View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1277_low_32 (Length: 212)
Name: NF1277_low_32
Description: NF1277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1277_low_32 |
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Alignment Details
Target: chr8 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 29878508 - 29878709
Alignment:
| Q |
1 |
accaattttctgcatacaagaaaatcccaatttcaatcattacaactacaacaattgtttgaacaaacatattcatgaggttattccttttcactttcca |
100 |
Q |
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| T |
29878508 |
accaattttctgcatacaagaaaatcccaatttcaatcattacaactacaacaattgtttgaacaaacataattatgaggttattccttttcactt-cca |
29878606 |
T |
|
| Q |
101 |
atttatttgtttaccttaggctatgtttcattctttgcttgtacatttgttgctacacatttttgttaaatcaattgtatggaaaacaagaacctagtat |
200 |
Q |
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| T |
29878607 |
atttttttgtttaccttaggctatgtttcattctttgcttgtacatttgttgctacacatttttgttaaatcaattgtatggaaaacaagaacctagtat |
29878706 |
T |
|
| Q |
201 |
tat |
203 |
Q |
| |
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||| |
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| T |
29878707 |
tat |
29878709 |
T |
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