869-10781128)
chr1 (85-362)||(9539313-9539580)
chr1 (92-361)||(34912456-34912727)
chr1 (85-222)||(8065119-8065257)
chr1 (118-240)||(27464069-27464192)
chr1 (211-362)||(42311323-42311464)
chr1 (92-227)||(23353534-23353669)
[»] chr6 (11 HSPs)
chr6 (85-369)||(21883396-21883681)
chr6 (92-361)||(24901827-24902097)
chr6 (92-361)||(18817058-18817328)
chr6 (83-315)||(14607499-14607732)
chr6 (130-362)||(2919730-2919963)
chr6 (135-362)||(6689385-6689613)
chr6 (200-364)||(19266890-19267054)
chr6 (415-535)||(11842814-11842938)
chr6 (85-246)||(30705427-30705588)
chr6 (145-245)||(25085237-25085338)
chr6 (172-233)||(22260250-22260310)
[»] chr3 (24 HSPs)
chr3 (85-364)||(38573115-38573395)
chr3 (85-362)||(24310015-24310293)
chr3 (112-362)||(23778423-23778672)
chr3 (85-362)||(36477731-36478009)
chr3 (107-357)||(7856660-7856907)
chr3 (92-361)||(26903296-26903566)
chr3 (92-361)||(36617474-36617744)
chr3 (370-684)||(54139775-54140097)
chr3 (374-621)||(52807990-52808236)
chr3 (211-362)||(7728748-7728899)
chr3 (133-313)||(25031993-25032177)
chr3 (92-362)||(36475613-36475886)
chr3 (211-362)||(8034854-8035005)
chr3 (371-535)||(53286755-53286921)
chr3 (107-362)||(26285521-26285766)
chr3 (113-227)||(35502350-35502465)
chr3 (107-162)||(52308781-52308836)
chr3 (128-227)||(30136769-30136866)
chr3 (128-227)||(30142898-30142995)
chr3 (128-227)||(30146320-30146417)
chr3 (171-231)||(41897717-41897777)
chr3 (550-593)||(1924485-1924528)
chr3 (164-227)||(6714029-6714092)
chr3 (396-445)||(1924243-1924293)
[»] chr5 (15 HSPs)
chr5 (92-362)||(36745085-36745356)
chr5 (92-361)||(43144709-43144979)
chr5 (130-369)||(36633672-36633912)
chr5 (92-314)||(17076356-17076579)
chr5 (108-315)||(25819240-25819447)
chr5 (132-227)||(39509268-39509364)
chr5 (113-227)||(5569121-5569242)
chr5 (92-196)||(30078095-30078202)
chr5 (169-243)||(11498187-11498262)
chr5 (169-243)||(11505543-11505618)
chr5 (169-243)||(11512937-11513012)
chr5 (169-243)||(11520313-11520388)
chr5 (169-243)||(11527721-11527796)
chr5 (85-152)||(34750977-34751044)
chr5 (107-152)||(5070012-5070057)
[»] chr7 (23 HSPs)
chr7 (108-361)||(33941327-33941581)
chr7 (85-362)||(2945083-2945362)
chr7 (92-355)||(1691793-1692062)
chr7 (85-303)||(24658561-24658780)
chr7 (92-361)||(43265631-43265901)
chr7 (92-360)||(30074330-30074588)
chr7 (85-238)||(38300188-38300341)
chr7 (234-361)||(38293505-38293632)
chr7 (211-362)||(10702820-10702971)
chr7 (83-361)||(46089882-46090159)
chr7 (132-259)||(8256734-8256862)
chr7 (93-227)||(25233095-25233230)
chr7 (109-243)||(27080575-27080710)
chr7 (109-243)||(27197591-27197726)
chr7 (209-362)||(32221704-32221856)
chr7 (249-362)||(24039500-24039613)
chr7 (96-223)||(39785648-39785776)
chr7 (172-243)||(1247839-1247910)
chr7 (169-239)||(8062569-8062639)
chr7 (169-243)||(38838337-38838411)
chr7 (145-243)||(25617858-25617957)
chr7 (92-227)||(26787423-26787560)
chr7 (132-227)||(33598005-33598101)
[»] chr4 (19 HSPs)
chr4 (92-362)||(4377427-4377699)
chr4 (85-362)||(36248011-36248289)
chr4 (92-362)||(33518221-33518491)
chr4 (108-292)||(2815733-2815920)
chr4 (370-685)||(48431609-48431920)
chr4 (130-362)||(50723002-50723224)
chr4 (92-226)||(2158776-2158911)
chr4 (200-362)||(5882679-5882841)
chr4 (212-318)||(2185307-2185413)
chr4 (145-362)||(24153718-24153925)
chr4 (85-227)||(1112138-1112280)
chr4 (274-362)||(2158909-2158997)
chr4 (92-227)||(25023057-25023192)
chr4 (145-243)||(40407798-40407897)
chr4 (203-243)||(56094925-56094965)
chr4 (145-243)||(13834173-13834272)
chr4 (206-305)||(49078356-49078455)
chr4 (177-243)||(35255142-35255208)
chr4 (207-240)||(32934340-32934373)
[»] chr8 (16 HSPs)
chr8 (83-362)||(44873422-44873703)
chr8 (92-361)||(29866311-29866581)
chr8 (93-361)||(2148528-2148797)
chr8 (84-369)||(24556586-24556872)
chr8 (92-361)||(45485892-45486162)
chr8 (110-362)||(32161081-32161335)
chr8 (109-362)||(6802449-6802703)
chr8 (83-243)||(7681171-7681332)
chr8 (93-196)||(34696879-34696983)
chr8 (145-243)||(41303312-41303411)
chr8 (145-243)||(3662180-3662280)
chr8 (107-164)||(11993599-11993656)
chr8 (92-227)||(43421754-43421889)
chr8 (92-152)||(10381567-10381627)
chr8 (176-243)||(4587093-4587160)
chr8 (128-223)||(7387963-7388054)
[»] chr2 (14 HSPs)
chr2 (85-362)||(3356782-3357059)
chr2 (85-362)||(32033113-32033389)
chr2 (211-362)||(6141559-6141710)
chr2 (131-369)||(11562191-11562429)
chr2 (211-362)||(18458861-18459012)
chr2 (92-305)||(4075588-4075801)
chr2 (111-362)||(18703350-18703599)
chr2 (201-361)||(4075822-4075982)
chr2 (113-221)||(7700509-7700618)
chr2 (145-243)||(7165409-7165508)
chr2 (113-227)||(38417898-38418013)
chr2 (130-227)||(16639002-16639099)
chr2 (109-192)||(34878498-34878582)
chr2 (169-245)||(20966312-20966385)
[»] scaffold0684 (1 HSPs)
scaffold0684 (95-152)||(4254-4311)
[»] scaffold0535 (1 HSPs)
scaffold0535 (166-227)||(9895-9956)
[»] scaffold0163 (1 HSPs)
scaffold0163 (95-152)||(3807-3864)
[»] scaffold0002 (1 HSPs)
scaffold0002 (83-152)||(461228-461296)


Alignment Details
Target: chr1 (Bit Score: 234; Significance: 1e-129; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 368 - 685
Target Start/End: Original strand, 23707191 - 23707505
Alignment:
Q  368 tctcttgcaattgaaattgaaactccaggtttctgcataaattgtttaaggaatttcaaaatgaatcacagtcaagtaaactagttattagctttccaat 467  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23707191 tctcttgcaattgaaattgaaactccaggtttctgcataaattgtttaaggaatttcaaaatgaatcacagtcaagtaaactagttattagctttccaat 23707290  T
Q  468 tgaaattagaatatctaccactttagcttctagagtatgtgtttcctcaaacgtcaaattgcttacatatcttcttctctttgaaaaataaaattcttat 567  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |  |||| ||||||| |||||    
T  23707291 tgaaattagaatatctaccactttagcttctagagtatgtgtttcctcaaacgtcaaattgcttacatatc-tcctct-tgagaaacataaaatccttat 23707388  T
Q  568 tagtttgatctgacctctcctattcctcaacaatgcccaaggttactaaggtccggtttgaaaaggccaatataaatagcatttttcttttgacttttgc 667  Q
    |||||||||||| ||||| |||| || |||||||||| ||| |||||||||||| ||||||||| |||||||||||||||| |||||||||||| |||||    
T  23707389 tagtttgatctggcctcttctataccccaacaatgcctaagtttactaaggtcctgtttgaaaatgccaatataaatagca-ttttcttttgacgtttgc 23707487  T
Q  668 aatgccattcgtgtcatc 685  Q
    |||||||||| |||||||    
T  23707488 aatgccattcctgtcatc 23707505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 132 - 369
Target Start/End: Original strand, 6226868 - 6227106
Alignment:
Q  132 aaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtttataaaccctagcaaatgtgttgcacttatttgtttccac 230  Q
    |||| ||||| ||||||||||||||||||| || ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6226868 aaaatacacggtcaacacttgcagttgctatcggcaagagcaaagtcaacttcaaaagtttataaaccatagcaaatgtgttgcacttatttgtttccac 6226967  T
Q  231 aagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaacatttgtaacataattcttaagttgagtgagtaacgccact 330  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||    
T  6226968 aagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaacatttttaacataattcttaagttgagtgtgtaacgctact 6227067  T
Q  331 tcaggaacatctataaaatcatttggataaaatttagtc 369  Q
    || |||||||||||||||| |||||||||||||| ||||    
T  6227068 tccggaacatctataaaataatttggataaaattcagtc 6227106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 92 - 362
Target Start/End: Original strand, 25031091 - 25031361
Alignment:
Q  92 attttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtt 190  Q
    |||||||||| ||  ||| ||||||||||||||||   ||||||||||||||||||| ||||||||| ||||| ||||||||||| ||||||||||||||    
T  25031091 attttgttacataggttaatcttcacaactttcatatttgaaaaaacacgttcaacaattgcagttgttaccggcaagagcaaagtcaacttcaaaagtt 25031190  T
Q  191 tataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaac 290  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||   |||||| ||| |||| |||||||||||||    
T  25031191 tataaaccatagcaaatgtgttgcatttatttgtttccacaagttttgcacaaagatctgaaagccctctgaacttagcaa-ttttaggtcagatcgaac 25031289  T
Q  291 atttgtaacataattcttaagttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaaa 362  Q
    ||||||||||||| |||||||||||||| ||||||||||||| |  ||||||||||||||||||||||||||    
T  25031290 atttgtaacataactcttaagttgagtgtgtaacgccacttccgacacatctataaaatcatttggataaaa 25031361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 107 - 362
Target Start/End: Original strand, 9477786 - 9478042
Alignment:
Q  107 ttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctacc-gcaagagcaaagccaacttcaaaagtttataaaccctagcaa 205  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||| |||||||  ||| ||| |||||||||||||||| |||||||||| ||||||    
T  9477786 ttactcttcacaactttcatagctgaaaaaacacgtttaacacttgcaattgctactagcatgagaaaagccaacttcaaaactttataaaccatagcaa 9477885  T
Q  206 atgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaacatttgtaacataatt 305  Q
    |||||||||||||||||||||||||||||||||| || |||||| ||||||||| ||||||| ||| |||||||| |||||||||||||||| |||||||    
T  9477886 atgtgttgcacttatttgtttccacaagttttgcgcatagatcttaaagccctttcaacttagcaaattttgggttagatcgaacatttgtaccataatt 9477985  T
Q  306 cttaagttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaaa 362  Q
    ||||||||||  | ||||| | ||||| || ||||||||||||||||||||||||||    
T  9477986 cttaagttgacagcgtaacactacttccggcacatctataaaatcatttggataaaa 9478042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 92 - 361
Target Start/End: Complemental strand, 1016972 - 1016702
Alignment:
Q  92 attttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtt 190  Q
    |||||||||| ||| | |||||||||||  ||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |    
T  1016972 attttgttacgtaaatgactcttcacaatcttcatagctgaaaaaacacgttcaacacttgcagttgcaaccggcaagagcaaagccaacttcaaaagct 1016873  T
Q  191 tataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaac 290  Q
    || |||||  ||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||   || |||||| ||||||  |||    
T  1016872 taaaaaccaaagcaaatgtcttgcacttatttgtttccacaagtattgcacaaagatccgaaagccctttcaactttgaaaattttggatcagatttaac 1016773  T
Q  291 atttgtaacataattcttaagttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaa 361  Q
    |||| |||||||||| | ||||||  || | ||| ||||||| |  ||||||| |||||||||||||||||    
T  1016772 atttctaacataattatgaagttgtctgcgcaactccacttccgacacatctacaaaatcatttggataaa 1016702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 92 - 362
Target Start/End: Complemental strand, 10781128 - 10780869
Alignment:
Q  92 attttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtt 190  Q
    |||||||||| ||  ||||||||||  ||||||||  ||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||    
T  10781128 attttgttacataggttactcttcaacactttcatatctgaaaaaacacgtt-aacacttgcagttgctaccggcaagagcaaaaccaacttcaaaagtt 10781030  T
Q  191 tataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaac 290  Q
    |||||||  ||| |||||||||||||||||||||||||           ||||||||||||||| |||| ||||||| ||| |||| |||||||||||||    
T  10781029 tataaactatagtaaatgtgttgcacttatttgtttcc-----------acaaagatctgaaagtcctttcaacttagcaaattttaggtcagatcgaac 10780941  T
Q  291 atttgtaacataattcttaagttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaaa 362  Q
    || |||||||||||| |||||||||||| ||||||||||||  |  ||||||||||||| ||||||||||||    
T  10780940 atatgtaacataattattaagttgagtgcgtaacgccactttcgacacatctataaaattatttggataaaa 10780869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 85 - 362
Target Start/End: Complemental strand, 9539580 - 9539313
Alignment:
Q  85 atcatcgattttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttc 183  Q
    |||||| |||||||||| ||  ||||||||||||| |||||| |||||||||||||||| ||||||||||||||||| || |||||||||| ||||||||    
T  9539580 atcatccattttgttacataggttactcttcacaattttcatagctgaaaaaacacgtttaacacttgcagttgctatcggcaagagcaaaaccaacttc 9539481  T
Q  184 aaaagtttataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcag 283  Q
    |||||||||||||||  | ||||||||||||||||||||||||||           ||||||||||| |||||| | ||||||| ||| |||||| ||||    
T  9539480 aaaagtttataaaccaaaacaaatgtgttgcacttatttgtttcc-----------acaaagatctggaagccccttcaacttagcaaattttggatcag 9539392  T
Q  284 atcgaacatttgtaacataattcttaagttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaaa 362  Q
    ||||||||||||||||||||||||||||||||  |  ||||||||||||    || |||||||||| ||||||||||||    
T  9539391 atcgaacatttgtaacataattcttaagttgatggcataacgccacttccaacacttctataaaattatttggataaaa 9539313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 92 - 361
Target Start/End: Original strand, 34912456 - 34912727
Alignment:
Q  92 attttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtt 190  Q
    |||||||||| ||  |||||||| ||||||||||| ||||||||||||| |||||||||||||||| ||| || ||||  |||||||||||||||||| |    
T  34912456 attttgttacataggttactcttaacaactttcatagctgaaaaaacacattcaacacttgcagttactatcggcaaggacaaagccaacttcaaaagct 34912555  T
Q  191 tataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaag-cccttacaacttaacaacttttgggtcagatcgaa 289  Q
    |||||||  |||  ||||||||||||||||||||||||| |||||||| ||||||||||||||| |  ||  |||||| ||| ||||  || |||| |||    
T  34912556 tataaactatagtgaatgtgttgcacttatttgtttccagaagttttggacaaagatctgaaagtcattttaaacttagcaaattttaagttagattgaa 34912655  T
Q  290 catttgtaacataattcttaagttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaa 361  Q
    ||||| ||||||||||| ||||||||  | |||||||||||||  |||||||||||||||||||||||||||    
T  34912656 catttataacataattcctaagttgatggtgtaacgccacttccagaacatctataaaatcatttggataaa 34912727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 85 - 222
Target Start/End: Original strand, 8065119 - 8065257
Alignment:
Q  85 atcatcgattttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctacc-gcaagagcaaagccaacttc 183  Q
    |||||| ||||| |||| ||  ||||||||||||| |||||| |||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||    
T  8065119 atcatccattttattacataggttactcttcacaagtttcatagctgaaaaaacacgtttaacaattgcagttgctaccagcaagagcaaagccaacttc 8065218  T
Q  184 aaaagtttataaaccctagcaaatgtgttgcacttattt 222  Q
    ||||||||||||||| || ||||||||||||| ||||||    
T  8065219 aaaagtttataaaccataacaaatgtgttgcatttattt 8065257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 118 - 240
Target Start/End: Complemental strand, 27464192 - 27464069
Alignment:
Q  118 aactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtttataaaccctagcaaatgtgttgcac 216  Q
    ||||||||| ||||||||||||||||||||| |||||| |||||||| | ||| |||||||||||||||||| ||||||| | || ||||||| ||||||    
T  27464192 aactttcatagctgaaaaaacacgttcaacaattgcagctgctaccggctagaacaaagccaacttcaaaagcttataaatcataacaaatgtattgcac 27464093  T
Q  217 ttatttgtttccacaagttttgca 240  Q
    ||||||||||||||||||||||||    
T  27464092 ttatttgtttccacaagttttgca 27464069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 211 - 362
Target Start/End: Complemental strand, 42311464 - 42311323
Alignment:
Q  211 ttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaacatttgtaacataattcttaa 310  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||  |||||| ||| ||||           |||||||||||||||||||  ||    
T  42311464 ttgcacttatttgtttccacaagttttgcataaagatctaaaagccctttgaacttagcaaatttta----------aacatttgtaacataattcacaa 42311375  T
Q  311 gttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaaa 362  Q
    |||||||| |||||| |||||| |  | ||||||||||||||||||||||||    
T  42311374 gttgagtgcgtaacgtcacttccgacatatctataaaatcatttggataaaa 42311323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 92 - 227
Target Start/End: Original strand, 23353534 - 23353669
Alignment:
Q  92 attttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccgc-aagagcaaagccaacttcaaaagtt 190  Q
    ||||||||||  | || ||| |||||||||||||| ||| ||||||||| ||||||| ||||| |||||||||  ||||||||| ||||||||||||  |    
T  23353534 attttgttacgaagttgactattcacaactttcatagct-aaaaaacactttcaacagttgcaattgctaccggtaagagcaaaaccaacttcaaaaact 23353632  T
Q  191 tataaaccctagcaaatgtgttgcacttatttgtttc 227  Q
    ||||||   ||| |||||||||| || ||||| ||||    
T  23353633 tataaattatagtaaatgtgttgtacctatttatttc 23353669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 214; Significance: 1e-117; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 85 - 369
Target Start/End: Original strand, 21883396 - 21883681
Alignment:
Q  85 atcatcgattttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttc 183  Q
    |||||| |||||||||||||||||||||||| ||||||| || | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  21883396 atcatctattttgttacttaatttactcttctcaacttttatagttgaaaaaacacgttcaacacttgcagttgctaccggcaagagcaaagccaacttc 21883495  T
Q  184 aaaagtttataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcag 283  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  21883496 aaaagtttataaaccatagcaaatgtgttgtacttatttgtttccacaagttttgcacaaagatctaaaagccattacaacttaacaacttttgggtcag 21883595  T
Q  284 atcgaacatttgtaacataattcttaagttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaaatttagtc 369  Q
    || |||||||||||||||||||||||||||||||| ||||||||||||  ||| ||||||||||| ||||||||||||||| ||||    
T  21883596 attgaacatttgtaacataattcttaagttgagtgtgtaacgccactttcggagcatctataaaaacatttggataaaattcagtc 21883681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 92 - 361
Target Start/End: Original strand, 24901827 - 24902097
Alignment:
Q  92 attttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtt 190  Q
    |||||||||| ||| | |||||||||||  ||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |    
T  24901827 attttgttacgtaaatgactcttcacaatcttcatagctgaaaaaacacgttcaacacttgcagttgcaaccggcaagagcaaagccaacttcaaaagct 24901926  T
Q  191 tataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaac 290  Q
    || |||||  ||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||  ||| |||||| ||||||  |||    
T  24901927 taaaaaccaaagcaaatgtcttgcacttatttgtttccacaagtattgcacaaagatccgaaagccctttcaactttgcaaattttggatcagatttaac 24902026  T
Q  291 atttgtaacataattcttaagttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaa 361  Q
    |||| |||||||||||| ||||||  || | ||| ||||||| |  ||||||| |||||||||||||||||    
T  24902027 atttctaacataattctgaagttgtctgcgcaactccacttccgacacatctacaaaatcatttggataaa 24902097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 92 - 361
Target Start/End: Original strand, 18817058 - 18817328
Alignment:
Q  92 attttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtt 190  Q
    |||||||||| ||| | |||||||||||  ||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |    
T  18817058 attttgttacgtaaatgactcttcacaatcttcatagctgaaaaaacacgttcaacacttgcagttgcaaccggcaagagcaaagccaacttcaaaagct 18817157  T
Q  191 tataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaac 290  Q
    || |||||  ||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||  ||| |||||| ||||||  |||    
T  18817158 taaaaaccaaagcaaatgtcttgcacttatttgtttccacaagtattgcacaaagatccgaaagccctttcaactttgcaaattttggatcagatttaac 18817257  T
Q  291 atttgtaacataattcttaagttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaa 361  Q
    |||| |||||||||| | ||||||  || | ||| ||||||| |  ||||||| |||||||||||||||||    
T  18817258 atttctaacataattatgaagttgtctgcgcaactccacttccgacacatctacaaaatcatttggataaa 18817328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 83 - 315
Target Start/End: Complemental strand, 14607732 - 14607499
Alignment:
Q  83 taatcatcgattttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaact 181  Q
    |||||||| |||| ||||| ||  |||||||||||||||||||| | |||||||||||||| |||||||||||||||||||| ||||||||||| |||||    
T  14607732 taatcatctatttggttacataggttactcttcacaactttcataggtgaaaaaacacgtttaacacttgcagttgctaccgtcaagagcaaagtcaact 14607633  T
Q  182 tcaaaagtttataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtc 281  Q
    ||||||||||||||||| || |  |||||||||||||||||||||| ||| |||| | |||||||||||||||||  |  |||||| ||| |||||||||    
T  14607632 tcaaaagtttataaaccataacttatgtgttgcacttatttgtttctacatgtttagaacaaagatctgaaagccaatttaacttagcaaattttgggtc 14607533  T
Q  282 agatcgaacatttgtaacataattcttaagttga 315  Q
    | ||||||||||||||||||||||||||||||||    
T  14607532 atatcgaacatttgtaacataattcttaagttga 14607499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 130 - 362
Target Start/End: Complemental strand, 2919963 - 2919730
Alignment:
Q  130 tgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtttataaaccctagcaaatgtgttgcacttatttgtttcc 228  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||| || ||||||||||||| ||||||||||||    
T  2919963 tgaaaaaacacgttcaacacttgcagttgctaccggcaagagcaaaaccaacttcaaaagttaataaaccataacaaatgtgttgcatttatttgtttcc 2919864  T
Q  229 acaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaacatttgtaacataattcttaagttgagtgagtaacgcca 328  Q
    | |||||||||||||||||| ||||||| || ||||||| ||| |||||||||| ||||||||||||| |||||| | |||||||||  | |||||||||    
T  2919863 ataagttttgcacaaagatccgaaagccgtttcaacttagcaaattttgggtcaaatcgaacatttgttacataactattaagttgatggtgtaacgcca 2919764  T
Q  329 cttcaggaacatctataaaatcatttggataaaa 362  Q
     |||    |||||||| |||| |||| |||||||    
T  2919763 attccaacacatctattaaatgattttgataaaa 2919730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 135 - 362
Target Start/End: Original strand, 6689385 - 6689613
Alignment:
Q  135 aaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtttataaaccctagcaaatgtgttgcacttatttgtttccacaag 233  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| | |||||||||||||| |||||||||||| ||||||    
T  6689385 aaacacgttcaacacttgcagttgctaccggcaagagcaaagtcaacttcaaaagcttataaatcatagcaaatgtgttgtacttatttgttttcacaag 6689484  T
Q  234 ttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaacatttgtaacataattcttaagttgagtgagtaacgccacttca 333  Q
    |||| ||| ||||||||||||||||| ||||||| ||| ||| ||| ||||| ||| |||| |||||||||| |||||||||  | ||||||||||||      
T  6689485 ttttacacgaagatctgaaagccctttcaacttagcaaatttagggccagattgaaaatttataacataatttttaagttgatggtgtaacgccactttc 6689584  T
Q  334 ggaacatctataaaatcatttggataaaa 362  Q
    |  | ||||||||||||||||||||||||    
T  6689585 gacatatctataaaatcatttggataaaa 6689613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 200 - 364
Target Start/End: Complemental strand, 19267054 - 19266890
Alignment:
Q  200 tagcaaatgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaacatttgtaac 299  Q
    ||||| ||||| |||| | |||||||| ||||||||||||| ||||||||||||||||||  || ||| ||| |||||||||| ||||||||||||||||    
T  19267054 tagcatatgtgctgcattaatttgttttcacaagttttgcataaagatctgaaagcccttttaatttagcaaattttgggtcaaatcgaacatttgtaac 19266955  T
Q  300 ataattcttaagttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaaatt 364  Q
    |||||| |||||||||  | ||||||||||||| |  |||||||| |||||||||||||||||||    
T  19266954 ataatttttaagttgatggcgtaacgccacttccgacacatctattaaatcatttggataaaatt 19266890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 415 - 535
Target Start/End: Complemental strand, 11842938 - 11842814
Alignment:
Q  415 aaggaatttcaaaatgaatcacagtcaagtaaactagttattagctttccaattgaaa--ttaga--atatctaccactttagcttctagagtatgtgtt 510  Q
    ||||||| |||| ||||||  |||||||||||||||| ||||||||||||| ||||    |||||  |||||||||||||||||||||||||||||||||    
T  11842938 aaggaatgtcaagatgaattgcagtcaagtaaactagatattagctttccagttgatcctttagacaatatctaccactttagcttctagagtatgtgtt 11842839  T
Q  511 tcctcaaacgtcaaattgcttacat 535  Q
    |||||||| |||||| || ||||||    
T  11842838 tcctcaaatgtcaaactgattacat 11842814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 85 - 246
Target Start/End: Original strand, 30705427 - 30705588
Alignment:
Q  85 atcatcgattttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttc 183  Q
    |||| |||||||||||| || || | |||||||||  ||||| ||||||||| ||  ||||| ||||||| ||||||||| |||||||||||  ||||||    
T  30705427 atcaccgattttgttacatagttgattcttcacaatcttcatagctgaaaaa-catattcaaaacttgcaattgctaccgacaagagcaaagttaacttc 30705525  T
Q  184 aaaagtttataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaaaga 246  Q
    |||  |||||||||| |||||||| | || ||| |||||| ||||||||||||||||||||||    
T  30705526 aaatatttataaaccatagcaaatattttacacctatttgcttccacaagttttgcacaaaga 30705588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 145 - 245
Target Start/End: Complemental strand, 25085338 - 25085237
Alignment:
Q  145 aacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtttataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaa 243  Q
    |||| |||| |||||||||| ||| |||||||| | ||||||||| |||| || | ||| ||||||||||||||||||||||| ||||||||||||||||    
T  25085338 aacatttgcggttgctaccgacaaaagcaaagcaaccttcaaaagcttatgaatcatagtaaatgtgttgcacttatttgttttcacaagttttgcacaa 25085239  T
Q  244 ag 245  Q
    ||    
T  25085238 ag 25085237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 172 - 233
Target Start/End: Original strand, 22260250 - 22260310
Alignment:
Q  172 aaagccaacttcaaaagtttataaaccctagcaaatgtgttgcacttatttgtttccacaag 233  Q
    |||||||| |||||||| ||||||||  |||||||||||||| |||||||||||||||||||    
T  22260250 aaagccaaattcaaaagcttataaaca-tagcaaatgtgttgtacttatttgtttccacaag 22260310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 201; Significance: 1e-109; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 85 - 364
Target Start/End: Original strand, 38573115 - 38573395
Alignment:
Q  85 atcatcgattttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttc 183  Q
    |||||| |||||||||||||||||| |||||||||||||| | |||||||||||| | ||||||||||||||||||| || |||||||||||||||||||    
T  38573115 atcatcaattttgttacttaatttattcttcacaactttcgtagctgaaaaaacatgatcaacacttgcagttgctatcggcaagagcaaagccaacttc 38573214  T
Q  184 aaaagtttataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcag 283  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  38573215 aaaagtttataaacaatagcaaatgtgttgcacttatttgtttccacaagttttgcacaaagatttgaaagcccttacaacttaacaacttttgggtcag 38573314  T
Q  284 atcgaacatttgtaacataattcttaagttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaaatt 364  Q
    ||||||||| |||||||||||||||||| |||||| ||||||| ||||| ||||||||||||||||  ||| |||||||||    
T  38573315 atcgaacatctgtaacataattcttaagctgagtgcgtaacgctacttccggaacatctataaaattgttttgataaaatt 38573395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 85 - 362
Target Start/End: Original strand, 24310015 - 24310293
Alignment:
Q  85 atcatcgattttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttc 183  Q
    |||||| ||||| |||| ||  ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||  ||||||||||| |||||||    
