View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1278-2A-Insertion-4 (Length: 436)

Name: NF1278-2A-Insertion-4
Description: NF1278-2A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1278-2A-Insertion-4
NF1278-2A-Insertion-4
[»] chr8 (103 HSPs)
chr8 (29-226)||(31603397-31603595)
chr8 (319-436)||(23275410-23275528)
chr8 (319-436)||(23403686-23403804)
chr8 (310-427)||(27702597-27702714)
chr8 (319-436)||(24469457-24469575)
chr8 (332-436)||(9117763-9117868)
chr8 (309-436)||(28463793-28463921)
chr8 (315-427)||(29218338-29218450)
chr8 (309-424)||(6121495-6121610)
chr8 (319-436)||(9117500-9117618)
chr8 (313-427)||(23404079-23404193)
chr8 (319-436)||(29276618-29276736)
chr8 (319-436)||(44728107-44728225)
chr8 (320-427)||(22444603-22444710)
chr8 (315-436)||(15315094-15315215)
chr8 (315-436)||(15495463-15495584)
chr8 (335-436)||(35435571-35435673)
chr8 (340-436)||(4157834-4157931)
chr8 (311-427)||(1692171-1692287)
chr8 (335-427)||(4157591-4157683)
chr8 (319-427)||(6121849-6121957)
chr8 (335-423)||(31826847-31826935)
chr8 (314-436)||(1043631-1043754)
chr8 (316-427)||(38507057-38507168)
chr8 (335-436)||(1043898-1044000)
chr8 (337-427)||(2250724-2250814)
chr8 (315-436)||(29457112-29457234)
chr8 (310-427)||(2251050-2251167)
chr8 (314-422)||(22780053-22780159)
chr8 (335-427)||(2257068-2257160)
chr8 (335-427)||(9117576-9117668)
chr8 (319-430)||(15300579-15300691)
chr8 (319-430)||(15480948-15481060)
chr8 (337-436)||(15891832-15891932)
chr8 (335-427)||(23403823-23403915)
chr8 (335-427)||(24043805-24043897)
chr8 (335-427)||(31618371-31618463)
chr8 (315-427)||(42691890-42692002)
chr8 (335-430)||(1043712-1043807)
chr8 (335-436)||(23403762-23403865)
chr8 (335-436)||(24043745-24043847)
chr8 (335-424)||(9779139-9779228)
chr8 (335-427)||(2257396-2257488)
chr8 (335-427)||(15315173-15315265)
chr8 (335-427)||(15495542-15495634)
chr8 (335-423)||(15891645-15891733)
chr8 (335-423)||(15891786-15891874)
chr8 (335-427)||(23275360-23275452)
chr8 (335-426)||(15300864-15300955)
chr8 (330-436)||(15315360-15315467)
chr8 (335-426)||(15481233-15481324)
chr8 (330-436)||(15495729-15495836)
chr8 (337-423)||(22444889-22444975)
chr8 (315-436)||(22444935-22445057)
chr8 (333-423)||(44318423-44318513)
chr8 (366-427)||(7148-7209)
chr8 (320-436)||(31827142-31827258)
chr8 (314-418)||(6930-7034)
chr8 (335-427)||(9117713-9117805)
chr8 (361-436)||(15300913-15300989)
chr8 (361-436)||(15481282-15481358)
chr8 (351-423)||(35435401-35435473)
chr8 (315-407)||(38507292-38507384)
chr8 (337-428)||(11482616-11482706)
chr8 (312-407)||(29276900-29276995)
chr8 (369-427)||(9779033-9779091)
chr8 (335-436)||(15891585-15891687)
chr8 (318-424)||(44728389-44728495)
chr8 (337-430)||(35435327-35435420)
chr8 (318-427)||(44318479-44318588)
chr8 (366-436)||(7198-7269)
chr8 (340-418)||(31618708-31618787)
chr8 (369-427)||(29276820-29276878)
chr8 (350-427)||(7026-7103)
chr8 (366-423)||(1691932-1691989)
chr8 (361-430)||(9778965-9779034)
chr8 (366-423)||(15315314-15315371)
chr8 (366-423)||(15495683-15495740)
chr8 (335-424)||(29218418-29218507)
chr8 (361-414)||(29276720-29276773)
chr8 (350-427)||(31618639-31618716)
chr8 (361-418)||(31827101-31827158)
chr8 (350-426)||(27702355-27702431)
chr8 (333-417)||(27702398-27702482)
chr8 (337-425)||(28463881-28463969)
chr8 (335-427)||(35435521-35435613)
chr8 (368-423)||(1691874-1691929)
chr8 (335-418)||(42620470-42620553)
chr8 (335-417)||(24469418-24469499)
chr8 (368-417)||(42692057-42692106)
chr8 (335-427)||(2250782-2250874)
chr8 (335-417)||(1043858-1043940)
chr8 (335-417)||(4157651-4157733)
chr8 (337-427)||(6121583-6121673)
chr8 (398-436)||(22780270-22780308)
chr8 (337-430)||(29457194-29457288)
chr8 (369-423)||(38507171-38507225)
chr8 (366-423)||(35236799-35236856)
chr8 (397-430)||(38169776-38169809)
chr8 (366-427)||(4157788-4157845)
chr8 (369-436)||(11482666-11482734)
chr8 (335-423)||(27702541-27702629)
chr8 (311-387)||(42692149-42692224)
[»] chr6 (20 HSPs)
chr6 (312-436)||(5985767-5985892)
chr6 (314-436)||(29134904-29135026)
chr6 (335-436)||(4799331-4799433)
chr6 (335-427)||(24012508-24012600)
chr6 (319-424)||(9049760-9049865)
chr6 (327-423)||(33041001-33041097)
chr6 (314-436)||(14942244-14942367)
chr6 (335-427)||(5985850-5985942)
chr6 (333-427)||(7858636-7858730)
chr6 (319-407)||(4799577-4799665)
chr6 (366-427)||(4799528-4799589)
chr6 (335-424)||(33040938-33041029)
chr6 (335-417)||(7675578-7675660)
chr6 (366-427)||(4997927-4997988)
chr6 (335-418)||(4799391-4799474)
chr6 (335-427)||(29134984-29135076)
chr6 (335-430)||(4997659-4997754)
chr6 (320-436)||(5986014-5986134)
chr6 (319-377)||(7858591-7858649)
chr6 (350-423)||(14942340-14942413)
[»] chr7 (81 HSPs)
chr7 (314-436)||(22563966-22564089)
chr7 (315-436)||(6723456-6723578)
chr7 (319-436)||(42430619-42430737)
chr7 (319-436)||(3173221-3173339)
chr7 (319-436)||(18942557-18942675)
chr7 (319-436)||(42759203-42759321)
chr7 (335-436)||(48840238-48840340)
chr7 (335-436)||(18942310-18942412)
chr7 (319-436)||(44448996-44449114)
chr7 (319-436)||(46855258-46855376)
chr7 (335-427)||(3173563-3173653)
chr7 (319-432)||(35127437-35127549)
chr7 (319-430)||(8919489-8919599)
chr7 (314-436)||(10096940-10097062)
chr7 (338-436)||(22642102-22642201)
chr7 (310-436)||(30648436-30648562)
chr7 (338-436)||(9907492-9907590)
chr7 (319-436)||(9907794-9907912)
chr7 (319-425)||(29036399-29036504)
chr7 (319-413)||(38995235-38995329)
chr7 (319-436)||(42758940-42759058)
chr7 (335-427)||(3173297-3173389)
chr7 (319-430)||(41718322-41718434)
chr7 (313-424)||(39304963-39305074)
chr7 (335-426)||(48840189-48840280)
chr7 (333-427)||(6723406-6723500)
chr7 (333-427)||(9907684-9907778)
chr7 (315-436)||(10470502-10470623)
chr7 (304-436)||(22563688-22563821)
chr7 (310-427)||(45443386-45443503)
chr7 (335-423)||(30648218-30648306)
chr7 (335-423)||(42759016-42759104)
chr7 (320-418)||(37042976-37043074)
chr7 (319-436)||(37043308-37043425)
chr7 (338-427)||(37393659-37393748)
chr7 (316-436)||(44941259-44941380)
chr7 (319-436)||(45909937-45910051)
chr7 (335-427)||(8919564-8919656)
chr7 (335-423)||(22563779-22563867)
chr7 (335-423)||(22563920-22564008)
chr7 (335-423)||(37393333-37393420)
chr7 (335-427)||(45324840-45324932)
chr7 (335-430)||(44449072-44449167)
chr7 (338-436)||(45324890-45324989)
chr7 (368-427)||(45443282-45443341)
chr7 (334-424)||(47193511-47193601)
chr7 (335-436)||(48840023-48840124)
chr7 (338-427)||(18808113-18808202)
chr7 (333-430)||(44449201-44449297)
chr7 (350-423)||(45203783-45203856)
chr7 (319-418)||(22641894-22641998)
chr7 (335-427)||(30648278-30648370)
chr7 (335-423)||(44941213-44941301)
chr7 (335-423)||(45324574-45324661)
chr7 (334-436)||(8919722-8919825)
chr7 (338-436)||(35127698-35127797)
chr7 (337-427)||(29036337-29036427)
chr7 (312-436)||(41718004-41718128)
chr7 (335-417)||(42430579-42430661)
chr7 (337-427)||(42759153-42759243)
chr7 (361-423)||(45203668-45203730)
chr7 (338-427)||(29036203-29036292)
chr7 (338-423)||(44941075-44941160)
chr7 (350-423)||(45909891-45909964)
chr7 (316-436)||(47332331-47332451)
chr7 (335-423)||(18942511-18942599)
chr7 (337-436)||(45443191-45443291)
chr7 (368-427)||(35127544-35127603)
chr7 (372-417)||(6723275-6723320)
chr7 (366-423)||(22642056-22642113)
chr7 (366-427)||(35127648-35127709)
chr7 (336-436)||(44941013-44941114)
chr7 (335-423)||(37043263-37043350)
chr7 (350-436)||(9907734-9907821)
chr7 (333-416)||(39305043-39305125)
chr7 (366-436)||(45203829-45203900)
chr7 (335-414)||(46855221-46855300)
chr7 (335-436)||(10097021-10097121)
chr7 (350-423)||(18942385-18942458)
chr7 (335-427)||(37393392-37393484)
chr7 (335-427)||(47193448-47193540)
[»] chr3 (75 HSPs)
chr3 (319-430)||(10820219-10820330)
chr3 (310-436)||(33623344-33623471)
chr3 (314-436)||(11871388-11871511)
chr3 (335-436)||(13712293-13712395)
chr3 (319-423)||(13658171-13658275)
chr3 (335-436)||(7515413-7515515)
chr3 (335-436)||(43122605-43122707)
chr3 (320-436)||(7515631-7515748)
chr3 (319-418)||(1771971-1772069)
chr3 (335-436)||(26997211-26997313)
chr3 (319-436)||(29777243-29777360)
chr3 (319-427)||(13657893-13658001)
chr3 (335-427)||(17579759-17579851)
chr3 (335-426)||(7515473-7515564)
chr3 (322-427)||(3750599-3750705)
chr3 (316-436)||(43122851-43122973)
chr3 (311-427)||(8112808-8112924)
chr3 (335-427)||(48517926-48518018)
chr3 (319-423)||(50293835-50293939)
chr3 (318-421)||(25147119-25147222)
chr3 (314-436)||(24098225-24098350)
chr3 (319-436)||(47220474-47220592)
chr3 (350-424)||(52211935-52212009)
chr3 (320-436)||(26997457-26997574)
chr3 (350-427)||(31324205-31324282)
chr3 (335-427)||(10820432-10820524)
chr3 (337-436)||(11218350-11218450)
chr3 (335-427)||(11871469-11871561)
chr3 (319-423)||(11871639-11871743)
chr3 (335-427)||(13712106-13712198)
chr3 (361-427)||(3750880-3750946)
chr3 (319-436)||(13712030-13712148)
chr3 (337-427)||(13712243-13712333)
chr3 (319-436)||(47220225-47220343)
chr3 (338-424)||(48518256-48518342)
chr3 (366-427)||(11218163-11218224)
chr3 (335-424)||(25147414-25147503)
chr3 (350-427)||(33623172-33623249)
chr3 (324-436)||(52211982-52212095)
chr3 (335-427)||(11218269-11218361)
chr3 (335-427)||(24097978-24098070)
chr3 (335-427)||(29777318-29777410)
chr3 (335-427)||(43122801-43122893)
chr3 (335-427)||(48517986-48518077)
chr3 (368-427)||(17580004-17580063)
chr3 (366-436)||(24097949-24098020)
chr3 (319-430)||(48381893-48382003)
chr3 (337-427)||(10820297-10820387)
chr3 (319-436)||(17580054-17580172)
chr3 (333-427)||(33623294-33623388)
chr3 (335-423)||(13657969-13658058)
chr3 (338-427)||(48382236-48382325)
chr3 (366-418)||(24098124-24098176)
chr3 (310-378)||(29777535-29777603)
chr3 (316-436)||(33623077-33623199)
chr3 (335-417)||(47220434-47220516)
chr3 (366-427)||(29777455-29777516)
chr3 (335-427)||(13658107-13658199)
chr3 (335-423)||(26997411-26997499)
chr3 (367-423)||(50293775-50293831)
chr3 (366-436)||(31324161-31324232)
chr3 (369-424)||(54924084-54924139)
chr3 (340-426)||(29231048-29231134)
chr3 (338-386)||(11218079-11218127)
chr3 (350-418)||(47220316-47220384)
chr3 (336-427)||(43122666-43122756)
chr3 (320-419)||(54923738-54923837)
chr3 (331-377)||(10820513-10820559)
chr3 (335-377)||(31324478-31324520)
chr3 (339-405)||(37148194-37148260)
chr3 (396-436)||(1771724-1771765)
chr3 (383-427)||(7515610-7515654)
chr3 (398-430)||(23232317-23232349)
chr3 (383-427)||(31324457-31324501)
chr3 (335-387)||(37148630-37148682)
[»] chr2 (88 HSPs)
chr2 (314-436)||(15786985-15787106)
chr2 (319-436)||(5482870-5482988)
chr2 (313-430)||(43671175-43671292)
chr2 (315-423)||(15285788-15285896)
chr2 (335-436)||(45638074-45638176)
chr2 (319-432)||(7881928-7882041)
chr2 (339-427)||(28238450-28238538)
chr2 (319-427)||(35125581-35125689)
chr2 (310-436)||(4603737-4603864)
chr2 (315-417)||(5483153-5483255)
chr2 (319-436)||(11974152-11974270)
chr2 (335-436)||(28582396-28582498)
chr2 (319-424)||(7438444-7438549)
chr2 (315-427)||(30512945-30513057)
chr2 (316-432)||(33616005-33616121)
chr2 (313-436)||(45638321-45638445)
chr2 (310-436)||(1038861-1038988)
chr2 (332-423)||(29683588-29683679)
chr2 (313-427)||(33953146-33953260)
chr2 (351-436)||(33953465-33953551)
chr2 (337-417)||(15286086-15286166)
chr2 (351-430)||(5248162-5248241)
chr2 (319-436)||(1039133-1039251)
chr2 (319-436)||(11973918-11974036)
chr2 (335-436)||(28182386-28182488)
chr2 (319-436)||(29683885-29684002)
chr2 (335-436)||(34334544-34334646)
chr2 (335-436)||(42553688-42553789)
chr2 (319-427)||(36387414-36387522)
chr2 (335-427)||(1844502-1844594)
chr2 (335-427)||(28582456-28582548)
chr2 (335-419)||(30513169-30513253)
chr2 (335-427)||(30823639-30823731)
chr2 (319-427)||(30851060-30851168)
chr2 (315-427)||(33615734-33615845)
chr2 (335-427)||(43671394-43671486)
chr2 (320-436)||(43671444-43671565)
chr2 (319-427)||(43865351-43865459)
chr2 (308-423)||(28182113-28182227)
chr2 (352-427)||(28238713-28238788)
chr2 (335-436)||(30851261-30851363)
chr2 (333-427)||(1038944-1039038)
chr2 (331-436)||(5247925-5248031)
chr2 (335-417)||(33953425-33953507)
chr2 (335-436)||(40343689-40343790)
chr2 (366-427)||(5248078-5248139)
chr2 (354-427)||(7438323-7438396)
chr2 (350-427)||(11974102-11974179)
chr2 (319-407)||(35125340-35125428)
chr2 (335-427)||(45638134-45638226)
chr2 (319-417)||(7881615-7881713)
chr2 (333-423)||(30513023-30513113)
chr2 (337-427)||(35125521-35125611)
chr2 (333-427)||(43671255-43671349)
chr2 (350-423)||(5482961-5483034)
chr2 (350-423)||(45638275-45638348)
chr2 (361-436)||(4603516-4603592)
chr2 (335-407)||(5247989-5248061)
chr2 (366-430)||(44436595-44436659)
chr2 (366-436)||(34334791-34334862)
chr2 (319-406)||(44436417-44436504)
chr2 (350-424)||(28182340-28182413)
chr2 (361-427)||(42553638-42553704)
chr2 (350-427)||(5483083-5483160)
chr2 (354-423)||(9144158-9144227)
chr2 (350-427)||(34334741-34334818)
chr2 (354-427)||(35125404-35125477)
chr2 (320-436)||(40343748-40343865)
chr2 (335-423)||(1039087-1039175)
chr2 (366-430)||(4603684-4603748)
chr2 (335-386)||(4603461-4603512)
chr2 (335-417)||(28182199-28182282)
chr2 (366-425)||(34334635-34334694)
chr2 (337-436)||(40343631-40343729)
chr2 (366-427)||(44436493-44436553)
chr2 (335-427)||(4603550-4603642)
chr2 (319-430)||(36387260-36387372)
chr2 (366-436)||(5248215-5248286)
chr2 (338-436)||(28238763-28238860)
chr2 (369-427)||(30851213-30851269)
chr2 (369-427)||(30823429-30823487)
chr2 (333-427)||(33615811-33615905)
chr2 (337-427)||(33615950-33616040)
chr2 (354-407)||(5248037-5248090)
chr2 (319-392)||(30823329-30823402)
chr2 (369-418)||(40343590-40343639)
chr2 (383-427)||(11974013-11974057)
chr2 (369-417)||(15786945-15786993)
[»] chr4 (95 HSPs)
chr4 (311-436)||(18598523-18598649)
chr4 (312-436)||(14336616-14336741)
chr4 (319-427)||(13846594-13846702)
chr4 (319-436)||(34979478-34979596)
chr4 (314-436)||(15631632-15631754)
chr4 (316-436)||(7633025-7633145)
chr4 (332-436)||(20421072-20421177)
chr4 (317-436)||(21956019-21956140)
chr4 (319-436)||(25154786-25154903)
chr4 (315-427)||(5322495-5322607)
chr4 (337-436)||(40289684-40289784)
chr4 (319-436)||(14336886-14337004)
chr4 (335-436)||(26553940-26554042)
chr4 (338-427)||(53856740-53856829)
chr4 (319-408)||(55358552-55358641)
chr4 (335-427)||(14336836-14336928)
chr4 (312-436)||(25363546-25363672)
chr4 (313-423)||(27389779-27389889)
chr4 (335-417)||(41898339-41898421)
chr4 (337-436)||(7632838-7632938)
chr4 (335-423)||(21956369-21956457)
chr4 (319-427)||(35778981-35779089)
chr4 (361-427)||(21956124-21956190)
chr4 (335-436)||(41898133-41898234)
chr4 (335-436)||(50523074-50523176)
chr4 (314-423)||(29031258-29031367)
chr4 (314-423)||(29043377-29043486)
chr4 (319-427)||(32557326-32557432)
chr4 (335-427)||(18598205-18598297)
chr4 (350-430)||(41898207-41898287)
chr4 (335-430)||(15631579-15631674)
chr4 (333-424)||(25363499-25363590)
chr4 (332-423)||(40998430-40998521)
chr4 (335-436)||(41898379-41898481)
chr4 (314-423)||(46429982-46430091)
chr4 (351-427)||(13870456-13870532)
chr4 (335-427)||(14336699-14336791)
chr4 (335-423)||(15631337-15631425)
chr4 (310-430)||(32751097-32751217)
chr4 (335-423)||(40998182-40998269)
chr4 (319-423)||(52850872-52850976)
chr4 (333-435)||(40998120-40998223)
chr4 (337-427)||(14966365-14966455)
chr4 (335-436)||(14966415-14966517)
chr4 (335-436)||(32751337-32751439)
chr4 (314-430)||(6112060-6112177)
chr4 (354-427)||(20421183-20421256)
chr4 (335-392)||(32751322-32751379)
chr4 (350-427)||(35778921-35778998)
chr4 (318-427)||(41511279-41511388)
chr4 (338-419)||(46429733-46429814)
chr4 (337-426)||(50523136-50523225)
chr4 (366-427)||(53856574-53856635)
chr4 (335-407)||(20421135-20421207)
chr4 (335-427)||(23159109-23159201)
chr4 (333-417)||(34508867-34508951)
chr4 (337-424)||(13864082-13864169)
chr4 (319-430)||(29031604-29031715)
chr4 (319-430)||(29043724-29043835)
chr4 (310-427)||(3253456-3253574)
chr4 (361-427)||(13846747-13846813)
chr4 (337-427)||(27389920-27390010)
chr4 (369-427)||(29031547-29031605)
chr4 (369-427)||(29043667-29043725)
chr4 (335-421)||(34979554-34979640)
chr4 (366-424)||(46429821-46429879)
chr4 (319-417)||(53856467-53856565)
chr4 (361-427)||(55358484-55358550)
chr4 (338-407)||(13870627-13870696)
chr4 (338-411)||(14966103-14966176)
chr4 (335-427)||(18598473-18598565)
chr4 (335-427)||(25154736-25154827)
chr4 (186-222)||(27668455-27668491)
chr4 (334-417)||(6111865-6111948)
chr4 (369-427)||(6112003-6112061)
chr4 (316-378)||(25154549-25154611)
chr4 (315-436)||(32557049-32557171)
chr4 (332-436)||(6111812-6111908)
chr4 (375-424)||(23159089-23159138)
chr4 (350-427)||(32557144-32557221)
chr4 (338-427)||(32751185-32751273)
chr4 (350-423)||(40289607-40289680)
chr4 (350-427)||(53856680-53856757)
chr4 (383-427)||(7633004-7633048)
chr4 (335-427)||(25154599-25154691)
chr4 (350-436)||(13870396-13870482)
chr4 (350-436)||(27389970-27390057)
chr4 (368-427)||(52851125-52851184)
chr4 (354-423)||(13870581-13870651)
chr4 (383-436)||(40289653-40289707)
chr4 (383-424)||(35778724-35778765)
chr4 (397-430)||(40289398-40289431)
chr4 (383-423)||(7632915-7632955)
chr4 (397-436)||(13846797-13846837)
chr4 (335-387)||(26553930-26553982)
[»] scaffold0016 (4 HSPs)
scaffold0016 (310-430)||(202269-202389)
scaffold0016 (335-427)||(202491-202583)
scaffold0016 (335-424)||(202354-202443)
scaffold0016 (369-436)||(202541-202609)
[»] chr1 (69 HSPs)
chr1 (315-436)||(38823724-38823846)
chr1 (314-419)||(5739368-5739473)
chr1 (337-436)||(39834007-39834107)
chr1 (314-436)||(45721123-45721246)
chr1 (330-436)||(18030203-18030309)
chr1 (335-427)||(1695782-1695874)
chr1 (333-436)||(20492000-20492104)
chr1 (319-436)||(48074398-48074515)
chr1 (335-436)||(49113162-49113264)
chr1 (320-436)||(1102863-1102980)
chr1 (319-424)||(5739491-5739596)
chr1 (332-425)||(29987215-29987308)
chr1 (319-436)||(1695706-1695824)
chr1 (319-436)||(4765087-4765205)
chr1 (333-427)||(18088082-18088176)
chr1 (316-436)||(4974820-4974941)
chr1 (350-423)||(15615407-15615480)
chr1 (350-427)||(20491950-20492027)
chr1 (338-423)||(32712182-32712267)
chr1 (332-425)||(45721472-45721565)
chr1 (311-436)||(41810718-41810844)
chr1 (335-424)||(4974899-4974988)
chr1 (335-427)||(29987415-29987507)
chr1 (335-427)||(41810802-41810894)
chr1 (350-430)||(43142822-43142902)
chr1 (335-418)||(4764900-4764983)
chr1 (335-430)||(20491717-20491812)
chr1 (335-436)||(29386099-29386202)
chr1 (322-436)||(29987465-29987580)
chr1 (332-423)||(42371721-42371812)
chr1 (333-427)||(4964918-4965012)
chr1 (335-427)||(3339149-3339240)
chr1 (338-436)||(18087995-18088095)
chr1 (350-430)||(29386294-29386374)
chr1 (339-430)||(29386354-29386445)
chr1 (334-436)||(43142875-43142978)
chr1 (335-430)||(45721204-45721299)
chr1 (350-436)||(49588031-49588118)
chr1 (338-427)||(1102812-1102902)
chr1 (316-436)||(4764820-4764942)
chr1 (333-419)||(47824476-47824561)
chr1 (350-423)||(29386175-29386248)
chr1 (338-427)||(42371407-42371496)
chr1 (369-430)||(43142662-43142723)
chr1 (337-425)||(1102617-1102705)
chr1 (351-427)||(15615282-15615358)
chr1 (335-427)||(39834065-39834157)
chr1 (335-423)||(48074352-48074440)
chr1 (327-436)||(5277299-5277410)
chr1 (331-414)||(41810951-41811033)
chr1 (337-423)||(1102677-1102763)
chr1 (337-427)||(29987280-29987370)
chr1 (350-427)||(39834202-39834280)
chr1 (335-424)||(4965060-4965149)
chr1 (350-423)||(43142703-43142776)
chr1 (350-423)||(49588091-49588164)
chr1 (335-427)||(18030268-18030359)
chr1 (320-392)||(41542710-41542782)
chr1 (372-427)||(48074119-48074174)
chr1 (337-423)||(4765041-4765127)
chr1 (315-436)||(18088271-18088392)
chr1 (335-392)||(38823709-38823766)
chr1 (319-423)||(41524609-41524711)
chr1 (351-423)||(18030544-18030616)
chr1 (336-427)||(49588310-49588401)
chr1 (350-417)||(18088231-18088298)
chr1 (351-436)||(15615219-15615308)
chr1 (374-416)||(42371668-42371710)
chr1 (383-427)||(49113141-49113185)
[»] scaffold0182 (4 HSPs)
scaffold0182 (315-427)||(23399-23511)
scaffold0182 (319-419)||(22447-22547)
scaffold0182 (335-436)||(22211-22313)
scaffold0182 (337-427)||(22379-22469)
[»] chr5 (64 HSPs)
chr5 (319-427)||(42091993-42092101)
chr5 (335-436)||(6642056-6642158)
chr5 (317-430)||(27319010-27319123)
chr5 (320-425)||(28571038-28571142)
chr5 (335-427)||(8942879-8942971)
chr5 (310-436)||(39804924-39805051)
chr5 (319-436)||(2803105-2803223)
chr5 (315-436)||(20429598-20429720)
chr5 (320-430)||(42092221-42092331)
chr5 (319-436)||(1069049-1069164)
chr5 (316-436)||(2802870-2802991)
chr5 (314-427)||(28574672-28574785)
chr5 (317-430)||(30003994-30004107)
chr5 (348-436)||(40807766-40807855)
chr5 (330-430)||(21250596-21250696)
chr5 (310-430)||(26006345-26006464)
chr5 (335-427)||(39805009-39805101)
chr5 (314-436)||(8943197-8943320)
chr5 (316-427)||(21250252-21250363)
chr5 (335-436)||(2796944-2797046)
chr5 (341-426)||(1069281-1069366)
chr5 (316-436)||(2796709-2796830)
chr5 (310-427)||(18008459-18008576)
chr5 (320-436)||(27495880-27495997)
chr5 (319-427)||(18008175-18008283)
chr5 (335-426)||(27318954-27319045)
chr5 (335-424)||(6642009-6642098)
chr5 (335-427)||(2802949-2803041)
chr5 (320-427)||(5361493-5361600)
chr5 (335-436)||(1737573-1737675)
chr5 (310-424)||(6641785-6641898)
chr5 (310-392)||(27318822-27318904)
chr5 (350-427)||(21250539-21250616)
chr5 (338-427)||(42092164-42092253)
chr5 (335-427)||(2796788-2796880)
chr5 (350-436)||(40807942-40808029)
chr5 (337-427)||(2803055-2803145)
chr5 (335-436)||(17849706-17849808)
chr5 (319-436)||(42375417-42375535)
chr5 (333-427)||(42375491-42375585)
chr5 (337-430)||(8943144-8943237)
chr5 (319-424)||(35171687-35171792)
chr5 (335-423)||(1737527-1737615)
chr5 (335-427)||(6641869-6641961)
chr5 (335-427)||(39805146-39805238)
chr5 (335-423)||(42375765-42375853)
chr5 (319-407)||(27496139-27496229)
chr5 (338-436)||(29440279-29440378)
chr5 (369-427)||(2796894-2796952)
chr5 (368-436)||(1069155-1069224)
chr5 (333-430)||(38085327-38085424)
chr5 (335-427)||(27496090-27496182)
chr5 (383-436)||(39805196-39805250)
chr5 (369-430)||(13626488-13626548)
chr5 (366-423)||(20429709-20429766)
chr5 (335-427)||(27495955-27496045)
chr5 (383-427)||(40807921-40807965)
chr5 (335-414)||(17849669-17849748)
chr5 (383-436)||(27496140-27496194)
chr5 (337-427)||(29440123-29440213)
chr5 (350-424)||(30004087-30004161)
chr5 (320-436)||(1737633-1737750)
chr5 (186-215)||(4552861-4552890)
chr5 (383-427)||(29440258-29440302)
[»] scaffold0062 (2 HSPs)
scaffold0062 (319-423)||(11714-11818)
scaffold0062 (335-423)||(11790-11878)
[»] scaffold0051 (4 HSPs)
scaffold0051 (319-419)||(60472-60572)
scaffold0051 (335-418)||(60729-60812)
scaffold0051 (350-407)||(60680-60737)
scaffold0051 (335-427)||(60548-60640)
[»] scaffold0220 (3 HSPs)
scaffold0220 (319-425)||(21813-21919)
scaffold0220 (314-436)||(22036-22159)
scaffold0220 (350-424)||(21989-22063)
[»] scaffold0121 (3 HSPs)
scaffold0121 (338-436)||(23915-24014)
scaffold0121 (315-427)||(23648-23760)
scaffold0121 (333-427)||(23865-23959)
[»] scaffold0179 (3 HSPs)
scaffold0179 (335-423)||(32252-32340)
scaffold0179 (350-436)||(32410-32495)
scaffold0179 (315-378)||(32201-32264)


Alignment Details
Target: chr8 (Bit Score: 97; Significance: 2e-47; HSPs: 103)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 29 - 226
Target Start/End: Original strand, 31603397 - 31603595
Alignment:
Q  29 tgagatgtataagaaaatggaacgaagaatcattggtcaaagcacaatagaaaaggatgctactcaggtcagccctgagactttgagtgtcatgggaaaa 128  Q
    |||| ||||||||||||| ||||| ||| |||||||||  |||||| ||| || |||||||||| ||||||| |||||||||  ||||||||||||||||    
T  31603397 tgagttgtataagaaaatagaacggagattcattggtcggagcacagtaggaa-ggatgctacttaggtcagtcctgagact--gagtgtcatgggaaaa 31603493  T
Q  129 gtaataaaatgatgtcgttctaactatttgaatattattctccttaca----nnnnnnncattgcaaaatcattaatgattctttcataatcaagattct 224  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||    
T  31603494 gtaattaaatgacgtcgttctaactatttgaatattattctccttacatttttttttttcattgcaaaatcattaatgattctttcataatcaagattct 31603593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 319 - 436
Target Start/End: Complemental strand, 23275528 - 23275410
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    ||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  23275528 caaatacctctctagatcctttaagtttaacgtttgtttcatataggtcctttaagtttctaaggtttcagatatgtcctttaagtttcgagtttgtttc 23275429  T
Q  419 ggataggt-ctttaagttt 436  Q
    |||||||| ||||||||||    
T  23275428 ggataggtcctttaagttt 23275410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 319 - 436
Target Start/End: Original strand, 23403686 - 23403804
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    ||||||||||||  ||||||||||||||||||||||||||| |||| |||||||||||||||| ||||| |||||| |||||||||||||||||||||||    
T  23403686 caaatacctctctagatcctttaagtttaacgtttgtttcaaataggtcctttaagtttctaaagtttcagatatgtcctttaagtttcgagtttgtttc 23403785  T
Q  419 ggataggt-ctttaagttt 436  Q
    |||||||| ||||||||||    
T  23403786 ggataggtcctttaagttt 23403804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 310 - 427
Target Start/End: Complemental strand, 27702714 - 27702597
Alignment:
Q  310 aaaaaaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcga 409  Q
    |||||||||||||||||||  ||  |||||||||||| | |||||||||| |||| |||||||||||||||||||||| |||| | ||||||||||||||    
T  27702714 aaaaaaggtcaaatacctccacgagtcctttaagtttcatgtttgtttcagatagctcctttaagtttctaaggtttcagataggtcctttaagtttcga 27702615  T
Q  410 gtttgtttcggataggtc 427  Q
    ||||||||||||| ||||    
T  27702614 gtttgtttcggatcggtc 27702597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 319 - 436
Target Start/End: Complemental strand, 24469575 - 24469457
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||| |||| |||||||| ||| | |||||||||| |||| |||||||||||||||||||||| |||| | ||||||||||| |||||||||||    
T  24469575 caaatacctccccgggtcctttaaatttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttggagtttgtttc 24469476  T
Q  419 ggataggt-ctttaagttt 436  Q
    |||||||| ||||||||||    
T  24469475 ggataggtcctttaagttt 24469457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 332 - 436
Target Start/End: Complemental strand, 9117868 - 9117763
Alignment:
Q  332 ggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-cttt 430  Q
    ||||||||||||||| || ||||||||| |||| ||||||||||||||||| |||| |||| | ||||||||||||||||||||||||||||||| ||||    
T  9117868 ggatcctttaagtttcacatttgtttcagataggtcctttaagtttctaagctttcagataagtcctttaagtttcgagtttgtttcggataggtccttt 9117769  T
Q  431 aagttt 436  Q
    ||||||    
T  9117768 aagttt 9117763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 309 - 436
Target Start/End: Original strand, 28463793 - 28463921
Alignment:
Q  309 taaaaaaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcg 408  Q
    ||||| |||||||||||||| |||  |||||||||||| | |||||||||| |||  |||||||||||||||||||||| |||| |  |||||||||| |    
T  28463793 taaaataggtcaaatacctccccgagtcctttaagtttcatgtttgtttcagataaatcctttaagtttctaaggtttcagataagtactttaagttttg 28463892  T
Q  409 agtttgtttcggataggt-ctttaagttt 436  Q
    |||||||||||||||||| ||||||||||    
T  28463893 agtttgtttcggataggtcctttaagttt 28463921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 315 - 427
Target Start/End: Original strand, 29218338 - 29218450
Alignment:
Q  315 aggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttg 414  Q
    |||||||||||||| | ||||||||||||||| | |||||||||| |||| |||||||||||| ||||||||| |||| | |||||||||||  ||||||    
T  29218338 aggtcaaatacctccctggatcctttaagtttcatgtttgtttcagatagatcctttaagtttttaaggtttcagataggtcctttaagtttgaagtttg 29218437  T
Q  415 tttcggataggtc 427  Q
    |||||||||||||    
T  29218438 tttcggataggtc 29218450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 309 - 424
Target Start/End: Original strand, 6121495 - 6121610
Alignment:
Q  309 taaaaaaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcg 408  Q
    ||||| ||| |||||||||| |||| |||||||||||| | |||||||| | |||| |||||||||||||||||||||| |||| |  ||||||||||||    
T  6121495 taaaataggccaaatacctccccgggtcctttaagtttcatgtttgttttagatagatcctttaagtttctaaggtttcagataggttctttaagtttcg 6121594  T
Q  409 agtttgtttcggatag 424  Q
    ||||||||||||||||    
T  6121595 agtttgtttcggatag 6121610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 319 - 436
Target Start/End: Original strand, 9117500 - 9117618
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||  |||| || ||||||||| | |||||||||| |||| |||||||||||||||||||||| |||| | ||||||||||||||||||||||     
T  9117500 caaataccttcccgggtcttttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttt 9117599  T
Q  419 ggataggt-ctttaagttt 436  Q
    |||||||| ||||||||||    
T  9117600 ggataggtcctttaagttt 9117618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 313 - 427
Target Start/End: Complemental strand, 23404193 - 23404079
Alignment:
Q  313 aaaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtt 412  Q
    |||||||||||| ||| |||| |||||||||||| | |||||| ||| |||| ||||||||||| |||||||||| ||||||  |||||| |||||||||    
T  23404193 aaaggtcaaatatctccccgggtcctttaagtttcatgtttgtctcagatagatcctttaagttactaaggtttcagatatgttctttaaatttcgagtt 23404094  T
Q  413 tgtttcggataggtc 427  Q
    |||||||||||||||    
T  23404093 tgtttcggataggtc 23404079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 319 - 436
Target Start/End: Original strand, 29276618 - 29276736
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||| | |||| |||||||||| | |||||||||| |||| |||||||||||||||||||||| |||| |  |||||||||||||||||||||     
T  29276618 caaatacctccctggattctttaagtttcatgtttgtttcagataggtcctttaagtttctaaggtttcagataggttctttaagtttcgagtttgtttt 29276717  T
Q  419 ggataggt-ctttaagttt 436  Q
    |||||||| ||||||||||    
T  29276718 ggataggtcctttaagttt 29276736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 319 - 436
Target Start/End: Original strand, 44728107 - 44728225
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    ||||||||||||| | |||||||||||| | |||||||||| |||| |||||||||||||||||||||| || | | |||||||||||| ||||| ||||    
T  44728107 caaatacctctccaggtcctttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagacaggtcctttaagtttcaagtttatttc 44728206  T
Q  419 ggataggt-ctttaagttt 436  Q
    |||||||| ||||||||||    
T  44728207 ggataggtcctttaagttt 44728225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 320 - 427
Target Start/End: Original strand, 22444603 - 22444710
Alignment:
Q  320 aaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcg 419  Q
    ||||||||| | || |||||||||||| |||||||||||  |||| |||||||||||||||| ||||| |||| |  |||||||||||||||||||||||    
T  22444603 aaatacctccctgggtcctttaagtttcacgtttgtttcggataggtcctttaagtttctaaagtttcagataggttctttaagtttcgagtttgtttcg 22444702  T
Q  420 gataggtc 427  Q
    ||||||||    
T  22444703 gataggtc 22444710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 315 - 436
Target Start/End: Original strand, 15315094 - 15315215
Alignment:
Q  315 aggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttg 414  Q
    |||||||||| ||| | || |||||||||||| |||||||||||| |||| |||||||| || |||||||||| |||| | ||||||||||||| |||||    
T  15315094 aggtcaaatatctccctgggtcctttaagtttcacgtttgtttcagataggtcctttaaatt-ctaaggtttcagataagtcctttaagtttcgtgtttg 15315192  T
Q  415 tttcggataggt-ctttaagttt 436  Q
    |||||||||||| ||||||||||    
T  15315193 tttcggataggtcctttaagttt 15315215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 315 - 436
Target Start/End: Original strand, 15495463 - 15495584
Alignment:
Q  315 aggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttg 414  Q
    |||||||||| ||| | || |||||||||||| |||||||||||| |||| |||||||| || |||||||||| |||| | ||||||||||||| |||||    
T  15495463 aggtcaaatatctccctgggtcctttaagtttcacgtttgtttcagataggtcctttaaatt-ctaaggtttcagataagtcctttaagtttcgtgtttg 15495561  T
Q  415 tttcggataggt-ctttaagttt 436  Q
    |||||||||||| ||||||||||    
T  15495562 tttcggataggtcctttaagttt 15495584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 335 - 436
Target Start/End: Complemental strand, 35435673 - 35435571
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaag 433  Q
    |||||||||||| | |||||||||| |||| |||||||||||||||||||||  |||| | |||||||||||||||||||||||||||| || |||||||    
T  35435673 tcctttaagtttcatgtttgtttcagatagatcctttaagtttctaaggttttagataggtcctttaagtttcgagtttgtttcggatatgtcctttaag 35435574  T
Q  434 ttt 436  Q
    |||    
T  35435573 ttt 35435571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 340 - 436
Target Start/End: Complemental strand, 4157931 - 4157834
Alignment:
Q  340 taagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaagttt 436  Q
    |||||||||||||||||||| |||| |||||||||||| ||||||||| ||||||  ||||||||||||||||||||| ||||| || ||||||||||    
T  4157931 taagtttaacgtttgtttcagataggtcctttaagtttttaaggtttcagatatgttctttaagtttcgagtttgtttgggatatgtcctttaagttt 4157834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 311 - 427
Target Start/End: Complemental strand, 1692287 - 1692171
Alignment:
Q  311 aaaaaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgag 410  Q
    |||||||||||||||||| |    |||||||| ||| || |||||| || |||| |||||||||||| ||||||||| |||||| |||||||||||||||    
T  1692287 aaaaaggtcaaatacctcccttagtcctttaaatttcacatttgttccaaataggtcctttaagtttataaggtttcagatatgtcctttaagtttcgag 1692188  T
Q  411 tttgtttcggataggtc 427  Q
    ||||||| |||||||||    
T  1692187 tttgttttggataggtc 1692171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 4157591 - 4157683
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||||| | |||| ||||| |||| |||||||||||||||||||||| |||| | ||||||||||| ||||||||||||||||||||    
T  4157591 tcctttaagtttcatgtttatttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttggagtttgtttcggataggtc 4157683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 6121957 - 6121849
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||||| || |||||||||||| |||||||||||| |||  |||||||||||||||||||||  |||| | | | |||||||||||||||||||    
T  6121957 caaatacctctctgggtcctttaagtttcacgtttgtttcagatatgtcctttaagtttctaaggttttagataggtcatataagtttcgagtttgtttc 6121858  T
Q  419 ggataggtc 427  Q
     ||||||||    
T  6121857 agataggtc 6121849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 335 - 423
Target Start/End: Original strand, 31826847 - 31826935
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    |||||||||||| |||||| ||| | |||| |||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  31826847 tcctttaagtttcacgtttattttagataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcggata 31826935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 314 - 436
Target Start/End: Original strand, 1043631 - 1043754
Alignment:
Q  314 aaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagttt 413  Q
    |||| |||||| ||| |||| |||||||||||| | |||||||||| |||| |||||||| |||||||||| || |||||| ||||||||||| ||||||    
T  1043631 aaggccaaatatctccccgggtcctttaagtttcatgtttgtttcaaatagatcctttaaatttctaaggtctcagatatgtcctttaagtttggagttt 1043730  T
Q  414 gtttcggataggtc-tttaagttt 436  Q
    ||||| |||| ||| |||||||||    
