View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1278-2A-Insertion-22 (Length: 149)
Name: NF1278-2A-Insertion-22
Description: NF1278-2A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1278-2A-Insertion-22 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 130; Significance: 1e-67; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 8 - 149
Target Start/End: Original strand, 42306045 - 42306186
Alignment:
| Q |
8 |
cacatcatgtgattatatatgaattatgtcattatctcaaattcttatgacgtaaaattgaagaataggataggagacatacacatgtcccgcagaagca |
107 |
Q |
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| T |
42306045 |
cacatcatgtgattatatatgaatcatgtcattatctcaaattattatgacgtaaaattgaagaataggataggagacatacacatgtccagcagaagca |
42306144 |
T |
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| Q |
108 |
gtaaacgtaagagccttagaatttgttgatgaatctacaagt |
149 |
Q |
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| T |
42306145 |
gtaaacgtaagagccttagaatttgttgatgaatctacaagt |
42306186 |
T |
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