T  24310015 atcatccattttattacatatgttactcttcacaactttcatatctgaaaaaacacgttcaacacttgcagttgctaccaacaagagcaaagtcaacttc 24310114  T
Q  184 aaaagtttataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcag 283  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||| || ||| ||||| |||||    
T  24310115 aaaagtttataaaccatagcaaatgtgtcgcacttatttgtttccacaagttttgcacacagatctgaaagccctttcaacatagcaaattttgagtcag 24310214  T
Q  284 atcgaacatttgtaacataattcttaagttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaaa 362  Q
    ||||||||||||||||||||||||||||||| ||| |||| |||||||| || ||||||||||||||||||||||||||    
T  24310215 atcgaacatttgtaacataattcttaagttgcgtgtgtaatgccacttccggcacatctataaaatcatttggataaaa 24310293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 177; E-Value: 5e-95
Query Start/End: Original strand, 112 - 362
Target Start/End: Original strand, 23778423 - 23778672
Alignment:
Q  112 cttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctacc-gcaagagcaaagccaacttcaaaagtttataaaccctagcaaatgtg 210  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  23778423 cttcacaactttcatagctaaaaaaacacgttcaacacttgcagttgctaccagcaagagcaaagccaacttcaaaagtttataaaccatagcaaatgtg 23778522  T
Q  211 ttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaacatttgtaacataattcttaa 310  Q
    ||||| ||||||||||||||||||||  ||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  23778523 ttgcatttatttgtttccacaagttt--cacaaagatcttaaagccctttcaacttaacaaattttgggtcagatcgaacatttgcaacataattcttaa 23778620  T
Q  311 gttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaaa 362  Q
    |||||  | |||||| |||||| || ||||||||||||||||||||||||||    
T  23778621 gttgacggggtaacgtcacttccggcacatctataaaatcatttggataaaa 23778672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 167; E-Value: 5e-89
Query Start/End: Original strand, 85 - 362
Target Start/End: Complemental strand, 36478009 - 36477731
Alignment:
Q  85 atcatcgattttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttc 183  Q
    |||||| |||||||||| ||  ||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  36478009 atcatccattttgttacataggttactcttcacaactttcatatctgaaaaaacacgttcaacacttgccgttgctaccgacaaaagcaaagccaacttc 36477910  T
Q  184 aaaagtttataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcag 283  Q
    |||||||||||   | ||||||||| ||||||||||||| ||| |||| ||||||||||||||| ||||||||||| ||||||| ||| |||||||||||    
T  36477909 aaaagtttatagggcatagcaaatgcgttgcacttatttattttcacatgttttgcacaaagatatgaaagccctttcaacttagcaaattttgggtcag 36477810  T
Q  284 atcgaacatttgtaacataattcttaagttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaaa 362  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||  || ||||||||||||| |||| |||||||    
T  36477809 atcgaacatttgtaacataattcttaagttgagtgtgtaacgccactttcggcacatctataaaattattttgataaaa 36477731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 107 - 357
Target Start/End: Original strand, 7856660 - 7856907
Alignment:
Q  107 ttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtttataaaccctagcaa 205  Q
    ||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||| ||    
T  7856660 ttactcttcacaaatttcatagctgaaaaa-cacgttcaacacttgcagttgctaccggcaaaagcaaagccaacttcaaaagtttataaaccataggaa 7856758  T
Q  206 atgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaacatttgtaacataatt 305  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| | || | |||||||||||||||||||||||||  ||||    
T  7856759 acgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttttaactt-agaaatgttgggtcagatcgaacatttgtaac--aatt 7856855  T
Q  306 cttaagttgagtgagtaacgccacttcaggaacatctataaaatcatttgga 357  Q
    ||||| ||||||  ||||| ||||||| || |||||||||||||||||||||    
T  7856856 cttaaattgagttcgtaacaccacttccggcacatctataaaatcatttgga 7856907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 92 - 361
Target Start/End: Original strand, 26903296 - 26903566
Alignment:
Q  92 attttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtt 190  Q
    |||||||||| ||| | |||||||||||  ||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |    
T  26903296 attttgttacgtaaatgactcttcacaatcttcatagctgaaaaaacacgttcaacacttgcagttgcaaccggcaagagcaaagccaacttcaaaagct 26903395  T
Q  191 tataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaac 290  Q
    || |||||  ||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||  ||| |||||| ||||||  |||    
T  26903396 taaaaaccaaagcaaatgtcttgcacttatttgtttccacaagtattgcacaaagatccgaaagccctttcaactttgcaaattttggatcagatttaac 26903495  T
Q  291 atttgtaacataattcttaagttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaa 361  Q
    |||| |||||||||| | ||||||  || | ||| ||||||| |  ||||||| |||||||||||||||||    
T  26903496 atttctaacataattatgaagttgtctgcgcaactccacttccgacacatctacaaaatcatttggataaa 26903566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 92 - 361
Target Start/End: Complemental strand, 36617744 - 36617474
Alignment:
Q  92 attttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtt 190  Q
    |||||||||| ||| | |||||||||||  ||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |    
T  36617744 attttgttacgtaaatgactcttcacaatcttcatagctgaaaaaacacgttcaacacttgcagttgcaaccggcaagagcaaagccaacttcaaaagct 36617645  T
Q  191 tataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaac 290  Q
    || |||||  ||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||  ||| |||||| ||||||  |||    
T  36617644 taaaaaccaaagcaaatgtcttgcacttatttgtttccacaagtattgcacaaagatccgaaagccctttcaactttgcaaattttggatcagatttaac 36617545  T
Q  291 atttgtaacataattcttaagttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaa 361  Q
    |||| |||||||||| | ||||||  || | ||| ||||||| |  ||||||| |||||||||||||||||    
T  36617544 atttctaacataattatgaagttgtctgcgcaactccacttccgacacatctacaaaatcatttggataaa 36617474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 370 - 684
Target Start/End: Original strand, 54139775 - 54140097
Alignment:
Q  370 tcttgcaattgaaattgaaactccaggtttctgcataaattgtttaaggaatttcaaaatgaatcacagtcaagtaaactagttattagctttccaattg 469  Q
    |||||| |||| |||||||||||| | |||||| |||| |||| |||||||| |||||||||||| |||||||||||||||||||||||| ||||  |||    
T  54139775 tcttgctattggaattgaaactccggctttctgaataatttgtataaggaatgtcaaaatgaatcgcagtcaagtaaactagttattagcgttccggttg 54139874  T
Q  470 aaa--ttagaatatctaccactttagct----tctagagtatgtgtttcctcaaacgtcaaattgcttacatatcttcttctctttgaaaaataaaattc 563  Q
    |    || |||||||| |||||||||||    ||||||||| ||||||||||||| ||||||||| ||| |||||| || ||    || ||||||||| |    
T  54139875 atccttttgaatatctgccactttagctagcttctagagtacgtgtttcctcaaatgtcaaattgattagatatctcctcctga--gataaataaaatcc 54139972  T
Q  564 ttattagtt----tgatctgacctctcctattcctcaacaatgcccaaggttactaaggtccggtttgaaaaggccaatataaatagcatttttcttttg 659  Q
    |||||||||    |||| || ||||| ||||||| |||||||||||||| |||||||||||||||||||||  |||||||||||||||||| ||||||||    
T  54139973 ttattagttagtttgatttggcctcttctattccccaacaatgcccaagtttactaaggtccggtttgaaattgccaatataaatagcattcttcttttg 54140072  T
Q  660 acttttgcaatgccattcgtgtcat 684  Q
    |||||||||||||||||| ||||||    
T  54140073 acttttgcaatgccattcctgtcat 54140097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 374 - 621
Target Start/End: Complemental strand, 52808236 - 52807990
Alignment:
Q  374 gcaattgaaattgaaactccaggtttctgcataaattgtttaaggaatttcaaaatgaatcacagtcaagtaaactagttattagctttccaattgaaa- 472  Q
    ||||||| || ||||||||||||||| ||||| ||||||||||||||| ||||||||||||  | ||||||||||||||||||||||||| ||||||       
T  52808236 gcaattggaaatgaaactccaggtttttgcatgaattgtttaaggaatgtcaaaatgaatcttaatcaagtaaactagttattagctttcaaattgatcc 52808137  T
Q  473 -ttagaatatctaccactttagcttctagagtatgtgtttcctcaaacgtcaaattgcttacatatcttcttctctttgaaaaataaaattcttattagt 571  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||| |  |||||||||||| | |||||||    
T  52808136 tttagaatatctaccactttagcttctagagtatgtgtttcctcaaacgtcaaattgattacatatc-tcctct-tgagaaaaataaaatccatattagt 52808039  T
Q  572 ttgatctgacctctcctattcctcaacaatgcccaaggttactaaggtcc 621  Q
    |||||||| || || |||| || ||||||||| |||| ||||||||||||    
T  52808038 ttgatctggccccttctatacc-caacaatgcgcaagtttactaaggtcc 52807990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 211 - 362
Target Start/End: Complemental strand, 7728899 - 7728748
Alignment:
Q  211 ttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaacatttgtaacataattcttaa 310  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||| ||| |||||||||||||  |||||||||||||||||||||||    
T  7728899 ttgcacttatttatttccacaagttttgcacaaagatctgaaaaccctttcaacttagcaaattttgggtcagatataacatttgtaacataattcttaa 7728800  T
Q  311 gttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaaa 362  Q
    ||||||||  |||||||||||| |  ||||||||||||||||||||||||||    
T  7728799 gttgagtgcataacgccacttccgacacatctataaaatcatttggataaaa 7728748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 133 - 313
Target Start/End: Complemental strand, 25032177 - 25031993
Alignment:
Q  133 aaaaacacgttcaacacttgcagttgctaccgc---aagagcaaagccaacttcaaaagtttataaaccctagcaaatgtgttgcacttatttgtttcca 229  Q
    |||||||||||||||||||||||||||||||||   ||||||||| ||||||||||||||| ||||||| ||  |||||||||||| |||||||||||||    
T  25032177 aaaaacacgttcaacacttgcagttgctaccgcggcaagagcaaaaccaacttcaaaagttaataaaccataataaatgtgttgcatttatttgtttcca 25032078  T
Q  230 caagt-tttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaacatttgtaacataattcttaagtt 313  Q
    ||||| |||||||||||||||||||||| || ||||||  ||| |||||| | | || |||||||||||||||||||||||||||    
T  25032077 caagtatttgcacaaagatctgaaagccgtttcaacttgccaaattttggattaaattgaacatttgtaacataattcttaagtt 25031993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 92 - 362
Target Start/End: Original strand, 36475613 - 36475886
Alignment:
Q  92 attttgttacttaatttactcttcacaactttcatggctgaaaaa-acacgttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagt 189  Q
    |||||||||| ||  |||||||| | ||||||||| ||||||||| |||| ||||||  ||||||||||||||| |||||| ||||||||||| ||| |     
T  36475613 attttgttacataggttactctttagaactttcatagctgaaaaacacacattcaaccgttgcagttgctaccgacaagagaaaagccaacttaaaaggc 36475712  T
Q  190 ttataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaa-cttttgggtcagatcga 288  Q
    || |||| | || |||||||||||||||| ||||||||||||| ||||| |||||||| ||||||||||| ||||||| |||  |||| ||||| ||  |    
T  36475713 ttctaaatcataacaaatgtgttgcacttgtttgtttccacaaattttggacaaagatttgaaagccctttcaacttagcaatttttttggtcaaattaa 36475812  T
Q  289 acatttgtaacataattcttaagttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaaa 362  Q
    |||||||||||||||||| ||||||||  | |||||||||| || || ||| || |||||||||||||||||||    
T  36475813 acatttgtaacataattcctaagttgatggtgtaacgccacatccggcacacctgtaaaatcatttggataaaa 36475886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 211 - 362
Target Start/End: Original strand, 8034854 - 8035005
Alignment:
Q  211 ttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaacatttgtaacataattcttaa 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||| ||||| || |||||||||||| | |||||||||    
T  8034854 ttgcacttatttgtttccacaagttttgcacaaagatctgaaagccctttcaacttagcaaattttaggtcacatagaacatttgtaatacaattcttaa 8034953  T
Q  311 gttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaaa 362  Q
    |||||||| || |||||||||  |  ||||||||||||||||||||||||||    
T  8034954 gttgagtgtgtgacgccactttcgacacatctataaaatcatttggataaaa 8035005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 371 - 535
Target Start/End: Original strand, 53286755 - 53286921
Alignment:
Q  371 cttgcaattgaaattgaaactccaggtttctgcataaattgtttaaggaatttcaaaatgaatcacagtcaagtaaactagttattagctttccaattga 470  Q
    ||||| |||| |||||||||||| ||||||||||||| |||| ||||||||  ||| ||||||| |||||||||||||||| ||||||||||||| ||||    
T  53286755 cttgctattggaattgaaactcctggtttctgcataagttgtataaggaatgacaagatgaatcgcagtcaagtaaactagatattagctttccagttga 53286854  T
Q  471 --aattagaatatctaccactttagcttctagagtatgtgtttcctcaaacgtcaaattgcttacat 535  Q
        |||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||    
T  53286855 tcctttagaatatctaccactttagcttctagagtatgtgtttcctcaaatgtcaaactgattacat 53286921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 107 - 362
Target Start/End: Complemental strand, 26285766 - 26285521
Alignment:
Q  107 ttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccgcaa-gagcaaagccaacttcaaaagtttataaaccctagcaa 205  Q
    |||||||||||||||||||   || ||||||||  ||||||||||| |||||||| || || |||||||| |||||||||||| ||||||||| ||  ||    
T  26285766 ttactcttcacaactttcaaatctaaaaaaacattttcaacacttgtagttgctaacggaaagagcaaagtcaacttcaaaagcttataaaccataataa 26285667  T
Q  206 atgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaacatttgtaacataatt 305  Q
    || ||||||||||||||||||||||||            ||||||||||||||| |||||||  || |||| |||||||||||| |||||||||||||||    
T  26285666 atttgttgcacttatttgtttccacaac-----------gatctgaaagccctttcaacttagtaaatttttggtcagatcgaaaatttgtaacataatt 26285578  T
Q  306 cttaagttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaaa 362  Q
     |||||||||  | ||||| ||||||| |  |||| |||||||||||||||||||||    