T  1043731 gtttcagatatgtcatttaagttt 1043754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 316 - 427
Target Start/End: Original strand, 38507057 - 38507168
Alignment:
Q  316 ggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgt 415  Q
    ||||||||| ||| ||||||||||||||||| | |||||| ||| |||| ||||||||||||||||| |||  |||| | | ||||||||||||||||||    
T  38507057 ggtcaaatagctccccggatcctttaagtttcatgtttgtctcagatagatcctttaagtttctaagattttagataggtcatttaagtttcgagtttgt 38507156  T
Q  416 ttcggataggtc 427  Q
    || |||||||||    
T  38507157 tttggataggtc 38507168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 335 - 436
Target Start/End: Complemental strand, 1044000 - 1043898
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaag 433  Q
    |||||||||||||||||||||||   |||  || ||||||||||||||||||| |||| | |||||||||||||||||||||||||||| || |||||||    
T  1044000 tcctttaagtttaacgtttgttttcgataagtcatttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcggatatgtcctttaag 1043901  T
Q  434 ttt 436  Q
    |||    
T  1043900 ttt 1043898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 337 - 427
Target Start/End: Original strand, 2250724 - 2250814
Alignment:
Q  337 ctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||| | |||||||| ||| || |||||||||||| ||||||||| |||| | ||||||||||||||||||||||||||||||||    
T  2250724 ctttaagtttcatgtttgttttatacaggtcctttaagtttttaaggtttcagataagtcctttaagtttcgagtttgtttcggataggtc 2250814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 315 - 436
Target Start/End: Original strand, 29457112 - 29457234
Alignment:
Q  315 aggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttg 414  Q
    ||||||||||| || |||  |||||||||||| | |||||||||| |||| || |||||||||||||| |||| |||| |  ||||||||||||||||||    
T  29457112 aggtcaaatacatccccgagtcctttaagtttcatgtttgtttcagataggtcttttaagtttctaagatttcagataggttctttaagtttcgagtttg 29457211  T
Q  415 tttcggataggt-ctttaagttt 436  Q
    ||||||||| || ||||||||||    
T  29457212 tttcggatatgtcctttaagttt 29457234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 310 - 427
Target Start/End: Complemental strand, 2251167 - 2251050
Alignment:
Q  310 aaaaaaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcga 409  Q
    |||| ||| |||||||||| | |  |||||||||||| |||||||||||| |||| |||||||||||||||| ||||| |||| | | |||| |||||||    
T  2251167 aaaataggccaaatacctccctgagtcctttaagttttacgtttgtttcagataggtcctttaagtttctaaagtttcagataagtcatttacgtttcga 2251068  T
Q  410 gtttgtttcggataggtc 427  Q
    ||||||||| ||||||||    
T  2251067 gtttgtttcagataggtc 2251050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 314 - 422
Target Start/End: Original strand, 22780053 - 22780159
Alignment:
Q  314 aaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagttt 413  Q
    ||||||||||||||| |||| || ||||||||| | |||||||||| |||| |||||||||||||||||||||| |||| | |  |||||||| ||||||    
T  22780053 aaggtcaaatacctccccgggtcatttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtc--ttaagtttggagttt 22780150  T
Q  414 gtttcggat 422  Q
    |||||||||    
T  22780151 gtttcggat 22780159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 2257068 - 2257160
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||||| |||||||||||| |||| |||||||||||||||| ||||| |||| | | |||| |||||||||||||||| ||||||||    
T  2257068 tcctttaagttttacgtttgtttcagataggtcctttaagtttctaaagtttcagataagtcatttacgtttcgagtttgtttcagataggtc 2257160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 9117576 - 9117668
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||   ||||||||   |||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||    
T  9117576 tcctttaagtttcgagtttgttttggataggtcctttaagtttctaaggtttcagatatgtcctttaagtttcgagtttgtttcagataggtc 9117668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 319 - 430
Target Start/End: Original strand, 15300579 - 15300691
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttccttt-aagtttctaaggtttcggatatgccctttaagtttcgagtttgttt 417  Q
    |||||||||| | || | |||||||||| | |||||||||| |||| |||||| |||||||||| ||||  |||| | ||||||||||||||||||||||    
T  15300579 caaatacctcgctgggttctttaagtttcatgtttgtttcagataggtccttttaagtttctaaagttttagataggtcctttaagtttcgagtttgttt 15300678  T
Q  418 cggataggtcttt 430  Q
    |||||||||||||    
T  15300679 cggataggtcttt 15300691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 319 - 430
Target Start/End: Original strand, 15480948 - 15481060
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttccttt-aagtttctaaggtttcggatatgccctttaagtttcgagtttgttt 417  Q
    |||||||||| | || | |||||||||| | |||||||||| |||| |||||| |||||||||| ||||  |||| | ||||||||||||||||||||||    
T  15480948 caaatacctcgctgggttctttaagtttcatgtttgtttcagataggtccttttaagtttctaaagttttagataggtcctttaagtttcgagtttgttt 15481047  T
Q  418 cggataggtcttt 430  Q
    |||||||||||||    
T  15481048 cggataggtcttt 15481060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 337 - 436
Target Start/End: Complemental strand, 15891932 - 15891832
Alignment:
Q  337 ctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaagtt 435  Q
    ||||||||||||| ||||||||| |||  |||||||||||||||||||||| |||| | |||||||||||  |||||||||| ||||||| |||||||||    
T  15891932 ctttaagtttaacatttgtttcagatacgtcctttaagtttctaaggtttcagataggtcctttaagtttgaagtttgtttcagataggtcctttaagtt 15891833  T
Q  436 t 436  Q
    |    
T  15891832 t 15891832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 23403823 - 23403915
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||   |||||||||  |||| |||||||||||||||||||||| |||| | ||||||||||||||||||||||| ||||||||    
T  23403823 tcctttaagtttcgagtttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtc 23403915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 24043805 - 24043897
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||||| | |||||||||  |||| ||||||||||||||||||||||  ||| | ||||||||||||||||||||||| ||||||||    
T  24043805 tcctttaagtttgaagtttgtttcggataggtcctttaagtttctaaggtttcaaataggtcctttaagtttcgagtttgtttcagataggtc 24043897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 31618371 - 31618463
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||||| |||||||||||| |||| |||||||| |||||||||||||  ||| | |||||||||||||||||||||| | |||||||    
T  31618371 tcctttaagtttcacgtttgtttcagataggtcctttaaatttctaaggtttcaaataagtcctttaagtttcgagtttgtttggaataggtc 31618463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 315 - 427
Target Start/End: Original strand, 42691890 - 42692002
Alignment:
Q  315 aggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttg 414  Q
    |||||||||||||| | || || ||||||||| |||| ||||| | |||| |||||||||||||||||||||  |||| | |||||||||||||||||||    
T  42691890 aggtcaaatacctcactgggtcatttaagtttcacgtctgttttaaatagatcctttaagtttctaaggttttagataggtcctttaagtttcgagtttg 42691989  T
Q  415 tttcggataggtc 427  Q
    |||  ||||||||    
T  42691990 ttttagataggtc 42692002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 335 - 430
Target Start/End: Original strand, 1043712 - 1043807
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtcttt 430  Q
    ||||||||||||   |||||||||| |||  || ||||||||||||||||||| |||| | ||||||||||||||||||||||| |||||||||||    
T  1043712 tcctttaagtttggagtttgtttcagatatgtcatttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtcttt 1043807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 335 - 436
Target Start/End: Original strand, 23403762 - 23403865
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaagg-tttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaa 432  Q
    ||||||||||||   |||||||||  |||| |||||||||||||||||| |||| |||| | ||||||||||||||||||||||||||||||| ||||||    
T  23403762 tcctttaagtttcgagtttgtttcggataggtcctttaagtttctaaggttttcagataggtcctttaagtttcgagtttgtttcggataggtcctttaa 23403861  T
Q  433 gttt 436  Q
    ||||    
T  23403862 gttt 23403865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 335 - 436
Target Start/End: Original strand, 24043745 - 24043847
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaag 433  Q
    |||||||||||| | |||||||||| |||| |||||||||||| ||||||||  |||| | |||||||||||  |||||||||||||||||| |||||||    
T  24043745 tcctttaagtttcatgtttgtttcagatagatcctttaagtttttaaggttttagataggtcctttaagtttgaagtttgtttcggataggtcctttaag 24043844  T
Q  434 ttt 436  Q
    |||    
T  24043845 ttt 24043847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 335 - 424
Target Start/End: Complemental strand, 9779228 - 9779139
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggatag 424  Q
    |||||||||||| | |||||||| | |||| |||||||||||| ||||||||| |||| | ||||||||||||||||||||||| |||||    
T  9779228 tcctttaagtttcatgtttgttttagataggtcctttaagtttttaaggtttcagataggtcctttaagtttcgagtttgtttcagatag 9779139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 335 - 427
Target Start/End: Complemental strand, 2257488 - 2257396
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||||| | |||||||| ||| || ||||||||| || ||||||||| |||| | ||||| ||||||||||||||||||||||||||    
T  2257488 tcctttaagtttcatgtttgttttatacaggtcctttaagcttttaaggtttcagataagtcctttcagtttcgagtttgtttcggataggtc 2257396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 15315173 - 15315265
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||   |||||||||  |||| |||||||||||||||||||||| |||| | | |||||||||||||||| |||||||||||||    
T  15315173 tcctttaagtttcgtgtttgtttcggataggtcctttaagtttctaaggtttcagataggtcatttaagtttcgagtttatttcggataggtc 15315265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 15495542 - 15495634
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||   |||||||||  |||| |||||||||||||||||||||| |||| | | |||||||||||||||| |||||||||||||    
T  15495542 tcctttaagtttcgtgtttgtttcggataggtcctttaagtttctaaggtttcagataggtcatttaagtttcgagtttatttcggataggtc 15495634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 335 - 423
Target Start/End: Original strand, 15891645 - 15891733
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    |||||||||||| | |||||||||| |||| |||||||||||||||||||||  ||||   ||||||||||||||||||||||| ||||    
T  15891645 tcctttaagtttgaagtttgtttcagataggtcctttaagtttctaaggttttagatagatcctttaagtttcgagtttgtttcagata 15891733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 335 - 423
Target Start/End: Complemental strand, 15891874 - 15891786
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    |||||||||||| | |||||||||| |||| |||||||||||||||||||||  ||||   ||||||||||||||||||||||| ||||    
T  15891874 tcctttaagtttgaagtttgtttcagataggtcctttaagtttctaaggttttagatagatcctttaagtttcgagtttgtttcagata 15891786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 335 - 427
Target Start/End: Complemental strand, 23275452 - 23275360
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||   |||||||||  |||| |||||||||||||||||||||| |||| | | ||||||||||||||||||||| ||||||||    
T  23275452 tcctttaagtttcgagtttgtttcggataggtcctttaagtttctaaggtttcagataggtcatttaagtttcgagtttgtttcagataggtc 23275360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 335 - 426
Target Start/End: Complemental strand, 15300955 - 15300864
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt 426  Q
    ||||||||||||   |||||||||  ||||||| ||||||||||||||||||| |||| | ||||||||||| ||||||||||| |||||||    
T  15300955 tcctttaagtttcgagtttgtttcggatagttcatttaagtttctaaggtttcagataggtcctttaagttttgagtttgtttcagataggt 15300864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 330 - 436
Target Start/End: Complemental strand, 15315467 - 15315360
Alignment:
Q  330 ccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ct 428  Q
    |||| |||||||||| | | |||||||||| |||| |||||||||||| ||||||||| |||| | | ||||||||||||||||||| |||||| || ||    
T  15315467 ccgggtcctttaagtatcatgtttgtttcagatagatcctttaagtttttaaggtttcagataggtcttttaagtttcgagtttgttacggataagtcct 15315368  T
Q  429 ttaagttt 436  Q
    ||||||||    
T  15315367 ttaagttt 15315360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 335 - 426
Target Start/End: Complemental strand, 15481324 - 15481233
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt 426  Q
    ||||||||||||   |||||||||  ||||||| ||||||||||||||||||| |||| | ||||||||||| ||||||||||| |||||||    
T  15481324 tcctttaagtttcgagtttgtttcggatagttcatttaagtttctaaggtttcagataggtcctttaagttttgagtttgtttcagataggt 15481233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 330 - 436
Target Start/End: Complemental strand, 15495836 - 15495729
Alignment:
Q  330 ccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ct 428  Q
    |||| |||||||||| | | |||||||||| |||| |||||||||||| ||||||||| |||| | | ||||||||||||||||||| |||||| || ||    
T  15495836 ccgggtcctttaagtatcatgtttgtttcagatagatcctttaagtttttaaggtttcagataggtcttttaagtttcgagtttgttacggataagtcct 15495737  T
Q  429 ttaagttt 436  Q
    ||||||||    
T  15495736 ttaagttt 15495729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 337 - 423
Target Start/End: Complemental strand, 22444975 - 22444889
Alignment:
Q  337 ctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    ||||||||||   |||||||||  |||| |||||||||||||||||||||| |||| | ||||||||||||||||||||||| ||||    
T  22444975 ctttaagttttgagtttgtttcggataggtcctttaagtttctaaggtttcagataagtcctttaagtttcgagtttgtttcagata 22444889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 315 - 436
Target Start/End: Complemental strand, 22445057 - 22444935
Alignment:
Q  315 aggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttg 414  Q
    |||||||||||||| || | | |||||||||| | |||||||||| |||  |||||||||||||||||||||   ||  |  |||||||||| |||||||    
T  22445057 aggtcaaatacctccccaggttctttaagtttcatgtttgtttcagataaatcctttaagtttctaaggtttaacatgggttctttaagttttgagtttg 22444958  T
Q  415 tttcggataggt-ctttaagttt 436  Q
    |||||||||||| ||||||||||    
T  22444957 tttcggataggtcctttaagttt 22444935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 333 - 423
Target Start/End: Complemental strand, 44318513 - 44318423
Alignment:
Q  333 gatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    |||| ||||||||| | |||||||||  |||| |||||||| ||||||||||||| |||| | ||||||||||||||||||||||| ||||    
T  44318513 gatcttttaagtttgaagtttgtttcggataggtcctttaaatttctaaggtttcagataggtcctttaagtttcgagtttgtttcagata 44318423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 7209 - 7148
Alignment:
Q  366 tcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||||||||||||||| |||| | ||||||||||||||||||||||| ||||||||    
T  7209 tcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtc 7148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 320 - 436
Target Start/End: Complemental strand, 31827258 - 31827142
Alignment:
Q  320 aaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcg 419  Q
    |||||| || || ||| |||||||||| | |||||||||| |||| |  ||||||||||||||||||| |||| | ||||||||||| |||||||||| |    
T  31827258 aaatacatccccagatactttaagtttcatgtttgtttcagatagattttttaagtttctaaggtttcagataggtcctttaagttttgagtttgttt-g 31827160  T
Q  420 gataggt-ctttaagttt 436  Q
    ||||||| ||||||||||    
T  31827159 gataggtcctttaagttt 31827142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 314 - 418
Target Start/End: Original strand, 6930 - 7034
Alignment:
Q  314 aaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagttt 413  Q
    |||||||| | |||| || |||||||||||||| | |||||||||| |||  || |||||||||||||||||||  ||| | | ||||||||||||||||    
T  6930 aaggtcaagtgcctccccagatcctttaagtttcatgtttgtttcagatatatcttttaagtttctaaggtttcaaataagtcatttaagtttcgagttt 7029  T
Q  414 gtttc 418  Q
    |||||    
T  7030 gtttc 7034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 427
Target Start/End: Complemental strand, 9117805 - 9117713
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||   |||||||||  |||| |||||||||||||||||||||| |||| | |||||| |||||||||||||||| | ||||||    
T  9117805 tcctttaagtttcgagtttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttaggtttcgagtttgtttcagttaggtc 9117713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 361 - 436
Target Start/End: Complemental strand, 15300989 - 15300913
Alignment:
Q  361 atagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc-tttaagttt 436  Q
    |||| |||||||||||||||| ||||| |||| | ||||||||||||||||||||||||||||| || |||||||||    
T  15300989 atagatcctttaagtttctaaagtttcagataggtcctttaagtttcgagtttgtttcggatagttcatttaagttt 15300913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 361 - 436
Target Start/End: Complemental strand, 15481358 - 15481282
Alignment:
Q  361 atagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc-tttaagttt 436  Q
    |||| |||||||||||||||| ||||| |||| | ||||||||||||||||||||||||||||| || |||||||||    
T  15481358 atagatcctttaagtttctaaagtttcagataggtcctttaagtttcgagtttgtttcggatagttcatttaagttt 15481282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 351 - 423
Target Start/End: Original strand, 35435401 - 35435473
Alignment:
Q  351 tttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    ||||||||| |||| || ||||||||||||||||||| |||| | ||||||||||||||||||||||| ||||    
T  35435401 tttgtttcagatagatcttttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagata 35435473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 315 - 407
Target Start/End: Complemental strand, 38507384 - 38507292
Alignment:
Q  315 aggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttc 407  Q
    |||||||||| |||   |||||||||||||||||||||||||| | |||| || ||||||||||||||||||| |||| |  |||||||||||    
T  38507384 aggtcaaatatctccttggatcctttaagtttaacgtttgttttaaataggtcgtttaagtttctaaggtttcagataggttctttaagtttc 38507292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 337 - 428
Target Start/End: Complemental strand, 11482706 - 11482616
Alignment:
Q  337 ctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtct 428  Q
    |||||||||| | |||||||||| |||| | |||||||||| ||||||| | |||| | ||||||||||||||||||||||| |||||||||    
T  11482706 ctttaagtttcaagtttgtttcagataggttctttaagtttttaaggtt-cagataagtcctttaagtttcgagtttgtttcagataggtct 11482616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 312 - 407
Target Start/End: Complemental strand, 29276995 - 29276900
Alignment:
Q  312 aaaaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttc 407  Q
    |||||| |||||||||| | || |||||||||||| |||||| ||||| |||  |||||||||||||||||||||| ||||   ||||||||||||    
T  29276995 aaaaggccaaatacctccctgggtcctttaagttttacgtttatttcagatatgtcctttaagtttctaaggtttcagatagatcctttaagtttc 29276900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 369 - 427
Target Start/End: Original strand, 9779033 - 9779091
Alignment:
Q  369 tttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||||||||| |||| | ||||||||||||||||||||||| ||||||||    
T  9779033 tttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtc 9779091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 436
Target Start/End: Original strand, 15891585 - 15891687
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaag 433  Q
    |||||||||||| |  ||||||||| |||| ||||| |||||||||||||||| || | | |||||||||||  |||||||||| ||||||| |||||||    
T  15891585 tcctttaagtttcatatttgtttcagatagatccttaaagtttctaaggtttcagacaggtcctttaagtttgaagtttgtttcagataggtcctttaag 15891684  T
Q  434 ttt 436  Q
    |||    
T  15891685 ttt 15891687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 424
Target Start/End: Complemental strand, 44728495 - 44728389
Alignment:
Q  318 tcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgttt 417  Q
    |||||||||||   || || ||||||||| |||||||||||| | |  |||||||||||| ||||||||| ||||    |||||||||||||||||||||    
T  44728495 tcaaatacctcaatgggtcatttaagtttcacgtttgtttcagacaagtcctttaagtttttaaggtttcagatagattctttaagtttcgagtttgttt 44728396  T
Q  418 cggatag 424  Q
    |||||||    
T  44728395 cggatag 44728389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 430
Target Start/End: Original strand, 35435327 - 35435420
Alignment:
Q  337 ctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtcttt 430  Q
    |||||| ||| |||||| ||||| || | || ||||||||||||||||||| |||| | |||||||||||||| |||||||| ||||| |||||    
T  35435327 ctttaaatttcacgtttatttcagatgggtcttttaagtttctaaggtttcagataggtcctttaagtttcgaatttgtttcagatagatcttt 35435420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 318 - 427
Target Start/End: Complemental strand, 44318588 - 44318479
Alignment:
Q  318 tcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgttt 417  Q
    ||||||||||| |||  | |||||||||| | ||||| |||| |||| |||||||||||||||| ||||| ||||   | |||||||||  |||||||||    
T  44318588 tcaaatacctccccgcgttctttaagtttcatgtttgcttcaaatagatcctttaagtttctaatgtttcagatagatcttttaagtttgaagtttgttt 44318489  T
Q  418 cggataggtc 427  Q
    ||||||||||    
T  44318488 cggataggtc 44318479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 366 - 436
Target Start/End: Complemental strand, 7269 - 7198
Alignment:
Q  366 tcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaagttt 436  Q
    ||||||||||||||||||||||  ||| | |||||||||||||||||||||| ||||| || ||||||||||    
T  7269 tcctttaagtttctaaggtttcaaataggtcctttaagtttcgagtttgttttggatatgtcctttaagttt 7198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 418
Target Start/End: Complemental strand, 31618787 - 31618708
Alignment:
Q  340 taagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatg-ccctttaagtttcgagtttgtttc 418  Q
    ||||||| | |||||||||| |||| ||||||||||||||||||||||  ||| | || |||||||||||||||||||||    
T  31618787 taagtttcaagtttgtttcagatagatcctttaagtttctaaggtttcaaataggtccttttaagtttcgagtttgtttc 31618708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 369 - 427
Target Start/End: Complemental strand, 29276878 - 29276820
Alignment:
Q  369 tttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||| ||||| |||||| ||||||||||| ||||||||||| ||||||||    
T  29276878 tttaagtttctaaagtttcagatatgtcctttaagttttgagtttgtttcagataggtc 29276820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 427
Target Start/End: Original strand, 7026 - 7103
Alignment:
Q  350 gtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||| ||| | | |||||||||||||||||||  ||| | | ||||||||||||||||||||| ||||||||    
T  7026 gtttgtttcaaatattccatttaagtttctaaggtttcacataagtcatttaagtttcgagtttgtttcagataggtc 7103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 423
Target Start/End: Original strand, 1691932 - 1691989
Alignment:
Q  366 tcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    |||||||||||||||||||||| |||| | | ||||||||||||||||||||| ||||    
T  1691932 tcctttaagtttctaaggtttcagataggtcatttaagtttcgagtttgtttcagata 1691989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 430
Target Start/End: Original strand, 9778965 - 9779034
Alignment:
Q  361 atagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtcttt 430  Q
    |||| |||||||||||||||| ||||| |||| |  |||||||||| |||||||||||||||| ||||||    
T  9778965 atagatcctttaagtttctaaagtttcagataagttctttaagttttgagtttgtttcggatatgtcttt 9779034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 423
Target Start/End: Complemental strand, 15315371 - 15315314
Alignment:
Q  366 tcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    |||||||||||||||||||||| |||| | |||||||||||| |||||||||| ||||    
T  15315371 tcctttaagtttctaaggtttcagataggtcctttaagtttcaagtttgtttcagata 15315314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 423
Target Start/End: Complemental strand, 15495740 - 15495683
Alignment:
Q  366 tcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    |||||||||||||||||||||| |||| | |||||||||||| |||||||||| ||||    
T  15495740 tcctttaagtttctaaggtttcagataggtcctttaagtttcaagtttgtttcagata 15495683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 335 - 424
Target Start/End: Original strand, 29218418 - 29218507
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggatag 424  Q
    |||||||||||| | |||||||||  |||| |||||||| ||| ||||||||   ||| | ||||||||||||||||||||||| |||||    
T  29218418 tcctttaagtttgaagtttgtttcggataggtcctttaaatttttaaggttttatataggtcctttaagtttcgagtttgtttcagatag 29218507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 29276720 - 29276773
Alignment:
Q  361 atagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttg 414  Q
    |||| |||||||||||||||||||||| |||| | |||||||||||||||||||    
T  29276720 ataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttg 29276773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 427
Target Start/End: Complemental strand, 31618716 - 31618639
Alignment:
Q  350 gtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||| || | |||||||||||||||| ||||  |||| | ||||||||||||||||||||||| | ||||||    
T  31618716 gtttgtttcaaatgggtcctttaagtttctaaagttttagataagtcctttaagtttcgagtttgtttccggtaggtc 31618639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 418
Target Start/End: Complemental strand, 31827158 - 31827101
Alignment:
Q  361 atagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||| |||||||||||||||||||||| |||| | |||||||||||||||||| ||||    
T  31827158 ataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttatttc 31827101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 426
Target Start/End: Original strand, 27702355 - 27702431
Alignment:
Q  350 gtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt 426  Q
    |||||||||| |||| || ||||||||| ||||||||| ||||   ||||||||||| ||||||| |||||||||||    
T  27702355 gtttgtttcacatagctcttttaagtttttaaggtttcagatagatcctttaagttttgagtttggttcggataggt 27702431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 417
Target Start/End: Original strand, 27702398 - 27702482
Alignment:
Q  333 gatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgttt 417  Q
    ||||||||||||||   ||||| |||  |||| | ||||| |||||||||||||| |||| | ||||||||||||||||||||||    
T  27702398 gatcctttaagttttgagtttggttcggataggtactttatgtttctaaggtttcagataggtcctttaagtttcgagtttgttt 27702482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 425
Target Start/End: Original strand, 28463881 - 28463969
Alignment:
Q  337 ctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggatagg 425  Q
    ||||||||||   |||||||||  |||| |||||||||||||||||||||  |||| | | |||||||||||||||| |||| ||||||    
T  28463881 ctttaagttttgagtttgtttcggataggtcctttaagtttctaaggttttagataggtcttttaagtttcgagtttatttcagatagg 28463969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 427
Target Start/End: Complemental strand, 35435613 - 35435521
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||   |||||||||  |||  |||||||||||||||| ||||| ||||   ||||||| ||||||||||||||| ||||||||    
T  35435613 tcctttaagtttcgagtttgtttcggatatgtcctttaagtttctaatgtttcagatagatcctttaattttcgagtttgtttcagataggtc 35435521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 368 - 423
Target Start/End: Original strand, 1691874 - 1691929
Alignment:
Q  368 ctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    |||||||||||||||||||||||||   |||||||||||||||||| ||| |||||    
T  1691874 ctttaagtttctaaggtttcggatagatcctttaagtttcgagtttattttggata 1691929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #88
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 335 - 418
Target Start/End: Original strand, 42620470 - 42620553
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||| ||| |||||||||||| |||  |||||||||||| |||| |||| |||| | ||||||| |||| ||||||||||    
T  42620470 tcctttaaattttacgtttgtttcagatatgtcctttaagtttttaagatttcagataagtcctttaaatttcaagtttgtttc 42620553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #89
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 417
Target Start/End: Complemental strand, 24469499 - 24469418
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgttt 417  Q
    ||||||||||||   |||||||||  |||| |||||||||||| ||||||||| ||||||  ||||||||||| |||||||||    
T  24469499 tcctttaagtttggagtttgtttcggataggtcctttaagtttttaaggtttcagatatg-tctttaagtttcaagtttgttt 24469418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #90
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 368 - 417
Target Start/End: Complemental strand, 42692106 - 42692057
Alignment:
Q  368 ctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgttt 417  Q
    |||||||||||||||||||| |||| | | ||||||||||||||||||||    
T  42692106 ctttaagtttctaaggtttcagataggtcttttaagtttcgagtttgttt 42692057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #91
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 2250782 - 2250874
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||   |||||||||  |||| |||| ||||||||||||||||  |||  | | |||||||||||||||||| || ||||||||    
T  2250782 tcctttaagtttcgagtttgtttcggataggtcctgtaagtttctaaggttttagatcggtcatttaagtttcgagtttgtatcagataggtc 2250874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #92
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 417
Target Start/End: Complemental strand, 1043940 - 1043858
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgttt 417  Q
    ||||||||||||   |||||||||  |||  ||||||||||||||||| |||  ||||  || ||||||||||||||||||||    
T  1043940 tcctttaagtttcgagtttgtttcggatatgtcctttaagtttctaagattttagatagaccttttaagtttcgagtttgttt 1043858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #93
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 417
Target Start/End: Original strand, 4157651 - 4157733
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgttt 417  Q
    ||||||||||||   |||||||||  |||| |||||||| ||||||||||||  ||||   ||| ||||||||||||||||||    
T  4157651 tcctttaagtttggagtttgtttcggataggtcctttaaatttctaaggtttaagatagatcctataagtttcgagtttgttt 4157733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #94
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 427
Target Start/End: Original strand, 6121583 - 6121673
Alignment:
Q  337 ctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||   |||||||||  |||| |||||| ||||| | |||||||||| |   ||||||||||| ||||||||||| ||||||||    
T  6121583 ctttaagtttcgagtttgtttcggatagatcctttgagtttgttaggtttcggagagatcctttaagttttgagtttgtttcagataggtc 6121673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #95
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 436
Target Start/End: Complemental strand, 22780308 - 22780270
Alignment:
Q  398 tttaagtttcgagtttgtttcggataggtctttaagttt 436  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  22780308 tttaagtttcgagtttgtttcggatagatttttaagttt 22780270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #96
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 430
Target Start/End: Original strand, 29457194 - 29457288
Alignment:
Q  337 ctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaag-tttcgagtttgtttcggataggtcttt 430  Q
    ||||||||||   |||||||||  |||  |||||||||||||||||||||| ||||   |||||||| |||| ||||||||||  ||||||||||    
T  29457194 ctttaagtttcgagtttgtttcggatatgtcctttaagtttctaaggtttcagatagatcctttaagttttcaagtttgtttcatataggtcttt 29457288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #97
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 423
Target Start/End: Original strand, 38507171 - 38507225
Alignment:
Q  369 tttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    ||||| ||||||||||||| ||||   ||||||||||||||||||||||| ||||    
T  38507171 tttaaatttctaaggtttcagatagatcctttaagtttcgagtttgtttcagata 38507225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #98
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 423
Target Start/End: Complemental strand, 35236856 - 35236799
Alignment:
Q  366 tcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    ||||||||||||||||||||||  ||| | | |||||||||| ||||| |||||||||    
T  35236856 tcctttaagtttctaaggtttcaaataggtcatttaagtttcaagtttatttcggata 35236799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #99
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 430
Target Start/End: Original strand, 38169776 - 38169809
Alignment:
Q  397 ctttaagtttcgagtttgtttcggataggtcttt 430  Q
    |||||||||||||||||||||||||||| |||||    
T  38169776 ctttaagtttcgagtttgtttcggatagatcttt 38169809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #100
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 4157845 - 4157788
Alignment:
Q  366 tcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||||||||||||||| ||||||    | ||||||| |||||||||| ||||||||    
T  4157845 tcctttaagtttctaaggtttcagatatg----tcaagtttcaagtttgtttcagataggtc 4157788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #101
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 436
Target Start/End: Complemental strand, 11482734 - 11482666
Alignment:
Q  369 tttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggatagg-tctttaagttt 436  Q
    ||||||||| ||||||||  |||| |  ||||||||||| |||||||||| |||||| |||||||||||    
T  11482734 tttaagtttttaaggttttagataagttctttaagtttcaagtttgtttcagataggttctttaagttt 11482666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #102
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 423
Target Start/End: Complemental strand, 27702629 - 27702541
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    ||||||||||||   |||||||||  || | |||||||| ||||||||| ||| |||| | | ||||||||| ||||||||||| ||||    
T  27702629 tcctttaagtttcgagtttgtttcggatcggtcctttaaatttctaaggcttcagataggtcttttaagtttggagtttgtttcagata 27702541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #103
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 387
Target Start/End: Complemental strand, 42692224 - 42692149
Alignment:
Q  311 aaaaaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttc 387  Q
    ||||||||||||||  ||||||| |||||||| ||| | |||| ||||| |||| || ||||||||| |||||||||    
T  42692224 aaaaaggtcaaataattctccgggtcctttaaatttcatgttt-tttcagatagatcttttaagtttataaggtttc 42692149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 3e-36; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 312 - 436
Target Start/End: Original strand, 5985767 - 5985892
Alignment:
Q  312 aaaaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagt 411  Q
    ||||||||||||||||| | || |||||||||||| |||||||||||| |||| |||||||||||||||||||||| |||||| |||||||||||  |||    
T  5985767 aaaaggtcaaatacctccctgggtcctttaagtttcacgtttgtttcagatagatcctttaagtttctaaggtttcagatatgtcctttaagttttaagt 5985866  T
Q  412 ttgtttcggataggt-ctttaagttt 436  Q
    ||||||||||||||| ||||||||||    
T  5985867 ttgtttcggataggtcctttaagttt 5985892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 314 - 436
Target Start/End: Original strand, 29134904 - 29135026
Alignment:
Q  314 aaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagttt 413  Q
    |||| ||||||||| ||||| |||||||||||| | |||||||||| |||| |||||||||||| |||||||||  ||||| ||||||||||||||||||    
T  29134904 aaggccaaatacct-tccgggtcctttaagtttcatgtttgtttcagatagatcctttaagtttttaaggtttcaaatatgtcctttaagtttcgagttt 29135002  T
Q  414 gtttcggataggt-ctttaagttt 436  Q
    ||||||||||| | ||||||||||    
T  29135003 gtttcggatagatcctttaagttt 29135026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 335 - 436
Target Start/End: Original strand, 4799331 - 4799433
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc-tttaag 433  Q