T  26285577 attaagttgacggcgtaacaccacttccgacacatttataaaatcatttggataaaa 26285521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 113 - 227
Target Start/End: Complemental strand, 35502465 - 35502350
Alignment:
Q  113 ttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtttataaaccctagcaaatgtgt 211  Q
    ||||||||||| || |||||||| |||  ||||||||||||| ||||||||  | ||||||||  |||||||||||| ||||||| | || |||||| ||    
T  35502465 ttcacaacttttatagctgaaaatacatattcaacacttgcaattgctacccacgagagcaaaatcaacttcaaaagcttataaatcataacaaatgggt 35502366  T
Q  212 tgcacttatttgtttc 227  Q
    ||||||||||||||||    
T  35502365 tgcacttatttgtttc 35502350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 162
Target Start/End: Complemental strand, 52308836 - 52308781
Alignment:
Q  107 ttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctac 162  Q
    |||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||    
T  52308836 ttactcttcacaacattcatagctgaaaaaatacgttcaacacttgcagttgctac 52308781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 227
Target Start/End: Original strand, 30136769 - 30136866
Alignment:
Q  128 gctgaaaaaacacgttcaacacttgcagttgcta-ccgcaagagcaaagccaacttcaaaagtttataaaccctagcaaatgtgttgcacttatttgttt 226  Q
    ||||||||||||||||||||||||||| |||||| || ||| |||||  | ||||| ||||| ||||||||| || ||||| ||||||||||||||||||    
T  30136769 gctgaaaaaacacgttcaacacttgcaattgctacccacaatagcaa--ctaactt-aaaagcttataaaccataacaaatatgttgcacttatttgttt 30136865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 227
Target Start/End: Original strand, 30142898 - 30142995
Alignment:
Q  128 gctgaaaaaacacgttcaacacttgcagttgcta-ccgcaagagcaaagccaacttcaaaagtttataaaccctagcaaatgtgttgcacttatttgttt 226  Q
    ||||||||||||||||||||||||||| |||||| || ||| |||||  | ||||| ||||| ||||||||| || ||||| ||||||||||||||||||    
T  30142898 gctgaaaaaacacgttcaacacttgcaattgctacccacaatagcaa--ctaactt-aaaagcttataaaccataacaaatatgttgcacttatttgttt 30142994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 227
Target Start/End: Original strand, 30146320 - 30146417
Alignment:
Q  128 gctgaaaaaacacgttcaacacttgcagttgcta-ccgcaagagcaaagccaacttcaaaagtttataaaccctagcaaatgtgttgcacttatttgttt 226  Q
    ||||||||||||||||||||||||||| |||||| || ||| |||||  | ||||| ||||| ||||||||| || ||||| ||||||||||||||||||    
T  30146320 gctgaaaaaacacgttcaacacttgcaattgctacccacaatagcaa--ctaactt-aaaagcttataaaccataacaaatatgttgcacttatttgttt 30146416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 41897717 - 41897777
Alignment:
Q  171 caaagccaacttcaaaagtttataaaccctagcaaatgtgttgcacttatttgtttccaca 231  Q
    |||||| ||||||||||| |||||||   ||||||||||||||||||||||||||| ||||    
T  41897717 caaagctaacttcaaaagcttataaataatagcaaatgtgttgcacttatttgttttcaca 41897777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 550 - 593
Target Start/End: Original strand, 1924485 - 1924528
Alignment:
Q  550 gaaaaataaaattcttattagtttgatctgacctctcctattcc 593  Q
    |||||||| |||||||||||||||||||||| |||| |||||||    
T  1924485 gaaaaatataattcttattagtttgatctgagctcttctattcc 1924528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 227
Target Start/End: Complemental strand, 6714092 - 6714029
Alignment:
Q  164 gcaagagcaaagccaacttcaaaagtttataaaccctagcaaatgtgttgcacttatttgtttc 227  Q
    ||||||| ||||| ||| ||||||| |||||| || || |||||||||||||| ||||||||||    
T  6714092 gcaagagtaaagctaacctcaaaagcttataagccataacaaatgtgttgcacctatttgtttc 6714029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 396 - 445
Target Start/End: Original strand, 1924243 - 1924293
Alignment:
Q  396 gtttctgcataaattgtttaagg-aatttcaaaatgaatcacagtcaagta 445  Q
    |||||||||| |||||||||||| ||| ||||||||||||||| |||||||    
T  1924243 gtttctgcatgaattgtttaaggtaatgtcaaaatgaatcacaatcaagta 1924293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 172; Significance: 5e-92; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 92 - 362
Target Start/End: Original strand, 36745085 - 36745356
Alignment:
Q  92 attttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtt 190  Q
    |||||||||| ||  ||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||    
T  36745085 attttgttacatatgttactcttcacaactttcatatctgaaaaaacacgttcaacacttgcagttgttaccgacaagagcaaagtcaacttcaaaagtt 36745184  T
Q  191 tataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaac 290  Q
    |||||||| || |||||||||||||||||| ||||| || || |||||||||||||||||||||||||| ||||||| |||  |||||||||||||||||    
T  36745185 tataaaccatatcaaatgtgttgcacttatatgttttcataatttttgcacaaagatctgaaagccctttcaacttagcaaactttgggtcagatcgaac 36745284  T
Q  291 atttgtaacataattcttaagttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaaa 362  Q
    |||||||||||||||||||||||||||| ||||||||||||     ||||||||||||||||||||||||||    
T  36745285 atttgtaacataattcttaagttgagtgcgtaacgccactttcaacacatctataaaatcatttggataaaa 36745356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 92 - 361
Target Start/End: Original strand, 43144709 - 43144979
Alignment:
Q  92 attttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtt 190  Q
    |||||||||| ||  |||||||| ||| ||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  43144709 attttgttacataggttactctttacacctttcatagctgaaaaaatacgttcaacacttgcagttgctaccggcaagagcaaagtcaacttcaaaagtt 43144808  T
Q  191 tataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaac 290  Q
    |||||||| ||||||||||||| || ||||||||||||||||||||||||||||||| ||||| | ||| ||||||| ||| |||| |||||||||||||    
T  43144809 tataaaccatagcaaatgtgttacatttatttgtttccacaagttttgcacaaagatttgaaaactctttcaacttagcaaattttcggtcagatcgaac 43144908  T
Q  291 atttgtaacataattcttaagttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaa 361  Q
    |||||||| ||||||||||||||||    |||| | ||||||    |||||||| ||||||||||||||||    
T  43144909 atttgtaatataattcttaagttgatgttgtaatgtcacttccaacacatctatgaaatcatttggataaa 43144979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 130 - 369
Target Start/End: Complemental strand, 36633912 - 36633672
Alignment:
Q  130 tgaaaaaacacgttcaacacttgcagttgctacc-gcaagagcaaagccaacttcaaaagtttataaaccctagcaaatgtgttgcacttatttgtttcc 228  Q
    |||||||||| ||||||||||||||||||||||| |||| ||||||| |  ||||||||||| ||||||| |||||||||||||||| ||||||||||||    
T  36633912 tgaaaaaacatgttcaacacttgcagttgctaccagcaaaagcaaagtctgcttcaaaagttaataaaccatagcaaatgtgttgcatttatttgtttcc 36633813  T
Q  229 acaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaacatttgtaacataattcttaagttgagtgagtaacgcca 328  Q
    |||| |||||||||||||| ||||||    | | ||||| ||| |||||| ||| |||||| |||||||||| |||||||||||| |  | |||||||||    
T  36633812 acaaattttgcacaaagatgtgaaagtagattcgacttagcaaattttggatcaaatcgaatatttgtaacacaattcttaagttaatggcgtaacgcca 36633713  T
Q  329 cttcaggaacatctataaaatcatttggataaaatttagtc 369  Q
    |||| || |||||||| ||||||||||||||||| ||||||    
T  36633712 cttccggcacatctattaaatcatttggataaaacttagtc 36633672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 92 - 314
Target Start/End: Complemental strand, 17076579 - 17076356
Alignment:
Q  92 attttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtt 190  Q
    |||||||||| ||| | |||||||| ||  ||||| ||| ||||||||||||||||||||||| || | |||| |||||| ||||||||| ||||||| |    
T  17076579 attttgttacgtaaatgactcttcagaatcttcatagctaaaaaaacacgttcaacacttgcaattacaaccgacaagagtaaagccaacatcaaaagct 17076480  T
Q  191 tataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaac 290  Q
    ||||||||  ||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||| | | |||||| ||||||  |||    
T  17076479 tataaaccaaagcaaatgtcttgcacttatttgtttccacaagtattgcacaaagatccgaaagccctttcaacttagcgaattttggatcagatttaac 17076380  T
Q  291 atttgtaacataattcttaagttg 314  Q
    |||  |||||||||||| ||||||    
T  17076379 attcctaacataattctgaagttg 17076356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 108 - 315
Target Start/End: Original strand, 25819240 - 25819447
Alignment:
Q  108 tactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctacc-gcaagagcaaagccaacttcaaaagtttataaaccctagcaaa 206  Q
    |||| ||||||||||| || | |||||||||| |||| |||||||||||||||| | ||||||||||| |||| || ||||| | ||||| | |||||||    
T  25819240 tactattcacaactttaatagttgaaaaaacatgttcgacacttgcagttgctatcagcaagagcaaaaccaatttaaaaagct-ataaatcatagcaaa 25819338  T
Q  207 tgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaacatttgtaacataattc 306  Q
    ||| ||||| ||||||||||||||||||||||||||||||| || |  |||||  |||||| ||| |||||| ||||||  |||||||  ||||| |||     
T  25819339 tgtattgcagttatttgtttccacaagttttgcacaaagatttggattcccttttaacttagcaaattttggatcagatttaacatttacaacattattt 25819438  T
Q  307 ttaagttga 315  Q
     ||||||||    
T  25819439 ctaagttga 25819447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 132 - 227
Target Start/End: Original strand, 39509268 - 39509364
Alignment:
Q  132 aaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtttataaaccctagcaaatgtgttgcacttatttgtttc 227  Q
    |||||||| |||||||||||| | ||| ||||  |||| ||||||||||||||||||||||||||| | || ||||| |||||||||||||| ||||    
T  39509268 aaaaaacaagttcaacacttgtaattgttacccacaagggcaaagccaacttcaaaagtttataaatcgtaacaaatatgttgcacttatttatttc 39509364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 113 - 227
Target Start/End: Original strand, 5569121 - 5569242
Alignment:
Q  113 ttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgcta-------ccgcaagagcaaagccaacttcaaaagtttataaaccctagcaa 205  Q
    |||||||||||  | |||||||| |||| ||||||||||||| ||||||       || ||||||||||| |||||||||||| | ||||| | || |||    
T  5569121 ttcacaacttttgtagctgaaaatacacattcaacacttgcaattgctattgctacccacaagagcaaagtcaacttcaaaagctaataaatcataacaa 5569220  T
Q  206 atgtgttgcacttatttgtttc 227  Q
    ||||||||||||||||| ||||    
T  5569221 atgtgttgcacttatttatttc 5569242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 196
Target Start/End: Complemental strand, 30078202 - 30078095
Alignment:
Q  92 attttgttacttaatttactcttcacaac---tttcatggctgaaaaaacacgttcaacacttgcagttgctacc-gcaagagcaaagccaacttcaaaa 187  Q
    |||||||||| ||||| ||||||||||||   |||||  | |||||||||| |||||||||||| |||||||||| |||||||||||  |||||| ||||    
T  30078202 attttgttacataatt-actcttcacaacaattttcaatgttgaaaaaacatgttcaacacttgaagttgctaccggcaagagcaaaatcaactttaaaa 30078104  T
Q  188 gtttataaa 196  Q
    | |||||||    
T  30078103 gcttataaa 30078095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 243
Target Start/End: Complemental strand, 11498262 - 11498187
Alignment:
Q  169 agcaaagccaacttcaaaagtttataaaccctagcaaatgtgttgcacttatt-tgtttccacaagttttgcacaa 243  Q
    |||||||| ||||||||||| ||||||| | || ||||||  ||||||||||| |||||||||||||| |||||||    
T  11498262 agcaaagcaaacttcaaaagcttataaatcatatcaaatgcattgcacttattatgtttccacaagttatgcacaa 11498187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 243
Target Start/End: Complemental strand, 11505618 - 11505543
Alignment:
Q  169 agcaaagccaacttcaaaagtttataaaccctagcaaatgtgttgcacttatt-tgtttccacaagttttgcacaa 243  Q
    |||||||| ||||||||||| ||||||| | || ||||||  ||||||||||| |||||||||||||| |||||||    
T  11505618 agcaaagcaaacttcaaaagcttataaatcatatcaaatgcattgcacttattatgtttccacaagttatgcacaa 11505543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 243
Target Start/End: Complemental strand, 11513012 - 11512937
Alignment:
Q  169 agcaaagccaacttcaaaagtttataaaccctagcaaatgtgttgcacttatt-tgtttccacaagttttgcacaa 243  Q
    |||||||| ||||||||||| ||||||| | || ||||||  ||||||||||| |||||||||||||| |||||||    
T  11513012 agcaaagcaaacttcaaaagcttataaatcatatcaaatgcattgcacttattatgtttccacaagttatgcacaa 11512937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 243
Target Start/End: Complemental strand, 11520388 - 11520313
Alignment:
Q  169 agcaaagccaacttcaaaagtttataaaccctagcaaatgtgttgcacttatt-tgtttccacaagttttgcacaa 243  Q
    |||||||| ||||||||||| ||||||| | || ||||||  ||||||||||| |||||||||||||| |||||||    
T  11520388 agcaaagcaaacttcaaaagcttataaatcatatcaaatgcattgcacttattatgtttccacaagttatgcacaa 11520313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 243
Target Start/End: Complemental strand, 11527796 - 11527721
Alignment:
Q  169 agcaaagccaacttcaaaagtttataaaccctagcaaatgtgttgcacttatt-tgtttccacaagttttgcacaa 243  Q
    |||||||| ||||||||||| ||||||| | || ||||||  ||||||||||| |||||||||||||| |||||||    
T  11527796 agcaaagcaaacttcaaaagcttataaatcatatcaaatgcattgcacttattatgtttccacaagttatgcacaa 11527721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 85 - 152
Target Start/End: Complemental strand, 34751044 - 34750977
Alignment:
Q  85 atcatcgattttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttg 152  Q
    |||||| |||||||||| |   |||||||||||||||||||| |||| ||| ||||||||||||||||    
T  34751044 atcatccattttgttacatgggttactcttcacaactttcatagctgtaaagacacgttcaacacttg 34750977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 152
Target Start/End: Original strand, 5070012 - 5070057
Alignment:
Q  107 ttactcttcacaactttcatggctgaaaaaacacgttcaacacttg 152  Q
    ||||||||  |||||||||| |||||||||||||||||||||||||    
T  5070012 ttactcttatcaactttcatagctgaaaaaacacgttcaacacttg 5070057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 171; Significance: 2e-91; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 108 - 361
Target Start/End: Complemental strand, 33941581 - 33941327