    |||||||||||| |||||||||||| |||| |||||||||||||||| ||||| |||||| ||||||||||| |||||||||||||||| ||| ||||||    
T  4799331 tcctttaagtttcacgtttgtttcagatagatcctttaagtttctaaagtttcagatatgtcctttaagttttgagtttgtttcggatatgtcatttaag 4799430  T
Q  434 ttt 436  Q
    |||    
T  4799431 ttt 4799433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 335 - 427
Target Start/End: Complemental strand, 24012600 - 24012508
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||||| |||||||||||| |||| |||||||||||||||||||||| |||| | ||||||| ||||||||||||||| ||||||||    
T  24012600 tcctttaagtttcacgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaaatttcgagtttgtttcagataggtc 24012508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 319 - 424
Target Start/End: Complemental strand, 9049865 - 9049760
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    ||||||| ||| ||| |||||||||||| | |||||||||| |||| ||||||||||||||||||||||||||| | ||||||| |||||| ||||||||    
T  9049865 caaatacatcttcgggtcctttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcggataggtcctttaaatttcgaatttgtttc 9049766  T
Q  419 ggatag 424  Q
     |||||    
T  9049765 agatag 9049760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 327 - 423
Target Start/End: Complemental strand, 33041097 - 33041001
Alignment:
Q  327 tctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    |||| ||||||||||||||| |||||||||||| |||| |||||||||||| ||||||||| |||| | |||||||||||  |||||||||||||||    
T  33041097 tctctggatcctttaagtttcacgtttgtttcagataggtcctttaagtttgtaaggtttcagataggtcctttaagtttgaagtttgtttcggata 33041001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 314 - 436
Target Start/End: Original strand, 14942244 - 14942367
Alignment:
Q  314 aaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagttt 413  Q
    |||| |||||||||||  || |||||||||||| |||||||||| | |||| |||||||| ||||||||||||| |||| | |||||||| |||||||||    
T  14942244 aaggccaaatacctctttgggtcctttaagtttcacgtttgttttagatagatcctttaaatttctaaggtttcagataggtcctttaagattcgagttt 14942343  T
Q  414 gtttcggataggt-ctttaagttt 436  Q
    |||||| ||| || ||||||||||    
T  14942344 gtttcgtatatgtcctttaagttt 14942367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 5985850 - 5985942
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||||| | |||||||||  |||| |||||||||||||||||||||| |||| | ||||||||||||||||| ||||| ||||||||    
T  5985850 tcctttaagttttaagtttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagttggtttcagataggtc 5985942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 333 - 427
Target Start/End: Original strand, 7858636 - 7858730
Alignment:
Q  333 gatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||||||| | |||||||||  ||||||||||||||||||||||||||| |||  | | |||||||||| |||||||||| ||||||||    
T  7858636 gatcctttaagtttgaagtttgtttcggatagttcctttaagtttctaaggtttcagatgagtcatttaagtttcaagtttgtttcagataggtc 7858730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 319 - 407
Target Start/End: Complemental strand, 4799665 - 4799577
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttc 407  Q
    |||||||||| |||  |||||||||||| | |||||||||| |||| || ||||||||||||||||||| |||||| ||||||||||||    
T  4799665 caaatacctccccgattcctttaagtttcatgtttgtttcagatagatcatttaagtttctaaggtttcagatatgtcctttaagtttc 4799577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 4799589 - 4799528
Alignment:
Q  366 tcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||||||||||||||| |||| | ||||||| ||||||||||||||| ||||||||    
T  4799589 tcctttaagtttctaaggtttcagataggtcctttaaatttcgagtttgtttcagataggtc 4799528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 335 - 424
Target Start/End: Complemental strand, 33041029 - 33040938
Alignment:
Q  335 tcctttaagtttaacgtttgtttc--atatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggatag 424  Q
    |||||||||||| | |||||||||  |||||  |||||||||||||||||||||| ||||   | ||||||||||||||||||||| |||||    
T  33041029 tcctttaagtttgaagtttgtttcggatatatgtcctttaagtttctaaggtttcagatagttcttttaagtttcgagtttgtttcagatag 33040938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 335 - 417
Target Start/End: Original strand, 7675578 - 7675660
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgttt 417  Q
    |||||||||||| |||||||||||  |||    |||||||||| ||||||||| |||| | ||||||||||||||||||||||    
T  7675578 tcctttaagtttcacgtttgtttccgatatgatctttaagtttttaaggtttcagataggtcctttaagtttcgagtttgttt 7675660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 4997988 - 4997927
Alignment:
Q  366 tcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||| || ||||||||||||| |||| | ||||||||||||||||||||||| ||||||||    
T  4997988 tccttgaaatttctaaggtttcagataagtcctttaagtttcgagtttgtttcagataggtc 4997927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 335 - 418
Target Start/End: Original strand, 4799391 - 4799474
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    ||||||||||||   |||||||||  |||  || ||||||||||||||||||| |||| | |||||| ||||||||||||||||    
T  4799391 tcctttaagttttgagtttgtttcggatatgtcatttaagtttctaaggtttcagataagtcctttaggtttcgagtttgtttc 4799474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 29134984 - 29135076
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||   |||||||||  |||| |||||||||||||||| ||||| |||| | | ||||| |||| ||||| |||| ||||||||    
T  29134984 tcctttaagtttcgagtttgtttcggatagatcctttaagtttctaaagtttcagataggtcatttaaatttcaagtttttttcagataggtc 29135076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 430
Target Start/End: Original strand, 4997659 - 4997754
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtcttt 430  Q
    |||||||||||| |||||||||| | |||  |||||||||||| |||||||||  |||   | |||||| ||||||||||||| | ||| ||||||    
T  4997659 tcctttaagtttcacgtttgttttaaataaatcctttaagtttttaaggtttcatatagatcttttaaggttcgagtttgttttgaatatgtcttt 4997754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 320 - 436
Target Start/End: Complemental strand, 5986134 - 5986014
Alignment:
Q  320 aaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgcccttta---agtttcgagtttgtt 416  Q
    ||||||||| || |||||||||||||| |  ||| ||||| |||  | |||||||||||||||||||  |||| | ||||||   |||||  ||||||||    
T  5986134 aaatacctccccagatcctttaagtttcatatttatttcagataaattctttaagtttctaaggttttagataggtcctttaattagtttgaagtttgtt 5986035  T
Q  417 tcggataggtc-tttaagttt 436  Q
    ||||||| ||| |||||||||    
T  5986034 tcggataagtcatttaagttt 5986014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 377
Target Start/End: Original strand, 7858591 - 7858649
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagttt 377  Q
    |||||||||| |||| || ||||||||| | |||||||||| |||| ||||||||||||    
T  7858591 caaatacctccccgggtcatttaagtttcatgtttgtttcagatagatcctttaagttt 7858649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 14942340 - 14942413
Alignment:
Q  350 gtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    ||||||||| ||||  |||||||||||||||||||||| ||||   | ||||| ||||||||| ||||| ||||    
T  14942340 gtttgtttcgtatatgtcctttaagtttctaaggtttcagatagatcatttaattttcgagttggtttcagata 14942413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 5e-35; HSPs: 81)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 314 - 436
Target Start/End: Complemental strand, 22564089 - 22563966
Alignment:
Q  314 aaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagttt 413  Q
    |||| |||||||||| | |  ||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||| | ||||||||||||||||||    
T  22564089 aaggccaaatacctccctgagtcctttaagtttaacgtttgtttcagataggtcctttaagtttctaaggtttcagataagtcctttaagtttcgagttt 22563990  T
Q  414 gtttcggataggt-ctttaagttt 436  Q
    ||||||||||||| ||||||||||    
T  22563989 gtttcggataggtcctttaagttt 22563966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 315 - 436
Target Start/End: Complemental strand, 6723578 - 6723456
Alignment:
Q  315 aggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttg 414  Q
    ||||||||||||||||||| |||||||||||| | |||||||||| |||| ||| |||||||||||||||||  ||||   |||||||||||||||||||    
T  6723578 aggtcaaatacctctccgggtcctttaagttttatgtttgtttcagatagatccgttaagtttctaaggttttagatagatcctttaagtttcgagtttg 6723479  T
Q  415 tttcggataggt-ctttaagttt 436  Q
    |||||||||||| ||||||||||    
T  6723478 tttcggataggtcctttaagttt 6723456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 319 - 436
Target Start/End: Complemental strand, 42430737 - 42430619
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    ||||| |||| |||| |||||||||||| | |||||||||| |||| |||||||||||||||||||||| |||| | |||||||||||||||||||||||    
T  42430737 caaattcctccccgggtcctttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttc 42430638  T
Q  419 ggataggt-ctttaagttt 436  Q
    |||||||| ||||||||||    
T  42430637 ggataggtcctttaagttt 42430619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 319 - 436
Target Start/End: Original strand, 3173221 - 3173339
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    ||||||||||  ||| |||||||||||| | |||||||||| |||| |||||||||||| ||||||||| |||| | |||||||||||||||||||||||    
T  3173221 caaatacctcatcgggtcctttaagtttcatgtttgtttcagatagatcctttaagtttttaaggtttcagataggtcctttaagtttcgagtttgtttc 3173320  T
Q  419 ggataggt-ctttaagttt 436  Q
    |||||||| ||||||||||    
T  3173321 ggataggtcctttaagttt 3173339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 319 - 436
Target Start/End: Complemental strand, 18942675 - 18942557
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||||||||||||||||||||| | |||||||||| |||  |||||||||||| ||||||||| |||| | |||||||||||| ||||||||||    
T  18942675 caaatacctctccggatcctttaagtttcatgtttgtttcagataaatcctttaagtttataaggtttcagataggtcctttaagtttcaagtttgtttc 18942576  T
Q  419 ggataggt-ctttaagttt 436  Q
    |||||| | ||||||||||    
T  18942575 ggatagatcctttaagttt 18942557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 319 - 436
Target Start/End: Complemental strand, 42759321 - 42759203
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||| | || |||||||||||| |||||| |||||||||| || ||||||||||||||||||| |||| |  ||||||||||||||||||||||    
T  42759321 caaatacctccctgggtcctttaagtttcacgtttatttcatataggtcttttaagtttctaaggtttcagataggttctttaagtttcgagtttgtttc 42759222  T
Q  419 ggataggt-ctttaagttt 436  Q
    ||||| || ||||||||||    
T  42759221 ggataagtcctttaagttt 42759203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 335 - 436
Target Start/End: Complemental strand, 48840340 - 48840238
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaag 433  Q
    |||||||||||| | |||||||||| |||| ||||||||||||||||||||||  ||| | ||||||||||||||||||||||||||||||| |||||||    
T  48840340 tcctttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcaaataggtcctttaagtttcgagtttgtttcggataggtcctttaag 48840241  T
Q  434 ttt 436  Q
    |||    
T  48840240 ttt 48840238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 335 - 436
Target Start/End: Original strand, 18942310 - 18942412
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggatagg-tctttaag 433  Q
    |||||||||||| | |||||||||| |||| |||||||||||||| ||||||| |||| | ||||||| |||||||||||||||||||||| ||||||||    
T  18942310 tcctttaagtttcatgtttgtttcagatagatcctttaagtttctgaggtttcagataggtcctttaaatttcgagtttgtttcggataggttctttaag 18942409  T
Q  434 ttt 436  Q
    |||    
T  18942410 ttt 18942412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 319 - 436
Target Start/End: Original strand, 44448996 - 44449114
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||| ||| |||| |||||||| ||| | |||||||||| |||| |||||||||||| ||||||||| |||| | |||||||||||||||||||||||    
T  44448996 caaatatctccccgggtcctttaaatttcatgtttgtttcagatagatcctttaagtttttaaggtttcagataggtcctttaagtttcgagtttgtttc 44449095  T
Q  419 ggataggt-ctttaagttt 436  Q
    ||||| || ||||||||||    
T  44449096 ggataagtcctttaagttt 44449114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 319 - 436
Target Start/End: Complemental strand, 46855376 - 46855258
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||| |||| |||||||||||| | |||||||||| |||| |||||||||||| | ||||||| |||| | ||||||||||| |||||||||||    
T  46855376 caaatacctccccgggtcctttaagttttatgtttgtttcagatagatcctttaagtttatgaggtttcagataggtcctttaagtttggagtttgtttc 46855277  T
Q  419 ggataggt-ctttaagttt 436  Q
    | |||||| ||||||||||    
T  46855276 gaataggtcctttaagttt 46855258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 335 - 427
Target Start/End: Complemental strand, 3173653 - 3173563
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||||  ||||| |||||| |||| |||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||    
T  3173653 tcctttaagtt--acgttagtttcagataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcggataggtc 3173563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 319 - 432
Target Start/End: Original strand, 35127437 - 35127549
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||||||| ||||| ||||||| | |||||||||| |||| |||||||||||||||||||||| ||||   || |||||||| || ||||||||    
T  35127437 caaatacctctccgaatcctctaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataaatcc-ttaagttttgaatttgtttc 35127535  T
Q  419 ggataggtctttaa 432  Q
    ||||||||||||||    
T  35127536 ggataggtctttaa 35127549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 319 - 430
Target Start/End: Original strand, 8919489 - 8919599
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||| | ||||  ||||||||| ||| || ||||| |||| |||||||||||||||||||||| |||| | |||||||||||| ||||||||||    
T  8919489 caaatacctccctggatattttaagtttcacgattatttca-atagatcctttaagtttctaaggtttcagataggtcctttaagtttcaagtttgtttc 8919587  T
Q  419 ggataggtcttt 430  Q
    ||||||||||||    
T  8919588 ggataggtcttt 8919599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 314 - 436
Target Start/End: Original strand, 10096940 - 10097062
Alignment:
Q  314 aaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagttt 413  Q
    |||| |||||||||| || |||| ||||||||| | |||||||||| |||| |||||||| ||||||||||||| |||| | ||||||||||| ||||||    
T  10096940 aaggccaaatacctccccagatcatttaagttttatgtttgtttcaaatagatcctttaaatttctaaggtttcagataagtcctttaagttttgagttt 10097039  T
Q  414 gtttcggataggt-ctttaagttt 436  Q
    ||||| ||||||| ||||||||||    
T  10097040 gtttc-gataggtcctttaagttt 10097062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 338 - 436
Target Start/End: Complemental strand, 22642201 - 22642102
Alignment:
Q  338 tttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaagttt 436  Q
    ||||||||| |||||||||||| | || |||||||||||||||||||||| |||||| | ||||||||| |||||||||||||||| || ||||||||||    
T  22642201 tttaagtttcacgtttgtttcagacaggtcctttaagtttctaaggtttcagatatgtcatttaagttttgagtttgtttcggataagtcctttaagttt 22642102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 310 - 436
Target Start/End: Complemental strand, 30648562 - 30648436
Alignment:
Q  310 aaaaaaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcga 409  Q
    ||||||| ||||||||||||| || |||||||||||| | || ||| ||| |||| ||||||||||||| |||||||| |||||| |||||||||||  |    
T  30648562 aaaaaagttcaaatacctctcagg-tcctttaagtttcatgtgtgtgtcagatagatcctttaagtttccaaggtttcagatatgtcctttaagttttaa 30648464  T
Q  410 gtttgtttcggataggt-ctttaagttt 436  Q
    |||||||||| |||||| ||||||||||    
T  30648463 gtttgtttcgaataggtcctttaagttt 30648436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 338 - 436
Target Start/End: Original strand, 9907492 - 9907590
Alignment:
Q  338 tttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtctttaagttt 436  Q
    |||||||||||||||||||||| |||| |||||||||||| ||||||||  |||| | ||||||||||| |||||||||||||||| ||| || |||||    
T  9907492 tttaagtttaacgtttgtttcagataggtcctttaagtttttaaggttttagataggtcctttaagtttggagtttgtttcggatatgtcctttagttt 9907590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 319 - 436
Target Start/End: Complemental strand, 9907912 - 9907794
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    ||||||||| |||||||| ||||||||| | |||| ||||| |||| |||||||||||||||| ||||| |||| |   ||||||||| |||||||||||    
T  9907912 caaatacctttccggatcttttaagtttcatgtttatttcagatagatcctttaagtttctaaagtttcagataggttatttaagtttggagtttgtttc 9907813  T
Q  419 ggataggt-ctttaagttt 436  Q
    |||||||| ||||||||||    
T  9907812 ggataggtcctttaagttt 9907794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 319 - 425
Target Start/End: Complemental strand, 29036504 - 29036399
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||| | || |||||||||||| || ||||||||  |||| |||||||||||||||||||||| |||| |  ||||||||||||||||||||||    
T  29036504 caaatacctcccagggtcctttaagtttcacatttgtttctgataggtcctttaagtttctaaggtttcagata-ggtctttaagtttcgagtttgtttc 29036406  T
Q  419 ggatagg 425  Q
    |||||||    
T  29036405 ggatagg 29036399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 319 - 413
Target Start/End: Complemental strand, 38995329 - 38995235
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagttt 413  Q
    |||||||||||| |||||||||||||||||| ||||||| |  ||| |||||||||||| ||||||||| |||| | ||||||||||||||||||    
T  38995329 caaatacctctctggatcctttaagtttaacatttgttttagttaggtcctttaagtttttaaggtttcagataagtcctttaagtttcgagttt 38995235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 319 - 436
Target Start/End: Original strand, 42758940 - 42759058
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||| | || |||||||||||| | || ||||||| |||| || ||||||||| ||||||||| |||| | |||||||||||||||||||||||    
T  42758940 caaatacctccctgggtcctttaagtttcatgtatgtttcagatagatcttttaagtttataaggtttcagataggtcctttaagtttcgagtttgtttc 42759039  T
Q  419 ggataggtc-tttaagttt 436  Q
     |||||||| |||||||||    
T  42759040 agataggtcatttaagttt 42759058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 3173297 - 3173389
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||   |||||||||  |||| |||||||||||||||||||||| |||| | ||||||||||||||||||||||| ||||||||    
T  3173297 tcctttaagtttcgagtttgtttcggataggtcctttaagtttctaaggtttcagataagtcctttaagtttcgagtttgtttcagataggtc 3173389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 319 - 430
Target Start/End: Complemental strand, 41718434 - 41718322
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgcccttt-aagtttcgagtttgttt 417  Q
    ||||||||||||  | |||||||||||| |||||||||| | |||| | |||||| ||| ||||||||  |||||| ||||| |||||||||||||||||    
T  41718434 caaatacctctctaggtcctttaagtttcacgtttgttttagataggttctttaaatttataaggttttagatatgtccttttaagtttcgagtttgttt 41718335  T
Q  418 cggataggtcttt 430  Q
    |||||||||||||    
T  41718334 cggataggtcttt 41718322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 313 - 424
Target Start/End: Original strand, 39304963 - 39305074
Alignment:
Q  313 aaaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtt 412  Q
    |||||||||||||||    || |||||||||||| |||||||||||| |||| | |||||||||| |||||||||  |||   |||||||||||||||||    
T  39304963 aaaggtcaaataccttcatgggtcctttaagtttcacgtttgtttcagatagattctttaagtttttaaggtttcatatagatcctttaagtttcgagtt 39305062  T
Q  413 tgtttcggatag 424  Q
    ||||||||||||    
T  39305063 tgtttcggatag 39305074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 335 - 426
Target Start/End: Complemental strand, 48840280 - 48840189
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt 426  Q
    ||||||||||||   |||||||||  |||| |||||||||||||||||||||  |||||| ||||||||||||||||||||||| |||||||    
T  48840280 tcctttaagtttcgagtttgtttcggataggtcctttaagtttctaaggttttagatatgtcctttaagtttcgagtttgtttcagataggt 48840189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 333 - 427
Target Start/End: Complemental strand, 6723500 - 6723406
Alignment:
Q  333 gatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||||   |||||||||  |||| ||||||||||||||||||||||  ||| | ||||||||||||||||||||||| ||||||||    
T  6723500 gatcctttaagtttcgagtttgtttcggataggtcctttaagtttctaaggtttcaaataggtcctttaagtttcgagtttgtttcagataggtc 6723406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 333 - 427
Target Start/End: Complemental strand, 9907778 - 9907684
Alignment:
Q  333 gatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||||||| | |||| ||||  |||  |||||||||||||||||||||| |||| | ||||||||||||||||||||||| ||||||||    
T  9907778 gatcctttaagtttgaagtttatttcggataagtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtc 9907684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 315 - 436
Target Start/End: Original strand, 10470502 - 10470623
Alignment:
Q  315 aggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttg 414  Q
    |||||||||||||| |  | ||||||||| || | |||||||||| |||| || ||||||||||||||||||| |||| | |||||||  ||||||||||    
T  10470502 aggtcaaatacctcccgaggtcctttaagatttatgtttgtttcagatagatcatttaagtttctaaggtttcagataggtcctttaa-attcgagtttg 10470600  T
Q  415 tttcggataggt-ctttaagttt 436  Q
    |||||||||||| ||||||||||    
T  10470601 tttcggataggtcctttaagttt 10470623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 436
Target Start/End: Original strand, 22563688 - 22563821
Alignment:
Q  304 taatttaaaaaaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaag 403  Q
    ||||| |||| | |||||||| |||||| | |||||||||||| | |||| ||| | |||  || |||||| |||||||||||| |||| | ||||||||    
T  22563688 taattaaaaatatgtcaaatatctctccaggtcctttaagtttcatgtttattttagatatatcatttaaggttctaaggtttcagataggtcctttaag 22563787  T
Q  404 tttcgagtttgtttcggataggt-ctttaagttt 436  Q
    ||| ||||||||||||||||||| ||||||||||    
T  22563788 tttggagtttgtttcggataggtcctttaagttt 22563821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 427
Target Start/End: Complemental strand, 45443503 - 45443386
Alignment:
Q  310 aaaaaaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcga 409  Q
    |||| ||| ||||||| || | || |||||||||||| |||||||||| | |||| |||||||||||| | ||||||| |||| | ||||||||||||||    
T  45443503 aaaataggccaaatacttccctgggtcctttaagtttcacgtttgttttagataggtcctttaagtttttgaggtttcagataggtcctttaagtttcga 45443404  T
Q  410 gtttgtttcggataggtc 427  Q
    ||||||||  ||||||||    
T  45443403 gtttgttttagataggtc 45443386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 335 - 423
Target Start/End: Original strand, 30648218 - 30648306
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    |||||||||||| | |||| | ||| |||| ||||||||||||||||||||||  ||| | ||||||||||||||||||||||||||||    
T  30648218 tcctttaagtttcatgtttatgtcagatagatcctttaagtttctaaggtttcatataggtcctttaagtttcgagtttgtttcggata 30648306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 335 - 423
Target Start/End: Original strand, 42759016 - 42759104
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    ||||||||||||   |||||||||| |||| || ||||||||||||||||||| |||| | ||||||||||||||||||||||| ||||    
T  42759016 tcctttaagtttcgagtttgtttcagataggtcatttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagata 42759104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 320 - 418
Target Start/End: Original strand, 37042976 - 37043074
Alignment:
Q  320 aaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    ||||||||||| || |||||||||||| | ||||||||   |||| | |||||||||||||||||||| ||||   |||||||||||||||||||||||    
T  37042976 aaatacctctctgggtcctttaagtttcatgtttgtttaggatagatgctttaagtttctaaggtttcagatagatcctttaagtttcgagtttgtttc 37043074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 319 - 436
Target Start/End: Complemental strand, 37043425 - 37043308
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||||| || |||||||||||| |  ||||||||| |||| || ||||| ||||||| ||||| |||  | ||||||||||| |||||||||||    
T  37043425 caaatacctctctgggtcctttaagtttcatatttgtttcagatagatcttttaaatttctaaagtttcagat-ggtcctttaagttttgagtttgtttc 37043327  T
Q  419 ggatagg-tctttaagttt 436  Q
    ||||||| |||||||||||    
T  37043326 ggataggttctttaagttt 37043308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 338 - 427
Target Start/End: Complemental strand, 37393748 - 37393659
Alignment:
Q  338 tttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||| ||| |||||||||| | |||| |||||||||||| |||||||||||||| | | || ||||||||||||||| |||||||||||    
T  37393748 tttaaatttcacgtttgttttagataggtcctttaagtttttaaggtttcggataggtctttaaagtttcgagtttgtctcggataggtc 37393659  T

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Target: chr7; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 316 - 436
Target Start/End: Complemental strand, 44941380 - 44941259
Alignment:
Q  316 ggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgt 415  Q
    ||||||||||||| | | ||||||||||||| || ||||||| | |||  || |||| ||| ||||| |||| |||| | ||||||||||||||||||||    
T  44941380 ggtcaaatacctccctgaatcctttaagtttcacatttgttttagataagtcatttatgttgctaagctttcagataggtcctttaagtttcgagtttgt 44941281  T
Q  416 ttcggataggt-ctttaagttt 436  Q
    || |||||||| ||||||||||    
T  44941280 tttggataggtcctttaagttt 44941259  T

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Target: chr7; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 319 - 436
Target Start/End: Complemental strand, 45910051 - 45909937
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    ||||||||||||||||||||| |||||| |  ||||||||| |||| |||||||||||||||||||||| |||  |    | ||||||||||||||||||    
T  45910051 caaatacctctccggatccttcaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagatggg----tcaagtttcgagtttgtttc 45909956  T
Q  419 ggataggt-ctttaagttt 436  Q
    | |||| | ||||||||||    
T  45909955 gtatagatcctttaagttt 45909937  T

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Target: chr7; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 8919564 - 8919656
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||||| | |||||||||  |||| || ||||||||| ||||||||| |||| | ||||||||||| ||||||||||| ||||||||    
T  8919564 tcctttaagtttcaagtttgtttcggataggtcttttaagtttttaaggtttcagataggtcctttaagttttgagtttgtttcagataggtc 8919656  T

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Target: chr7; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 423
Target Start/End: Original strand, 22563779 - 22563867
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    ||||||||||||   |||||||||  |||| |||||||||||||||||||||| |||| | | ||||||||||||||||||||| ||||    
T  22563779 tcctttaagtttggagtttgtttcggataggtcctttaagtttctaaggtttcagataagtcttttaagtttcgagtttgtttcagata 22563867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 423
Target Start/End: Complemental strand, 22564008 - 22563920
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    ||||||||||||   |||||||||  |||| ||||||||||||||||| |||| |||| | ||||||||||||||||||||||| ||||    
T  22564008 tcctttaagtttcgagtttgtttcggataggtcctttaagtttctaagatttcagataggtcctttaagtttcgagtttgtttccgata 22563920  T

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Target: chr7; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 423
Target Start/End: Original strand, 37393333 - 37393420
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    |||||||||||| | |||||||||| |||| |||| ||||||| ||||| ||| |||| | ||||||||||||||||||||||||||||    
T  37393333 tcctttaagtttcatgtttgtttcagatagatcctctaagtttttaagg-ttcagataggtcctttaagtttcgagtttgtttcggata 37393420  T

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Target: chr7; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 427
Target Start/End: Complemental strand, 45324932 - 45324840
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||   |||||||||| |||| |||||||||||| ||||||||| |||| |  ||||||||||| |||||||||| ||||||||    
T  45324932 tcctttaagtttcgagtttgtttcagataggtcctttaagtttttaaggtttcagataagttctttaagtttcaagtttgtttcagataggtc 45324840  T

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Target: chr7; HSP #43
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 335 - 430
Target Start/End: Original strand, 44449072 - 44449167
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtcttt 430  Q
    ||||||||||||   |||||||||  |||  |||||||||||||||||||||| |||| |  |||||||||||||||||||||| |||| ||||||    
T  44449072 tcctttaagtttcgagtttgtttcggataagtcctttaagtttctaaggtttcagataagttctttaagtttcgagtttgtttcagatatgtcttt 44449167  T

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Target: chr7; HSP #44
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 338 - 436
Target Start/End: Complemental strand, 45324989 - 45324890
Alignment:
Q  338 tttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaagttt 436  Q
    ||||||||| | |||| ||| | |||| |||||| ||||||||| ||||| |||| | ||||||||||||||||||||||| ||||||| ||||||||||    
T  45324989 tttaagttttatgtttcttttagatagatcctttgagtttctaaagtttcagataagtcctttaagtttcgagtttgtttcagataggtcctttaagttt 45324890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 368 - 427
Target Start/End: Original strand, 45443282 - 45443341
Alignment:
Q  368 ctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||||||||||||| |||| | ||||||||||||||||||||||| ||||||||    
T  45443282 ctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtc 45443341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 334 - 424
Target Start/End: Complemental strand, 47193601 - 47193511
Alignment:
Q  334 atcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggatag 424  Q
    ||||||||||||| | || ||||| | |||| || ||||||||||||||||||  |||| | |||||||||||||||||| ||||||||||    
T  47193601 atcctttaagtttcatgtatgttttagatagatcttttaagtttctaaggttttagataggtcctttaagtttcgagtttatttcggatag 47193511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 436
Target Start/End: Original strand, 48840023 - 48840124
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaag 433  Q
    |||||||||||| |||||||||||| |||| ||||||||  |||||||||||| |||| |  |||||| ||| ||||||||||||||||| | |||||||    
T  48840023 tcctttaagtttcacgtttgtttcagataggtcctttaa-attctaaggtttcagataggttctttaaattttgagtttgtttcggatagatcctttaag 48840121  T
Q  434 ttt 436  Q
    |||    
T  48840122 ttt 48840124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 427
Target Start/End: Complemental strand, 18808202 - 18808113
Alignment:
Q  338 tttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||| |||||||||| | |||| ||||||| |||||||||||||  ||||   ||||||| ||||||||||||||| ||||||||    
T  18808202 tttaagtttcacgtttgttttagataggtcctttatgtttctaaggttttagatagatcctttaaatttcgagtttgtttcagataggtc 18808113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 333 - 430
Target Start/End: Complemental strand, 44449297 - 44449201
Alignment:
Q  333 gatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtcttt 430  Q
    |||||||||||||| |||||||||  | |||| |||||||| ||||||||||||  |||| | || |||||||||||||||||||  |||||||||||    
T  44449297 gatcctttaagttttacgtttgttctagataggtcctttaaatttctaaggttttagataggtcc-ttaagtttcgagtttgttttagataggtcttt 44449201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 423
Target Start/End: Complemental strand, 45203856 - 45203783
Alignment:
Q  350 gtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    |||||||||  |||| |||||||||||| ||||||||| |||| | ||||||||||||||||||||||| ||||    
T  45203856 gtttgtttcggatagatcctttaagtttttaaggtttcagataggtcctttaagtttcgagtttgtttcagata 45203783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 319 - 418
Target Start/End: Original strand, 22641894 - 22641998
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcct-----ttaagtttctaaggtttcggatatgccctttaagtttcgagttt 413  Q
    |||||||||| ||| |||||||| |||| | |||||||||| |||  ||||     |||||||||||||||||| |||| | ||||||||||||||||||    
T  22641894 caaatacctccccgaatcctttatgtttcatgtttgtttcagatacatcctttaagttaagtttctaaggtttcagataggtcctttaagtttcgagttt 22641993  T
Q  414 gtttc 418  Q
    |||||    
T  22641994 gtttc 22641998  T

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Target: chr7; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 30648278 - 30648370
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||   |||||||||  |||  ||||||||| |||||||||||| |||| | |||||||||||||| |||||||| ||||||||    
T  30648278 tcctttaagtttcgagtttgtttcggataagtcctttaagcttctaaggtttcagataagtcctttaagtttcgattttgtttcagataggtc 30648370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 335 - 423
Target Start/End: Complemental strand, 44941301 - 44941213
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    ||||||||||||   ||||||||   |||| ||||||||||||||||| |||| |||| | ||||||||||||||||||||||| ||||    
T  44941301 tcctttaagtttcgagtttgttttggataggtcctttaagtttctaagatttcagataagtcctttaagtttcgagtttgtttcagata 44941213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 335 - 423
Target Start/End: Original strand, 45324574 - 45324661
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    |||||||||||| |||||||||||| |||  || ||||||||||||||||||| ||||||   |||||||||| ||||||||| |||||    
T  45324574 tcctttaagttttacgtttgtttcagatatgtcgtttaagtttctaaggtttcagatatg-tttttaagtttcaagtttgttttggata 45324661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 436
Target Start/End: Complemental strand, 8919825 - 8919722
Alignment:
Q  334 atcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaa 432  Q
    ||||||||||||| |  ||| ||||| |||| || ||||||||||||||||||| |||| | |||||||||||  |||||||||| ||||| | ||||||    
T  8919825 atcctttaagtttcatatttatttcagatagatcttttaagtttctaaggtttcagataagtcctttaagtttgaagtttgtttcagatagatcctttaa 8919726  T
Q  433 gttt 436  Q
    ||||    
T  8919725 gttt 8919722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 436
Target Start/End: Complemental strand, 35127797 - 35127698
Alignment:
Q  338 tttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaagttt 436  Q
    ||||||||| |||||||||| | |||  |||||||| |||||||||| || |||| | ||||| |||||||||||||||| |||| ||| ||||||||||    
T  35127797 tttaagtttcacgtttgttttagatatgtcctttaaatttctaaggtatcagataggtccttttagtttcgagtttgtttaggatgggtcctttaagttt 35127698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 337 - 427
Target Start/End: Complemental strand, 29036427 - 29036337
Alignment:
Q  337 ctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||   |||||||||  ||||  ||||||||||| ||||||||| |||| |  |||||||||||||||||||||||||| ||||    
T  29036427 ctttaagtttcgagtttgtttcggataggccctttaagtttttaaggtttcagataggttctttaagtttcgagtttgtttcggattggtc 29036337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 312 - 436
Target Start/End: Original strand, 41718004 - 41718128
Alignment:
Q  312 aaaaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttccttt-aagtttctaaggtttcggatatgccctttaagtttcgag 410  Q
    |||||||||||||| | ||||| | |||||||| | | |||||||||| |||| || ||| ||||||| ||||||| | ||  | |||||||||||||||    
T  41718004 aaaaggtcaaatacat-tccggtttctttaagtatcatgtttgtttcagatagatctttttaagtttcaaaggtttag-atgggtcctttaagtttcgag 41718101  T
Q  411 tttgtttcggataggt-ctttaagttt 436  Q
    |||||||||||||||| ||||||||||    
T  41718102 tttgtttcggataggtcctttaagttt 41718128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 335 - 417
Target Start/End: Complemental strand, 42430661 - 42430579
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgttt 417  Q
    ||||||||||||   |||||||||  |||| |||||||||||||||||||||  |||| | | ||||||||||||||||||||    
T  42430661 tcctttaagtttcgagtttgtttcggataggtcctttaagtttctaaggtttaagataggtcatttaagtttcgagtttgttt 42430579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 337 - 427
Target Start/End: Complemental strand, 42759243 - 42759153
Alignment:
Q  337 ctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||   |||||||||  |||  ||||||||||||||||| |||| |||| | ||||||| ||||||||||||||| ||||||||    
T  42759243 ctttaagtttcgagtttgtttcggataagtcctttaagtttctaagatttcagataggtcctttaaatttcgagtttgtttcagataggtc 42759153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 361 - 423
Target Start/End: Original strand, 45203668 - 45203730
Alignment:
Q  361 atagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    |||| |||||||||||||||||||||| |||| | | ||||||||||||||||||||| ||||    
T  45203668 atagatcctttaagtttctaaggtttcagataggtcttttaagtttcgagtttgtttcagata 45203730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 427
Target Start/End: Original strand, 29036203 - 29036292
Alignment:
Q  338 tttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||| | |||||||| | |||| | |||||||||||||||||||| | || |  |||| ||||||||||||||||| ||||||||    
T  29036203 tttaagtttgaagtttgtttaagataggttctttaagtttctaaggtttcaggtaggttctttgagtttcgagtttgtttcagataggtc 29036292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 423
Target Start/End: Original strand, 44941075 - 44941160
Alignment:
Q  338 tttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    ||||||||| | |||| ||||  |||| |||||||||||||||||||||| ||||   ||||||||||| ||||||||||| ||||    
T  44941075 tttaagtttgaagtttatttcggatagatcctttaagtttctaaggtttcagatagatcctttaagttttgagtttgtttcagata 44941160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 423
Target Start/End: Complemental strand, 45909964 - 45909891
Alignment:
Q  350 gtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    ||||||||| ||||| ||||||||||||||| |||||  |||| | |||| |||||||||||||||||| ||||    
T  45909964 gtttgtttcgtatagatcctttaagtttctatggttttagataggtccttaaagtttcgagtttgtttcagata 45909891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 316 - 436
Target Start/End: Original strand, 47332331 - 47332451
Alignment:
Q  316 ggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgt 415  Q
    |||||||||||| | | | || ||||||||| | |||||||| | |||| || ||||||||||||||||||| |||| |  ||||||||||  |||||||    
T  47332331 ggtcaaataccttttcaggtcgtttaagtttcatgtttgttttagatagatcatttaagtttctaaggtttcagata-ggtctttaagtttaaagtttgt 47332429  T
Q  416 ttcggataggt-ctttaagttt 436  Q
    |||| |||||| ||||||||||    
T  47332430 ttcgaataggtcctttaagttt 47332451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 423
Target Start/End: Complemental strand, 18942599 - 18942511
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    |||||||||||| | |||||||||  |||| ||||||||||||||||| |||| |||| | | ||||||| |||||||| |||| ||||    
T  18942599 tcctttaagtttcaagtttgtttcggatagatcctttaagtttctaagatttcagataggtcatttaagtctcgagtttctttcagata 18942511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 436
Target Start/End: Original strand, 45443191 - 45443291
Alignment:
Q  337 ctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata-ggtctttaagtt 435  Q
    |||||||||| | || ||||||| |||  || ||||||||| ||||||||| ||||   |||||||||| ||||||||||||||||| | ||||||||||    
T  45443191 ctttaagtttcatgtctgtttcagataaatcatttaagtttttaaggtttcagatagatcctttaagttccgagtttgtttcggatatgttctttaagtt 45443290  T
Q  436 t 436  Q
    |    
T  45443291 t 45443291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 368 - 427
Target Start/End: Original strand, 35127544 - 35127603
Alignment:
Q  368 ctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||| ||||||||||||| |||| | | ||||||||||||||||||||| ||||||||    
T  35127544 ctttaaatttctaaggtttcagataggtcatttaagtttcgagtttgtttcagataggtc 35127603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 372 - 417
Target Start/End: Original strand, 6723275 - 6723320
Alignment:
Q  372 aagtttctaaggtttcggatatgccctttaagtttcgagtttgttt 417  Q
    |||||| ||||||||| |||||| ||||||||||||||||||||||    
T  6723275 aagtttttaaggtttcagatatgtcctttaagtttcgagtttgttt 6723320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 366 - 423
Target Start/End: Complemental strand, 22642113 - 22642056
Alignment:
Q  366 tcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    |||||||||||| ||||||||  |||| | ||||||||||||||||||||||| ||||    
T  22642113 tcctttaagtttttaaggttttagataggtcctttaagtttcgagtttgtttcagata 22642056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 35127709 - 35127648
Alignment:
Q  366 tcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||||||||| |||||  ||| |  |||||||||||||||||||||| ||||||||    
T  35127709 tcctttaagtttctaatgtttcatataagttctttaagtttcgagtttgtttcagataggtc 35127648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 336 - 436
Target Start/End: Original strand, 44941013 - 44941114
Alignment:
Q  336 cctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaagt 434  Q
    ||||||||||| | |||||||| | |||| || ||||||||||||||||||  |||| | | |||||||||  ||||| |||||||||| | ||||||||    
T  44941013 cctttaagtttcatgtttgttttaaatagatcatttaagtttctaaggtttaagataagtcatttaagtttgaagtttatttcggatagatcctttaagt 44941112  T
Q  435 tt 436  Q
    ||    
T  44941113 tt 44941114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 423
Target Start/End: Complemental strand, 37043350 - 37043263
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    ||||||||||||   |||||||||  |||| | |||||||||||||||||||| |||| |   ||||||||||||||||||||| ||||    
T  37043350 tcctttaagttttgagtttgtttcggataggttctttaagtttctaaggtttcagata-ggtttttaagtttcgagtttgtttcagata 37043263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 436
Target Start/End: Complemental strand, 9907821 - 9907734
Alignment:
Q  350 gtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaagttt 436  Q
    |||||||||  |||| |||||||||||| ||||||||| ||||   |||||||||||  ||||| ||||||||| || ||||||||||    
T  9907821 gtttgtttcggataggtcctttaagtttataaggtttcagatagatcctttaagtttgaagtttatttcggataagtcctttaagttt 9907734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 416
Target Start/End: Original strand, 39305043 - 39305125
Alignment:
Q  333 gatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtt 416  Q
    ||||||||||||||   |||||||||  |||| ||||||| |||||||||||||  |||| |  ||||||||||||||||||||    
T  39305043 gatcctttaagtttcgagtttgtttcggatagatcctttacgtttctaaggtttgagata-ggtctttaagtttcgagtttgtt 39305125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 436
Target Start/End: Complemental strand, 45203900 - 45203829
Alignment:
Q  366 tcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaagttt 436  Q
    ||||||||||||||||| |||  | || | ||||||| ||||||||||||||||||||| | ||||||||||    
T  45203900 tcctttaagtttctaagattttaggtaggtcctttaaatttcgagtttgtttcggatagatcctttaagttt 45203829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 414
Target Start/End: Complemental strand, 46855300 - 46855221
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttg 414  Q
    ||||||||||||   |||||||||  |||| ||||||||||||||||| |  | |||| | |||||||||||||||||||    
T  46855300 tcctttaagtttggagtttgtttcgaataggtcctttaagtttctaagatcccagataggtcctttaagtttcgagtttg 46855221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 436
Target Start/End: Original strand, 10097021 - 10097121
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaag 433  Q
    ||||||||||||   |||||||||  |||| ||||||||||||||||| |||| |||| |  ||||||||||| ||||| |||| ||||||| |||||||    
T  10097021 tcctttaagttttgagtttgtttcg-ataggtcctttaagtttctaagatttcagataag-tctttaagtttcaagtttatttcagataggtcctttaag 10097118  T
Q  434 ttt 436  Q
    |||    
T  10097119 ttt 10097121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 18942385 - 18942458
Alignment:
Q  350 gtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    |||||||||  |||| | ||||||||||||||| |||| |||| | | ||||||||| ||||||||||| ||||    
T  18942385 gtttgtttcggataggttctttaagtttctaagttttcagataggtcttttaagttttgagtttgtttcagata 18942458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 37393392 - 37393484
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||   |||||||||  |||  ||||||||| || | ||||||| |||| | || ||||||||||||||||||||  |||||||    
T  37393392 tcctttaagtttcgagtttgtttcggataagtcctttaagatttttaggtttcagataggtcccttaagtttcgagtttgtttcaaataggtc 37393484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 427
Target Start/End: Complemental strand, 47193540 - 47193448
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||   |||| ||||  |||| ||||| |||||||||||||||  |||| | |||||||||||| | ||||||||  |||||||    
T  47193540 tcctttaagtttcgagtttatttcggatagatccttcaagtttctaaggttttagataggtcctttaagtttcaaatttgtttcatataggtc 47193448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 5e-35; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 319 - 430
Target Start/End: Original strand, 10820219 - 10820330
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    ||||||||||   ||||||||||||||| |||||||||||| |||| |||||||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  10820219 caaatacctccttggatcctttaagtttcacgtttgtttcagatagatcctttaagtttctaaggtttcagatatgttctttaagtttcgagtttgtttc 10820318  T
Q  419 ggataggtcttt 430  Q
    ||||||||||||    
T  10820319 ggataggtcttt 10820330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 310 - 436
Target Start/End: Complemental strand, 33623471 - 33623344
Alignment:
Q  310 aaaaaaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcga 409  Q
    ||||||||||||||||||| | ||||||||||||||| |||| ||||| | |||| |||||||||||||||||||||| ||||   ||||||||||||||    
T  33623471 aaaaaaggtcaaatacctccctggatcctttaagtttcacgtctgttttagataggtcctttaagtttctaaggtttcagatagatcctttaagtttcga 33623372  T
Q  410 gtttgtttcggataggt-ctttaagttt 436  Q
    |||||||||||||| || ||||||||||    
T  33623371 gtttgtttcggatatgtcctttaagttt 33623344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 314 - 436
Target Start/End: Original strand, 11871388 - 11871511
Alignment:
Q  314 aaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagttt 413  Q
    ||||||||||||||| | || |||||||||||| |||| ||||||| |||| ||||||||||||| |||||||| |||| | ||||||||||||||||||    
T  11871388 aaggtcaaatacctccctgggtcctttaagtttcacgtctgtttcagataggtcctttaagtttccaaggtttcagataggtcctttaagtttcgagttt 11871487  T
Q  414 gtttcggataggt-ctttaagttt 436  Q
    |||||| |||||| ||||||||||    
T  11871488 gtttcgtataggtcctttaagttt 11871511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 335 - 436
Target Start/End: Complemental strand, 13712395 - 13712293
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaag 433  Q
    |||||||||||| |||||||||||| |||| |||||||||||||||||||||| |||| |  |||||||||||||||||||||||||||||| |||||||    
T  13712395 tcctttaagtttcacgtttgtttcagataggtcctttaagtttctaaggtttcagataggttctttaagtttcgagtttgtttcggataggtcctttaag 13712296  T
Q  434 ttt 436  Q
    |||    
T  13712295 ttt 13712293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 319 - 423
Target Start/End: Complemental strand, 13658275 - 13658171
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||| | || |||||||| ||||| ||||||||||||||  |||||||||||||||||||||| |||| | |||||||||||||||||||||||    
T  13658275 caaatacctccctgggtcctttaaatttaatgtttgtttcatataagtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttc 13658176  T
Q  419 ggata 423  Q
    |||||    
T  13658175 ggata 13658171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 335 - 436
Target Start/End: Original strand, 7515413 - 7515515
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaag 433  Q
    |||||||||||| |||||||||||| |||| |||||||||||||||| ||||| |||| | ||||||||||| ||||||||||||||||||| |||||||    
T  7515413 tcctttaagtttcacgtttgtttcagataggtcctttaagtttctaaagtttcagataagtcctttaagttttgagtttgtttcggataggtcctttaag 7515512  T
Q  434 ttt 436  Q
    |||    
T  7515513 ttt 7515515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 335 - 436
Target Start/End: Original strand, 43122605 - 43122707
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata-ggtctttaag 433  Q
    |||||||||||| |||||||||||| ||||  ||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||| | ||||||||    
T  43122605 tcctttaagtttcacgtttgtttcagatagaccctttaagtttttaaggtttcagataggccctttaagtttcgagtttgtttcggatatgttctttaag 43122704  T
Q  434 ttt 436  Q
    |||    
T  43122705 ttt 43122707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 320 - 436
Target Start/End: Complemental strand, 7515748 - 7515631
Alignment:
Q  320 aaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcg 419  Q
    ||||| |||||||| || ||||| ||| |||||||||| | |||| | |||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  7515748 aaatatctctccgggtcttttaaatttcacgtttgttttaaatagattctttaagtttctaaggtttcagatatgtcctttaagtttcgagtttgtttcg 7515649  T
Q  420 gataggt-ctttaagttt 436  Q
    | ||||| ||||||||||    
T  7515648 ggtaggtcctttaagttt 7515631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 319 - 418
Target Start/End: Complemental strand, 1772069 - 1771971
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||| | || |||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||| | |||||||||||| ||||||||||    
T  1772069 caaatacctcactgggtcctttaagtttcacgtttgtttcatataggtcctttaagtttctaaggtttcagata-gtcctttaagtttcaagtttgtttc 1771971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 335 - 436
Target Start/End: Original strand, 26997211 - 26997313
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaag 433  Q
    |||||||||||| | |||||||||| |||| ||||||||||||||| |||||  |||||| |||||||||||||||||||||||||||| || |||||||    
T  26997211 tcctttaagtttcatgtttgtttcaaataggtcctttaagtttctagggtttaagatatgtcctttaagtttcgagtttgtttcggatatgtcctttaag 26997310  T
Q  434 ttt 436  Q
    |||    
T  26997311 ttt 26997313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 319 - 436
Target Start/End: Original strand, 29777243 - 29777360
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||| |||| ||||||| |||| | |||||||||| |||| ||||||||||||||||||||||  ||| | ||||||||||| |||||||||||    
T  29777243 caaatacctc-ccgggtcctttacgttttatgtttgtttcagatagatcctttaagtttctaaggtttcatataggtcctttaagtttggagtttgtttc 29777341  T
Q  419 ggataggt-ctttaagttt 436  Q
    |||||||| ||||||||||    
T  29777342 ggataggtcctttaagttt 29777360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 319 - 427
Target Start/End: Original strand, 13657893 - 13658001
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||| |||| | |||||||||| | |||||||||| |||| || ||||||||||||||||||| |||| | ||||||||||| |||||||||||    
T  13657893 caaatacctccccgggtactttaagtttcatgtttgtttcagatagatcatttaagtttctaaggtttcagataagtcctttaagtttggagtttgtttc 13657992  T
Q  419 ggataggtc 427  Q
     ||||||||    
T  13657993 agataggtc 13658001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 17579759 - 17579851
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||||| | |||||||||| |||| | |||||||||||||||||||| |||| |  |||||||||||||||||||||||||||||||    
T  17579759 tcctttaagtttcatgtttgtttcagataggttctttaagtttctaaggtttcagataggtgctttaagtttcgagtttgtttcggataggtc 17579851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 335 - 426
Target Start/End: Original strand, 7515473 - 7515564
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt 426  Q
    ||||||||||||   |||||||||  |||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||    
T  7515473 tcctttaagttttgagtttgtttcggataggtcctttaagtttctaaggtttcggataggtcctttaagtttcgagtttgtttcagataggt 7515564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 322 - 427
Target Start/End: Original strand, 3750599 - 3750705
Alignment:
Q  322 atacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatg-ccctttaagtttcgagtttgtttcgg 420  Q
    ||||||| | || |||||||||||| |||||||||||| |||| ||||||||||||||||||||||  ||| | |  |||||||||||||||||||||||    
T  3750599 atacctccctgggtcctttaagtttcacgtttgtttcagataggtcctttaagtttctaaggtttcaaataagtctttttaagtttcgagtttgtttcgg 3750698  T
Q  421 ataggtc 427  Q
    |||||||    
T  3750699 ataggtc 3750705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 316 - 436
Target Start/End: Complemental strand, 43122973 - 43122851
Alignment:
Q  316 ggtcaaatacctctccgga-tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttg 414  Q
    ||||||||||||| || || |||||||||||| | |||| ||||| |||| || ||||||||||||||||||| |||| | |||||||||||  ||||||    
T  43122973 ggtcaaatacctcccccgagtcctttaagtttcatgtttttttcagatagatcgtttaagtttctaaggtttcagataagtcctttaagtttgtagtttg 43122874  T
Q  415 tttcggataggtc-tttaagttt 436  Q
    ||||||||||||| |||||||||    
T  43122873 tttcggataggtcatttaagttt 43122851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 311 - 427
Target Start/End: Complemental strand, 8112924 - 8112808
Alignment:
Q  311 aaaaaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgag 410  Q
    ||||||| ||||||||| |  || ||| |||||||| |||||||||| | |||| |||||||| ||||||||||||| |||| | |||| ||||||||||    
T  8112924 aaaaaggccaaatacctttatgggtcccttaagtttcacgtttgttttagataggtcctttaaatttctaaggtttcagataagtccttaaagtttcgag 8112825  T
Q  411 tttgtttcggataggtc 427  Q
    ||||||| |||||||||    
T  8112824 tttgttttggataggtc 8112808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 48517926 - 48518018
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||| ||||||| | |||||||| | |||| |||||||||||||||||||||  |||| | ||||||||||||||||||||||||||||||||    
T  48517926 tcctctaagtttcatgtttgttttagatagatcctttaagtttctaaggttttagataggtcctttaagtttcgagtttgtttcggataggtc 48518018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 319 - 423
Target Start/End: Complemental strand, 50293939 - 50293835
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    ||||||||||| ||| |||| ||||||| | |||||||||| |||| |||||||||||| ||||||||| |||| | ||||||||||| ||||||||||     
T  50293939 caaatacctcttcgggtcctataagttttatgtttgtttcagatagatcctttaagtttttaaggtttcagataggtcctttaagtttggagtttgtttt 50293840  T
Q  419 ggata 423  Q
    |||||    
T  50293839 ggata 50293835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 318 - 421
Target Start/End: Original strand, 25147119 - 25147222
Alignment:
Q  318 tcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgttt 417  Q
    ||||||||||| |||| || ||||||||| | |||||||||| |||| || ||||||||||||||||||| |||  | |||||||||||| |||||||||    
T  25147119 tcaaatacctccccgggtcttttaagtttcatgtttgtttcagatagatcatttaagtttctaaggtttcagatgagtcctttaagtttcaagtttgttt 25147218  T
Q  418 cgga 421  Q
    ||||    
T  25147219 cgga 25147222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 314 - 436
Target Start/End: Complemental strand, 24098350 - 24098225
Alignment:
Q  314 aaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatat--gccctttaagtttcgagt 411  Q
    ||||||||||||||||| || |||||||||||| |||||||||||| |||| |||||||||||||||| ||||  |||||  |  ||||||||| | | |    
T  24098350 aaggtcaaatacctctctgggtcctttaagtttcacgtttgtttcagataggtcctttaagtttctaaagttttagatataggttctttaagttgcaaat 24098251  T
Q  412 ttgtttcggataggtc-tttaagttt 436  Q
    |||||||||||| ||| |||||||||    
T  24098250 ttgtttcggatatgtcatttaagttt 24098225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 319 - 436
Target Start/End: Complemental strand, 47220592 - 47220474
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||| ||| ||||||| ||||||||| | |||||||| | |||| |||||||||||||||||||||  |||||| ||||||||||   ||||||||||    
T  47220592 caaatatctccccggatcgtttaagtttcatgtttgtttaagatagatcctttaagtttctaaggttttagatatgtcctttaagttggaagtttgtttc 47220493  T
Q  419 ggataggt-ctttaagttt 436  Q
    |||| ||| ||||||||||    
T  47220492 ggattggtcctttaagttt 47220474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 350 - 424
Target Start/End: Complemental strand, 52212009 - 52211935
Alignment:
Q  350 gtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggatag 424  Q
    |||||||||  |||| |||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||    
T  52212009 gtttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcggatag 52211935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 320 - 436
Target Start/End: Complemental strand, 26997574 - 26997457
Alignment:
Q  320 aaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcg 419  Q
    ||||||||||| |  |||||||||||  | |||||||||| |||| |||||||||||||||||||||| |||| | |||||||||||   |||||||| |    
T  26997574 aaatacctctctgtgtcctttaagttccatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttgatgtttgttttg 26997475  T
Q  420 gataggt-ctttaagttt 436  Q
    ||||||| ||||||||||    
T  26997474 gataggtcctttaagttt 26997457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 350 - 427
Target Start/End: Original strand, 31324205 - 31324282
Alignment:
Q  350 gtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||  |||| |||||||||||||||||||||| |||| | ||||||||||||||||||||||| ||||||||    
T  31324205 gtttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtc 31324282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 335 - 427
Target Start/End: Complemental strand, 10820524 - 10820432
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||||| | ||||||||   |||| |||||||||||||||||||||| |||| | |||||||||||| |||||||||| ||||||||    
T  10820524 tcctttaagtttgaagtttgttttggataggtcctttaagtttctaaggtttcagataagtcctttaagtttcaagtttgtttcagataggtc 10820432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 337 - 436
Target Start/End: Complemental strand, 11218450 - 11218350
Alignment:
Q  337 ctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaagtt 435  Q
    |||||||||| | |||| ||||| |||| ||||||||||||||||||||||  | ||| |||||||||||| |||||||||| ||||||| |||||||||    
T  11218450 ctttaagtttcatgtttatttcagatagatcctttaagtttctaaggtttcaaacatgtcctttaagtttcaagtttgtttcagataggtcctttaagtt 11218351  T
Q  436 t 436  Q
    |    
T  11218350 t 11218350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 11871469 - 11871561
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||   ||||||||| ||||| |||||||||||||||||||||| |||| | | ||||||||||||||||||||  ||||||||    
T  11871469 tcctttaagtttcgagtttgtttcgtataggtcctttaagtttctaaggtttcagataggtcttttaagtttcgagtttgttttagataggtc 11871561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 319 - 423
Target Start/End: Complemental strand, 11871743 - 11871639
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||| |||| |||| ||| ||| | |||||||||| |||| |||||||||||| ||||||||| |||| | |||||||||||  ||||||||||    
T  11871743 caaatacctccccgggtcctataaattttatgtttgtttcagatagatcctttaagtttataaggtttcagataggtcctttaagtttgaagtttgtttc 11871644  T
Q  419 ggata 423  Q
    |||||    
T  11871643 ggata 11871639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 13712106 - 13712198
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||||  | |||||||||  |||| |||||||||||||||||||||| ||||   ||||||||||||||||||||||| ||||||||    
T  13712106 tcctttaagttggaagtttgtttcgaataggtcctttaagtttctaaggtttcagatagatcctttaagtttcgagtttgtttcagataggtc 13712198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 361 - 427
Target Start/End: Complemental strand, 3750946 - 3750880
Alignment:
Q  361 atagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||| |||||||||||||||||||||| |||| | ||||||||||||||||||||||| ||||||||    
T  3750946 ataggtcctttaagtttctaaggtttcagataagtcctttaagtttcgagtttgtttcagataggtc 3750880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 319 - 436
Target Start/End: Original strand, 13712030 - 13712148
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||| |||| |||||||||||| | |||||||||| |||  |||||||||||||||| |||||  ||| | ||||||||||   ||||||||||    
T  13712030 caaatacctccccgggtcctttaagttttatgtttgtttcagataaatcctttaagtttctaaagtttcaaataggtcctttaagttggaagtttgtttc 13712129  T
Q  419 ggataggt-ctttaagttt 436  Q
    | |||||| ||||||||||    
T  13712130 gaataggtcctttaagttt 13712148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 337 - 427
Target Start/End: Complemental strand, 13712333 - 13712243
Alignment:
Q  337 ctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||   |||||||||  |||| |||||||||||| ||||||||| |||| | ||||||||||||||||||||||| ||||||||    
T  13712333 ctttaagtttcgagtttgtttcggataggtcctttaagtttttaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtc 13712243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 319 - 436
Target Start/End: Original strand, 47220225 - 47220343
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||||| || | |||||||||| |||||||||| | |||| | |||||||||||||| |||||   ||   ||||||| |||||||||||||||    
T  47220225 caaatacctctctgggttctttaagtttcacgtttgtttaagataggttctttaagtttctaaagtttcaactaaatcctttaaatttcgagtttgtttc 47220324  T
Q  419 ggataggt-ctttaagttt 436  Q
    |||||||| ||||||||||    
T  47220325 ggataggtcctttaagttt 47220343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 338 - 424
Target Start/End: Complemental strand, 48518342 - 48518256
Alignment:
Q  338 tttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggatag 424  Q
    ||||||||| |||||||||||| |||  | |||||||||| ||||||||| |||||| ||||||| ||| |||||||||||||||||    
T  48518342 tttaagtttcacgtttgtttcagataagttctttaagtttttaaggtttcagatatgtcctttaaattttgagtttgtttcggatag 48518256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 11218163 - 11218224
Alignment:
Q  366 tcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||||||||||||||||| | | ||||||||||||||||||||| ||||||||    
T  11218163 tcctttaagtttctaaggtttcggataagtcatttaagtttcgagtttgtttcagataggtc 11218224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 335 - 424
Target Start/End: Complemental strand, 25147503 - 25147414
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggatag 424  Q
    |||||||| |||  ||||||||||| |||| |||||||||||| |||| |||| |||| | | |||||||||||||||||||||||||||    
T  25147503 tcctttaaatttcgcgtttgtttcagataggtcctttaagtttttaagatttcagataggtcttttaagtttcgagtttgtttcggatag 25147414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 350 - 427
Target Start/End: Original strand, 33623172 - 33623249
Alignment:
Q  350 gtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||  |||| |||||||||||||||||||||| |||| | |||||||||||||||||||||||  |||||||    
T  33623172 gtttgtttcgaataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcatataggtc 33623249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 324 - 436
Target Start/End: Complemental strand, 52212095 - 52211982
Alignment:
Q  324 acctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    ||||| |||| || ||||||||| | |||||| |   |||| |||||||||||||||||||||| |||  | | ||||||||||||||||||||||||||    
T  52212095 acctccccgggtcatttaagtttcatgtttgtctgggatagatcctttaagtttctaaggtttcagatgagtcatttaagtttcgagtttgtttcggata 52211996  T
Q  424 ggt-ctttaagttt 436  Q
    ||| ||||||||||    
T  52211995 ggtcctttaagttt 52211982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 427
Target Start/End: Complemental strand, 11218361 - 11218269
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||||| | |||||||||| |||  |||||||||||||||||||||| ||||   ||||||| |||||||||| |||| ||||||||    
T  11218361 tcctttaagtttcaagtttgtttcagataagtcctttaagtttctaaggtttcagatagatcctttaaatttcgagtttatttcagataggtc 11218269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 24097978 - 24098070
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||   |||| ||||  |||| |||||||||||||||||||||| |||| | |||||||||||||||||||||||  |||||||    
T  24097978 tcctttaagtttggagtttatttcggataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcatataggtc 24098070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 29777318 - 29777410
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||   |||||||||  |||| |||||||||||||||||||||| |||| | |||||| ||||||||||||||||  |||||||    
T  29777318 tcctttaagtttggagtttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttatgtttcgagtttgtttcatataggtc 29777410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 427
Target Start/End: Complemental strand, 43122893 - 43122801
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||   |||||||||  |||| || ||||||||||||||||||| |||| | |||||||||||||||||||||||  |||||||    
T  43122893 tcctttaagtttgtagtttgtttcggataggtcatttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcatataggtc 43122801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 48517986 - 48518077
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||   |||||||||  |||| |||||||| ||||||||||||| |||| || |||||||||||||||||||||| ||||||||    
T  48517986 tcctttaagtttcgagtttgtttcggataggtcctttaaatttctaaggtttcagata-gctctttaagtttcgagtttgtttcagataggtc 48518077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 368 - 427
Target Start/End: Complemental strand, 17580063 - 17580004
Alignment:
Q  368 ctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||||||||||||| |||| | ||||||||||||||||||||||| ||||||||    
T  17580063 ctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtc 17580004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 366 - 436
Target Start/End: Original strand, 24097949 - 24098020
Alignment:
Q  366 tcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaagttt 436  Q
    |||||||||||||||||||||| |||| | ||||||||||| |||||| |||||||||||| ||||||||||    
T  24097949 tcctttaagtttctaaggtttcagataagtcctttaagtttggagtttatttcggataggtcctttaagttt 24098020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 319 - 430
Target Start/End: Original strand, 48381893 - 48382003
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||| || |||||||| ||||||||| |||||||||||| |||| ||| |||||||| ||||||||  ||||   | |||||||||||||||||||||    
T  48381893 caaatatctatccggatcttttaagtttcacgtttgtttcagatagatcc-ttaagtttttaaggttttagatagatcatttaagtttcgagtttgtttc 48381991  T
Q  419 ggataggtcttt 430  Q
     |||| ||||||    
T  48381992 agatatgtcttt 48382003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 337 - 427
Target Start/End: Original strand, 10820297 - 10820387
Alignment:
Q  337 ctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||   |||||||||  |||| || ||||||||||||||||||| |||| |  |||||||||||||||||||||| ||||||||    
T  10820297 ctttaagtttcgagtttgtttcggataggtcttttaagtttctaaggtttcagataggttctttaagtttcgagtttgtttcagataggtc 10820387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 319 - 436
Target Start/End: Complemental strand, 17580172 - 17580054
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||| ||||||||||||| ||| | |||||||| | |||| |  ||||||||||||||||||  |||| |   |||||||||||||||| ||||    
T  17580172 caaatacctccccggatcctttaaattttatgtttgttttagatagattttttaagtttctaaggttttagataagttttttaagtttcgagtttatttc 17580073  T
Q  419 ggatag-gtctttaagttt 436  Q
    ||||||  |||||||||||    
T  17580072 ggatagattctttaagttt 17580054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 333 - 427
Target Start/End: Complemental strand, 33623388 - 33623294
Alignment:
Q  333 gatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||||   |||||||||  |||  ||||||||||||||||| |||| |||| | | ||||||||||||||||||||| ||||||||    
T  33623388 gatcctttaagtttcgagtttgtttcggatatgtcctttaagtttctaagatttcagataggtcatttaagtttcgagtttgtttcagataggtc 33623294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 335 - 423
Target Start/End: Original strand, 13657969 - 13658058
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatg-ccctttaagtttcgagtttgtttcggata 423  Q
    ||||||||||||   |||||||||| |||| ||||||| |||||||||||||| |||| | || ||||||||||||||||||||| ||||    
T  13657969 tcctttaagtttggagtttgtttcagataggtcctttaggtttctaaggtttcagataggtccttttaagtttcgagtttgtttcagata 13658058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 427
Target Start/End: Complemental strand, 48382325 - 48382236
Alignment:
Q  338 tttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||| |  ||||||||| |||| || ||||||||||||||||||  |||| | ||||||| ||||||||| ||||||||||||||    
T  48382325 tttaagtttcatatttgtttcagatagatcatttaagtttctaaggttttagataagtcctttaactttcgagttagtttcggataggtc 48382236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 366 - 418
Target Start/End: Complemental strand, 24098176 - 24098124
Alignment:
Q  366 tcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||||||||||||||| |||| | |||||||||||||||||||||||    
T  24098176 tcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttc 24098124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 310 - 378
Target Start/End: Complemental strand, 29777603 - 29777535
Alignment:
Q  310 aaaaaaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttc 378  Q
    |||| |||||||||||||||| || |||||||||||| |||||||||||| |||| || ||||||||||    
T  29777603 aaaataggtcaaatacctctctgggtcctttaagtttcacgtttgtttcagataggtcatttaagtttc 29777535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 316 - 436
Target Start/End: Original strand, 33623077 - 33623199
Alignment:
Q  316 ggtcaaatacctctccggatcctttaagtttaacgtttgttt-catatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttg 414  Q
    ||||||||| ||| || |||||||||||||| | |||| ||| || |||  |||||||||||||||||||||| |||| | | |||| ||||  ||||||    
T  33623077 ggtcaaataactcccctgatcctttaagtttcatgttttttttcagataaatcctttaagtttctaaggtttcagataggtcttttacgtttgtagtttg 33623176  T
Q  415 tttcggataggt-ctttaagttt 436  Q
    ||||| |||||| ||||||||||    
T  33623177 tttcgaataggtcctttaagttt 33623199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 335 - 417
Target Start/End: Complemental strand, 47220516 - 47220434
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgttt 417  Q
    |||||||||||  | |||||||||  || | ||||||||||||||||| |||| |||| | ||||||||||||||||||||||    
T  47220516 tcctttaagttggaagtttgtttcggattggtcctttaagtttctaagatttcagataggtcctttaagtttcgagtttgttt 47220434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 29777516 - 29777455
Alignment:
Q  366 tcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||||||||||||||  |||| | | ||||||||||||||||||||| ||||||||    
T  29777516 tcctttaagtttctaaggttttagataggtcatttaagtttcgagtttgtttcagataggtc 29777455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 427
Target Start/End: Complemental strand, 13658199 - 13658107
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||   |||||||||  |||  ||||||||| || | ||||||| |||| | ||||||||||||||||||||||| ||||||||    
T  13658199 tcctttaagtttcgagtttgtttcggataagtcctttaagatttttaggtttcagataggtcctttaagtttcgagtttgtttcagataggtc 13658107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 423
Target Start/End: Complemental strand, 26997499 - 26997411
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    |||||||||||| | ||||||||   |||| ||||||||||||||||||||||  ||| | | ||||||||| ||||||||||| ||||    
T  26997499 tcctttaagtttgatgtttgttttggataggtcctttaagtttctaaggtttcaaataggtcatttaagttttgagtttgtttcagata 26997411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 423
Target Start/End: Complemental strand, 50293831 - 50293775
Alignment:
Q  367 cctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    ||||||||||||||||||||| |||| | ||||||||||| ||||||||||| ||||    
T  50293831 cctttaagtttctaaggtttcagataggtcctttaagttttgagtttgtttcagata 50293775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 366 - 436
Target Start/End: Original strand, 31324161 - 31324232
Alignment:
Q  366 tcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaagttt 436  Q
    |||||||||||||||||||||  |||| | | ||||||||| | ||||||||||||||||| ||||||||||    
T  31324161 tcctttaagtttctaaggttttagataggtcatttaagttttgggtttgtttcggataggtcctttaagttt 31324232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 369 - 424
Target Start/End: Complemental strand, 54924139 - 54924084
Alignment:
Q  369 tttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggatag 424  Q
    ||||||||||||||||||| |||| |  ||||||||||||||||||||||| ||||    
T  54924139 tttaagtttctaaggtttcagataggttctttaagtttcgagtttgtttcgaatag 54924084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 426
Target Start/End: Complemental strand, 29231134 - 29231048
Alignment:
Q  340 taagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt 426  Q
    ||||||| | |||||||||| |||| | |||||||||||||| ||||| |||| | | |||| ||||||||||| |||| |||||||    
T  29231134 taagtttgaagtttgtttcagataggttctttaagtttctaaagtttcagataggtcatttatgtttcgagtttatttcagataggt 29231048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 338 - 386
Target Start/End: Original strand, 11218079 - 11218127
Alignment:
Q  338 tttaagtttaacgtttgtttcatatagttcctttaagtttctaaggttt 386  Q
    ||||||||| | |||||||||| |||| |||||||||||||||||||||    
T  11218079 tttaagttttatgtttgtttcagataggtcctttaagtttctaaggttt 11218127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 350 - 418
Target Start/End: Original strand, 47220316 - 47220384
Alignment:
Q  350 gtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||  |||| |||||||||||| ||||||||  |||| | | |||||||||||||||||||||    
T  47220316 gtttgtttcggataggtcctttaagtttttaaggttttagataggtcttttaagtttcgagtttgtttc 47220384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 336 - 427
Target Start/End: Original strand, 43122666 - 43122756
Alignment:
Q  336 cctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||||   |||||||||  |||  | ||||||||||||||| |||| |||| | |||||||||||||||||| |||| ||||||||    
T  43122666 cctttaagtttcgagtttgtttcggatatgttctttaagtttctaagatttcagataggtcctttaagtttcgagttt-tttcagataggtc 43122756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 419
Target Start/End: Original strand, 54923738 - 54923837
Alignment:
Q  320 aaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcg 419  Q
    ||||| ||||| |||| |||||||||| |||||||||| | |||| |||||||| ||| ||| |||||  ||| |  ||||||||||  |||||||||||    
T  54923738 aaatatctctctggattctttaagttttacgtttgttttaaatagatcctttaaatttttaaagtttcacataagttctttaagttttaagtttgtttcg 54923837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 377
Target Start/End: Complemental strand, 10820559 - 10820513
Alignment:
Q  331 cggatcctttaagtttaacgtttgtttcatatagttcctttaagttt 377  Q
    |||||||||||||||| | |||||||||| |||| ||||||||||||    
T  10820559 cggatcctttaagtttcatgtttgtttcagataggtcctttaagttt 10820513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 377
Target Start/End: Complemental strand, 31324520 - 31324478
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagttt 377  Q
    |||||||||||| |||||||||||| |||| ||||||||||||    
T  31324520 tcctttaagtttcacgtttgtttcagataggtcctttaagttt 31324478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 405
Target Start/End: Original strand, 37148194 - 37148260
Alignment:
Q  339 ttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtt 405  Q
    |||||||| | ||||||  || |||| |||||||||||||||||||||| |||| | ||||||||||    
T  37148194 ttaagtttcatgtttgtaacagataggtcctttaagtttctaaggtttcagataggtcctttaagtt 37148260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 436
Target Start/End: Original strand, 1771724 - 1771765
Alignment:
Q  396 cctttaagtttcgagtttgtttcggataggt-ctttaagttt 436  Q
    ||||||||||||||||||||||| ||||||| ||||||||||    
T  1771724 cctttaagtttcgagtttgtttcagataggtcctttaagttt 1771765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 383 - 427
Target Start/End: Complemental strand, 7515654 - 7515610
Alignment:
Q  383 gtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||| || | ||||||||||||||||||||||| ||||||||    
T  7515654 gtttcgggtaggtcctttaagtttcgagtttgtttcagataggtc 7515610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 398 - 430
Target Start/End: Original strand, 23232317 - 23232349
Alignment:
Q  398 tttaagtttcgagtttgtttcggataggtcttt 430  Q
    |||||||||||||||||||||||||| ||||||    
T  23232317 tttaagtttcgagtttgtttcggatatgtcttt 23232349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 383 - 427
Target Start/End: Complemental strand, 31324501 - 31324457
Alignment:
Q  383 gtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||| |||| | ||||||||||| ||||||||||||||||||||    
T  31324501 gtttcagataggtcctttaagttttgagtttgtttcggataggtc 31324457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 387
Target Start/End: Complemental strand, 37148682 - 37148630
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttc 387  Q
    |||||||||||| ||||||||  ||  ||| ||||||||||||||||||||||    
T  37148682 tcctttaagtttcacgtttgtaacagttagatcctttaagtttctaaggtttc 37148630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 2e-34; HSPs: 88)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 314 - 436
Target Start/End: Complemental strand, 15787106 - 15786985
Alignment:
Q  314 aaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagttt 413  Q
    ||||||||||||||| |||| |||||||| ||| | |||||||||| |||| |||||||||||||||||||||| |||||| ||||||||||||||||||    
T  15787106 aaggtcaaatacctccccgggtcctttaaatttcatgtttgtttcaaatagatcctttaagtttctaaggtttcagatatgtcctttaagtttcgagttt 15787007  T
Q  414 gtttcggataggtctttaagttt 436  Q
    |||| |||||||| |||||||||    
T  15787006 gtttaggataggt-tttaagttt 15786985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 319 - 436
Target Start/End: Original strand, 5482870 - 5482988
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||||||||||||||||||||| | |||||||||| |||| |||||||||||||||||||||| |||| |   |||||||||||||||||||||    
T  5482870 caaatacctctccggatcctttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtgttttaagtttcgagtttgtttc 5482969  T
Q  419 ggataggt-ctttaagttt 436  Q
    |||||| | ||||||||||    
T  5482970 ggatagatcctttaagttt 5482988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 313 - 430
Target Start/End: Original strand, 43671175 - 43671292
Alignment:
Q  313 aaaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtt 412  Q
    ||||| |||||||||| | ||||||||||||||| |||||||||||| |||| |||||||| ||| ||||||||  ||||   |||||||||||||||||    
T  43671175 aaaggccaaatacctccctggatcctttaagtttcacgtttgtttcaaataggtcctttaaatttttaaggttttagatagatcctttaagtttcgagtt 43671274  T
Q  413 tgtttcggataggtcttt 430  Q
    ||||||||||||||||||    
T  43671275 tgtttcggataggtcttt 43671292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 315 - 423
Target Start/End: Original strand, 15285788 - 15285896
Alignment:
Q  315 aggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttg 414  Q
    ||||||||||||||||||| |||||||||||| | |||||||||| |||| || | ||||||||||||| ||| |||| | |||||||||||||||||||    
T  15285788 aggtcaaatacctctccgggtcctttaagtttcaggtttgtttcagataggtcatgtaagtttctaaggcttcagataggtcctttaagtttcgagtttg 15285887  T
Q  415 tttcggata 423  Q
    |||||||||    
T  15285888 tttcggata 15285896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 335 - 436
Target Start/End: Original strand, 45638074 - 45638176
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaag 433  Q
    |||||||||||| | |||||||||| |||| |||||||||||||||| ||||| |||| | ||||||||||||||||||||||||||||||| |||||||    
T  45638074 tcctttaagtttcatgtttgtttcagataggtcctttaagtttctaacgtttcagataggtcctttaagtttcgagtttgtttcggataggtcctttaag 45638173  T
Q  434 ttt 436  Q
    |||    
T  45638174 ttt 45638176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 319 - 432
Target Start/End: Complemental strand, 7882041 - 7881928
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||| |||  ||||||||||||   |||| ||||| |||| || ||||||||||||||||||| |||| | |||||||||||||||||||||||    
T  7882041 caaatacctccccgagtcctttaagtttcgtgtttttttcagatagatcatttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttc 7881942  T
Q  419 ggataggtctttaa 432  Q
    ||||||||||||||    
T  7881941 ggataggtctttaa 7881928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 339 - 427
Target Start/End: Original strand, 28238450 - 28238538
Alignment:
Q  339 ttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||| |||||||||||| |||| |||||||||||||||||||||  |||| | ||||||||||||||||||||||||||||||||    
T  28238450 ttaagtttcacgtttgtttcagataggtcctttaagtttctaaggttttagataagtcctttaagtttcgagtttgtttcggataggtc 28238538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 35125689 - 35125581
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||| |||||||| |||||||| | |||| ||||| |||| || ||||||||||||||||||| |||| |  ||||||||||||||||||||||    
T  35125689 caaatacctccccggatccattaagtttcatgtttatttcacatagatcatttaagtttctaaggtttcagataagtgctttaagtttcgagtttgtttc 35125590  T
Q  419 ggataggtc 427  Q
    |||||||||    
T  35125589 ggataggtc 35125581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 310 - 436
Target Start/End: Complemental strand, 4603864 - 4603737
Alignment:
Q  310 aaaaaaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcga 409  Q
    ||||| ||||||||||||  ||||||||||||||||| | |||||||||| |||| ||||||||||||||||||||||  ||| | | ||||||||||||    
T  4603864 aaaaagggtcaaataccttcccggatcctttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcaaataggtcatttaagtttcga 4603765  T
Q  410 gtttgtttcggataggt-ctttaagttt 436  Q
    |||||| || |||| || ||||||||||    
T  4603764 gtttgtatcagataagtcctttaagttt 4603737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 315 - 417
Target Start/End: Complemental strand, 5483255 - 5483153
Alignment:
Q  315 aggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttg 414  Q
    |||||||||||||||| |  |||||||||||| |||||||||||| |||| ||||||||||||| |||||||| |||| | ||||||||| |||||||||    
T  5483255 aggtcaaatacctctctgagtcctttaagtttcacgtttgtttcagataggtcctttaagtttccaaggtttcagataagtcctttaagtgtcgagtttg 5483156  T
Q  415 ttt 417  Q
    |||    
T  5483155 ttt 5483153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 319 - 436
Target Start/End: Complemental strand, 11974270 - 11974152
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||||| || |||||||||||| |||||||||||| |||  || ||||||||| ||||||||| ||||   ||||||| |||||||||||||||    
T  11974270 caaatacctctctgggtcctttaagtttcacgtttgtttcagatatgtcttttaagtttataaggtttcagataaatcctttaaatttcgagtttgtttc 11974171  T
Q  419 ggataggt-ctttaagttt 436  Q
    |||||||| ||||||||||    
T  11974170 ggataggtcctttaagttt 11974152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 335 - 436
Target Start/End: Original strand, 28582396 - 28582498
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaag 433  Q
    |||||||||||| |||||||||||| || | ||||||| ||||||||||||||  ||| | ||||||||||||||||||||||||||||||| |||||||    
T  28582396 tcctttaagtttcacgtttgtttcagatgggtcctttacgtttctaaggtttcatataggtcctttaagtttcgagtttgtttcggataggtcctttaag 28582495  T
Q  434 ttt 436  Q
    |||    
T  28582496 ttt 28582498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 319 - 424
Target Start/End: Complemental strand, 7438549 - 7438444
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||| |||||||| |||||||||||| |||||||||| | |||| || ||||||||||||||||||| |||| | ||||||| |||||||||||||||    
T  7438549 caaatatctctccgggtcctttaagtttcacgtttgttttagataggtcttttaagtttctaaggtttcagataggtcctttaaatttcgagtttgtttc 7438450  T
Q  419 ggatag 424  Q
     |||||    
T  7438449 agatag 7438444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 315 - 427
Target Start/End: Original strand, 30512945 - 30513057
Alignment:
Q  315 aggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttg 414  Q
    ||||||||||||||||||  ||||||||||||   |||||||||| |||| | |||||||||||||||||||  ||||   ||||||||||| |||||||    
T  30512945 aggtcaaatacctctccgagtcctttaagtttcttgtttgtttcagatagattctttaagtttctaaggtttaagatagatcctttaagtttggagtttg 30513044  T
Q  415 tttcggataggtc 427  Q
    |||||||||||||    
T  30513045 tttcggataggtc 30513057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 316 - 432
Target Start/End: Complemental strand, 33616121 - 33616005
Alignment:
Q  316 ggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgt 415  Q
    ||||||||| |||| ||| || ||||||||| | |||||||| | |||| |||||||||||||||||||||| |||| |  |||||||||| ||||||||    
T  33616121 ggtcaaatatctcttcggctcatttaagtttcatgtttgttttagatagatcctttaagtttctaaggtttcagataggtactttaagttttgagtttgt 33616022  T
Q  416 ttcggataggtctttaa 432  Q
    |||||||||||| ||||    
T  33616021 ttcggataggtccttaa 33616005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 313 - 436
Target Start/End: Complemental strand, 45638445 - 45638321
Alignment:
Q  313 aaaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtt 412  Q
    ||||| ||||||| || || | |||||||||||| | |||||||||| |||| ||||||||||||||||||||||  ||| | ||||||||| | |||||    
T  45638445 aaaggccaaatacatccccaggtcctttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcaaataggtcctttaagtatggagtt 45638346  T
Q  413 tgtttcggataggt-ctttaagttt 436  Q
    |||||||||||||| ||||||||||    
T  45638345 tgtttcggataggtcctttaagttt 45638321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 310 - 436
Target Start/End: Original strand, 1038861 - 1038988
Alignment:
Q  310 aaaaaaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcga 409  Q
    |||||||||| ||||||||| | | | |||||||||| |||||| ||||| |||| |||||||||||| ||| ||||| ||||   ||||||||||| ||    
T  1038861 aaaaaaggtcgaatacctcttcaggttctttaagtttcacgtttatttcagatagatcctttaagtttttaaagtttcagatagatcctttaagtttgga 1038960  T
Q  410 gtttgtttcggataggtc-tttaagttt 436  Q
    |||||||||||||||||| |||||||||    
T  1038961 gtttgtttcggataggtcatttaagttt 1038988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 332 - 423
Target Start/End: Original strand, 29683588 - 29683679
Alignment:
Q  332 ggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    ||||||||||| ||| |||||||||||| |||| | |||||||||||||||||||| |||| | |||||||||||||||||||||| |||||    
T  29683588 ggatcctttaaatttcacgtttgtttcagataggttctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgttttggata 29683679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 313 - 427
Target Start/End: Original strand, 33953146 - 33953260
Alignment:
Q  313 aaaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtt 412  Q
    |||||||||||||||  | || |||||||||||| |  ||||||||| ||||  ||||||||||||||| ||||| |||| | | |||||||||||||||    
T  33953146 aaaggtcaaataccttccagggtcctttaagtttcaattttgtttcagataggccctttaagtttctaaagtttcagataggtcttttaagtttcgagtt 33953245  T
Q  413 tgtttcggataggtc 427  Q
    |||||||||||||||    
T  33953246 tgtttcggataggtc 33953260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 351 - 436
Target Start/End: Complemental strand, 33953551 - 33953465
Alignment:
Q  351 tttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaagttt 436  Q
    ||||||||| |||| |||||||||||||||| ||||| |||| | ||||||||||||||||||||||||||||||| ||||||||||    
T  33953551 tttgtttcagatagatcctttaagtttctaaagtttcagataggtcctttaagtttcgagtttgtttcggataggtcctttaagttt 33953465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 337 - 417
Target Start/End: Complemental strand, 15286166 - 15286086
Alignment:
Q  337 ctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgttt 417  Q
    |||||||||| | ||||||||||||||| |||||||||||| ||||||||| |||| | ||||||||||||||||||||||    
T  15286166 ctttaagtttcatgtttgtttcatatagatcctttaagtttataaggtttcagataggtcctttaagtttcgagtttgttt 15286086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 351 - 430
Target Start/End: Complemental strand, 5248241 - 5248162
Alignment:
Q  351 tttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtcttt 430  Q
    ||||||||  |||| |||||||||||||||||||||| |||| | ||||||||||||||||||||||| |||||||||||    
T  5248241 tttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtcttt 5248162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 319 - 436
Target Start/End: Complemental strand, 1039251 - 1039133
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||| | || |||||||||||| |||||||||||| |||  |  |||| |||||||||||||  |||| | |||||||||||||||||||||||    
T  1039251 caaatacctccctgggtcctttaagtttcacgtttgtttcagataaattttttaggtttctaaggttttagataggtcctttaagtttcgagtttgtttc 1039152  T
Q  419 ggataggt-ctttaagttt 436  Q
    ||||| || ||||||||||    
T  1039151 ggatatgtcctttaagttt 1039133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 319 - 436
Target Start/End: Original strand, 11973918 - 11974036
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||| ||||||| ||||||||| | |||||||||| |||  |||||||||||||||||||||| |||| | | ||||| |||  ||||||||||    
T  11973918 caaatacctccccggatcatttaagtttcatgtttgtttcagataaatcctttaagtttctaaggtttcagataagtcttttaaatttgaagtttgtttc 11974017  T
Q  419 ggataggt-ctttaagttt 436  Q
    |||||| | ||||||||||    
T  11974018 ggatagatcctttaagttt 11974036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 335 - 436
Target Start/End: Complemental strand, 28182488 - 28182386
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaag 433  Q
    |||||||||||| |||||||||||| |||| |||||||||||||||||||||  |||| | | ||||||||| ||||||||||| |||| || |||||||    
T  28182488 tcctttaagtttcacgtttgtttcagataggtcctttaagtttctaaggttttagataggtcttttaagtttggagtttgtttcagatatgtcctttaag 28182389  T
Q  434 ttt 436  Q
    |||    
T  28182388 ttt 28182386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 319 - 436
Target Start/End: Complemental strand, 29684002 - 29683885
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||| | || |||||| ||||| | |||||||||| |||| | ||||||||||| ||| |||| |||||| |||||||||||||||||||||||    
T  29684002 caaatacctcccggggtcctttcagtttcatgtttgtttcagatagatactttaagtttc-aagatttcagatatgtcctttaagtttcgagtttgtttc 29683904  T
Q  419 ggataggt-ctttaagttt 436  Q
     ||||||| ||||||||||    
T  29683903 agataggtcctttaagttt 29683885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 335 - 436
Target Start/End: Original strand, 34334544 - 34334646
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaag 433  Q
    |||||||||||| | |||||||||| |||| |||||||||||| ||||||||| |||| | | |||||||||||||||||||| ||||| || |||||||    
T  34334544 tcctttaagtttcatgtttgtttcagatagatcctttaagtttttaaggtttcagataggtcatttaagtttcgagtttgtttgggatatgtcctttaag 34334643  T
Q  434 ttt 436  Q
    |||    
T  34334644 ttt 34334646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 335 - 436
Target Start/End: Complemental strand, 42553789 - 42553688
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaag 433  Q
    |||||||||||| || ||||||||| |||| || ||||||||| ||||||||| |||| | |||||||||||||||||||||| |||||||| |||||||    
T  42553789 tcctttaagtttcacatttgtttcagataggtcatttaagtttataaggtttcagataggtcctttaagtttcgagtttgttt-ggataggtcctttaag 42553691  T
Q  434 ttt 436  Q
    |||    
T  42553690 ttt 42553688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 36387522 - 36387414
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaagg-tttcggatatgccctttaagtttcgagtttgttt 417  Q
    |||||||||||| || ||| |||| ||| |||||||||||| |||| |||||||||||||||| | |||| |||||| | ||||||||||||||||||||    
T  36387522 caaatacctctctgg-tccattaaatttcacgtttgtttcagataggtcctttaagtttctaaagatttcagatatgtcttttaagtttcgagtttgttt 36387424  T
Q  418 cggataggtc 427  Q
    | ||||||||    
T  36387423 cagataggtc 36387414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 335 - 427
Target Start/End: Complemental strand, 1844594 - 1844502
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||||| | |||| ||||| |||| |||||||||||||||||||||| |||  | |||||||||||  |||||||||||||||||||    
T  1844594 tcctttaagtttcatgtttatttcagatagatcctttaagtttctaaggtttcagatcggtcctttaagtttgaagtttgtttcggataggtc 1844502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 28582456 - 28582548
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||   |||||||||  |||| ||||||||||||||| |||||| |||| | ||||||||||||||||||||||| ||||||||    
T  28582456 tcctttaagtttcgagtttgtttcggataggtcctttaagtttctatggtttcagataggtcctttaagtttcgagtttgtttcagataggtc 28582548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 335 - 419
Target Start/End: Complemental strand, 30513253 - 30513169
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcg 419  Q
    |||||||||||| |||||||||||| ||   |||||||||||||||||||||| |||| | ||||||||||| ||||||||||||    
T  30513253 tcctttaagtttcacgtttgtttcagatgagtcctttaagtttctaaggtttcagataggtcctttaagttttgagtttgtttcg 30513169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 335 - 427
Target Start/End: Complemental strand, 30823731 - 30823639
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||||| |||||||||| | |||| || ||||| ||||||||||||| |||| |  ||||||||||||||||| |||||||||||||    
T  30823731 tcctttaagttttacgtttgttttagatagatcatttaattttctaaggtttcagataggttctttaagtttcgagtttatttcggataggtc 30823639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 319 - 427
Target Start/End: Original strand, 30851060 - 30851168
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||  |||| |||||||||||| |  ||||||||| |||| |||||||||||| ||| ||||| |||| | |||||||||||| ||||||||||    
T  30851060 caaataccttcccgggtcctttaagtttcatatttgtttcagatagatcctttaagtttttaacgtttcagataggtcctttaagtttcaagtttgtttc 30851159  T
Q  419 ggataggtc 427  Q
     ||||||||    
T  30851160 agataggtc 30851168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 315 - 427
Target Start/End: Original strand, 33615734 - 33615845
Alignment:
Q  315 aggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttg 414  Q
    ||||||||||| |||| || |||||||||||| |||||| ||||| |||  | ||||||||||||||||||||  |||   ||||||| |||||||||||    
T  33615734 aggtcaaatacttctctgg-tcctttaagtttcacgtttatttcagataagttctttaagtttctaaggtttcatatagatcctttaaatttcgagtttg 33615832  T
Q  415 tttcggataggtc 427  Q
    |||||||||||||    
T  33615833 tttcggataggtc 33615845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 335 - 427
Target Start/End: Complemental strand, 43671486 - 43671394
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||||| | |||||||||  |||| |||||||||||||||||||||| |||| | | ||||| ||||||||||||||| ||||||||    
T  43671486 tcctttaagtttgaagtttgtttcgaataggtcctttaagtttctaaggtttcagataggtcatttaaatttcgagtttgtttcagataggtc 43671394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 320 - 436
Target Start/End: Complemental strand, 43671565 - 43671444
Alignment:
Q  320 aaatacctctccggatcctttaagtttaacgtttgtttca----tatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgt 415  Q
    ||||||||||||||||||||||||||| | |||| ||| |    ||||| |||||||||||||||||||||  |||| | |||||||||||  |||||||    
T  43671565 aaatacctctccggatcctttaagtttcatgtttattttagatatatagatcctttaagtttctaaggttttagataggtcctttaagtttgaagtttgt 43671466  T
Q  416 ttcggataggt-ctttaagttt 436  Q
    |||| |||||| ||||||||||    
T  43671465 ttcgaataggtcctttaagttt 43671444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 319 - 427
Target Start/End: Original strand, 43865351 - 43865459
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||  |||| |||||||| ||| | |||||||||| |||| || ||||||||| ||||||||| |||| | |||||||||||||| ||||||||    
T  43865351 caaatacctacccgggtcctttaaatttcatgtttgtttcagatagatcttttaagtttttaaggtttcagataggtcctttaagtttcgattttgtttc 43865450  T
Q  419 ggataggtc 427  Q
     ||||||||    
T  43865451 agataggtc 43865459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 308 - 423
Target Start/End: Original strand, 28182113 - 28182227
Alignment:
Q  308 ttaaaaaaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttc 407  Q
    |||||| |||| |||||||||   || |||||||||||| |||||||||||| |||| || ||||| ||||||||||||  |||||| |||||||||||     
T  28182113 ttaaaataggttaaatacctcaatgggtcctttaagttttacgtttgtttcaaataggtc-tttaaatttctaaggttttagatatgtcctttaagtttg 28182211  T
Q  408 gagtttgtttcggata 423  Q
     |||||||||||||||    
T  28182212 aagtttgtttcggata 28182227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 352 - 427
Target Start/End: Complemental strand, 28238788 - 28238713
Alignment:
Q  352 ttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||  |||| |||||||||||||||||||||| |||| | ||||||||||||||||||||||| ||||||||    
T  28238788 ttgtttcgcataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtc 28238713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 335 - 436
Target Start/End: Complemental strand, 30851363 - 30851261
Alignment:
Q  335 tcctttaagtttaacgtttgtttcata-tagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc-tttaa 432  Q
    ||||||||||||||||||||||||| | ||  |||||||| ||||||||||||| |||| | |||||||||||||||||| |||||||||| || |||||    
T  30851363 tcctttaagtttaacgtttgtttcagaatatgtcctttaaatttctaaggtttcagataggtcctttaagtttcgagttt-tttcggatagatcatttaa 30851265  T
Q  433 gttt 436  Q
    ||||    
T  30851264 gttt 30851261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 333 - 427
Target Start/End: Original strand, 1038944 - 1039038
Alignment:
Q  333 gatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||||   |||||||||  |||| || ||||||||| ||||||||| |||| | |||||||||||| |||||||||||||||||||    
T  1038944 gatcctttaagtttggagtttgtttcggataggtcatttaagtttataaggtttcagataggtcctttaagtttccagtttgtttcggataggtc 1039038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 331 - 436
Target Start/End: Original strand, 5247925 - 5248031
Alignment:
Q  331 cggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctt 429  Q
    |||||||||||||||| | |||||||||| |||  || |||||||||| |||||||| |||| | |||||||||||  |||||||||||||||| | |||    
T  5247925 cggatcctttaagttttatgtttgtttcagataaatcatttaagtttcgaaggtttcagataggtcctttaagtttgaagtttgtttcggatagatcctt 5248024  T
Q  430 taagttt 436  Q
    |||||||    
T  5248025 taagttt 5248031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 417
Target Start/End: Complemental strand, 33953507 - 33953425
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgttt 417  Q
    ||||||||||||   |||||||||  |||| |||||||||||||||||||||| |||| |||||||||| |||||||||||||    
T  33953507 tcctttaagtttcgagtttgtttcggataggtcctttaagtttctaaggtttcagataagccctttaagcttcgagtttgttt 33953425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 436
Target Start/End: Complemental strand, 40343790 - 40343689
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaag 433  Q
    ||||||||||||   |||||||| | |||| | |||||||||||||||||||| |||| |  |||||||||||||||||||||||||||||| |||||||    
T  40343790 tcctttaagttttgagtttgttttagataggtgctttaagtttctaaggtttcagata-ggtctttaagtttcgagtttgtttcggataggtgctttaag 40343692  T
Q  434 ttt 436  Q
    |||    
T  40343691 ttt 40343689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 5248078 - 5248139
Alignment:
Q  366 tcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||||||||||||||| |||| | ||||||||||||||||||||||| ||||||||    
T  5248078 tcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtc 5248139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 354 - 427
Target Start/End: Original strand, 7438323 - 7438396
Alignment:
Q  354 gtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||| |||| |||||||||||||||||||||| |||| | | ||||||||||||||||||||| ||||||||    
T  7438323 gtttcagataggtcctttaagtttctaaggtttcagataggtcttttaagtttcgagtttgtttcagataggtc 7438396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 350 - 427
Target Start/End: Complemental strand, 11974179 - 11974102
Alignment:
Q  350 gtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||  |||| |||||||||||||||||||||| ||||   ||||||||||||||||||||||| ||||||||    
T  11974179 gtttgtttcggataggtcctttaagtttctaaggtttcagatagatcctttaagtttcgagtttgtttcagataggtc 11974102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 407
Target Start/End: Original strand, 35125340 - 35125428
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttc 407  Q
    |||||||||| | || |||||||||||||| |||||||||| || | |||||||||||||||| ||||| |||| | ||||||||||||    
T  35125340 caaatacctccctgggtcctttaagtttaatgtttgtttcagatcggtcctttaagtttctaaagtttcagataggtcctttaagtttc 35125428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 45638134 - 45638226
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||   |||||||||  |||| |||||||||||||||| ||||| |||| | |||||||| |||||||||||||| ||||||||    
T  45638134 tcctttaagtttcgagtttgtttcggataggtcctttaagtttctaaagtttcagataggtcctttaagattcgagtttgtttcagataggtc 45638226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 319 - 417
Target Start/End: Original strand, 7881615 - 7881713
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgttt 417  Q
    |||||| |||||  |||| ||||||||| |||||||||||| ||||  | ||||| ||||||||||||| ||||   ||||||||||||||||||||||    
T  7881615 caaatatctctctagatcatttaagtttcacgtttgtttcaaataggccttttaaatttctaaggtttcagatagatcctttaagtttcgagtttgttt 7881713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 333 - 423
Target Start/End: Original strand, 30513023 - 30513113
Alignment:
Q  333 gatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    ||||||||||||||   |||||||||  |||| ||||||| |||||||||||||| |||| | |||||||| |||||||||||||| ||||    
T  30513023 gatcctttaagtttggagtttgtttcggataggtcctttatgtttctaaggtttcagataggtcctttaaggttcgagtttgtttcagata 30513113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 337 - 427
Target Start/End: Complemental strand, 35125611 - 35125521
Alignment:
Q  337 ctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||   |||||||||  |||| |||||||| ||||||||||||| |||| | | ||||||||||||||||||||| ||||||||    
T  35125611 ctttaagtttcgagtttgtttcggataggtcctttaaatttctaaggtttcagataggtcttttaagtttcgagtttgtttcagataggtc 35125521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 333 - 427
Target Start/End: Original strand, 43671255 - 43671349
Alignment:
Q  333 gatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||||   |||||||||  |||| || ||||||||||||||||||| |||| | | |||||||||| |||||||||| ||||||||    
T  43671255 gatcctttaagtttcgagtttgtttcggataggtcttttaagtttctaaggtttcagataggtcttttaagtttcaagtttgtttcagataggtc 43671349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 5482961 - 5483034
Alignment:
Q  350 gtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    |||||||||  |||| |||||||||||| ||||||||| |||| | ||||||||||||||||||||||| ||||    
T  5482961 gtttgtttcggatagatcctttaagtttataaggtttcagataagtcctttaagtttcgagtttgtttcagata 5483034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 423
Target Start/End: Complemental strand, 45638348 - 45638275
Alignment:
Q  350 gtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    |||||||||  |||| |||||||||||||||||||||| ||||   ||||||||||||||||||||||| ||||    
T  45638348 gtttgtttcggataggtcctttaagtttctaaggtttcagatagatcctttaagtttcgagtttgtttcagata 45638275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 361 - 436
Target Start/End: Original strand, 4603516 - 4603592
Alignment:
Q  361 atagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaagttt 436  Q
    |||| |||||||| ||| ||||||||| |||| | |||||||||||||||||| |||||||||||| ||||||||||    
T  4603516 ataggtcctttaaatttttaaggtttcagataggtcctttaagtttcgagtttctttcggataggtcctttaagttt 4603592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 335 - 407
Target Start/End: Original strand, 5247989 - 5248061
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttc 407  Q
    |||||||||||| | |||||||||  |||| |||||||||||||||||||||| |||| | ||||||||||||    
T  5247989 tcctttaagtttgaagtttgtttcggatagatcctttaagtttctaaggtttcagataggtcctttaagtttc 5248061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 44436659 - 44436595
Alignment:
Q  366 tcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtcttt 430  Q
    |||||||||||||||| ||||| |||| | |||||||||||||||||||||||  ||||||||||    
T  44436659 tcctttaagtttctaaagtttcagataggtcctttaagtttcgagtttgtttcaaataggtcttt 44436595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 366 - 436
Target Start/End: Complemental strand, 34334862 - 34334791
Alignment:
Q  366 tcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc-tttaagttt 436  Q
    |||||||||||||||||||||| |||| | ||||||| |||||||||||||||| ||| ||| |||||||||    
T  34334862 tcctttaagtttctaaggtttcagataggtcctttaaatttcgagtttgtttcgtataagtcatttaagttt 34334791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 406
Target Start/End: Original strand, 44436417 - 44436504
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagttt 406  Q
    |||||||||  |||| |||||||| ||| | |||| ||||| |||| |||||||||||||||||||||| |||| | |||||||||||    
T  44436417 caaataccttcccgggtcctttaaatttcatgtttttttcagatagatcctttaagtttctaaggtttcagataagtcctttaagttt 44436504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 350 - 424
Target Start/End: Complemental strand, 28182413 - 28182340
Alignment:
Q  350 gtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggatag 424  Q
    |||||||||| |||  |||||||||||||||||||||| |||| |  |||||||||||||||||||||| |||||    
T  28182413 gtttgtttcagatatgtcctttaagtttctaaggtttcagata-gttctttaagtttcgagtttgtttcagatag 28182340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 361 - 427
Target Start/End: Complemental strand, 42553704 - 42553638
Alignment:
Q  361 atagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||| |||||||||||||||| ||||| ||||   ||||||||||||||||||||||| ||||||||    
T  42553704 ataggtcctttaagtttctaaagtttcagatagatcctttaagtttcgagtttgtttcagataggtc 42553638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 427
Target Start/End: Complemental strand, 5483160 - 5483083
Alignment:
Q  350 gtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||| | |||| ||||||||||||||| ||||||  ||| | ||||||||||| ||||||||||| ||||||||    
T  5483160 gtttgttttaaataggtcctttaagtttctacggtttcatataggtcctttaagttttgagtttgtttcagataggtc 5483083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 354 - 423
Target Start/End: Complemental strand, 9144227 - 9144158
Alignment:
Q  354 gtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    |||||| |||| || |||||||||||| |||||| |||| | ||| ||||||||||||||||||||||||    
T  9144227 gtttcaaataggtcttttaagtttctatggtttcagataggtcctctaagtttcgagtttgtttcggata 9144158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 427
Target Start/End: Complemental strand, 34334818 - 34334741
Alignment:
Q  350 gtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||| ||||  || ||||||||||||||||||  |||||| |||||||||||| | |||||||| ||||||||    
T  34334818 gtttgtttcgtataagtcatttaagtttctaaggttttagatatgtcctttaagtttcaaatttgtttcagataggtc 34334741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 354 - 427