Alignment:
Q  108 tactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtttataaaccctagcaaa 206  Q
    ||||||||||||||||||| | ||||||||||||||||||  ||||||||||||||| |||||||||| |||||||||||||||||||| || |||||||    
T  33941581 tactcttcacaactttcatagatgaaaaaacacgttcaacgattgcagttgctaccggcaagagcaaatccaacttcaaaagtttataatccatagcaaa 33941482  T
Q  207 tgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaacatttgtaacataattc 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||| |||||||||||    
T  33941481 tgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagccctttcaacttagcaaattttgggtcagatcgaacatttataacataattc 33941382  T
Q  307 ttaagttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaa 361  Q
    |||||||||    |||||||||||||  | |||||||||||||||||||| ||||    
T  33941381 ttaagttgacgatgtaacgccacttccagcacatctataaaatcatttgggtaaa 33941327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 85 - 362
Target Start/End: Complemental strand, 2945362 - 2945083
Alignment:
Q  85 atcatcgattttgttacttaatttactcttcacaactttcatggctgaaaaaa-cacgttcaacacttgcagttgctaccg-caagagcaaagccaactt 182  Q
    |||||| |||||||||  ||  ||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||    
T  2945362 atcatccattttgttatgtaggttactcttcacaactttcatatctgaaaaaaacacgttcaacacttgcagttgctaccgacaagagcaaagtcaactt 2945263  T
Q  183 caaaagtttataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtca 282  Q
    |||||||||||||| | |||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||| ||||||| ||| |||| |||||    
T  2945262 caaaagtttataaatcatagcaaatgtgttgcatttatttgcttccacaagttttgtacaaagatctgaaagccctttcaacttagcaaattttcggtca 2945163  T
Q  283 gatcgaacatttgtaacataattcttaagttgagtga-gtaacgccacttcaggaacatctataaaatcatttggataaaa 362  Q
    |||||||||||||||| |||||||||||||||| ||| |||||| |||||| |  ||||||||||||||||||||||||||    
T  2945162 gatcgaacatttgtaatataattcttaagttga-tgacgtaacgtcacttccgacacatctataaaatcatttggataaaa 2945083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 92 - 355
Target Start/End: Original strand, 1691793 - 1692062
Alignment:
Q  92 attttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaaca--cttgcagttgctaccg-caagagcaaagccaacttcaaaag 188  Q
    |||||||||| ||  ||||||||||||||||| || |||||||||||||||||||||  |||||||||||||  | || ||||||| |||||||||||||    
T  1691793 attttgttacatatgttactcttcacaacttttatagctgaaaaaacacgttcaacatacttgcagttgctattggcatgagcaaaaccaacttcaaaag 1691892  T
Q  189 tttataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaac---ttaacaacttttgggtcagat 285  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||   ||| ||| || ||||||||||    
T  1691893 tttataaaccatagcaaatgtgttgcacttatttgtttccataagttttgcacaaagatctgaaagtcctttcaactaattagcaaattatgggtcagat 1691992  T
Q  286 cgaacatttgtaacataattcttaagttgagtgagtaacgccacttcaggaacatctataaaatcatttg 355  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| || ||||| ||| ||| |||||    
T  1691993 cgaacatttgtaacataattcttaagttgagtgcgtaacgccacttctggcacatccatacaattatttg 1692062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 85 - 303
Target Start/End: Original strand, 24658561 - 24658780
Alignment:
Q  85 atcatcgattttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttc 183  Q
    |||||| |||||||||| ||  |||||||| ||||  ||||| ||||||||||||||||||||||||||||||| || || |||||||||| ||||||||    
T  24658561 atcatccattttgttacataggttactctttacaatcttcatagctgaaaaaacacgttcaacacttgcagttgttatcggcaagagcaaaaccaacttc 24658660  T
Q  184 aaaagtttataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcag 283  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||| |||| ||| |     
T  24658661 aaaagtttataaatcatagcaaatgtgttgcacttatttgtttccacaagttttgtgcaaagatctgaaagccctttcaacttaacaaattttcggttaa 24658760  T
Q  284 atcgaacatttgtaacataa 303  Q
    || |||||||||||||||||    
T  24658761 attgaacatttgtaacataa 24658780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 92 - 361
Target Start/End: Complemental strand, 43265901 - 43265631
Alignment:
Q  92 attttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtt 190  Q
    |||||||||| ||| | |||||||||||  ||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |    
T  43265901 attttgttacgtaaatgactcttcacaatcttcatagctgaaaaaacacgttcaacacttgcagttgcaaccggcaagagcaaagccaacttcaaaagct 43265802  T
Q  191 tataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaac 290  Q
    || |||||  ||||| ||| |||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||  ||| |||||| ||||||  |||    
T  43265801 taaaaaccaaagcaagtgtcttgcacttatttgtttccacaagtattgcacaaagatccgaaagccctttcaactttgcaaattttggatcagatttaac 43265702  T
Q  291 atttgtaacataattcttaagttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaa 361  Q
    |||| |||||||||| | ||||||  || | ||| ||||||| |  ||||||| |||||||||||||||||    
T  43265701 atttctaacataattttgaagttgtctgcgcaactccacttccgacacatctacaaaatcatttggataaa 43265631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 92 - 360
Target Start/End: Complemental strand, 30074588 - 30074330
Alignment:
Q  92 attttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtt 190  Q
    |||||||||| ||  ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||        
T  30074588 attttgttacataggttactcttcacaactttcatatctgaaaaaacacgttcaacacttgcagttgctaccgacaagagcaaatc-aacttcaaa---- 30074494  T
Q  191 tataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaac 290  Q
          || |||||||||||||||| ||||||||||||| ||||||| ||||||||| ||||||||||| ||||||| ||| |||| | |||||||||||    
T  30074493 ------ccatagcaaatgtgttgcatttatttgtttccaaaagttttacacaaagatttgaaagccctttcaacttagcaaattttcgttcagatcgaac 30074400  T
Q  291 atttgtaacataattcttaagttgagtgagtaacgccacttcaggaacatctataaaatcatttggataa 360  Q
    |||||||| ||||||||||||||||  | |||||||||||||    ||||||||||||| ||||||||||    
T  30074399 atttgtaatataattcttaagttgatggtgtaacgccacttccaacacatctataaaattatttggataa 30074330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 38300341 - 38300188
Alignment:
Q  85 atcatcgattttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttc 183  Q
    |||||| ||||||||||||||||||||||| ||||||||||| | |||||||| |||||||||||||||| ||||||||| ||||||||||| |||||||    
T  38300341 atcatccattttgttacttaatttactctttacaactttcatagatgaaaaaa-acgttcaacacttgcaattgctaccggcaagagcaaagtcaacttc 38300243  T
Q  184 aaaagtttataaaccctagcaaatgtgttgcacttatttgtttccacaagttttg 238  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  38300242 aaaagtttataaaccatagcaaatgtgttgcacttatttgtttccacaagttttg 38300188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 234 - 361
Target Start/End: Complemental strand, 38293632 - 38293505
Alignment:
Q  234 ttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaacatttgtaacataattcttaagttgagtgagtaacgccacttca 333  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||     
T  38293632 ttttgcacaaaaatctgaaagcccttacaacttaacaacttttgggtcagattgaacatttgtaacataattcttaagttgagtgcgtaacgccacttcc 38293533  T
Q  334 ggaacatctataaaatcatttggataaa 361  Q
    |||||||||||||||| |||||||||||    
T  38293532 ggaacatctataaaattatttggataaa 38293505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 211 - 362
Target Start/End: Original strand, 10702820 - 10702971
Alignment:
Q  211 ttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaacatttgtaacataattcttaa 310  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  10702820 ttgcacttatttgtttccacaagttttgcacaaagatctgaaagccttttcaacttagcaaattttgggtcagatagaacatttgtaacataattcttaa 10702919  T
Q  311 gttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaaa 362  Q
    ||| |||| ||||||| |||||  | ||||||| ||||||||||||||||||    
T  10702920 gttcagtgtgtaacgcaacttccagcacatctagaaaatcatttggataaaa 10702971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 83 - 361
Target Start/End: Complemental strand, 46090159 - 46089882
Alignment:
Q  83 taatcatcgattttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaact 181  Q
    |||||||| | |||||||| || |  |||||||||||||||||| | |||||||||||||||||||||| | |||||||| | ||||||||||||| |||    
T  46090159 taatcatccactttgttacatagtagactcttcacaactttcatagttgaaaaaacacgttcaacactt-cggttgctactggcaagagcaaagccgact 46090061  T
Q  182 tcaaaagtttataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtc 281  Q
    || |||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||| ||||||| ||| |||  ||||    
T  46090060 tccaaagcttataaaccatagcaaatgtgttgcacttatttgttttcacaagttttgcacaaa-atctgaaagtcctttcaacttagcaaatttcaggtc 46089962  T
Q  282 agatcgaacatttgtaacataattcttaagttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaa 361  Q
    |  | ||||| || | ||||||||| ||||||||  |  |||||||||||| |  | | ||||||||| |||||| ||||    
T  46089961 aagttgaacaattattacataattcctaagttgatggcataacgccacttccgacataactataaaattatttgggtaaa 46089882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 132 - 259
Target Start/End: Original strand, 8256734 - 8256862
Alignment:
Q  132 aaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtttataaaccctagcaaatgtgttgcacttatttgtttccac 230  Q
    |||||||| |||||||||||||||||| ||||| ||||||||||  |||||||||||| ||||||||  ||||||||||| ||||||||||| |||||||    
T  8256734 aaaaaacatgttcaacacttgcagttgttaccggcaagagcaaaatcaacttcaaaagcttataaacaatagcaaatgtgctgcacttatttatttccac 8256833  T
Q  231 aagttttgcacaaagatctgaaagccctt 259  Q
    ||||||||||||||||||||||| |||||    
T  8256834 aagttttgcacaaagatctgaaacccctt 8256862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 93 - 227
Target Start/End: Original strand, 25233095 - 25233230
Alignment:
Q  93 ttttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagttt 191  Q
    ||||||||| || || ||| |||||||||||  | ||||||||||||||||||||||||||| ||||||||  ||||||||||||||| |||||||| ||    
T  25233095 ttttgttacatagttaactgttcacaacttttgtagctgaaaaaacacgttcaacacttgcacttgctacccacaagagcaaagccaatttcaaaagctt 25233194  T
Q  192 ataaaccctagcaaatgtgttgcacttatttgtttc 227  Q
    ||||| | || |||||||||||||||||||||||||    
T  25233195 ataaatcataacaaatgtgttgcacttatttgtttc 25233230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 109 - 243
Target Start/End: Original strand, 27080575 - 27080710
Alignment:
Q  109 actcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtttataaaccctagcaaat 207  Q
    ||||||||  |||||||| ||| |||||| | |||||||||||||||||||||||| ||| ||  |||||||||||||||  ||||||| | ||||||||    
T  27080575 actcttcatgactttcatagcttaaaaaatatgttcaacacttgcagttgctaccgacaaaagagaagccaacttcaaaaacttataaatcatagcaaat 27080674  T
Q  208 gtgttgcacttatttgtttccacaagttttgcacaa 243  Q
    |||||||||||||||||||||||||||||| |||||    
T  27080675 gtgttgcacttatttgtttccacaagttttacacaa 27080710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 109 - 243
Target Start/End: Complemental strand, 27197726 - 27197591
Alignment:
Q  109 actcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtttataaaccctagcaaat 207  Q
    ||||||||  |||||||| ||| |||||| | |||||||||||||||||||||||| ||| ||  |||||||||||||||  ||||||| | ||||||||    
T  27197726 actcttcatgactttcatagcttaaaaaatatgttcaacacttgcagttgctaccgacaaaagagaagccaacttcaaaaacttataaatcatagcaaat 27197627  T
Q  208 gtgttgcacttatttgtttccacaagttttgcacaa 243  Q
    |||||||||||||||||||||||||||||| |||||    
T  27197626 gtgttgcacttatttgtttccacaagttttacacaa 27197591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 209 - 362
Target Start/End: Complemental strand, 32221856 - 32221704
Alignment:
Q  209 tgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaacatttgtaacataattctt 308  Q
    ||||||| || |||||||||||||||||| ||||| ||||||||||||||| ||||||| ||| |||| ||||||||||||||  ||||| |||||| ||    
T  32221856 tgttgcatttgtttgtttccacaagttttacacaaggatctgaaagccctttcaacttagcaatttttcggtcagatcgaaca-ctgtaatataattttt 32221758  T
Q  309 aagttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaaa 362  Q
    |||||||  | ||||||||||||| |  ||| |||||||||||||| |||||||    
T  32221757 aagttgatggtgtaacgccacttccgacacaactataaaatcatttcgataaaa 32221704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 249 - 362
Target Start/End: Original strand, 24039500 - 24039613
Alignment:
Q  249 tgaaagcccttacaacttaacaacttttgggtcagatcgaacatttgtaacataattcttaagttgagtgagtaacgccacttcaggaacatctataaaa 348  Q
    ||||||||||| ||||||| ||| |||||||| |||| ||| |||||||||||||||||||||||||||| ||||  ||||||  || ||||||||||||    
T  24039500 tgaaagccctttcaacttagcaaattttgggttagatagaatatttgtaacataattcttaagttgagtgtgtaataccactttcggcacatctataaaa 24039599  T
Q  349 tcatttggataaaa 362  Q
    ||||||||||||||    
T  24039600 tcatttggataaaa 24039613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 96 - 223
Target Start/End: Original strand, 39785648 - 39785776
Alignment:
Q  96 tgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctacc-gcaagagcaaagccaacttcaaaagtttata 194  Q
    |||||| || || |||||||||||| || || ||||||||||||| ||||||||||||||||||||||  |||||||||| ||||||||||||  |||||    
T  39785648 tgttacatagttgactcttcacaaccttgatagctgaaaaaacacattcaacacttgcagttgctaccaacaagagcaaaaccaacttcaaaaacttata 39785747  T
Q  195 aaccctagcaaatgtgttgcacttatttg 223  Q
     |||  |||||||||||| || |||||||    
T  39785748 caccaaagcaaatgtgttacaattatttg 39785776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 172 - 243
Target Start/End: Complemental strand, 1247910 - 1247839
Alignment:
Q  172 aaagccaacttcaaaagtttataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaa 243  Q
    |||| |||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  1247910 aaagtcaacttcaaaagcttataaatcatagcaaatgtgttgcacttatttgtttccacaagttttgcacaa 1247839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 169 - 239
Target Start/End: Original strand, 8062569 - 8062639
Alignment:
Q  169 agcaaagccaacttcaaaagtttataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgc 239  Q
    ||||||||||| |||||||  ||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  8062569 agcaaagccaatttcaaaaacttataaatcatagcaaatgtgttgcacttatttgtttccacaagttttgc 8062639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 38838337 - 38838411
Alignment:
Q  169 agcaaagccaacttcaaaagtttataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaa 243  Q
    |||||||| ||||||||||| ||||||| | | ||||||||||||| ||||||||||| || |||||||||||||    
T  38838337 agcaaagctaacttcaaaagcttataaatcattgcaaatgtgttgcgcttatttgttttcataagttttgcacaa 38838411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 25617858 - 25617957
Alignment:
Q  145 aacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtttataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaa 243  Q
    |||||||||| ||||||||| |||   ||||  |||||||||||| ||||||| | ||||||||||||| || ||||||||||| |||| ||||||||||    
T  25617858 aacacttgcacttgctaccgacaaatacaaaatcaacttcaaaagcttataaatcatagcaaatgtgttacatttatttgtttcaacaaattttgcacaa 25617957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 92 - 227
Target Start/End: Original strand, 26787423 - 26787560
Alignment:
Q  92 attttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccgc-aagagcaaagccaacttcaaaa-gt 189  Q
    |||||||||| ||||| | | |||||||||||  | | ||| |||||| ||| |||||||||| ||| |||||  || ||||||  ||||||||||| ||    
T  26787423 attttgttacataattgattgttcacaacttttgtagatgacaaaacatgtttaacacttgcaattgataccgataaaagcaaaatcaacttcaaaaagt 26787522  T
Q  190 ttataaaccctagcaaatgtgttgcacttatttgtttc 227  Q
    ||||||||| || ||||| ||||||||||| |||||||    
T  26787523 ttataaaccataacaaatatgttgcacttacttgtttc 26787560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 227
Target Start/End: Original strand, 33598005 - 33598101
Alignment:
Q  132 aaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtttataaaccctagcaaatgtgttgcacttatttgtttc 227  Q
    ||||||||  ||||||  ||||| ||||||||  ||||||||||||||| || ||||| ||||||| | || ||||||||||||||||| |||||||    
T  33598005 aaaaaacatattcaactattgcaattgctacccacaagagcaaagccaaatttaaaagcttataaatcataacaaatgtgttgcacttaattgtttc 33598101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 169; Significance: 3e-90; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 92 - 362
Target Start/End: Original strand, 4377427 - 4377699
Alignment:
Q  92 attttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtt 190  Q
    |||||||||| ||  ||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||    
T  4377427 attttgttacataggttactcttcacaactttcatatctgaaaaaacacgttcaacacttgcaattgctaccggcaagagcaaagtcaacttcaaaagtt 4377526  T
Q  191 tataaaccc-tagcaaatgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaa 289  Q
    ||||||  | |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||  ||| |||||||||||||||||    
T  4377527 tataaaatcatagcaaatgtgttgcacttatttgtttccacaagtcatgcacaaagatctgaaagccctttcaacttggcaaattttgggtcagatcgaa 4377626  T
Q  290 catttgtaacataattcttaagttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaaa 362  Q
    ||| ||||||||||||||||||||||||| ||| ||||||||  || ||||||||||||| ||||||||||||    
T  4377627 catctgtaacataattcttaagttgagtgcgtatcgccactttcggcacatctataaaattatttggataaaa 4377699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 85 - 362
Target Start/End: Original strand, 36248011 - 36248289
Alignment:
Q  85 atcatcgattttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttc 183  Q
    |||||| |||||||||  ||  |||||||||||| |||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  36248011 atcatccattttgttaaataggttactcttcacacctttcatatctgaaaaaacacgttcaacacttgcagttgctaccggcaagagcaaagccaacttc 36248110  T
Q  184 aaaagtttataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcag 283  Q
    ||||||||||||| | || |||| |||||||||||||||||||||||||||||| ||||||| ||| ||| | ||| ||||||||||| |||| ||||||    
T  36248111 aaaagtttataaatcataacaaaagtgttgcacttatttgtttccacaagttttacacaaaggtctaaaaactctttcaacttaacaaattttaggtcag 36248210  T
Q  284 atcgaacatttgtaacataattcttaagttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaaa 362  Q
    ||||||||| |||||||||| ||||||||| |||| ||||| |||| |  || ||||||||||||||||||||||||||    
T  36248211 atcgaacatctgtaacataactcttaagttaagtgcgtaacaccaccttcggcacatctataaaatcatttggataaaa 36248289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 92 - 362
Target Start/End: Original strand, 33518221 - 33518491
Alignment:
Q  92 attttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtt 190  Q
    |||||||||| ||  ||||||||||||||||||||  | |||||||||||| |||||||| ||||||| |||| |||||| ||||||||||| |||||||    
T  33518221 attttgttacataggttactcttcacaactttcatatccgaaaaaacacgtacaacacttacagttgccaccggcaagagtaaagccaactttaaaagtt 33518320  T
Q  191 tataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaac 290  Q
    ||||||||    ||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||  |||||| ||| ||||||||||||||||||    
T  33518321 tataaaccacgacaaatgtgttgcacttatttgtttccacaagatttgcacaaatatctaaaagcccttttaacttagcaaattttgggtcagatcgaac 33518420  T
Q  291 atttgtaacataattcttaagttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaaa 362  Q
    | |||||||||||||||||| ||||||| ||||||||||||   | ||||||||||||||||||||||||||    
T  33518421 a-ttgtaacataattcttaaattgagtgtgtaacgccactttcagcacatctataaaatcatttggataaaa 33518491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 108 - 292
Target Start/End: Original strand, 2815733 - 2815920
Alignment:
Q  108 tactcttcacaactttcatggctgaaaaaacac--gttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtttataaaccctagca 204  Q
    |||||||||||||||| || |||||||||||||  |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||    
T  2815733 tactcttcacaactttaatagctgaaaaaacacacgttcaacacttgcagttgctaccggcaagagcaaagccaacttgaaaagtttataaaccatagca 2815832  T
Q  205 aatgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaacat 292  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||    
T  2815833 aatgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagccctttcaacttagcaaattttgggtcagatcgaacat 2815920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 370 - 685
Target Start/End: Complemental strand, 48431920 - 48431609
Alignment:
Q  370 tcttgcaattgaaattgaaactccaggtttctgcataaattgtttaaggaatttcaaaatgaatcacagtcaagtaaactagttattagctttccaattg 469  Q
    ||||||||||| ||||| |||||||||||||||||| ||||||| ||||||| |||||||||||||||  ||||||||||||||||||||||| ||| ||    
T  48431920 tcttgcaattggaattggaactccaggtttctgcatgaattgttaaaggaatgtcaaaatgaatcacaaccaagtaaactagttattagcttttcaactg 48431821  T
Q  470 a--aattagaatatctaccactttagcttctagagtatgtgtttcctcaaacgtcaaattgcttacatatcttcttctctttgaaaaataaaattcttat 567  Q
    |    ||||||| ||||||| ||||||||||||||||||| ||||||    |  || |||| ||||||||| || ||| |  |||||||||||| |||||    
T  48431820 atcctttagaatttctaccagtttagcttctagagtatgtctttcct---tctacagattggttacatatc-tcctct-taagaaaaataaaatccttat 48431726  T
Q  568 tagtttgatctgacctctcctattcctcaacaatgcccaaggttactaaggtcc--ggtttgaaaaggccaatataaatagcatttttcttttgactttt 665  Q
    ||||||||||||  ||||  ||| || |||||||||||||| ||||||||||||  |||||| ||| ||  |||||||||||| ||||| |||||| |||    
T  48431725 tagtttgatctggtctcttttatacc-caacaatgcccaagtttactaaggtccttggtttg-aaatgctgatataaatagca-ttttcgtttgacgttt 48431629  T
Q  666 gcaatgccattcgtgtcatc 685  Q
    |||||||||||| |||||||    
T  48431628 gcaatgccattcctgtcatc 48431609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 130 - 362
Target Start/End: Complemental strand, 50723224 - 50723002
Alignment:
Q  130 tgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtttataaaccctagcaaatgtgttgcacttatttgtttcc 228  Q
    ||||||||||| ||||||||||||||||||||||| |||||| |||| |||||||||||||| |||||||  ||||||||||||||| |||||||         
T  50723224 tgaaaaaacacattcaacacttgcagttgctaccggcaagagtaaagtcaacttcaaaagttaataaaccacagcaaatgtgttgcatttatttg----- 50723130  T
Q  229 acaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaacatttgtaacataattcttaagttgagtgagtaacgcca 328  Q
          ||| ||||||||||| |||| |||| ||||||| ||| |||||||||| || |||||||||||||||||| ||||||||||  | ||| | |||    
T  50723129 ------ttttcacaaagatcttaaagtcctttcaacttagcaaattttgggtcaaattgaacatttgtaacataatacttaagttgatggcgtagcacca 50723036  T
Q  329 cttcaggaacatctataaaatcatttggataaaa 362  Q
    ||||  | |||| ||| |||||||||||||||||    
T  50723035 cttccagcacatttattaaatcatttggataaaa 50723002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 92 - 226
Target Start/End: Original strand, 2158776 - 2158911
Alignment:
Q  92 attttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtt 190  Q
    |||||||||| ||  |||||||||||||||||||| | ||||||||||| |||||||||| || ||||||||| |||||||||| ||||||||||||| |    
T  2158776 attttgttacataggttactcttcacaactttcatagttgaaaaaacacattcaacacttacacttgctaccggcaagagcaaaaccaacttcaaaagct 2158875  T
Q  191 tataaaccctagcaaatgtgttgcacttatttgttt 226  Q
    || ||||| |||||||||||||||||||||||||||    
T  2158876 tacaaaccatagcaaatgtgttgcacttatttgttt 2158911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 200 - 362
Target Start/End: Original strand, 5882679 - 5882841
Alignment:
Q  200 tagcaaatgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaacatttgtaac 299  Q
    |||||||||||||||| ||||||||||||| | | ||||||||||||| ||||||||| | ||||||| ||| |||| ||||||||| ||||||| |||     
T  5882679 tagcaaatgtgttgcatttatttgtttccaaatgatttgcacaaagatatgaaagcccattcaacttagcaaattttcggtcagatcaaacatttttaat 5882778  T
Q  300 ataattcttaagttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaaa 362  Q
    ||||||||||||||||  | |||||| |||||| |  |||||||| |||| ||||||||||||    
T  5882779 ataattcttaagttgatggcgtaacgacacttccgacacatctatcaaattatttggataaaa 5882841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 212 - 318
Target Start/End: Original strand, 2185307 - 2185413
Alignment:
Q  212 tgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaacatttgtaacataattcttaag 311  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| | || ||||||| ||| |||| |||||||| |||||||||||||||| ||||||||    
T  2185307 tgcacttatttgttttcacaagttttgtacaaagatctgaaagtcttttcaacttaccaaattttaggtcagatagaacatttgtaacatagttcttaag 2185406  T
Q  312 ttgagtg 318  Q
    |||||||    
T  2185407 ttgagtg 2185413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 145 - 362
Target Start/End: Original strand, 24153718 - 24153925
Alignment:
Q  145 aacacttgcagttgctaccgc-aagagcaaagccaacttcaaaagtttataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaa 243  Q
    |||| ||| |||||||||||| |||||||||| |||||||| | | ||||||||  ||| |||||||||||||||||||||||||| ||               
T  24153718 aacatttgtagttgctaccgccaagagcaaagtcaacttcacatgcttataaactatagtaaatgtgttgcacttatttgtttccataa----------- 24153806  T
Q  244 agatctgaaagcccttacaacttaacaacttttgggtcagatcgaacatttgtaacataattcttaagttgagtgagtaacgccacttcaggaacatcta 343  Q
    |||| || |||||||| ||||||  ||| |||||| |||||| |||||||| || |||||||| ||||||||  | ||||||||||||| || |||| ||    
T  24153807 agatttggaagccctttcaactttgcaaattttggatcagattgaacatttttagcataattcataagttgatggtgtaacgccacttccggcacattta 24153906  T
Q  344 taaaatcatttggataaaa 362  Q
    |||||| ||||||||||||    
T  24153907 taaaattatttggataaaa 24153925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 85 - 227
Target Start/End: Original strand, 1112138 - 1112280
Alignment:
Q  85 atcatcgattttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttc 183  Q
    |||||| |||||||||| || ||  ||||||||||||||||| | ||||||  |||||||||| ||||| |||||| | | ||| |||||||||||||||    
T  1112138 atcatccattttgttacatagttggctcttcacaactttcatagttgaaaag-cacgttcaacgcttgccgttgctgctgacaaaagcaaagccaacttc 1112236  T
Q  184 aaaagtttataaaccctagcaaatgtgttgcacttatttgtttc 227  Q
    ||||  ||||||||| |  ||||||||||||||||| |||||||    
T  1112237 aaaaacttataaaccatcacaaatgtgttgcacttaattgtttc 1112280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 274 - 362
Target Start/End: Original strand, 2158909 - 2158997
Alignment:
Q  274 tttgggtcagatcgaacatttgtaacataattcttaagttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaaa 362  Q
    ||||||| |||| |||||||||||||||||  | ||||||||  | |||||||||||||  | ||||||||||||||||||||||||||    
T  2158909 tttgggttagattgaacatttgtaacataaaacctaagttgatggcgtaacgccacttcctgcacatctataaaatcatttggataaaa 2158997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 92 - 227
Target Start/End: Complemental strand, 25023192 - 25023057
Alignment:
Q  92 attttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctac-cgcaagagcaaagccaacttcaaaagtt 190  Q
    |||||||||| || || ||| ||||||||||||   || ||||||||| |||||||||||| ||||| ||  | |||||||||| |||||||||||||||    
T  25023192 attttgttacatagttgacttttcacaactttcgcagcagaaaaaacatgttcaacacttgtagttgttattcacaagagcaaaaccaacttcaaaagtt 25023093  T