Target Start/End: Original strand, 35125404 - 35125477
Alignment:
Q  354 gtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||| |||| |||||||||||||||||||||| |||  | | |||||||||||||||| |||| ||||||||    
T  35125404 gtttcagataggtcctttaagtttctaaggtttcagatgggtcatttaagtttcgagtttatttcagataggtc 35125477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 320 - 436
Target Start/End: Complemental strand, 40343865 - 40343748
Alignment:
Q  320 aaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcg 419  Q
    ||||||||  ||| ||||||||||||| | |||||||||   ||| |||||| | ||||||||||||  |||| | ||||||||||| ||||||||||      
T  40343865 aaataccttcccgaatcctttaagtttcatgtttgtttctggtagatccttttaatttctaaggttttagataggtcctttaagttttgagtttgtttta 40343766  T
Q  420 gataggt-ctttaagttt 436  Q
    ||||||| ||||||||||    
T  40343765 gataggtgctttaagttt 40343748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 423
Target Start/End: Complemental strand, 1039175 - 1039087
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    ||||||||||||   |||||||||  |||  |||||||||||||||||||| | |||||| |||||| ||||| |||||||||| ||||    
T  1039175 tcctttaagtttcgagtttgtttcggatatgtcctttaagtttctaaggttacagatatgtcctttatgtttcaagtttgtttcagata 1039087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 4603748 - 4603684
Alignment:
Q  366 tcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtcttt 430  Q
    |||||||||||||||| ||||| |||| | |||||||||||| || ||||||| |||||||||||    
T  4603748 tcctttaagtttctaatgtttcagataggtcctttaagtttctagcttgtttcagataggtcttt 4603684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 335 - 386
Target Start/End: Original strand, 4603461 - 4603512
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggttt 386  Q
    |||||||||||| |||||||||||  |||| |||||||||||||||||||||    
T  4603461 tcctttaagtttcacgtttgtttcggataggtcctttaagtttctaaggttt 4603512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 335 - 417
Target Start/End: Original strand, 28182199 - 28182282
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttccttt-aagtttctaaggtttcggatatgccctttaagtttcgagtttgttt 417  Q
    |||||||||||| | |||||||||  |||  |||||| |||||||||||||||  |||| | ||||||||||||||||||||||    
T  28182199 tcctttaagtttgaagtttgtttcggatatgtccttttaagtttctaaggttttagataggtcctttaagtttcgagtttgttt 28182282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 366 - 425
Target Start/End: Original strand, 34334635 - 34334694
Alignment:
Q  366 tcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggatagg 425  Q
    |||||||||||||||||||||| |||| | | |||||||||| |||||||||| ||||||    
T  34334635 tcctttaagtttctaaggtttcagataggtcatttaagtttctagtttgtttcagatagg 34334694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 337 - 436
Target Start/End: Complemental strand, 40343729 - 40343631
Alignment:
Q  337 ctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtctttaagttt 436  Q
    ||||||||||   |||||||||  |||| | |||||||||||||||||||  ||||   ||||||||| |||||||||||||| |||||| |||||||||    
T  40343729 ctttaagtttcgagtttgtttcggataggtgctttaagtttctaaggttttagatagatcctttaagtatcgagtttgtttcgaataggt-tttaagttt 40343631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 44436493 - 44436553
Alignment:
Q  366 tcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||||| ||||||||| |||||| | |||||||||| |||||||||| ||||||||    
T  44436493 tcctttaagtttttaaggtttcagatatgtc-tttaagtttctagtttgtttcagataggtc 44436553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 4603550 - 4603642
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||   |||| ||||  |||| |||||||||||| ||||||||| |||| |  |||||| ||||||||||||||| | ||||||    
T  4603550 tcctttaagtttcgagtttctttcggataggtcctttaagtttttaaggtttcagataggttctttaattttcgagtttgtttcagttaggtc 4603642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 430
Target Start/End: Original strand, 36387260 - 36387372
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgag-tttgttt 417  Q
    ||||||||||| ||| |  ||||||||| | |||||| ||| |||| ||||||||||||  ||| |||| |||| |  |||||||||||||| ||| |||    
T  36387260 caaatacctcttcgggttttttaagtttcatgtttgtgtcagatagatcctttaagttttcaagatttcagataggttctttaagtttcgagtttttttt 36387359  T
Q  418 cggataggtcttt 430  Q
    | |||||||||||    
T  36387360 cagataggtcttt 36387372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 436
Target Start/End: Complemental strand, 5248286 - 5248215
Alignment:
Q  366 tcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaagttt 436  Q
    |||||||| |||| ||||||||  ||| | | |||||||||||| |||||||||||||||| ||||||||||    
T  5248286 tcctttaaatttccaaggtttcaaataggtcttttaagtttcgaatttgtttcggataggtcctttaagttt 5248215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 436
Target Start/End: Complemental strand, 28238860 - 28238763
Alignment:
Q  338 tttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaagttt 436  Q
    ||||||||| | |||||||||| |||| || ||||||||| |||| |||| |||| | ||||| ||||||||| |||||||| |||||| ||||||||||    
T  28238860 tttaagtttcatgtttgtttcagatagatc-tttaagtttttaagatttcagataggtcctttcagtttcgag-ttgtttcgcataggtcctttaagttt 28238763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 427
Target Start/End: Complemental strand, 30851269 - 30851213
Alignment:
Q  369 tttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||||||||| |||| | ||||||  ||||||||||||||| ||||||||    
T  30851269 tttaagtttctaaggtttcagataggaccttta--tttcgagtttgtttcagataggtc 30851213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 427
Target Start/End: Original strand, 30823429 - 30823487
Alignment:
Q  369 tttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||| ||||||||| |||    ||||||||||||||||||||||| ||||||||    
T  30823429 tttaagtttttaaggtttcagattaatcctttaagtttcgagtttgtttcagataggtc 30823487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 427
Target Start/End: Original strand, 33615811 - 33615905
Alignment:
Q  333 gatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||| |||   |||||||||  |||| |||||||| ||| |||||||||  ||| | ||||||||||| ||||||||||  ||||||||    
T  33615811 gatcctttaaatttcgagtttgtttcggataggtcctttaaatttttaaggtttcatataggtcctttaagttttgagtttgtttgagataggtc 33615905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 427
Target Start/End: Complemental strand, 33616040 - 33615950
Alignment:
Q  337 ctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||   |||||||||  |||| ||||| || ||||||||||||| |||| |  ||||||||||||| |||||||  ||||||||    
T  33616040 ctttaagttttgagtttgtttcggataggtccttaaaatttctaaggtttcagataggttctttaagtttcgaatttgttttagataggtc 33615950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 407
Target Start/End: Original strand, 5248037 - 5248090
Alignment:
Q  354 gtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttc 407  Q
    |||||| |||| |||||||||||||||||||||| ||||   ||||||||||||    
T  5248037 gtttcagataggtcctttaagtttctaaggtttcagataaatcctttaagtttc 5248090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 392
Target Start/End: Original strand, 30823329 - 30823402
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggata 392  Q
    |||| ||||||||||||||||||||||| | || || || | |||| ||||| |||||| ||||||||| ||||    
T  30823329 caaacacctctccggatcctttaagtttcatgtctgatttagatagatccttaaagtttttaaggtttcagata 30823402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 418
Target Start/End: Complemental strand, 40343639 - 40343590
Alignment:
Q  369 tttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    ||||||||||||| ||||| ||||   |||||||||||||||||||||||    
T  40343639 tttaagtttctaaagtttcagatagttcctttaagtttcgagtttgtttc 40343590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 383 - 427
Target Start/End: Original strand, 11974013 - 11974057
Alignment:
Q  383 gtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||   ||||||||||||||||||||||| ||||||||    
T  11974013 gtttcggatagatcctttaagtttcgagtttgtttcagataggtc 11974057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 417
Target Start/End: Complemental strand, 15786993 - 15786945
Alignment:
Q  369 tttaagtttctaaggtttcggatatgccctttaagtttcgagtttgttt 417  Q
    ||||||||||||| ||||  |||| | ||||||||||||||||||||||    
T  15786993 tttaagtttctaaagttttagataggtcctttaagtttcgagtttgttt 15786945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 5e-32; HSPs: 95)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 311 - 436
Target Start/End: Complemental strand, 18598649 - 18598523
Alignment:
Q  311 aaaaaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgag 410  Q
    ||||||| |||||||||| |||| |||||||||||| | |||||||| | |||| |||| ||||||||||||||||| |||| | |||||||||||||||    
T  18598649 aaaaaggccaaatacctccccgggtcctttaagtttcaagtttgttttagataggtcctctaagtttctaaggtttcagataggtcctttaagtttcgag 18598550  T
Q  411 tttgtttcggataggt-ctttaagttt 436  Q
    |||||||||||||||| ||||||||||    
T  18598549 tttgtttcggataggtcctttaagttt 18598523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 312 - 436
Target Start/End: Original strand, 14336616 - 14336741
Alignment:
Q  312 aaaaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagt 411  Q
    ||||||||||||||||| |  | |||||||||||| |||||||||||| |||| |||||||||||| ||| ||||| |||| | ||||||||||||||||    
T  14336616 aaaaggtcaaatacctccctaggtcctttaagttttacgtttgtttcagataggtcctttaagtttttaaagtttcagataggtcctttaagtttcgagt 14336715  T
Q  412 ttgtttcggataggt-ctttaagttt 436  Q
    ||||||||||||||| ||||||||||    
T  14336716 ttgtttcggataggtcctttaagttt 14336741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 319 - 427
Target Start/End: Original strand, 13846594 - 13846702
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    ||||||||||||||||||||||||| || | |||||||||| |||| |||||||||||||||||||||| |||| | | |||||||||||||||||||||    
T  13846594 caaatacctctccggatcctttaaggttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcttttaagtttcgagtttgtttc 13846693  T
Q  419 ggataggtc 427  Q
     ||||||||    
T  13846694 agataggtc 13846702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 319 - 436
Target Start/End: Original strand, 34979478 - 34979596
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||| | || |||||||||||| |||||||||||| |||| |||||||||||||||||||||| |||| | |||||||||||||||||||||||    
T  34979478 caaatacctccctgggtcctttaagtttcacgtttgtttcagataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttc 34979577  T
Q  419 ggataggt-ctttaagttt 436  Q
    | ||| || ||||||||||    
T  34979578 gaataagtcctttaagttt 34979596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 314 - 436
Target Start/End: Complemental strand, 15631754 - 15631632
Alignment:
Q  314 aaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagttt 413  Q
    |||| |||||||||  |||| |||||||||||| | |||||||||| |||| |||||||||||| ||||||||| |||| | ||||||||||||||||||    
T  15631754 aaggccaaataccttcccgg-tcctttaagtttcatgtttgtttcacatagatcctttaagtttttaaggtttcagataggtcctttaagtttcgagttt 15631656  T
Q  414 gtttcggataggt-ctttaagttt 436  Q
    ||||||||||||| ||||||||||    
T  15631655 gtttcggataggtcctttaagttt 15631632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 316 - 436
Target Start/End: Complemental strand, 7633145 - 7633025
Alignment:
Q  316 ggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgt 415  Q
    |||||||| |||||| ||||| ||||||||| ||| |||||||| |||| |||||||||||||||||||||  |||| | |||||||||||| |||||||    
T  7633145 ggtcaaatgcctctctggatcttttaagttttacgattgtttca-ataggtcctttaagtttctaaggttttagataggtcctttaagtttcaagtttgt 7633047  T
Q  416 ttcggataggt-ctttaagttt 436  Q
    ||||||||||| ||||||||||    
T  7633046 ttcggataggtcctttaagttt 7633025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 332 - 436
Target Start/End: Original strand, 20421072 - 20421177
Alignment:
Q  332 ggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-cttt 430  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||  ||||  ||| | ||||||||||||||||||||||| ||||||| ||||    
T  20421072 ggatcctttaagtttaacgtttgtttcagataggtcctttaagtttctaaaatttcatataggtcctttaagtttcgagtttgtttcagataggtccttt 20421171  T
Q  431 aagttt 436  Q
    ||||||    
T  20421172 aagttt 20421177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 317 - 436
Target Start/End: Original strand, 21956019 - 21956140
Alignment:
Q  317 gtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttg-t 415  Q
    |||||||| ||| | ||||||||||||||| | |||||||||| |||| |||||||||||||||||||||| |||| | ||||||| ||||||||||| |    
T  21956019 gtcaaatatctccctggatcctttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaaatttcgagtttgtt 21956118  T
Q  416 ttcggataggt-ctttaagttt 436  Q
    ||||||||||| ||||||||||    
T  21956119 ttcggataggtcctttaagttt 21956140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 319 - 436
Target Start/End: Complemental strand, 25154903 - 25154786
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||| |||| |||||||||||| | |||||||||| |||| || ||||||||||||||||||| || | | |||||||| || |||||||||||    
T  25154903 caaatacctccccgggtcctttaagtttcatgtttgtttcagatagatcttttaagtttctaaggtttcagacaggtcctttaagattagagtttgtttc 25154804  T
Q  419 ggataggtctttaagttt 436  Q
    ||||||||| ||||||||    
T  25154803 ggataggtccttaagttt 25154786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 315 - 427
Target Start/End: Original strand, 5322495 - 5322607
Alignment:
Q  315 aggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttg 414  Q
    |||||||||||||| ||||||||||||||||| | |||||||| | |||| |||||||| ||||||||||| | |||| | ||||||||||| |||||||    
T  5322495 aggtcaaatacctccccggatcctttaagtttcatgtttgtttaaaatagatcctttaaatttctaaggttgcagataggtcctttaagttttgagtttg 5322594  T
Q  415 tttcggataggtc 427  Q
    ||| |||||||||    
T  5322595 ttttggataggtc 5322607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 337 - 436
Target Start/End: Complemental strand, 40289784 - 40289684
Alignment:
Q  337 ctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc-tttaagtt 435  Q
    |||||||||| | |||||||||| |||| ||||||||||||||||| ||||||||| | ||||||||||| |||||||||||||||||||| ||||||||    
T  40289784 ctttaagtttcatgtttgtttcagatagatcctttaagtttctaagatttcggataggtcctttaagttttgagtttgtttcggataggtcatttaagtt 40289685  T
Q  436 t 436  Q
    |    
T  40289684 t 40289684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 319 - 436
Target Start/End: Complemental strand, 14337004 - 14336886
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||| || | |||||||||||| | |||||||||| |||| |||||||||||||||||||||| |||  | |||||||||||  ||||||||||    
T  14337004 caaatacctccccaggtcctttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagatgggtcctttaagtttgaagtttgtttc 14336905  T
Q  419 ggataggt-ctttaagttt 436  Q
    |||||||| ||||||||||    
T  14336904 ggataggtcctttaagttt 14336886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 335 - 436
Target Start/End: Complemental strand, 26554042 - 26553940
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaag 433  Q
    |||||||||||| | |||| ||||| |||| |||||||||||||||||||||| | || | ||||||||||||||||||||||||||||||| |||||||    
T  26554042 tcctttaagtttcatgtttatttcagatagatcctttaagtttctaaggtttcagttaggtcctttaagtttcgagtttgtttcggataggtcctttaag 26553943  T
Q  434 ttt 436  Q
    |||    
T  26553942 ttt 26553940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 338 - 427
Target Start/End: Complemental strand, 53856829 - 53856740
Alignment:
Q  338 tttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||| |||||||||||| |||| |||||||||||||||| ||||| |||| | ||||||||| ||||||||||||||||||||||    
T  53856829 tttaagtttcacgtttgtttcagatagatcctttaagtttctaaagtttcagataggtcctttaagtgtcgagtttgtttcggataggtc 53856740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 319 - 408
Target Start/End: Complemental strand, 55358641 - 55358552
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcg 408  Q
    |||||||||| | ||||| ||||||||| |||||||||||| |||| |||||||||||||||||||||| |||||| |||||||||||||    
T  55358641 caaatacctccctggatcttttaagtttcacgtttgtttcagatagatcctttaagtttctaaggtttcagatatgtcctttaagtttcg 55358552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 335 - 427
Target Start/End: Complemental strand, 14336928 - 14336836
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||||| | |||||||||  |||| |||||||||||||||||||||| |||| | ||||||||||||||||||||||| ||||||||    
T  14336928 tcctttaagtttgaagtttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtc 14336836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 312 - 436
Target Start/End: Complemental strand, 25363672 - 25363546
Alignment:
Q  312 aaaaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttc--ctttaagtttctaaggtttcggatatgccctttaagtttcga 409  Q
    |||||| |||||||||||| ||||||||||||||| | |||||||||| |||| ||  |||||||||||||||||||| ||||   ||||||||||||||    
T  25363672 aaaaggccaaatacctctc-ggatcctttaagtttcatgtttgtttcagatagatctcctttaagtttctaaggtttcagatagatcctttaagtttcga 25363574  T
Q  410 gtttgtttcggataggt-ctttaagttt 436  Q
    |||||||||| ||| || ||||||||||    
T  25363573 gtttgtttcgaatatgtcctttaagttt 25363546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 313 - 423
Target Start/End: Original strand, 27389779 - 27389889
Alignment:
Q  313 aaaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtt 412  Q
    ||||| ||||||||||   || ||| ||||||||||||||||||||| |||| |||||||||||| |||| |||| |||| | |||||||||||||||||    
T  27389779 aaaggccaaatacctccatgggtccattaagtttaacgtttgtttcagataggtcctttaagtttttaagatttcagataagtcctttaagtttcgagtt 27389878  T
Q  413 tgtttcggata 423  Q
    |||||| ||||    
T  27389879 tgtttcagata 27389889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 335 - 417
Target Start/End: Complemental strand, 41898421 - 41898339
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgttt 417  Q
    |||||||||||| | |||||||||| |||| || ||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  41898421 tcctttaagtttcaagtttgtttcagatagatcatttaagtttctaaggtttcagatatgtcctttaagtttcgagtttgttt 41898339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 337 - 436
Target Start/End: Original strand, 7632838 - 7632938
Alignment:
Q  337 ctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaagtt 435  Q
    |||||||||| | |||| ||||| |||| |||||||||||||||||||||| |||| | |||||||||||  |||||||||||||||||| |||||||||    
T  7632838 ctttaagtttcatgtttatttcagatagatcctttaagtttctaaggtttcagataagtcctttaagtttgaagtttgtttcggataggtcctttaagtt 7632937  T
Q  436 t 436  Q
    |    
T  7632938 t 7632938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 335 - 423
Target Start/End: Complemental strand, 21956457 - 21956369
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    |||||||||||| | |||||||||  |||| |||||||||||| ||||||||| |||| | ||||||||||||||||||||||||||||    
T  21956457 tcctttaagtttcatgtttgtttcggataggtcctttaagtttttaaggtttcagataggtcctttaagtttcgagtttgtttcggata 21956369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 35779089 - 35778981
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||| ||||| ||||||||||||||| | ||||||||   |||| |||||||||||| ||||||||| |||| | | |||||||||||||||||||||    
T  35779089 caaatatctctctggatcctttaagtttcatgtttgttttcgatagatcctttaagtttttaaggtttcagataagtcatttaagtttcgagtttgtttc 35778990  T
Q  419 ggataggtc 427  Q
     ||||||||    
T  35778989 agataggtc 35778981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 361 - 427
Target Start/End: Original strand, 21956124 - 21956190
Alignment:
Q  361 atagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||| |||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||    
T  21956124 ataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcggataggtc 21956190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 335 - 436
Target Start/End: Original strand, 41898133 - 41898234
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaag 433  Q
    |||||||||||| |||||||||||| || | |||||||||||||||||||||| |||| |   ||||||||||||||||||||||||||| | |||||||    
T  41898133 tcctttaagtttcacgtttgtttcagatgggtcctttaagtttctaaggtttcagata-ggtttttaagtttcgagtttgtttcggatagatcctttaag 41898231  T
Q  434 ttt 436  Q
    |||    
T  41898232 ttt 41898234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 335 - 436
Target Start/End: Original strand, 50523074 - 50523176
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaag 433  Q
    |||||||||||| |||||||||| | |||| || |||||||||||| |||||||||||    |||||||||||||||||||||||||||| | |||||||    
T  50523074 tcctttaagtttcacgtttgttttagataggtcatttaagtttctatggtttcggatagattctttaagtttcgagtttgtttcggatagatcctttaag 50523173  T
Q  434 ttt 436  Q
    |||    
T  50523174 ttt 50523176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 314 - 423
Target Start/End: Original strand, 29031258 - 29031367
Alignment:
Q  314 aaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagttt 413  Q
    ||||||||||| |||   || |||||||||||| |||||||||| | |||  || |||||||||||||| |||| |||| | ||||||||||||||||||    
T  29031258 aaggtcaaatatctccatgggtcctttaagtttcacgtttgttttagataagtcttttaagtttctaagatttcagataggtcctttaagtttcgagttt 29031357  T
Q  414 gtttcggata 423  Q
    ||||||||||    
T  29031358 gtttcggata 29031367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 314 - 423
Target Start/End: Original strand, 29043377 - 29043486
Alignment:
Q  314 aaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagttt 413  Q
    ||||||||||| |||   || |||||||||||| |||||||||| | |||  || |||||||||||||| |||| |||| | ||||||||||||||||||    
T  29043377 aaggtcaaatatctccatgggtcctttaagtttcacgtttgttttagataagtcttttaagtttctaagatttcagataggtcctttaagtttcgagttt 29043476  T
Q  414 gtttcggata 423  Q
    ||||||||||    
T  29043477 gtttcggata 29043486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 32557432 - 32557326
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    ||||||||||| ||| |||||||||||| | |||||||||| ||||  | ||||||||| ||||||||  |||| | ||||||||||| |||||||||||    
T  32557432 caaatacctcttcgggtcctttaagtttcatgtttgtttcagatag--catttaagtttataaggttttagataggtcctttaagttttgagtttgtttc 32557335  T
Q  419 ggataggtc 427  Q
    |||||||||    
T  32557334 ggataggtc 32557326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 18598205 - 18598297
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||| ||||| | |||||||||| |||| |||||||||||||||||||||| ||||   | ||||| ||||||||||||||||||||||||    
T  18598205 tcctttgagtttcaagtttgtttcagataggtcctttaagtttctaaggtttcagatagatcatttaaatttcgagtttgtttcggataggtc 18598297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 350 - 430
Target Start/End: Original strand, 41898207 - 41898287
Alignment:
Q  350 gtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtcttt 430  Q
    |||||||||  |||| |||||||||||||||||||||| ||||   ||||||||||||||||||||||| |||||||||||    
T  41898207 gtttgtttcggatagatcctttaagtttctaaggtttcagatagatcctttaagtttcgagtttgtttcagataggtcttt 41898287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 335 - 430
Target Start/End: Complemental strand, 15631674 - 15631579
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtcttt 430  Q
    ||||||||||||   |||||||||  |||| ||||||||||||||||||||||  ||  | ||||||||||||||||||||||| |||||||||||    
T  15631674 tcctttaagtttcgagtttgtttcggataggtcctttaagtttctaaggtttcaaatgggtcctttaagtttcgagtttgtttcagataggtcttt 15631579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 333 - 424
Target Start/End: Complemental strand, 25363590 - 25363499
Alignment:
Q  333 gatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggatag 424  Q
    ||||||||||||||   |||||||||  |||  |||||||||||||||||||||| |||| | ||||||||||||||||||||||| |||||    
T  25363590 gatcctttaagtttcgagtttgtttcgaatatgtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagatag 25363499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 332 - 423
Target Start/End: Complemental strand, 40998521 - 40998430
Alignment:
Q  332 ggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    ||||||||||||||| |||||||||| | |||  | |||||||||| ||||||||| |||| |  |||||||||||||||||||||||||||    
T  40998521 ggatcctttaagtttcacgtttgttttagatatgttctttaagtttataaggtttcagataggttctttaagtttcgagtttgtttcggata 40998430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 436
Target Start/End: Complemental strand, 41898481 - 41898379
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc-tttaag 433  Q
    |||||||| ||| | ||||||||||||||| | |||| ||||||||||||||| |||| | |||||||||||| |||||||||| ||||| || ||||||    
T  41898481 tcctttaaatttcatgtttgtttcatatagattctttcagtttctaaggtttcagataggtcctttaagtttcaagtttgtttcagatagatcatttaag 41898382  T
Q  434 ttt 436  Q
    |||    
T  41898381 ttt 41898379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 314 - 423
Target Start/End: Complemental strand, 46430091 - 46429982
Alignment:
Q  314 aaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagttt 413  Q
    |||| |||||| |||||| |||||||||| ||| |  ||||||| | |||| |||||||||||| ||||||||| ||||   ||||||||||| ||||||    
T  46430091 aaggccaaatatctctccagatcctttaaatttcatatttgttttagatagatcctttaagtttataaggtttcagataaatcctttaagtttggagttt 46429992  T
Q  414 gtttcggata 423  Q
    ||||||||||    
T  46429991 gtttcggata 46429982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 351 - 427
Target Start/End: Original strand, 13870456 - 13870532
Alignment:
Q  351 tttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||  |||| ||||||||||||||||||||||  |||||  |||||||||||||||||||||| ||||||||    
T  13870456 tttgtttcgaataggtcctttaagtttctaaggtttcaaatatgttctttaagtttcgagtttgtttcagataggtc 13870532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 14336699 - 14336791
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||   |||||||||  |||| |||||||||||||||||||||| |||| | | |||||||||||||||| |||| ||||||||    
T  14336699 tcctttaagtttcgagtttgtttcggataggtcctttaagtttctaaggtttcagataggtcatttaagtttcgagtttctttcagataggtc 14336791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 423
Target Start/End: Original strand, 15631337 - 15631425
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    ||||||||||||   |||| ||||| |||| |||||||| ||||||||||||| ||||   ||||||||||||||||||||||||||||    
T  15631337 tcctttaagtttcctgtttatttcagataggtcctttaaatttctaaggtttcagatagatcctttaagtttcgagtttgtttcggata 15631425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 310 - 430
Target Start/End: Original strand, 32751097 - 32751217
Alignment:
Q  310 aaaaaaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcga 409  Q
    |||||||| |||||| ||  || | |||||||| ||| | |||||||| | |||| | |||||||||||||||||||| |||| | | |||||||||  |    
T  32751097 aaaaaaggccaaatatcttcccaggtcctttaaatttcatgtttgtttaagatagattctttaagtttctaaggtttcagataggtcatttaagtttgaa 32751196  T
Q  410 gtttgtttcggataggtcttt 430  Q
    |||||||||||||||||||||    
T  32751197 gtttgtttcggataggtcttt 32751217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 423
Target Start/End: Original strand, 40998182 - 40998269
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    ||||||||||||   |||||||||| |||| ||||||||||| |||||||||| |||| | ||||||||||||||||||||||| ||||    
T  40998182 tcctttaagtttcgagtttgtttcagataggtcctttaagtt-ctaaggtttcagataggtcctttaagtttcgagtttgtttcagata 40998269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 423
Target Start/End: Original strand, 52850872 - 52850976
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||| | ||||||||||||||| ||||||||||   |||  |||||||| |||| |||||||| |||| | ||||||||||||| ||||||||     
T  52850872 caaatacctcactggatcctttaagtttcacgtttgttttggatatgtcctttaaatttcgaaggtttcagataagtcctttaagtttcgggtttgtttt 52850971  T
Q  419 ggata 423  Q
    |||||    
T  52850972 ggata 52850976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 333 - 435
Target Start/End: Original strand, 40998120 - 40998223
Alignment:
Q  333 gatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-cttta 431  Q
    |||||||||| ||| | |||||||| | |||| || |||||||| |||| ||||| |||| | ||||||||||||||||||||||| ||||||| |||||    
T  40998120 gatcctttaaatttcatgtttgttttagatagatcttttaagttactaaagtttcagataggtcctttaagtttcgagtttgtttcagataggtccttta 40998219  T
Q  432 agtt 435  Q
    ||||    
T  40998220 agtt 40998223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 337 - 427
Target Start/End: Complemental strand, 14966455 - 14966365
Alignment:
Q  337 ctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||   |||||||||  |||| |||||||||||||||| ||||||||||   ||||||||||| ||||||||||| ||||||||    
T  14966455 ctttaagtttcgagtttgtttcggataggtcctttaagtttctaaagtttcggatagatcctttaagttttgagtttgtttcagataggtc 14966365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 436
Target Start/End: Complemental strand, 14966517 - 14966415
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaag 433  Q
    |||||||| ||| | |||||||| | |||| || |||||| |||||||||||  |||| |  |||||||||||||||||||||||||||||| |||||||    
T  14966517 tcctttaaattttatgtttgttttagatagatcgtttaaggttctaaggttttagataggttctttaagtttcgagtttgtttcggataggtcctttaag 14966418  T
Q  434 ttt 436  Q
    |||    
T  14966417 ttt 14966415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 436
Target Start/End: Complemental strand, 32751439 - 32751337
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaag 433  Q
    |||||||||||| | |||||||||| |||| || ||||||||||||||||||  ||||   |||||||||||  |||||||||| ||||||| |||||||    
T  32751439 tcctttaagttttatgtttgtttcagataggtcttttaagtttctaaggttttagatagctcctttaagtttaaagtttgtttcagataggtcctttaag 32751340  T
Q  434 ttt 436  Q
    |||    
T  32751339 ttt 32751337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 314 - 430
Target Start/End: Complemental strand, 6112177 - 6112060
Alignment:
Q  314 aaggtcaaatacctctccggatcctttaagtttaacgtttgttt-catatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtt 412  Q
    |||| |||||||||| |||| ||||||||||||   |||||||| || || | ||||||||||||||||| |||  |||| | | ||||||||| |||||    
T  6112177 aaggccaaatacctccccgggtcctttaagtttcgagtttgttttcaaatggatcctttaagtttctaagcttttagataggtcttttaagtttggagtt 6112078  T
Q  413 tgtttcggataggtcttt 430  Q
    ||||| ||||||||||||    
T  6112077 tgttttggataggtcttt 6112060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 427
Target Start/End: Original strand, 20421183 - 20421256
Alignment:
Q  354 gtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||| |||| |||||||||||||||||||||| |||  | ||||||| ||||||||||||||| ||||||||    
T  20421183 gtttcagataggtcctttaagtttctaaggtttcagatgggtcctttaaatttcgagtttgtttcagataggtc 20421256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 335 - 392
Target Start/End: Complemental strand, 32751379 - 32751322
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggata 392  Q
    |||||||||||||| |||||||||| |||| |||||||||||||||||||||| ||||    
T  32751379 tcctttaagtttaaagtttgtttcagataggtcctttaagtttctaaggtttcagata 32751322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 427
Target Start/End: Complemental strand, 35778998 - 35778921
Alignment:
Q  350 gtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||| |||| |||||||| |||| |||||||| |||| | | ||||||||||||||||||||| ||||||||    
T  35778998 gtttgtttcagataggtcctttaaatttccaaggtttcagataggtcatttaagtttcgagtttgtttcagataggtc 35778921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 318 - 427
Target Start/End: Complemental strand, 41511388 - 41511279
Alignment:
Q  318 tcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgttt 417  Q
    ||||||||||  |||  |||||||||||| | |||| ||||| |||| || ||||||||||||| ||||| |||| | ||||||| |||  |||||||||    
T  41511388 tcaaataccttcccgagtcctttaagttttatgtttatttcagatagatcatttaagtttctaaagtttcagataggtcctttaaattttaagtttgttt 41511289  T
Q  418 cggataggtc 427  Q
    ||||||||||    
T  41511288 cggataggtc 41511279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 419
Target Start/End: Original strand, 46429733 - 46429814
Alignment:
Q  338 tttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcg 419  Q
    ||||| ||| || ||||||||| |||| || ||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  46429733 tttaaatttcacttttgtttcagataggtcatttaagtttctaaggttttagatatggcatttaagtttcgagtttgtttcg 46429814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 426
Target Start/End: Original strand, 50523136 - 50523225
Alignment:
Q  337 ctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt 426  Q
    ||||||||||   |||||||||  |||| |||||||||||||||||||||| |||| | ||||||| ||| ||||||||||| |||||||    
T  50523136 ctttaagtttcgagtttgtttcggatagatcctttaagtttctaaggtttcagataagtcctttaaattttgagtttgtttcagataggt 50523225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 53856574 - 53856635
Alignment:
Q  366 tcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||||||||||||||| |||| | ||||||||||||||||||||||  ||||||||    
T  53856574 tcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgttttagataggtc 53856635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 335 - 407
Target Start/End: Original strand, 20421135 - 20421207
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttc 407  Q
    ||||||||||||   |||||||||| |||| |||||||||||||||||||||| |||| | ||||||||||||    
T  20421135 tcctttaagtttcgagtttgtttcagataggtcctttaagtttctaaggtttcagataggtcctttaagtttc 20421207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 23159109 - 23159201
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||   |||||||||  ||||  ||||||||||||||||||||| |||| | | ||||| ||||||||||||||| ||||||||    
T  23159109 tcctttaagttttgagtttgtttcggatagaccctttaagtttctaaggtttcagataggtcttttaactttcgagtttgtttcagataggtc 23159201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 333 - 417
Target Start/End: Complemental strand, 34508951 - 34508867
Alignment:
Q  333 gatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgttt 417  Q
    |||||||||| |||   |||||||||  |||| |||||||||||| ||||||||| |||| | ||||||||||||||||||||||    
T  34508951 gatcctttaaatttcgagtttgtttcgaataggtcctttaagtttttaaggtttcagataagtcctttaagtttcgagtttgttt 34508867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 337 - 424
Target Start/End: Complemental strand, 13864169 - 13864082
Alignment:
Q  337 ctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggatag 424  Q
    |||||||||| | |||| ||||  |||| |||||||||||||||||||||  |||| | |||||||||||| |||||||||| |||||    
T  13864169 ctttaagttttaagtttatttcggataggtcctttaagtttctaaggttttagataggtcctttaagtttcaagtttgtttcagatag 13864082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 430
Target Start/End: Complemental strand, 29031715 - 29031604
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    ||||||||||  ||| |||||||| ||| | |||||||||| |||| |||||||| ||||| ||||||  |||| | ||||| |||||||||||| |||     
T  29031715 caaatacctcctcgggtcctttaactttcatgtttgtttcaaatagatcctttaaatttctgaggttttagataggtccttttagtttcgagtttatttt 29031616  T
Q  419 ggataggtcttt 430  Q
    ||||| ||||||    
T  29031615 ggatatgtcttt 29031604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 430
Target Start/End: Complemental strand, 29043835 - 29043724