Q  191 tataaaccctagcaaatgtgttgcacttatttgtttc 227  Q
    ||||||   || ||||||| |||||||||||| ||||    
T  25023092 tataaa-tataacaaatgtattgcacttatttatttc 25023057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 40407897 - 40407798
Alignment:
Q  145 aacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtttataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaa 243  Q
    ||||||| || |||||| || ||| |||||| ||||||| ||||| |||||||   | |||||| |||||||||||||||||||||||||||||| ||||    
T  40407897 aacacttacaattgctatcgacaaaagcaaaaccaactttaaaagcttataaattattgcaaatatgttgcacttatttgtttccacaagttttgtacaa 40407798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 243
Target Start/End: Original strand, 56094925 - 56094965
Alignment:
Q  203 caaatgtgttgcacttatttgtttccacaagttttgcacaa 243  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  56094925 caaatgtgttgcacttatttgtttccataagttttgcacaa 56094965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 13834173 - 13834272
Alignment:
Q  145 aacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtttataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaa 243  Q
    |||| |||| |||||||||| ||| || ||||| ||| ||||||| |||| ||   |||||||| ||| |||||| ||||||||||||||||||||||||    
T  13834173 aacatttgcggttgctaccggcaaaaggaaagctaacctcaaaagcttatgaattgtagcaaatatgtcgcacttgtttgtttccacaagttttgcacaa 13834272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 206 - 305
Target Start/End: Complemental strand, 49078455 - 49078356
Alignment:
Q  206 atgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaacatttgtaacataatt 305  Q
    |||||||||||||||||||||   |||||||| || |||||||||||||  ||| || ||   ||| ||||| |||| ||||||||||| ||||||||||    
T  49078455 atgtgttgcacttatttgttttttcaagtttttcataaagatctgaaagttctttcagctgtgcaaattttgagtcacatcgaacatttctaacataatt 49078356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 35255142 - 35255208
Alignment:
Q  177 caacttcaaaagtttataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaa 243  Q
    |||||||||||  ||||||| | ||||||||||||| ||||| |||||||||| || ||||||||||    
T  35255142 caacttcaaaaacttataaatcatagcaaatgtgttacacttgtttgtttccataaattttgcacaa 35255208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 240
Target Start/End: Complemental strand, 32934373 - 32934340
Alignment:
Q  207 tgtgttgcacttatttgtttccacaagttttgca 240  Q
    |||||||||||||||||||| |||||||||||||    
T  32934373 tgtgttgcacttatttgttttcacaagttttgca 32934340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 150; Significance: 6e-79; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 83 - 362
Target Start/End: Original strand, 44873422 - 44873703
Alignment:
Q  83 taatcatcgattttgttacttaatttactcttcacaactttcatggctgaaaaaa-cacgttcaacacttgcagttgctaccg-caagagcaaagccaac 180  Q
    |||||| | |||||||||| ||  ||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||    
T  44873422 taatcacccattttgttacataggttactcttcacaactttcatatctgaaaaaaacacgttcaacacttgcagttgctaccggcaaaagcaaagccaac 44873521  T
Q  181 ttcaaaagtttataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggt 280  Q
    |||||||||||||||| | || ||| |||||||||| |||||||||| || ||||||||||||||||||||||  |||| |||||||| |  |||||| |    
T  44873522 ttcaaaagtttataaatcataacaattgtgttgcacatatttgtttctacgagttttgcacaaagatctgaaatgcctttcaacttaagacattttggat 44873621  T
Q  281 cagatcgaacatttgtaacataattcttaagttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaaa 362  Q
    ||||||||| || ||||||||||||||||||||||||| ||||| ||||||  || ||||||||||||||||||||||||||    
T  44873622 cagatcgaatatatgtaacataattcttaagttgagtgggtaacaccactttcggtacatctataaaatcatttggataaaa 44873703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 92 - 361
Target Start/End: Original strand, 29866311 - 29866581
Alignment:
Q  92 attttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtt 190  Q
    |||||||||| ||  |||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||| ||||| ||| | ||| ||||||||||    
T  29866311 attttgttacataggttactcttcacaactttcatagctgaaaaaatacgttaaacacttgcagttgctaccggcaagaacaaggtcaagttcaaaagtt 29866410  T
Q  191 tataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaac 290  Q
    || ||| | |||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||| |||| ||||||| |||||    
T  29866411 tagaaatcatagcaaatgtgttgcgtttatttgtttccacaagttttgcacaaagatctgaaaaccctttcaacttagcaaattttcggtcagaacgaac 29866510  T
Q  291 atttgtaacataattcttaagttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaa 361  Q
    |||||||| ||||||||||||||||  | |||| | |||||| |  |||||||||||||||||||||||||    
T  29866511 atttgtaatataattcttaagttgatggtgtaatgtcacttccgacacatctataaaatcatttggataaa 29866581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 93 - 361
Target Start/End: Original strand, 2148528 - 2148797
Alignment:
Q  93 ttttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagttt 191  Q
    ||||||||| ||||| |||||| ||||| ||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||| ||    
T  2148528 ttttgttacataattgactcttaacaaccttcatagctgaaaaaacacgttcaacatttgcagttgctaccgacaagagcaaagccagcttcaaaagctt 2148627  T
Q  192 ataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaaca 291  Q
    ||||| | ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||   ||||  ||| |||||||||||||  ||||    
T  2148628 ataaatcatagaaaatgtgttgcacttatttgttttcacaagttttgcacaaagatctgaaagccctttacactttgcaaattttgggtcagatttaaca 2148727  T
Q  292 tttgtaacataattcttaagttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaa 361  Q
    ||| |||||||||||| |||||||  | | ||||||||||  || |||| || |||||||||||||||||    
T  2148728 tttataacataattctgaagttgatggcgcaacgccacttatggcacatttaaaaaatcatttggataaa 2148797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 84 - 369
Target Start/End: Complemental strand, 24556872 - 24556586
Alignment:
Q  84 aatcatcgattttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccgc-aagagcaaagccaactt 182  Q
    ||||||| |||||||||| || ||  ||||||||||||||||| | ||||||||||| ||||| |||||||||||||||||  |||||||||||||||||    
T  24556872 aatcatccattttgttacatagttgtctcttcacaactttcatagttgaaaaaacacattcaatacttgcagttgctaccggtaagagcaaagccaactt 24556773  T
Q  183 caaaagtttataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtca 282  Q
    |||||  ||||||||| || |||||||||||||||||||||||| |||||||||||||||||| | ||||||||||| ||||||| ||| | ||| ||||    
T  24556772 caaaatcttataaaccataacaaatgtgttgcacttatttgttttcacaagttttgcacaaagttatgaaagccctttcaacttagcaaatcttgagtca 24556673  T
Q  283 gatcgaacatttgtaacataattcttaagttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaaatttagtc 369  Q
    ||| |||||||| ||||||||||| ||| ||||  | |||||||||||||    || |||| |||||||||||||||||||| ||||    
T  24556672 gattgaacatttataacataattcctaacttgatggcgtaacgccacttccaccacttctacaaaatcatttggataaaattcagtc 24556586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 92 - 361
Target Start/End: Complemental strand, 45486162 - 45485892
Alignment:
Q  92 attttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtt 190  Q
    |||||||||| ||| | |||||||||||  ||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |    
T  45486162 attttgttacgtaaatgactcttcacaatcttcatagctgaaaaaacacgttcaacacttgcagttgcaaccggcaagagcaaagccaacttcaaaagct 45486063  T
Q  191 tataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaac 290  Q
    || |||||  ||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||  ||| |||||| ||||||  |||    
T  45486062 taaaaaccaaagcaaatgtcttgcacttatttgtttccacaagtattgcacaaagatccgaaagccctttcaactttgcaaattttggatcagatttaac 45485963  T
Q  291 atttgtaacataattcttaagttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaa 361  Q
    |||| |||||||||| | ||||||  || | ||| ||||||| |  ||||||| |||||||||||||||||    
T  45485962 atttctaacataattatgaagttgtctgcgcaactccacttccgacacatctacaaaatcatttggataaa 45485892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 110 - 362
Target Start/End: Complemental strand, 32161335 - 32161081
Alignment:
Q  110 ctcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtttataaaccc-tagcaaat 207  Q
    |||||||||| |||||| | |||||||||||||||||||||| |||||||||||| |||||| || |||||||||||||| ||||||| || || |||||    
T  32161335 ctcttcacaattttcatagttgaaaaaacacgttcaacacttacagttgctaccggcaagagtaatgccaacttcaaaagcttataaaaccatatcaaat 32161236  T
Q  208 gtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaacatttgtaacataattct 307  Q
    |||   |||||||||||||||| |||||||||||||| ||||||||| |||| ||| ||| ||| ||||||||||||| |||||||||||||||||||||    
T  32161235 gtgcaacacttatttgtttccataagttttgcacaaaaatctgaaagtcctttcaatttagcaaattttgggtcagattgaacatttgtaacataattct 32161136  T
Q  308 taagttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaaa 362  Q
    ||||||||  | ||||| ||||||  |  |||||||||||||||||||| |||||    
T  32161135 taagttgatggcgtaacaccacttttgatacatctataaaatcatttgggtaaaa 32161081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 109 - 362
Target Start/End: Complemental strand, 6802703 - 6802449
Alignment:
Q  109 actcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtttataaaccctagcaaat 207  Q
    |||||||||||||||||| | ||||||||||||| ||| ||||||||||||||||| | |||||||| ||||||||||||| ||||||| | |  |||||    
T  6802703 actcttcacaactttcatagttgaaaaaacacgtgcaatacttgcagttgctaccggcgagagcaaaaccaacttcaaaagcttataaagcatttcaaat 6802604  T
Q  208 gtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaacatttgtaacataattct 307  Q
    |||||||| ||| ||||||||||| |||||||||||| || |||| | |||| | ||||  ||| ||||||||||||| |||||||| |||||||||||     
T  6802603 gtgttgcatttaattgtttccacatgttttgcacaaaaatatgaaggtcctttcgacttggcaaattttgggtcagattgaacatttataacataattcc 6802504  T
Q  308 taagttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaaa 362  Q
    ||||||||  | ||||| ||||||| |  ||||| ||||||||||||| ||||||    
T  6802503 taagttgatggcgtaacaccacttctgacacatccataaaatcatttgaataaaa 6802449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 83 - 243
Target Start/End: Complemental strand, 7681332 - 7681171
Alignment:
Q  83 taatcatcgattttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctacc-gcaagagcaaagccaact 181  Q
    |||||||| |||||||||| || || ||||||||||||||| || || ||||||||| ||||||||||||||  |||||||  ||||||||||  ||| |    
T  7681332 taatcatctattttgttacatagttgactcttcacaacttttatagcagaaaaaacatgttcaacacttgcatatgctaccaacaagagcaaaatcaatt 7681233  T
Q  182 tcaaaagtttataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaa 243  Q
    |||||||||||||||   ||  |||||||||||||||| |||||| ||||||||||||||||    
T  7681232 tcaaaagtttataaataataataaatgtgttgcacttacttgttttcacaagttttgcacaa 7681171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 93 - 196
Target Start/End: Complemental strand, 34696983 - 34696879
Alignment:
Q  93 ttttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctacc-gcaagagcaaagccaacttcaaaagttt 191  Q
    ||||||||| ||  ||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||| |||||||||||| ||| |||||||||||    
T  34696983 ttttgttacataggttactcttcacaattttcatagctgaaaaaacacgttcaacacttgcaattgctaccggcaagagcaaagtcaatttcaaaagttt 34696884  T
Q  192 ataaa 196  Q
    |||||    
T  34696883 ataaa 34696879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 41303411 - 41303312
Alignment:
Q  145 aacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtttataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaa 243  Q
    |||||||||| |||||| || ||| |||||| ||||||||||||| ||| ||| | ||||||||||||||||||||||||||| ||||||||||||||||    
T  41303411 aacacttgcatttgctatcgacaaaagcaaaaccaacttcaaaagcttacaaatcatagcaaatgtgttgcacttatttgttttcacaagttttgcacaa 41303312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 3662180 - 3662280
Alignment:
Q  145 aacacttgcagttgctaccgc-aagagcaaagccaacttcaaaag-tttataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcaca 242  Q
    |||||||||| |||||||||  || |||||||||||||||||||  |||||||| | ||||||||||| |||||||||||||||||| ||||||||||||    
T  3662180 aacacttgcatttgctaccgttaaaagcaaagccaacttcaaaaactttataaatcatagcaaatgtgctgcacttatttgtttccataagttttgcaca 3662279  T
Q  243 a 243  Q
    |    
T  3662280 a 3662280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 107 - 164
Target Start/End: Complemental strand, 11993656 - 11993599
Alignment:
Q  107 ttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg 164  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  11993656 ttactcttcacaacattcatagctgaaaaaacacgttcaacacttgcagttgctaccg 11993599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 92 - 227
Target Start/End: Original strand, 43421754 - 43421889
Alignment:
Q  92 attttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtt 190  Q
    |||||||||| ||||| ||| |||||||||||||| | | |||||||| |||| ||||||||| || |||||  ||| |||||||||||||| |||||||    
T  43421754 attttgttacataattgacttttcacaactttcatagtt-aaaaaacatgttcgacacttgcaatttctacccacaaaagcaaagccaactttaaaagtt 43421852  T
Q  191 tataaaccctagcaaatgtgttgcacttatttgtttc 227  Q
    |||||||  ||  |||| |||||||||||||| ||||    
T  43421853 tataaactataataaatatgttgcacttatttatttc 43421889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 92 - 152
Target Start/End: Original strand, 10381567 - 10381627
Alignment:
Q  92 attttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttg 152  Q
    ||||| |||| ||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  10381567 attttattacataagttactcttcacaactttcatagctgaaaaaacacgttcaacacttg 10381627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 176 - 243
Target Start/End: Complemental strand, 4587160 - 4587093
Alignment:
Q  176 ccaacttcaaaagtttataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaa 243  Q
    ||||||||||||  ||||||||| | |||||||||||| ||||||||||||||| |||||||||||||    
T  4587160 ccaacttcaaaaacttataaaccattgcaaatgtgttggacttatttgtttccataagttttgcacaa 4587093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 223
Target Start/End: Complemental strand, 7388054 - 7387963
Alignment:
Q  128 gctgaaaaaacacgttcaacacttgcagttgctac-cgcaagagcaaagccaacttcaaaagtttataaaccctagcaaatgtgttgcacttatttg 223  Q
    |||||||||||| |||||||||||||| ||||||| | |||||||     |||||||||||| ||||||| | || |||||||||||||| ||||||    
T  7388054 gctgaaaaaacatgttcaacacttgcaattgctactcacaagagc-----caacttcaaaagattataaatcataacaaatgtgttgcacctatttg 7387963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 143; Significance: 1e-74; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 85 - 362
Target Start/End: Complemental strand, 3357059 - 3356782
Alignment:
Q  85 atcatcgattttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttc 183  Q
    |||||| |||||||||| || |||||||||||||||||| || ||||||||| ||| ||||||||||||||||||||||  ||| ||||||| |||||||    
T  3357059 atcatccattttgttacatagtttactcttcacaacttttatagctgaaaaa-cacattcaacacttgcagttgctaccaacaatagcaaagtcaacttc 3356961  T
Q  184 aaaagtttataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcag 283  Q
    ||||||||||||| | |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||| |||| ||||||    
T  3356960 aaaagtttataaatcatagcaaatgtgttgcatttatttgtttccacaggttttgcacaaagatatgaaagccctttcaacttaacaaattttcggtcag 3356861  T
Q  284 atcgaacatttgtaacataattcttaagttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaaa 362  Q
    ||| ||||||| ||| ||||||| ||||||||  |  |||||||||| | |  ||||||||||||||||||| ||||||    
T  3356860 atcaaacatttataatataattcataagttgatggcataacgccactaccgacacatctataaaatcatttgtataaaa 3356782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 85 - 362
Target Start/End: Original strand, 32033113 - 32033389
Alignment:
Q  85 atcatcgattttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttc 183  Q
    |||||| |||||||||| ||  |||||||||||||||||||| ||| ||||||| | || ||||||||||| || ||||| |||||||||| ||||||||    
T  32033113 atcatccattttgttacataggttactcttcacaactttcatagctaaaaaaacgcctttaacacttgcagctgttaccggcaagagcaaaaccaacttc 32033212  T
Q  184 aaaagtttataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcag 283  Q
    ||||||||||||| | |||||||||||||||| |||||||||||||||||||||||| | |  |||  |||||||| ||||||| ||| ||||||||| |    
T  32033213 aaaagtttataaatcatagcaaatgtgttgcatttatttgtttccacaagttttgcaaagacttct--aagccctttcaacttagcaaattttgggtcgg 32033310  T
Q  284 atcgaacatttgtaacataattcttaagttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaaa 362  Q
    ||||||||||| ||||||||||||||||||||  | | ||| ||||||| |  ||||||||| ||||||||||||||||    
T  32033311 atcgaacatttataacataattcttaagttgatggcgaaacaccacttccgacacatctatacaatcatttggataaaa 32033389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 211 - 362
Target Start/End: Original strand, 6141559 - 6141710
Alignment:
Q  211 ttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaacatttgtaacataattcttaa 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||| ||||||| ||||||||||||||||||||||||    
T  6141559 ttgcacttatttgtttccacaagttttgcacaaagatctgaaagccctttcaacttagcaaattttgtgtcagatagaacatttgtaacataattcttaa 6141658  T
Q  311 gttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaaa 362  Q
    |||||||| ||||||||||||| |  ||||||||||||||||||||||||||    
T  6141659 gttgagtgcgtaacgccacttccgatacatctataaaatcatttggataaaa 6141710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 131 - 369
Target Start/End: Original strand, 11562191 - 11562429
Alignment:
Q  131 gaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtttataaaccctagcaaatgtgttgcacttatttgtttcca 229  Q
    |||||||||| ||||| ||||||| ||||||||| |||||| |||||||||||||| |||| ||||||  |||||||| ||||||| |||||||||||||    
T  11562191 gaaaaaacacattcaa-acttgcaattgctaccggcaagagtaaagccaacttcaatagttaataaactatagcaaatatgttgcatttatttgtttcca 11562289  T
Q  230 caagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaacatttgtaacataattcttaagttgagtgagtaacgccac 329  Q
    ||||||||||||||| || |||||| | || ||||||| ||| |||||||||| ||| ||||||||||||||||||||||||||||  | ||||||||||    
T  11562290 caagttttgcacaaatatatgaaagtcgtttcaacttagcaaattttgggtcaaatcaaacatttgtaacataattcttaagttgatggcgtaacgccac 11562389  T
Q  330 ttcaggaacatctataaaatcatttggataaaatttagtc 369  Q
    ||| |  |||||||| ||||||||| ||||||||| ||||    
T  11562390 ttccgacacatctattaaatcatttagataaaattcagtc 11562429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 211 - 362
Target Start/End: Original strand, 18458861 - 18459012
Alignment:
Q  211 ttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaacatttgtaacataattcttaa 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||| ||| |||| ||||||||||||||||||| ||||    
T  18458861 ttgcacttatttgtttccacaagttttgcacaaagatctgaaagccctttcaacttagcaaattttaggttagatagaacatttgtaacataattattaa 18458960  T
Q  311 gttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaaa 362  Q
    |||||||| ||||||||||||| || ||||||||||||||||||||||||||    
T  18458961 gttgagtgtgtaacgccacttccggcacatctataaaatcatttggataaaa 18459012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 92 - 305
Target Start/End: Original strand, 4075588 - 4075801
Alignment:
Q  92 attttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtt 190  Q
    ||||| |||| ||| | |||||||||||  ||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |    
T  4075588 attttattacgtaaatgactcttcacaatcttcatagctgaaaaaacacgttcaacacttgcagttgcaaccggcaagagcaaagccaacttcaaaagct 4075687  T
Q  191 tataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaac 290  Q
    || |||||  ||||||||| |||||||||||||||||||||||| ||||||||||||| | |||||||| ||||||  ||| |||||| ||||||  |||    
T  4075688 taaaaaccaaagcaaatgtcttgcacttatttgtttccacaagtattgcacaaagatc-ggaagccctttcaactttgcaaattttggatcagatttaac 4075786  T
Q  291 atttgtaacataatt 305  Q
    |||| ||||||||||    
T  4075787 atttctaacataatt 4075801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 111 - 362
Target Start/End: Complemental strand, 18703599 - 18703350
Alignment:
Q  111 tcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtttataaaccctagcaaatgt 209  Q
    |||||||||||||||| | |||||||| ||||||||||| || ||||||||  | |||||||||||||||||||||||| ||||||||| || ||||| |    
T  18703599 tcttcacaactttcatagttgaaaaaatacgttcaacacatgtagttgctataggcaagagcaaagccaacttcaaaagcttataaaccatatcaaatat 18703500  T
Q  210 gttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaacatttgtaacataattctta 309  Q
    ||| |||||||||||||| || ||||||| |||| ||||| ||| | ||| |||||   ||| |||||||| |||| |||||||| ||||||||||   |    
T  18703499 gtttcacttatttgtttctactagttttgaacaaggatctaaaaactcttgcaact---caaattttgggttagattgaacatttataacataatttcga 18703403  T
Q  310 agttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaaa 362  Q
    ||||||  | | ||| |||||||    || |||| ||||||||||||||||||    
T  18703402 agttgatggcgcaaccccacttctaacacttctaaaaaatcatttggataaaa 18703350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 201 - 361
Target Start/End: Original strand, 4075822 - 4075982
Alignment:
Q  201 agcaaatgtgttgcacttatttgtttccacaagttttgcacaaagatctgaaagcccttacaacttaacaacttttgggtcagatcgaacatttgtaaca 300  Q
    ||||||||| |||||||||||| ||||||||||| ||||||||||||  |||||||||| ||||||  ||| |||||| ||||||  ||||||| |||||    
T  4075822 agcaaatgtcttgcacttatttatttccacaagtattgcacaaagattcgaaagccctttcaactttgcaaattttggatcagatttaacatttctaaca 4075921  T
Q  301 taattcttaagttgagtgagtaacgccacttcaggaacatctataaaatcatttggataaa 361  Q
    ||||| | ||||||  || | ||| ||||||| |  ||||||| |||||||||||||||||    
T  4075922 taattatgaagttgtctgcgcaactccacttccgacacatctacaaaatcatttggataaa 4075982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 113 - 221
Target Start/End: Original strand, 7700509 - 7700618
Alignment:
Q  113 ttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctacc-gcaagagcaaagccaacttcaaaagtttataaaccctagcaaatgtgt 211  Q
    |||| ||||||||| ||||||||||||||||||||| |||||  ||||||| |||||||||||| |||| ||||||| ||||||||| || |||||||||    
T  7700509 ttcataactttcatagctgaaaaaacacgttcaacatttgcaaatgctaccagcaagagcaaagtcaacgtcaaaagcttataaaccataacaaatgtgt 7700608  T
Q  212 tgcacttatt 221  Q
    || |||||||    
T  7700609 tgaacttatt 7700618  T

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Target: chr2; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 7165409 - 7165508
Alignment:
Q  145 aacacttgcagttgctaccg-caagagcaaagccaacttcaaaagtttataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaa 243  Q
    ||||||||| |||||||||| ||| ||||| ||||| |||||||| |||| || | || |||||| || |||||| ||||||||||||||||||||||||    
T  7165409 aacacttgcggttgctaccgacaaaagcaacgccaatttcaaaagcttatgaatcataacaaatgggtcgcacttgtttgtttccacaagttttgcacaa 7165508  T

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Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 113 - 227
Target Start/End: Original strand, 38417898 - 38418013
Alignment:
Q  113 ttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctacc-gcaagagcaaagccaacttcaaaagtttataaaccctagcaaatgtgt 211  Q
    |||||||||||  | || ||||| ||||  |||||||||||| |||||||  ||||||||| |  |||||||||||| ||||||| | || ||||| |||    
T  38417898 ttcacaacttttgtagcagaaaatacacaatcaacacttgcaattgctacatgcaagagcacaatcaacttcaaaagcttataaatcataacaaatatgt 38417997  T
Q  212 tgcacttatttgtttc 227  Q
    ||||||||||| ||||    
T  38417998 tgcacttatttatttc 38418013  T

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Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 227
Target Start/End: Complemental strand, 16639099 - 16639002
Alignment:
Q  130 tgaaaaaacacgttcaacacttgcagttgctac-cgcaagagcaaagccaacttcaaaagtttataaaccctagcaaatgtgttgcacttatttgtttc 227  Q
    |||| |||||||| |||||||||||||||  || || |||||||||  ||||||||||  ||||||| |  || |||||||||||||||||||||||||    
T  16639099 tgaagaaacacgtccaacacttgcagttgtcactcgtaagagcaaaatcaacttcaaacatttataatca-taacaaatgtgttgcacttatttgtttc 16639002  T

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Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 109 - 192
Target Start/End: Complemental strand, 34878582 - 34878498
Alignment:
Q  109 actcttcacaactttcatggctgaaaaaacacgttcaacacttgcagttgctaccg-caagagcaaagccaacttcaaaagttta 192  Q
    ||||||||||||||| ||   ||||||| || ||||||||||||| ||| |||||| |||  | |||||||||||||||||||||    
T  34878582 actcttcacaacttttataattgaaaaagcatgttcaacacttgccgttactaccgacaaaggtaaagccaacttcaaaagttta 34878498  T

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Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 169 - 245
Target Start/End: Complemental strand, 20966385 - 20966312
Alignment:
Q  169 agcaaagccaacttcaaaagtttataaaccctagcaaatgtgttgcacttatttgtttccacaagttttgcacaaag 245  Q
    ||||||||||| |||||||  |||||||   |||||||||||||| |||||||| |||  |||||||||| ||||||    
T  20966385 agcaaagccaatttcaaaaacttataaa---tagcaaatgtgttgtacttatttatttttacaagttttgtacaaag 20966312  T

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Target: scaffold0684 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0684
Description:

Target: scaffold0684; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 152
Target Start/End: Original strand, 4254 - 4311
Alignment:
Q  95 ttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttg 152  Q
    |||||||||| || ||||||||||  |||||| ||||| |||||||||||||||||||    
T  4254 ttgttacttatttgactcttcacatatttcatagctgagaaaacacgttcaacacttg 4311  T

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Target: scaffold0535 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 9895 - 9956
Alignment:
Q  166 aagagcaaagccaacttcaaaagtttataaaccctagcaaatgtgttgcacttatttgtttc 227  Q
    |||||||||| |||||||||||  |||||||   || |||||||||||||||||||||||||    
T  9895 aagagcaaagtcaacttcaaaatcttataaaatataacaaatgtgttgcacttatttgtttc 9956  T

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Target: scaffold0163 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 152
Target Start/End: Complemental strand, 3864 - 3807
Alignment:
Q  95 ttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttg 152  Q
    |||||||||| || ||||||||||  |||||| ||||| |||||||||||||||||||    
T  3864 ttgttacttatttgactcttcacatatttcatagctgagaaaacacgttcaacacttg 3807  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 461296 - 461228
Alignment:
Q  83 taatcatcgattttgttacttaatttactcttcacaactttcatggctgaaaaaacacgttcaacacttg 152  Q
    |||||||| ||||||| || ||  ||||| |||||||||| ||| | |||||||||||||||||||||||    
T  461296 taatcatccattttgtcacataggttacttttcacaactt-catagttgaaaaaacacgttcaacacttg 461228  T

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