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    ||||||||||  ||| |||||||| ||| | |||||||||| |||| |||||||| ||||| ||||||  |||| | ||||| |||||||||||| |||     
T  29043835 caaatacctcctcgggtcctttaactttcatgtttgtttcaaatagatcctttaaatttctgaggttttagataggtccttttagtttcgagtttatttt 29043736  T
Q  419 ggataggtcttt 430  Q
    ||||| ||||||    
T  29043735 ggatatgtcttt 29043724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 310 - 427
Target Start/End: Complemental strand, 3253574 - 3253456
Alignment:
Q  310 aaaaaaggtcaaatacctctccggatccttt-aagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcg 408  Q
    |||||| ||||||||||| ||| | |||||| |||||| | ||||||||||  ||| |||||||| ||||||| ||||| ||||   ||||||| ||| |    
T  3253574 aaaaaatgtcaaatacctttccaggtccttttaagtttcatgtttgtttcagttagatcctttaaatttctaatgtttcagatagatcctttaaatttgg 3253475  T
Q  409 agtttgtttcggataggtc 427  Q
    |||||||||| ||||||||    
T  3253474 agtttgtttcagataggtc 3253456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 361 - 427
Target Start/End: Complemental strand, 13846813 - 13846747
Alignment:
Q  361 atagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||| |||||||||||||||||||||  |||| | |||||||||||| |||||||||| ||||||||    
T  13846813 ataggtcctttaagtttctaaggttttagataggtcctttaagtttcaagtttgtttcagataggtc 13846747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 337 - 427
Target Start/End: Complemental strand, 27390010 - 27389920
Alignment:
Q  337 ctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||| ||| | |||||||||  |||| ||||||||||||||| |||||| |||  | ||||| ||||||||||||||||| ||||||||    
T  27390010 ctttaaatttgaagtttgtttcggataggtcctttaagtttctagggtttcagattggtcctttcagtttcgagtttgtttcagataggtc 27389920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 369 - 427
Target Start/End: Complemental strand, 29031605 - 29031547
Alignment:
Q  369 tttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||||||||| |||| | | ||||||||||||||||||||| ||||||||    
T  29031605 tttaagtttctaaggtttcagataggtcatttaagtttcgagtttgtttccgataggtc 29031547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 369 - 427
Target Start/End: Complemental strand, 29043725 - 29043667
Alignment:
Q  369 tttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||||||||| |||| | | ||||||||||||||||||||| ||||||||    
T  29043725 tttaagtttctaaggtttcagataggtcatttaagtttcgagtttgtttccgataggtc 29043667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 335 - 421
Target Start/End: Original strand, 34979554 - 34979640
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcgga 421  Q
    ||||||||||||   |||||||||  |||  |||||||||||||||||||||| |||| | |||||||||||||| ||| |||||||    
T  34979554 tcctttaagtttcgagtttgtttcgaataagtcctttaagtttctaaggtttcagataggtcctttaagtttcgaatttatttcgga 34979640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 366 - 424
Target Start/End: Original strand, 46429821 - 46429879
Alignment:
Q  366 tcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggatag 424  Q
    |||||||||||||||||||||| |||||| |||||| ||||| |||||||||| |||||    
T  46429821 tcctttaagtttctaaggtttcagatatgtcctttaggtttcaagtttgtttcagatag 46429879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 319 - 417
Target Start/End: Original strand, 53856467 - 53856565
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgttt 417  Q
    |||||||||| || | |||||||||||| | |||||||||  |||  || ||||||||||||||||||| |||||| | |||||||||  |||||||||    
T  53856467 caaatacctccccaggtcctttaagtttcatgtttgtttcggataaatcttttaagtttctaaggtttcagatatgtcttttaagtttgaagtttgttt 53856565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 361 - 427
Target Start/End: Complemental strand, 55358550 - 55358484
Alignment:
Q  361 atagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||| |||||||||||  |||| |||| |||||| ||||||||||||||||||||||| ||||||||    
T  55358550 ataggtcctttaagttgttaagatttcagatatgtcctttaagtttcgagtttgtttcagataggtc 55358484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 407
Target Start/End: Complemental strand, 13870696 - 13870627
Alignment:
Q  338 tttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttc 407  Q
    ||||||||| ||||||||||||| ||| || |||||||||||||||||||  ||| | ||||||||||||    
T  13870696 tttaagttttacgtttgtttcatgtaggtcatttaagtttctaaggtttcatataggtcctttaagtttc 13870627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 411
Target Start/End: Original strand, 14966103 - 14966176
Alignment:
Q  338 tttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagt 411  Q
    ||||||||| |||||||||||| |||| || ||||| |||||||||||||  ||||| | ||||||||||||||    
T  14966103 tttaagtttcacgtttgtttcagataggtcatttaaatttctaaggtttcaaatatgtcttttaagtttcgagt 14966176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 427
Target Start/End: Complemental strand, 18598565 - 18598473
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||   |||||||||  |||| ||||||||||||| |||||||| |||| | ||||||||||| || |||||||| | ||||||    
T  18598565 tcctttaagtttcgagtttgtttcggataggtcctttaagtttcaaaggtttcagataagtcctttaagttttgattttgtttcaggtaggtc 18598473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 427
Target Start/End: Complemental strand, 25154827 - 25154736
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||| |||  |||||||||  |||| ||||| |||||||||||||||| ||||   |||||||||||| |||||||||| ||||||||    
T  25154827 tcctttaagattagagtttgtttcggataggtcctt-aagtttctaaggtttcagatagatcctttaagtttcaagtttgtttcagataggtc 25154736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 222
Target Start/End: Complemental strand, 27668491 - 27668455
Alignment:
Q  186 ttgcaaaatcattaatgattctttcataatcaagatt 222  Q
    |||||||||||||||||||||||||||||||||||||    
T  27668491 ttgcaaaatcattaatgattctttcataatcaagatt 27668455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 334 - 417
Target Start/End: Original strand, 6111865 - 6111948
Alignment:
Q  334 atcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgttt 417  Q
    |||||||||||||   |||||||||  |||| || |||||||||||||| |||| |||| | ||||||||||| ||||||||||    
T  6111865 atcctttaagttttgagtttgtttcggataggtcgtttaagtttctaagatttcagataggtcctttaagttttgagtttgttt 6111948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 369 - 427
Target Start/End: Complemental strand, 6112061 - 6112003
Alignment:
Q  369 tttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||||||||| |||| | | |||||||||||||||||||||  |||||||    
T  6112061 tttaagtttctaaggtttcagataggtcgtttaagtttcgagtttgtttcaaataggtc 6112003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 378
Target Start/End: Original strand, 25154549 - 25154611
Alignment:
Q  316 ggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttc 378  Q
    ||||||||||||  | || |||||||||||| |||||||||||| |||| |||||||||||||    
T  25154549 ggtcaaataccttcctgggtcctttaagtttcacgtttgtttcagataggtcctttaagtttc 25154611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 436
Target Start/End: Original strand, 32557049 - 32557171
Alignment:
Q  315 aggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttg 414  Q
    |||||||||||||  |  |||||||||| ||| |||||||||| | |||| |||||||| ||||||| |||||  ||| | | ||||| |||  ||||||    
T  32557049 aggtcaaataccttcctagatcctttaaatttcacgtttgttttagataggtcctttaaatttctaaagtttcaaataagtcttttaaattttaagtttg 32557148  T
Q  415 tttcggataggt-ctttaagttt 436  Q
    |||||||||| | ||||||||||    
T  32557149 tttcggatagatcctttaagttt 32557171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 332 - 436
Target Start/End: Original strand, 6111812 - 6111908
Alignment:
Q  332 ggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc-ttt 430  Q
    ||||||||||| |||||||||||||| | |||| || ||||||||||||         ||||  ||||||||||| |||||||||||||||||||| |||    
T  6111812 ggatcctttaaatttaacgtttgtttgagataggtcatttaagtttcta---------atatatcctttaagttttgagtttgtttcggataggtcgttt 6111902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 375 - 424
Target Start/End: Original strand, 23159089 - 23159138
Alignment:
Q  375 tttctaaggtttcggatatgccctttaagtttcgagtttgtttcggatag 424  Q
    ||||||||||||| |||| | ||||||||||| |||||||||||||||||    
T  23159089 tttctaaggtttcagataagtcctttaagttttgagtttgtttcggatag 23159138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 427
Target Start/End: Original strand, 32557144 - 32557221
Alignment:
Q  350 gtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||  |||| ||||||||||||||||||||||  ||| | ||||||| |||| ||||||||||  |||||||    
T  32557144 gtttgtttcggatagatcctttaagtttctaaggtttcatataggtcctttaaatttcaagtttgtttcatataggtc 32557221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 338 - 427
Target Start/End: Original strand, 32751185 - 32751273
Alignment:
Q  338 tttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||| | |||||||||  |||| || ||||||| |||||| |||| ||||   ||||||||||||||||||||||| ||||||||    
T  32751185 tttaagtttgaagtttgtttcggataggtcttttaagtctctaag-tttcagatagatcctttaagtttcgagtttgtttcagataggtc 32751273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 423
Target Start/End: Complemental strand, 40289680 - 40289607
Alignment:
Q  350 gtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    |||||||||  |||| |||||||||||||||||| |||  ||| | |||||||||||||||||| |||| ||||    
T  40289680 gtttgtttcggataggtcctttaagtttctaaggattcatataggtcctttaagtttcgagtttatttcagata 40289607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 427
Target Start/End: Complemental strand, 53856757 - 53856680
Alignment:
Q  350 gtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||  |||| |||||||| ||||||||||||| |||| | |||||||||||| | ||||||||  |||||||    
T  53856757 gtttgtttcggataggtcctttaaatttctaaggtttcagataggtcctttaagtttcaactttgtttcaaataggtc 53856680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 383 - 427
Target Start/End: Complemental strand, 7633048 - 7633004
Alignment:
Q  383 gtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||| | ||||||||||||||||||||||| ||||||||    
T  7633048 gtttcggataggtcctttaagtttcgagtttgtttcagataggtc 7633004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 25154599 - 25154691
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||   |||||||||| |||  |||||||||||||||||||||  ||||   | |||| |||||||||||||||  ||||||||    
T  25154599 tcctttaagtttcgagtttgtttcagatatgtcctttaagtttctaaggtttaagatagctcatttaggtttcgagtttgttttagataggtc 25154691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 436
Target Start/End: Original strand, 13870396 - 13870482
Alignment:
Q  350 gtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaagttt 436  Q
    |||||||| | ||||||||||||| ||| ||||||||  |||| | ||||||||||| || ||||||||| |||||| ||||||||||    
T  13870396 gtttgttttagatagttcctttaaatttttaaggtttaagataggtcctttaagttt-gaatttgtttcgaataggtcctttaagttt 13870482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 436
Target Start/End: Complemental strand, 27390057 - 27389970
Alignment:
Q  350 gtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaagttt 436  Q
    |||| ||||| |||| || |||||||||||| |||||| |||| |  |||||| |||  |||||||||||||||||| ||||||||||    
T  27390057 gtttatttcagatagatcttttaagtttctatggtttcagataagttctttaaatttgaagtttgtttcggataggtcctttaagttt 27389970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 427
Target Start/End: Complemental strand, 52851184 - 52851125
Alignment:
Q  368 ctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||| |||||||| |||| | |||||||||||| |||||||||  ||||||||    
T  52851184 ctttaagtttccaaggtttcagataggtcctttaagtttccagtttgttttagataggtc 52851125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 423
Target Start/End: Complemental strand, 13870651 - 13870581
Alignment:
Q  354 gtttcatatagttcctttaagtttctaaggtttcggata-tgccctttaagtttcgagtttgtttcggata 423  Q
    ||||||||||| ||||||||||||||||| |||| ||||   || |||||||||| |||||||||| ||||    
T  13870651 gtttcatataggtcctttaagtttctaagatttcagatagatccttttaagtttcaagtttgtttcagata 13870581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 436
Target Start/End: Complemental strand, 40289707 - 40289653
Alignment:
Q  383 gtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaagttt 436  Q
    |||||||||| | | ||||||||| ||||||||||||||||||| ||||||||||    
T  40289707 gtttcggataggtcatttaagttttgagtttgtttcggataggtcctttaagttt 40289653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 424
Target Start/End: Original strand, 35778724 - 35778765
Alignment:
Q  383 gtttcggatatgccctttaagtttcgagtttgtttcggatag 424  Q
    ||||| |||| | |||||||||||||||||||||||||||||    
T  35778724 gtttcagataggtcctttaagtttcgagtttgtttcggatag 35778765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 430
Target Start/End: Original strand, 40289398 - 40289431
Alignment:
Q  397 ctttaagtttcgagtttgtttcggataggtcttt 430  Q
    |||||||||||||||||||||| |||||||||||    
T  40289398 ctttaagtttcgagtttgtttcagataggtcttt 40289431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 383 - 423
Target Start/End: Original strand, 7632915 - 7632955
Alignment:
Q  383 gtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    |||||||||| | ||||||||||||||||||||||| ||||    
T  7632915 gtttcggataggtcctttaagtttcgagtttgtttcagata 7632955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 436
Target Start/End: Complemental strand, 13846837 - 13846797
Alignment:
Q  397 ctttaagtttcgagtttgtttcggataggt-ctttaagttt 436  Q
    ||||||||||||||||| |||||||||||| ||||||||||    
T  13846837 ctttaagtttcgagtttatttcggataggtcctttaagttt 13846797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 387
Target Start/End: Complemental strand, 26553982 - 26553930
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttc 387  Q
    ||||||||||||   |||||||||  |||| ||||||||||||||||||||||    
T  26553982 tcctttaagtttcgagtttgtttcggataggtcctttaagtttctaaggtttc 26553930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 69; Significance: 8e-31; HSPs: 4)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 310 - 430
Target Start/End: Original strand, 202269 - 202389
Alignment:
Q  310 aaaaaaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcga 409  Q
    |||| |||| ||||||||| |||| |||||||||||| | |||||||||| |||| ||||||||||||||||| |||| |||| | ||||||||||| ||    
T  202269 aaaataggttaaatacctccccgggtcctttaagtttcatgtttgtttcaaatagatcctttaagtttctaagatttcagataggtcctttaagtttgga 202368  T
Q  410 gtttgtttcggataggtcttt 430  Q
    |||||||||||||||||||||    
T  202369 gtttgtttcggataggtcttt 202389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 335 - 427
Target Start/End: Complemental strand, 202583 - 202491
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||   |||||||||  |||| |||||||||||||||||||||| |||| | ||||||||||||||||||||||| ||||||||    
T  202583 tcctttaagtttcgagtttgtttcggatagatcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtc 202491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 335 - 424
Target Start/End: Original strand, 202354 - 202443
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggatag 424  Q
    ||||||||||||   |||||||||  |||| || ||||||||||||||||||| |||| | |||||||||||| |||||||||| |||||    
T  202354 tcctttaagtttggagtttgtttcggataggtcttttaagtttctaaggtttcagataggtcctttaagtttcaagtttgtttcagatag 202443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 369 - 436
Target Start/End: Complemental strand, 202609 - 202541
Alignment:
Q  369 tttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaagttt 436  Q
    ||||| ||||||| ||||| |||| | ||||||||||||||||||||||||||||| | ||||||||||    
T  202609 tttaaatttctaaagtttcagataggtcctttaagtttcgagtttgtttcggatagatcctttaagttt 202541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 1e-29; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 315 - 436
Target Start/End: Complemental strand, 38823846 - 38823724
Alignment:
Q  315 aggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttg 414  Q
    |||||||||||||| |||| |||||||||||| | |||||||||| |||| ||||||||||||| || ||||| |||| | ||||||||||| |||||||    
T  38823846 aggtcaaatacctccccgggtcctttaagttttatgtttgtttcagatagatcctttaagtttccaaagtttcagataggtcctttaagtttagagtttg 38823747  T
Q  415 tttcggataggt-ctttaagttt 436  Q
    |||||||||||| ||||||||||    
T  38823746 tttcggataggtcctttaagttt 38823724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 314 - 419
Target Start/End: Original strand, 5739368 - 5739473
Alignment:
Q  314 aaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagttt 413  Q
    ||||||||||| ||| | ||||||||||||||| |||||||||||| |||  |||||||||||||||||||||| |||| | ||||||||||||||||||    
T  5739368 aaggtcaaatatctccctggatcctttaagtttcacgtttgtttcagatatgtcctttaagtttctaaggtttcagataggtcctttaagtttcgagttt 5739467  T
Q  414 gtttcg 419  Q
    ||||||    
T  5739468 gtttcg 5739473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 337 - 436
Target Start/End: Original strand, 39834007 - 39834107
Alignment:
Q  337 ctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaagtt 435  Q
    |||||||||| |||||||||||| |||| |||||||||||||||||||||| |||| | |||||||||||||||||||||| |||||||| |||||||||    
T  39834007 ctttaagtttcacgtttgtttcagataggtcctttaagtttctaaggtttcagataagtcctttaagtttcgagtttgttttggataggtcctttaagtt 39834106  T
Q  436 t 436  Q
    |    
T  39834107 t 39834107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 314 - 436
Target Start/End: Original strand, 45721123 - 45721246
Alignment:
Q  314 aaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagttt 413  Q
    ||||||||||||||  |||| |||||||||||| | ||||||||||  ||| || ||||||||||||||||||| |||||| ||||||||||||||| ||    
T  45721123 aaggtcaaataccttcccgggtcctttaagtttcatgtttgtttcaggtagatcttttaagtttctaaggtttcagatatgtcctttaagtttcgagctt 45721222  T
Q  414 gtttcggataggtc-tttaagttt 436  Q
    ||||||||||| || |||||||||    
T  45721223 gtttcggatagatcatttaagttt 45721246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 330 - 436
Target Start/End: Original strand, 18030203 - 18030309
Alignment:
Q  330 ccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtctt 429  Q
    ||||||||||||||||| | || | ||||| |||| || ||||||||| ||||||||| |||| | ||||||||||||||||||||||||||||||||||    
T  18030203 ccggatcctttaagtttcatgtctatttcaaatagatcttttaagtttttaaggtttcagataggtcctttaagtttcgagtttgtttcggataggtctt 18030302  T
Q  430 taagttt 436  Q
    |||||||    
T  18030303 taagttt 18030309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 1695782 - 1695874
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||||| | |||||||||| |||| |||||||||||||||||||||| |||| | ||||||||||||||||||||||| ||||||||    
T  1695782 tcctttaagtttgaagtttgtttcaaataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtc 1695874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 333 - 436
Target Start/End: Complemental strand, 20492104 - 20492000
Alignment:
Q  333 gatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-cttta 431  Q
    |||||||||||||| | |||||||||| |||| |||||||||||||||||||||| |||| | | ||||||||||||||||||||| ||||||| |||||    
T  20492104 gatcctttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcatttaagtttcgagtttgtttcagataggtccttta 20492005  T
Q  432 agttt 436  Q
    |||||    
T  20492004 agttt 20492000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 319 - 436
Target Start/End: Complemental strand, 48074515 - 48074398
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||| ||||||||||||||||| | |||||||||| |||| |||||||||||||||| ||||  |||| | |||||||||||||||||||||||    
T  48074515 caaatacctccccggatcctttaagttttatgtttgtttcagataggtcctttaagtttctaa-gtttaagataagtcctttaagtttcgagtttgtttc 48074417  T
Q  419 ggataggt-ctttaagttt 436  Q
     |||| || ||||||||||    
T  48074416 agatatgtcctttaagttt 48074398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 335 - 436
Target Start/End: Complemental strand, 49113264 - 49113162
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaag 433  Q
    |||||||||||| | |||| ||||| |||| |||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||| | |||||||    
T  49113264 tcctttaagtttcatgtttatttcagatagatcctttaagtttctaaggtttcagacatgtcctttaagtttcgagtttgtttcggatagatcctttaag 49113165  T
Q  434 ttt 436  Q
    |||    
T  49113164 ttt 49113162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 320 - 436
Target Start/End: Complemental strand, 1102980 - 1102863
Alignment:
Q  320 aaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcg 419  Q
    ||||||||||||||||||||||||||| |  ||||||| | ||||  ||||||||||||||||||||| |||| | | |||||||||  |||||||||||    
T  1102980 aaatacctctccggatcctttaagtttcatatttgttttagatagaccctttaagtttctaaggtttcagataggtcttttaagtttgaagtttgtttcg 1102881  T
Q  420 gataggt-ctttaagttt 436  Q
    ||||||| ||||||||||    
T  1102880 gataggtcctttaagttt 1102863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 319 - 424
Target Start/End: Complemental strand, 5739596 - 5739491
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||| ||| ||||||| ||||||||| |||||||||||| |||| || ||||||||||||||||||| |||| |  ||||||||||||||||||||||    
T  5739596 caaatatctccccggatcttttaagtttcacgtttgtttcagatagatcttttaagtttctaaggtttcagataggttctttaagtttcgagtttgtttc 5739497  T
Q  419 ggatag 424  Q
     |||||    
T  5739496 agatag 5739491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 332 - 425
Target Start/End: Original strand, 29987215 - 29987308
Alignment:
Q  332 ggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggatagg 425  Q
    ||||||||||||||| |||||||||||| |||| |||||||||||| ||||||||| ||||    |||||||||||||||||||||||||||||    
T  29987215 ggatcctttaagtttcacgtttgtttcagataggtcctttaagtttttaaggtttcagatagattctttaagtttcgagtttgtttcggatagg 29987308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 319 - 436
Target Start/End: Original strand, 1695706 - 1695824
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||| |||| |||||||||||| | |||||||||| |||| |||||||||||||||||||||| |||  | |||||||||||  ||||||||||    
T  1695706 caaatacctccccgggtcctttaagttttatgtttgtttcagatagatcctttaagtttctaaggtttcagattggtcctttaagtttgaagtttgtttc 1695805  T
Q  419 ggataggt-ctttaagttt 436  Q
      |||||| ||||||||||    
T  1695806 aaataggtcctttaagttt 1695824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 319 - 436
Target Start/End: Complemental strand, 4765205 - 4765087
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||| | || |||||||||||| |||||||||||| |||| | |||||||||||||||||||   ||| |  ||||||||||||||||||||||    
T  4765205 caaatacctcccagggtcctttaagtttcacgtttgtttcagataggttctttaagtttctaaggttttaaataggttctttaagtttcgagtttgtttc 4765106  T
Q  419 ggataggt-ctttaagttt 436  Q
    ||||| || ||||||||||    
T  4765105 ggatatgtcctttaagttt 4765087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 333 - 427
Target Start/End: Original strand, 18088082 - 18088176
Alignment:
Q  333 gatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||||   |||||||||| |||| |||||||||||||||||||||| |||| |  |||||||||||||||||||||| ||||||||    
T  18088082 gatcctttaagttttgagtttgtttcagatagatcctttaagtttctaaggtttcagataggtactttaagtttcgagtttgtttcagataggtc 18088176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 316 - 436
Target Start/End: Original strand, 4974820 - 4974941
Alignment:
Q  316 ggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgt 415  Q
    |||||| |||||| |||  |||||||| ||| | |||||||||| |||| |||||||||||||||||||||  |||| | |||||||||||  |||||||    
T  4974820 ggtcaagtacctccccgagtcctttaaattttatgtttgtttcagatagatcctttaagtttctaaggttttagataggtcctttaagtttgaagtttgt 4974919  T
Q  416 ttcggataggt-ctttaagttt 436  Q
    ||||||||||| ||||||||||    
T  4974920 ttcggataggtcctttaagttt 4974941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 350 - 423
Target Start/End: Complemental strand, 15615480 - 15615407
Alignment:
Q  350 gtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    |||||||||| |||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||    
T  15615480 gtttgtttcagataggtcctttaagtttctaaggtttcagatatgtcctttaagtttcgagtttgtttcagata 15615407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 350 - 427
Target Start/End: Complemental strand, 20492027 - 20491950
Alignment:
Q  350 gtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||| |||| |||||||||||||||||||||| |||| | |||||||||||||||||| |||||||||||||    
T  20492027 gtttgtttcagataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttatttcggataggtc 20491950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 338 - 423
Target Start/End: Original strand, 32712182 - 32712267
Alignment:
Q  338 tttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    ||||||||| | |||||||||| |||| ||||||||||||||||| |||| |||| | ||||||||||||||||||||||||||||    
T  32712182 tttaagtttcatgtttgtttcagatagatcctttaagtttctaagatttcagataagtcctttaagtttcgagtttgtttcggata 32712267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 332 - 425
Target Start/End: Complemental strand, 45721565 - 45721472
Alignment:
Q  332 ggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggatagg 425  Q
    ||||||||||||||| |||||||||||| |||  || |||||||||||||||||||  ||| | |||||||||||||||||||||||| |||||    
T  45721565 ggatcctttaagtttcacgtttgtttcagatatgtcttttaagtttctaaggtttcatataggtcctttaagtttcgagtttgtttcgtatagg 45721472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 311 - 436
Target Start/End: Original strand, 41810718 - 41810844
Alignment:
Q  311 aaaaaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgag 410  Q
    ||||||||||||||| || | |  || ||||||||| |||||||||||| |||| |  ||||||||||||||||||| |||| | |||||||||||  ||    
T  41810718 aaaaaggtcaaatacttccctgagtcatttaagtttcacgtttgtttcagataggttatttaagtttctaaggtttcagataggtcctttaagttttaag 41810817  T
Q  411 tttgtttcggataggtc-tttaagttt 436  Q
    ||||||||||||| ||| |||||||||    
T  41810818 tttgtttcggatatgtcatttaagttt 41810844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 335 - 424
Target Start/End: Original strand, 4974899 - 4974988
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggatag 424  Q
    |||||||||||| | |||||||||  |||| |||||||||||||||||||||| |||| | ||||||||||| ||||||||||| |||||    
T  4974899 tcctttaagtttgaagtttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttaagttttgagtttgtttcagatag 4974988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 335 - 427
Target Start/End: Complemental strand, 29987507 - 29987415
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||||  | |||||||||  |||| |||||||||||||||||||||| ||||   ||||||||||||||||||||||| ||||||||    
T  29987507 tcctttaagttggaagtttgtttcgaataggtcctttaagtttctaaggtttcagatagatcctttaagtttcgagtttgtttcagataggtc 29987415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 41810802 - 41810894
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||||| | |||||||||  |||  || ||||||||||||||||||| |||| | ||||||||||||||||||||||| ||||||||    
T  41810802 tcctttaagttttaagtttgtttcggatatgtcatttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtc 41810894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 350 - 430
Target Start/End: Complemental strand, 43142902 - 43142822
Alignment:
Q  350 gtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtcttt 430  Q
    |||||||||| |||| ||||||||||||||||| |||| |||| | ||||| ||||| |||||||||||||||||||||||    
T  43142902 gtttgtttcagataggtcctttaagtttctaagatttcagataggtcctttgagtttagagtttgtttcggataggtcttt 43142822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 335 - 418
Target Start/End: Original strand, 4764900 - 4764983
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    ||||||||||||   |||||||||  |||| |||||||||||||||||||||| |||| | |||||||||||||||||||||||    
T  4764900 tcctttaagtttgtagtttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttc 4764983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 335 - 430
Target Start/End: Original strand, 20491717 - 20491812
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtcttt 430  Q
    |||||||||||| | ||||||||   |||| || ||||||||| ||||||||| |||| | |||||||||||||||||||||||||||| ||||||    
T  20491717 tcctttaagtttcatgtttgttttggatagatcttttaagtttttaaggtttcagataggtcctttaagtttcgagtttgtttcggataagtcttt 20491812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 335 - 436
Target Start/End: Original strand, 29386099 - 29386202
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgcccttt-aagtttcgagtttgtttcggataggtc-tttaa 432  Q
    |||||||| ||| |||||||||||| || | |||||||||||| ||| ||||| |||| | ||||| ||||||||||||||||||||||||||| |||||    
T  29386099 tcctttaaatttcacgtttgtttcaaattggtcctttaagtttataaagtttcagataagtccttttaagtttcgagtttgtttcggataggtcatttaa 29386198  T
Q  433 gttt 436  Q
    ||||    
T  29386199 gttt 29386202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 322 - 436
Target Start/End: Complemental strand, 29987580 - 29987465
Alignment:
Q  322 atacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcgga 421  Q
    ||||||| |||| |||||||||||| | |||||||||| |||  ||||||||||||||||||||||  ||| | ||||||||||   ||||||||||| |    
T  29987580 atacctccccgggtcctttaagttttatgtttgtttcagataaatcctttaagtttctaaggtttcaaataggtcctttaagttggaagtttgtttcgaa 29987481  T
Q  422 taggt-ctttaagttt 436  Q
    ||||| ||||||||||    
T  29987480 taggtcctttaagttt 29987465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 332 - 423
Target Start/End: Complemental strand, 42371812 - 42371721
Alignment:
Q  332 ggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    ||||||||||| ||| | |||||||||| |||| |||||||| |||| |||||||| |||||| ||||||||| ||||||||||||| ||||    
T  42371812 ggatcctttaaatttcatgtttgtttcagatagatcctttaaatttccaaggtttcagatatgtcctttaagtgtcgagtttgtttcagata 42371721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 333 - 427
Target Start/End: Original strand, 4964918 - 4965012
Alignment:
Q  333 gatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||||   |||||||||  |||| |||||||||||||||||||||| |||| | ||||||| |||| |||||||||| ||||||||    
T  4964918 gatcctttaagttttgagtttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttaaatttcaagtttgtttcagataggtc 4965012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 427
Target Start/End: Complemental strand, 3339240 - 3339149
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||||| || ||||||||| |||| || ||||||||||||| |||||  ||| | ||||||||||||||||||||||| ||||||||    
T  3339240 tcctttaagtttcacttttgtttcagatagatc-tttaagtttctaatgtttcaaataggtcctttaagtttcgagtttgtttcagataggtc 3339149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 338 - 436
Target Start/End: Original strand, 18087995 - 18088095
Alignment:
Q  338 tttaagtttaacgtttgtttcatatagttccttt-aagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaagtt 435  Q
    |||||||||||||||||||| | |||| |||||| |||||||||||||||| ||||   ||||||||||| ||||||||||| ||||| | |||||||||    
T  18087995 tttaagtttaacgtttgtttaagataggtccttttaagtttctaaggtttcagatagatcctttaagttttgagtttgtttcagatagatcctttaagtt 18088094  T
Q  436 t 436  Q
    |    
T  18088095 t 18088095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 430
Target Start/End: Complemental strand, 29386374 - 29386294
Alignment:
Q  350 gtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtcttt 430  Q
    |||||||||  |||| || ||||||||||||||||||| |||| | |||||||||||||||||| |||||||||| |||||    
T  29386374 gtttgtttcgaataggtcttttaagtttctaaggtttcagataggtcctttaagtttcgagtttatttcggatagatcttt 29386294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 339 - 430
Target Start/End: Complemental strand, 29386445 - 29386354
Alignment:
Q  339 ttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtcttt 430  Q
    |||||||| | |||||||||| |||| || ||||||||||||| ||||| |||| | | ||||||||| |||||||||||| ||||||||||    
T  29386445 ttaagtttcatgtttgtttcagatagatcatttaagtttctaaagtttcagataggtcttttaagtttggagtttgtttcgaataggtcttt 29386354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 334 - 436
Target Start/End: Complemental strand, 43142978 - 43142875
Alignment:
Q  334 atcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaa 432  Q
    ||||||||| |||||||||||||| | |||| || ||||| ||||||||||||| ||||   | ||||| ||||||||||||||| ||||||| ||||||    
T  43142978 atcctttaaatttaacgtttgttttaaataggtcatttaaatttctaaggtttcagatacatcatttaaatttcgagtttgtttcagataggtcctttaa 43142879  T
Q  433 gttt 436  Q
    ||||    
T  43142878 gttt 43142875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 335 - 430
Target Start/End: Original strand, 45721204 - 45721299
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtcttt 430  Q
    ||||||||||||   | |||||||  |||| || ||||||||||||||||||| |||| | ||||||||||||||||||||||| |||| ||||||    
T  45721204 tcctttaagtttcgagcttgtttcggatagatcatttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataagtcttt 45721299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 350 - 436
Target Start/End: Original strand, 49588031 - 49588118
Alignment:
Q  350 gtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaagttt 436  Q
    |||||||||| |||  |||||||| ||| ||||||||  |||||| | ||||||||||||||||||||||||||||| ||||||||||    
T  49588031 gtttgtttcagataaatcctttaattttttaaggttttagatatgtcttttaagtttcgagtttgtttcggataggtcctttaagttt 49588118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 338 - 427
Target Start/End: Complemental strand, 1102902 - 1102812
Alignment:
Q  338 tttaagtttaacgtttgtttcatatagttcctttaagtttctaagg-tttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||| | |||||||||  |||| |||||||||||||||||| |||| |||| | ||||||||||||||||||||||  ||||||||    
T  1102902 tttaagtttgaagtttgtttcggataggtcctttaagtttctaaggttttcagataggtcctttaagtttcgagtttgttttagataggtc 1102812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 436
Target Start/End: Original strand, 4764820 - 4764942
Alignment:
Q  316 ggtcaaatacctctccggatcctttaagtttaacgtttgttt-catatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttg 414  Q
    ||||||||| ||| |||  |||||||||||| | |||| ||| || |||| ||||||||||||||||| ||||  ||| | |||||||||||  ||||||    
T  4764820 ggtcaaatatctccccgagtcctttaagtttcatgttttttttcagatagatcctttaagtttctaagatttcaaataggtcctttaagtttgtagtttg 4764919  T
Q  415 tttcggataggt-ctttaagttt 436  Q
    |||||||||||| ||||||||||    
T  4764920 tttcggataggtcctttaagttt 4764942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 333 - 419
Target Start/End: Original strand, 47824476 - 47824561
Alignment:
Q  333 gatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcg 419  Q
    |||||||||||||| |||||||||||| | || || ||||||||| ||||||||| |||| | |||||||||||| |||||||||||    
T  47824476 gatcctttaagtttcacgtttgtttcagaaaggtc-tttaagtttttaaggtttcagataggtcctttaagtttcaagtttgtttcg 47824561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 29386175 - 29386248
Alignment:
Q  350 gtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    |||||||||  |||| || ||||||||||||||||||| |||| | ||||||||||||||||||||||| ||||    
T  29386175 gtttgtttcggataggtcatttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagata 29386248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 427
Target Start/End: Original strand, 42371407 - 42371496
Alignment:
Q  338 tttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||| || ||||||||| ||||  ||||||| ||||||| ||||  |||| | |||||||||||||||||||||| |||||||||    
T  42371407 tttaagtttcacatttgtttcagataggacctttaattttctaatgttttagataagtcctttaagtttcgagtttgttttggataggtc 42371496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 369 - 430
Target Start/End: Original strand, 43142662 - 43142723
Alignment:
Q  369 tttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtcttt 430  Q
    ||||||||||||||||||| ||||||   ||||||||||||||||||||||||||| |||||    
T  43142662 tttaagtttctaaggtttcagatatgttttttaagtttcgagtttgtttcggatagatcttt 43142723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 337 - 425
Target Start/End: Original strand, 1102617 - 1102705
Alignment:
Q  337 ctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggatagg 425  Q
    |||||| ||| | |||||||| | |||| |||||||| ||||||||||||| || |||  |||||||||||||||||||||| ||||||    
T  1102617 ctttaaatttcatgtttgttttagataggtcctttaaatttctaaggtttcagacatgttctttaagtttcgagtttgtttcagatagg 1102705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 351 - 427
Target Start/End: Original strand, 15615282 - 15615358
Alignment:
Q  351 tttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||  |||| ||||||||||||||||||||||  |||   ||||||||||||||||||||||| ||||||||    
T  15615282 tttgtttcggataggtcctttaagtttctaaggtttcaaatagatcctttaagtttcgagtttgtttcagataggtc 15615358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 39834065 - 39834157
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||   ||||||||   |||| |||||||||||| ||| ||||| |||||| ||||||||||||||||||||||  ||||||||    
T  39834065 tcctttaagtttcgagtttgttttggataggtcctttaagtttttaaagtttcagatatgtcctttaagtttcgagtttgttttagataggtc 39834157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 335 - 423
Target Start/End: Complemental strand, 48074440 - 48074352
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    ||||||||||||   |||||||||| |||  |||||||||||||||||||||| |||| | | ||||||||| ||||||||||| ||||    
T  48074440 tcctttaagtttcgagtttgtttcagatatgtcctttaagtttctaaggtttcagataggtcatttaagttttgagtttgtttcagata 48074352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 436
Target Start/End: Original strand, 5277299 - 5277410
Alignment:
Q  327 tctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatg-ccctttaagtttcgagtttgtttcggatagg 425  Q
    ||||||| ||||||||||||   |||||||||| |||| || ||||||||||| ||||||| |||| | || ||||||||| | |||||||||||||||     
T  5277299 tctccgggtcctttaagtttcctgtttgtttcagatagatcttttaagtttctgaggtttcagataggtccttttaagttttgtgtttgtttcggataga 5277398  T
Q  426 t-ctttaagttt 436  Q
    | ||||||||||    
T  5277399 tcctttaagttt 5277410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 331 - 414
Target Start/End: Complemental strand, 41811033 - 41810951
Alignment:
Q  331 cggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttg 414  Q
    |||||| ||||||||| | |||||||||| |||| || ||||||||||||||||||| |||| | ||||||| |||||||||||    
T  41811033 cggatcatttaagtttcatgtttgtttcagatagatc-tttaagtttctaaggtttcagataggtcctttaaatttcgagtttg 41810951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 337 - 423
Target Start/End: Original strand, 1102677 - 1102763
Alignment:
Q  337 ctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    ||||||||||   |||||||||| ||||  |||||||||||||||| |||| |||| | |||||||||||||||||| |||| ||||    
T  1102677 ctttaagtttcgagtttgtttcagataggccctttaagtttctaagatttcagataggtcctttaagtttcgagtttatttcagata 1102763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 337 - 427
Target Start/End: Original strand, 29987280 - 29987370
Alignment:
Q  337 ctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||   |||||||||  ||||  |||||||| || ||||||||| |||| | ||||||||||||||||||||||| ||||||||    
T  29987280 ctttaagtttcgagtttgtttcggataggccctttaagcttttaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtc 29987370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 350 - 427
Target Start/End: Complemental strand, 39834280 - 39834202
Alignment:
Q  350 gtttgtttcatatagttcctttaagtttctaaggtttcggatatgcccttt-aagtttcgagtttgtttcggataggtc 427  Q
    |||||||| | |||| || ||||||||||||||||||| |||| | ||||| |||||||||||||||||| ||||||||    
T  39834280 gtttgttttagataggtcatttaagtttctaaggtttcagataggtccttttaagtttcgagtttgtttcagataggtc 39834202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 335 - 424
Target Start/End: Complemental strand, 4965149 - 4965060
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggatag 424  Q
    |||||||||||| | |||||||| | |||| || ||||||||||||||||||| |||| | | ||||| ||| ||||||||||| |||||    
T  4965149 tcctttaagtttcatgtttgttttagatagatcatttaagtttctaaggtttcagataggtcttttaaattttgagtttgtttcagatag 4965060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 43142703 - 43142776
Alignment:
Q  350 gtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    |||||||||  |||| || |||||||||||||||| || |||||| |||||||||||||||||| |||| ||||    
T  43142703 gtttgtttcggatagatcttttaagtttctaaggtgtcagatatgtcctttaagtttcgagtttatttcagata 43142776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 49588091 - 49588164
Alignment:
Q  350 gtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    |||||||||  |||| |||||||||||||||||||||| ||||   |||||||||| | |||||||||||||||    
T  49588091 gtttgtttcggataggtcctttaagtttctaaggtttcagatagatcctttaagttccaagtttgtttcggata 49588164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 18030268 - 18030359
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||   |||||||||  |||| || |||||||||||||||||||  ||| | ||||||||||| |||||||| |||||||||||    
T  18030268 tcctttaagtttcgagtttgtttcggataggtc-tttaagtttctaaggtttcaaataggtcctttaagttttgagtttgtgtcggataggtc 18030359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 320 - 392
Target Start/End: Complemental strand, 41542782 - 41542710
Alignment:
Q  320 aaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggata 392  Q
    ||||||||| ||||||||||||| ||| |||||||||||| |||| || ||||| ||||||| ||||| ||||    
T  41542782 aaatacctccccggatcctttaaatttcacgtttgtttcagataggtcatttaactttctaaagtttcagata 41542710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 372 - 427
Target Start/End: Original strand, 48074119 - 48074174
Alignment:
Q  372 aagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||| ||| ||||| |||| | ||||||||||||||||||||||||||||||||    
T  48074119 aagtttttaaagtttcagataggtcctttaagtttcgagtttgtttcggataggtc 48074174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 423
Target Start/End: Complemental strand, 4765127 - 4765041
Alignment:
Q  337 ctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    ||||||||||   |||||||||  |||  ||||||||||||||||| |||| |||| |  |||||||||||||||||||||| ||||    
T  4765127 ctttaagtttcgagtttgtttcggatatgtcctttaagtttctaagatttcagataggttctttaagtttcgagtttgtttcagata 4765041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 436
Target Start/End: Complemental strand, 18088392 - 18088271
Alignment:
Q  315 aggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttg 414  Q
    ||||||||||||||  | | |||||||||||| | |||||||| | |||  || |||||||||||||| ||||  ||| |  ||| |||||| |||||||    
T  18088392 aggtcaaatacctccactggtcctttaagtttcatgtttgttttagataaatcatttaagtttctaagatttcaaata-ggtcttcaagtttggagtttg 18088294  T
Q  415 tttcggataggt-ctttaagttt 436  Q
    |||||||||||| ||||||||||    
T  18088293 tttcggataggtcctttaagttt 18088271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 335 - 392
Target Start/End: Complemental strand, 38823766 - 38823709
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggata 392  Q
    |||||||||||||  |||||||||  |||| |||||||||||||||||||||| ||||    
T  38823766 tcctttaagtttagagtttgtttcggataggtcctttaagtttctaaggtttcagata 38823709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 423
Target Start/End: Original strand, 41524609 - 41524711
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    ||||||||||| |||||||||||| ||| | |||||||| | |||| |  ||||||||| |||||||||||||| |   ||||| |||  ||||||||||    
T  41524609 caaatacctcttcggatcctttaattttcatgtttgttttagatagat--tttaagtttttaaggtttcggataggtattttaaatttgaagtttgtttc 41524706  T
Q  419 ggata 423  Q
    |||||    
T  41524707 ggata 41524711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 351 - 423
Target Start/End: Complemental strand, 18030616 - 18030544
Alignment:
Q  351 tttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    ||||||||| |||  |||||||| ||||||||||||| |||||    |||||||||||||||||||| |||||    
T  18030616 tttgtttcagataagtcctttaaatttctaaggtttcagatatattatttaagtttcgagtttgttttggata 18030544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 427
Target Start/End: Complemental strand, 49588401 - 49588310
Alignment:
Q  336 cctttaagtttaacgtttgtttcatatagttccttt-aagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||| | |||||||||| |||  |||||| |||||||||||||||| |||| |  ||||| |||| |||||| |||||||||||||    
T  49588401 cctttaagtttcaagtttgtttcagatatgtccttttaagtttctaaggtttcagata-ggtctttatgttttgagtttttttcggataggtc 49588310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 417
Target Start/End: Complemental strand, 18088298 - 18088231
Alignment:
Q  350 gtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgttt 417  Q
    |||||||||  |||| |||||||||||| ||||||||| |||| | ||||||| |||| |||||||||    
T  18088298 gtttgtttcggataggtcctttaagtttttaaggtttcagataggtcctttaaatttcaagtttgttt 18088231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 436
Target Start/End: Original strand, 15615219 - 15615308
Alignment:
Q  351 tttgtttcatatagttccttt-aagtttctaaggttt--cggatatgccctttaagtttcgagtttgtttcggataggt-ctttaagttt 436  Q
    ||||||||| |||| |||||| |||||||||||||||  | | || |  ||||||||||||| |||||||||||||||| ||||||||||    
T  15615219 tttgtttcagatagatccttttaagtttctaaggtttttcaggtaggttctttaagtttcgattttgtttcggataggtcctttaagttt 15615308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 374 - 416
Target Start/End: Complemental strand, 42371710 - 42371668
Alignment:
Q  374 gtttctaaggtttcggatatgccctttaagtttcgagtttgtt 416  Q
    |||||||||||||| |||| | |||||||||||||||||||||    
T  42371710 gtttctaaggtttcagataggtcctttaagtttcgagtttgtt 42371668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 383 - 427
Target Start/End: Complemental strand, 49113185 - 49113141
Alignment:
Q  383 gtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||   ||||||||||||||||||||||| ||||||||    
T  49113185 gtttcggatagatcctttaagtttcgagtttgtttctgataggtc 49113141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 65; Significance: 2e-28; HSPs: 4)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 315 - 427
Target Start/End: Complemental strand, 23511 - 23399
Alignment:
Q  315 aggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttg 414  Q
    |||||||||||||| |||| ||||||||||||   |||||||||| |||| ||||||||||||||||| |||| |||| | ||||||||||| |||||||    
T  23511 aggtcaaatacctccccgggtcctttaagtttcgagtttgtttcaaatagatcctttaagtttctaagatttcagataggtcctttaagtttggagtttg 23412  T
Q  415 tttcggataggtc 427  Q
    |||||||||||||    
T  23411 tttcggataggtc 23399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 319 - 419
Target Start/End: Complemental strand, 22547 - 22447
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||||| || || |||||||||||||||||||||| |||| |||||||| ||||||| ||||| ||||    ||||||||||||||||||||||    
T  22547 caaatacctctctgggtcttttaagtttaacgtttgtttcagataggtcctttaaatttctaaagtttcagatagattctttaagtttcgagtttgtttc 22448  T
Q  419 g 419  Q
    |    
T  22447 g 22447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 436
Target Start/End: Original strand, 22211 - 22313
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaag 433  Q
    |||||||||||| |  ||||||||| |||| |||||||||||||||||  ||| ||||   ||||||||| | ||||||||||||||||||| |||||||    
T  22211 tcctttaagtttcatatttgtttcagatagatcctttaagtttctaagtcttcagatagttcctttaagtatggagtttgtttcggataggtcctttaag 22310  T
Q  434 ttt 436  Q
    |||    
T  22311 ttt 22313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 427
Target Start/End: Complemental strand, 22469 - 22379
Alignment:
Q  337 ctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||   |||||||||  |||  |||||||| ||||||||||||| ||||||   |||||||| |||||||||||| ||||||||    
T  22469 ctttaagtttcgagtttgtttcgaatatgtcctttaaatttctaaggtttcagatatgttttttaagttacgagtttgtttcagataggtc 22379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 2e-28; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 319 - 427
Target Start/End: Original strand, 42091993 - 42092101
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||| | || |||||||||||| |||||||||||| |||| ||||||||||||||||| |||| |||| | |||||||||||||||||||||||    
T  42091993 caaatacctccctgggtcctttaagtttcacgtttgtttcagataggtcctttaagtttctaagatttcagataggtcctttaagtttcgagtttgtttc 42092092  T
Q  419 ggataggtc 427  Q
     ||||||||    
T  42092093 agataggtc 42092101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 335 - 436
Target Start/End: Complemental strand, 6642158 - 6642056
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaag 433  Q
    |||||||||||  |||||||||| | |||| |||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| |||||||    
T  6642158 tcctttaagttccacgtttgttttagataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcggataggtcctttaag 6642059  T
Q  434 ttt 436  Q
    |||    
T  6642058 ttt 6642056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 317 - 430
Target Start/End: Complemental strand, 27319123 - 27319010
Alignment:
Q  317 gtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtt 416  Q
    |||||||||||| | | ||||||||||||| | |||||||||| |||| |||||||| ||||||||||||| |||| | |||||||||||  ||||||||    
T  27319123 gtcaaatacctccctgaatcctttaagttttatgtttgtttcagatagatcctttaaatttctaaggtttcagataagtcctttaagtttgaagtttgtt 27319024  T
Q  417 tcggataggtcttt 430  Q
    ||||||||||||||    
T  27319023 tcggataggtcttt 27319010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 320 - 425
Target Start/End: Original strand, 28571038 - 28571142
Alignment:
Q  320 aaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcg 419  Q
    ||||||||| ||||||||||||||||| |||||||||||| |||| ||||||||||||||||| ||||  ||| |  |||||||||||||||||||||||    
T  28571038 aaatacctccccggatcctttaagtttcacgtttgtttcagataggtcctttaagtttctaagctttcatata-ggtctttaagtttcgagtttgtttcg 28571136  T
Q  420 gatagg 425  Q
    ||||||    
T  28571137 gatagg 28571142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 8942879 - 8942971
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||||| | ||||||||||||||| ||||||||||||||||||||||  ||| | | ||||||||||||||||||||||||||||||    
T  8942879 tcctttaagtttcatgtttgtttcatataggtcctttaagtttctaaggtttcatataggtcttttaagtttcgagtttgtttcggataggtc 8942971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 310 - 436
Target Start/End: Original strand, 39804924 - 39805051
Alignment:
Q  310 aaaaaaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcga 409  Q
    ||||||||  |||||||||  | |||||||||||||| | |||||||||| |||| |||||||||||||||||||||| |||  | |||||||||||  |    
T  39804924 aaaaaaggctaaatacctcctcagatcctttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagatgggtcctttaagtttgaa 39805023  T
Q  410 gtttgtttcggataggt-ctttaagttt 436  Q
    ||||||||||||||||| ||||||||||    
T  39805024 gtttgtttcggataggtcctttaagttt 39805051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 319 - 436
Target Start/End: Complemental strand, 2803223 - 2803105
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||  | ||||||||||||||| |||||||||||| |||  ||||||||||||||||||||||  ||| |  ||||||||||||||||||||||    
T  2803223 caaataccttcctggatcctttaagtttcacgtttgtttcagatatgtcctttaagtttctaaggtttcatataagtgctttaagtttcgagtttgtttc 2803124  T
Q  419 ggataggt-ctttaagttt 436  Q
    ||||| || ||||||||||    
T  2803123 ggatatgtcctttaagttt 2803105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 315 - 436
Target Start/End: Original strand, 20429598 - 20429720
Alignment:
Q  315 aggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttg 414  Q
    |||||||||||||| ||||||| ||||||||| | |||||||| | |||| |||||||||||||||||||| | |||| | ||||||||||| |||||||    
T  20429598 aggtcaaatacctccccggatcttttaagtttcatgtttgtttaaaatagatcctttaagtttctaaggttgcagataggtcctttaagttttgagtttg 20429697  T
Q  415 tttcggataggt-ctttaagttt 436  Q
    ||| ||||| || ||||||||||    
T  20429698 ttttggataagtcctttaagttt 20429720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 320 - 430
Target Start/End: Complemental strand, 42092331 - 42092221
Alignment:
Q  320 aaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcg 419  Q
    ||||||||| ||||| ||||||||||| | |||||||| | |||| |||||||||||||||||||||| |||| | | |||||||||  |||||||||||    
T  42092331 aaatacctccccggagcctttaagtttcatgtttgttttagatagatcctttaagtttctaaggtttcagataggtcttttaagtttgaagtttgtttcg 42092232  T
Q  420 gataggtcttt 430  Q
    |||||||||||    
T  42092231 gataggtcttt 42092221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 319 - 436
Target Start/End: Original strand, 1069049 - 1069164
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||| |||| || ||||| ||| | |||||| ||| |||| ||||||||||||||||||||||||||  | | |||||||||||||||||||||    
T  1069049 caaatacctc-ccgggtcttttaaattttatgtttgtctcagatagatcctttaagtttctaaggtttcggatg-gtcatttaagtttcgagtttgtttc 1069146  T
Q  419 ggataggtctttaagttt 436  Q
    ||||||||||||||||||    
T  1069147 ggataggtctttaagttt 1069164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 316 - 436
Target Start/End: Original strand, 2802870 - 2802991
Alignment:
Q  316 ggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgt 415  Q
    |||||||||| | ||||| | |||||||||| | |||||||||| |||| || ||||||||||||||||||  |||| | ||||||||||| ||||||||    
T  2802870 ggtcaaatacttttccgggttctttaagtttcatgtttgtttcagatagatcttttaagtttctaaggttttagataggtcctttaagtttggagtttgt 2802969  T
Q  416 ttcggataggt-ctttaagttt 436  Q
    ||||||||||| ||||||||||    
T  2802970 ttcggataggtcctttaagttt 2802991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 314 - 427
Target Start/End: Complemental strand, 28574785 - 28574672
Alignment:
Q  314 aaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagttt 413  Q
    |||| |||||||||  |||| |||||||||||| |  ||||||||| |||| || ||||||||||||||||||| |||| | ||||||||||||||||||    
T  28574785 aaggccaaataccttcccgggtcctttaagtttcatatttgtttcagatagatcttttaagtttctaaggtttcagataggtcctttaagtttcgagttt 28574686  T
Q  414 gtttcggataggtc 427  Q
    ||||| ||||||||    
T  28574685 gtttcagataggtc 28574672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 317 - 430
Target Start/End: Original strand, 30003994 - 30004107
Alignment:
Q  317 gtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtt 416  Q
    |||||||||||| | ||||| | ||||||| |||||||||||| |||| |||||||||||| ||||||||  |||||| | |||||||||||||||||||    
T  30003994 gtcaaatacctcactggatcttctaagttttacgtttgtttcagataggtcctttaagtttttaaggttttagatatgtcatttaagtttcgagtttgtt 30004093  T
Q  417 tcggataggtcttt 430  Q
    || |||| ||||||    
T  30004094 tcagatatgtcttt 30004107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 348 - 436
Target Start/End: Original strand, 40807766 - 40807855
Alignment:
Q  348 acgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc-tttaagttt 436  Q
    |||||||||||| |||  |||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||| |||||||||    
T  40807766 acgtttgtttcagataaatcctttaagtttctaaggtttcagataagtcctttaagtttcgagtttgtttcggataggtcgtttaagttt 40807855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 330 - 430
Target Start/End: Complemental strand, 21250696 - 21250596
Alignment:
Q  330 ccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtctt 429  Q
    |||| |||||||||||| | |||||||||| |||| |||||||||||||||||||||  |||| | | |||||||||||||||||||||| |||||||||    
T  21250696 ccgggtcctttaagtttcatgtttgtttcagatagatcctttaagtttctaaggttttagataggtcatttaagtttcgagtttgtttcgaataggtctt 21250597  T
Q  430 t 430  Q
    |    
T  21250596 t 21250596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 310 - 430
Target Start/End: Complemental strand, 26006464 - 26006345
Alignment:
Q  310 aaaaaaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcga 409  Q
    |||| ||||||||||||||| ||| |||||||||||| | |||||||||| |||| |  ||||||||||||||||||  ||||  ||||| |||||||||    
T  26006464 aaaataggtcaaatacctctgcgggtcctttaagtttcatgtttgtttcagatagatt-tttaagtttctaaggttttagatagacccttgaagtttcga 26006366  T
Q  410 gtttgtttcggataggtcttt 430  Q
    ||||||||| |||||||||||    
T  26006365 gtttgtttcagataggtcttt 26006345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 39805009 - 39805101
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||||| | |||||||||  |||| |||||||||||||||||||||| |||| | ||||||||||||||||||||||| ||||||||    
T  39805009 tcctttaagtttgaagtttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtc 39805101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 314 - 436
Target Start/End: Complemental strand, 8943320 - 8943197
Alignment:
Q  314 aaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagttt 413  Q
    |||| |||||||||| |||| |||||| ||||| | |||||||||| |||| |||||||||||||||||||||| |||| |  |||||||||||||||||    
T  8943320 aaggacaaatacctccccgggtccttttagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggttctttaagtttcgagttt 8943221  T
Q  414 gtttcggataggtc-tttaagttt 436  Q
    ||| |  ||||||| |||||||||    
T  8943220 gttccaaataggtcatttaagttt 8943197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 316 - 427
Target Start/End: Original strand, 21250252 - 21250363
Alignment:
Q  316 ggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgt 415  Q
    ||||||||||||| | |  |||||||||||| | |||||||||| |||| ||||| |||||||||||||||| ||||   |||||| |||||||||||||    
T  21250252 ggtcaaatacctccctgtgtcctttaagtttcaggtttgtttcagataggtccttaaagtttctaaggtttcagatagatcctttatgtttcgagtttgt 21250351  T
Q  416 ttcggataggtc 427  Q
    ||||||||||||    
T  21250352 ttcggataggtc 21250363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 335 - 436
Target Start/End: Complemental strand, 2797046 - 2796944
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc-tttaag 433  Q
    |||||||||||| |||||||||||| |||| ||||||||||||||||||||||  ||| |  |||||||||||||||||| |||||||| ||| ||||||    
T  2797046 tcctttaagtttcacgtttgtttcagataggtcctttaagtttctaaggtttcatataagtgctttaagtttcgagtttgcttcggatatgtcatttaag 2796947  T
Q  434 ttt 436  Q
    |||    
T  2796946 ttt 2796944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 341 - 426
Target Start/End: Complemental strand, 1069366 - 1069281
Alignment:
Q  341 aagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt 426  Q
    |||||| ||||||||||| ||||  |||||||||||||||||||||| |||| | ||||||||||||||||||||||| |||||||    
T  1069366 aagttttacgtttgtttcttataagtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggt 1069281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 316 - 436
Target Start/End: Original strand, 2796709 - 2796830
Alignment:
Q  316 ggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgt 415  Q
    |||||||||| |  |||| | |||||||||| | |||||||||| |||| |||||||||||||||||||||  |||| | ||||||||||| ||||||||    
T  2796709 ggtcaaatactttcccgggttctttaagtttcatgtttgtttcagatagatcctttaagtttctaaggttttagataggtcctttaagtttggagtttgt 2796808  T
Q  416 ttcggataggt-ctttaagttt 436  Q
    |||||||| || ||||||||||    
T  2796809 ttcggatatgtcctttaagttt 2796830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 310 - 427
Target Start/End: Complemental strand, 18008576 - 18008459
Alignment:
Q  310 aaaaaaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcga 409  Q
    |||| ||| |||||||||| |||  |||||||||||| | |||||||||| |||| |||||||||||| ||||||||| |||  | ||||||||||||||    
T  18008576 aaaataggccaaatacctccccgagtcctttaagtttcatgtttgtttcagatagatcctttaagtttttaaggtttcagatcggtcctttaagtttcga 18008477  T
Q  410 gtttgtttcggataggtc 427  Q
     |||||||| ||||||||    
T  18008476 atttgtttcagataggtc 18008459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 320 - 436
Target Start/End: Original strand, 27495880 - 27495997
Alignment:
Q  320 aaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcg 419  Q
    ||||||||| |||| |||||||||||| |||||||||||| |||| ||||||||||||||||||||||  ||| | |||||||||||  | |||||||||    
T  27495880 aaatacctccccgggtcctttaagtttcacgtttgtttcagataggtcctttaagtttctaaggtttcaaataggtcctttaagtttgaaatttgtttcg 27495979  T
Q  420 gataggt-ctttaagttt 436  Q
     |||| | ||||||||||    
T  27495980 aatagatcctttaagttt 27495997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 319 - 427
Target Start/End: Original strand, 18008175 - 18008283
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||  | ||||||||||||||| |||||||||||| |||| |||||||| ||||||| ||||| ||   | ||||||||||| |||||||||||    
T  18008175 caaataccttcctggatcctttaagtttcacgtttgtttcagataggtcctttaaatttctaaagtttcagactggtcctttaagttttgagtttgtttc 18008274  T
Q  419 ggataggtc 427  Q
    |||||||||    
T  18008275 ggataggtc 18008283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 335 - 426
Target Start/End: Complemental strand, 27319045 - 27318954
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt 426  Q
    |||||||||||| | |||||||||  |||| || ||||||||||||||||||| |||| | ||||||||||||||||||||||| |||||||    
T  27319045 tcctttaagtttgaagtttgtttcggataggtcttttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggt 27318954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 335 - 424
Target Start/End: Complemental strand, 6642098 - 6642009
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggatag 424  Q
    ||||||||||||   |||||||||  |||| |||||||||||||||||||||| |||| | ||||||||||||||||||||||| |||||    
T  6642098 tcctttaagtttcgagtttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagatag 6642009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 2802949 - 2803041
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||   |||||||||  |||| |||||||||||| ||||||||| |||| | ||||||||||||||||||||||| ||||||||    
T  2802949 tcctttaagtttggagtttgtttcggataggtcctttaagtttttaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtc 2803041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 320 - 427
Target Start/End: Complemental strand, 5361600 - 5361493
Alignment:
Q  320 aaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcg 419  Q
    ||||||||| |||| |||||||||||  | |||||||||| |||| || ||||||||||||||||||| ||||    |||||| |||||||||||||||     
T  5361600 aaatacctccccgggtcctttaagttgcatgtttgtttcagatagatcatttaagtttctaaggtttcagatagattctttaaatttcgagtttgtttca 5361501  T
Q  420 gataggtc 427  Q
    ||||||||    
T  5361500 gataggtc 5361493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 436
Target Start/End: Complemental strand, 1737675 - 1737573
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaag 433  Q
    ||||||||||||   |||| |||| ||||| |||||||||||| ||||||||| |||| | ||||||||||| ||||||||||| ||||||| |||||||    
T  1737675 tcctttaagtttggagtttatttcgtatagatcctttaagtttataaggtttcagataggtcctttaagtttggagtttgtttctgataggtcctttaag 1737576  T
Q  434 ttt 436  Q
    |||    
T  1737575 ttt 1737573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 310 - 424
Target Start/End: Original strand, 6641785 - 6641898
Alignment:
Q  310 aaaaaaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcga 409  Q
    |||| ||| |||||| ||| |||| ||||| |||||| | |||||||||| |||| ||||||||||||||||| |||| |||| | |||||||||||  |    
T  6641785 aaaataggccaaatatctccccgggtcctt-aagtttcatgtttgtttcagatagatcctttaagtttctaagatttcagataggtcctttaagtttgaa 6641883  T
Q  410 gtttgtttcggatag 424  Q
    |||||||||||||||    
T  6641884 gtttgtttcggatag 6641898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 310 - 392
Target Start/End: Original strand, 27318822 - 27318904
Alignment:
Q  310 aaaaaaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggata 392  Q
    ||||||||||||||||||| | || |||||||||| |||||||||||||| |||  |||||||||||| ||||||||| ||||    
T  27318822 aaaaaaggtcaaatacctccctgggtcctttaagtctaacgtttgtttcaaatatgtcctttaagtttataaggtttcagata 27318904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 350 - 427
Target Start/End: Complemental strand, 21250616 - 21250539
Alignment:
Q  350 gtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||  |||| || |||||||||||||| |||| |||| | ||||||||||||||||||||||||||||||||    
T  21250616 gtttgtttcgaataggtcttttaagtttctaagatttcagataggtcctttaagtttcgagtttgtttcggataggtc 21250539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 338 - 427
Target Start/End: Complemental strand, 42092253 - 42092164
Alignment:
Q  338 tttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||| | |||||||||  |||| || ||||||||||||||||||  |||| | ||||||||||||||||||||||| ||||||||    
T  42092253 tttaagtttgaagtttgtttcggataggtcttttaagtttctaaggttttagataggtcctttaagtttcgagtttgtttcagataggtc 42092164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 2796788 - 2796880
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||   |||||||||  |||  |||||||||||| ||||||||| |||| | ||||||||||||||||||||||| ||||||||    
T  2796788 tcctttaagtttggagtttgtttcggatatgtcctttaagtttttaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtc 2796880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 350 - 436
Target Start/End: Complemental strand, 40808029 - 40807942
Alignment:
Q  350 gtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaagttt 436  Q
    |||| ||||| |||| |||||||| ||||||||||||| |||| | |||||||||||  |||||||||||||||||| ||||||||||    
T  40808029 gtttatttcagatagatcctttaactttctaaggtttcagataggtcctttaagtttgaagtttgtttcggataggtcctttaagttt 40807942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 337 - 427
Target Start/End: Complemental strand, 2803145 - 2803055
Alignment:
Q  337 ctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||   |||||||||  |||  |||||||||||| ||||||||| |||| | ||||||||||||||||||||||| ||||||||    
T  2803145 ctttaagtttcgagtttgtttcggatatgtcctttaagtttataaggtttcagataggtcctttaagtttcgagtttgtttcagataggtc 2803055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 436
Target Start/End: Complemental strand, 17849808 - 17849706
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaag 433  Q
    |||||||||||| |  ||| ||||| |||| || ||||||||||||| ||||| |||| | ||||||||||| |||||||||||| |||||| |||||||    
T  17849808 tcctttaagtttcatatttatttcagatagatcgtttaagtttctaaagtttcagataggtcctttaagtttggagtttgtttcgaataggtcctttaag 17849709  T
Q  434 ttt 436  Q
    |||    
T  17849708 ttt 17849706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 319 - 436
Target Start/End: Original strand, 42375417 - 42375535
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    ||||||||||||||| | |||||||||| | |||||||| | |||  |||||||| ||| ||||||||| ||||   || |||||||||| |||||||||    
T  42375417 caaatacctctccgggttctttaagtttcatgtttgtttaagatatatcctttaaatttttaaggtttcagatagatcccttaagtttcgtgtttgtttc 42375516  T
Q  419 ggataggt-ctttaagttt 436  Q
    | |||||| ||||||||||    
T  42375517 gcataggtcctttaagttt 42375535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 333 - 427
Target Start/End: Original strand, 42375491 - 42375585
Alignment:
Q  333 gatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||| ||||||||   |||||||||  |||| |||||||||||||||||| ||| |||| | ||||||| ||||||||||||||| ||||||||    
T  42375491 gatcccttaagtttcgtgtttgtttcgcataggtcctttaagtttctaaggcttcagataggtcctttaaatttcgagtttgtttcagataggtc 42375585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 430
Target Start/End: Complemental strand, 8943237 - 8943144
Alignment:
Q  337 ctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtcttt 430  Q
    ||||||||||   ||||||| || |||| || ||||||||| ||||||||| |||| | |||||||||||||||||||| || |||||||||||    
T  8943237 ctttaagtttcgagtttgttccaaataggtcatttaagtttataaggtttcagataagtcctttaagtttcgagtttgtatcagataggtcttt 8943144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 319 - 424
Target Start/End: Original strand, 35171687 - 35171792
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    ||||||||||||||||| |||||| ||| |||||||||||| |||  |||||||| |||||||| ||||  |||   |||||||||||||  |||||||     
T  35171687 caaatacctctccggattctttaaatttcacgtttgtttcagatatgtcctttaaatttctaagatttcaaataaatcctttaagtttcgtatttgtttt 35171786  T
Q  419 ggatag 424  Q
    ||||||    
T  35171787 ggatag 35171792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 335 - 423
Target Start/End: Complemental strand, 1737615 - 1737527
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    ||||||||||||   |||||||||  |||| |||||||||||||||||||||| |||| |  |||||||||| ||||||||||| ||||    
T  1737615 tcctttaagtttggagtttgtttctgataggtcctttaagtttctaaggtttcagataggtgctttaagttttgagtttgtttcagata 1737527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 6641869 - 6641961
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||||| | |||||||||  ||||  |||||||||||||||| ||||  ||| | |||||||||||||||||| |||| ||||||||    
T  6641869 tcctttaagtttgaagtttgtttcggatagaccctttaagtttctaagatttcacataggtcctttaagtttcgagtttatttcagataggtc 6641961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 335 - 427
Target Start/End: Complemental strand, 39805238 - 39805146
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||   |||||||||  |||| |||||||||||||||||||||  |||| | | |||||||||||||||| |||| ||||||||    
T  39805238 tcctttaagtttcgagtttgtttcggataggtcctttaagtttctaaggttttagataggtcatttaagtttcgagtttctttcagataggtc 39805146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 335 - 423
Target Start/End: Complemental strand, 42375853 - 42375765
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    |||||||||||| |||||||||| | |||| | ||||||| || ||||||||  |||| | ||||||||||| ||||||||||||||||    
T  42375853 tcctttaagtttcacgtttgttttagataggttctttaagcttttaaggttttagataggtcctttaagttttgagtttgtttcggata 42375765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 407
Target Start/End: Complemental strand, 27496229 - 27496139
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttcta--aggtttcggatatgccctttaagtttc 407  Q
    |||||||||| | || |||||||||||| |||||||||||| |||| ||||||||||||| |    |||||||||||| ||||||||||||    
T  27496229 caaatacctccctgggtcctttaagtttcacgtttgtttcagataggtcctttaagtttcgagtttgtttcggatatgtcctttaagtttc 27496139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 436
Target Start/End: Complemental strand, 29440378 - 29440279
Alignment:
Q  338 tttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaagttt 436  Q
    ||||||||| |  ||||||| | |||| |||||||||||| ||||||||| ||||||   ||||||||| |||||||||||||||| || ||||||||||    
T  29440378 tttaagtttcatatttgttttagatagatcctttaagtttttaaggtttcagatatgttttttaagtttggagtttgtttcggataagtcctttaagttt 29440279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 369 - 427
Target Start/End: Complemental strand, 2796952 - 2796894
Alignment:
Q  369 tttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||| ||||||||| |||| | ||||||||||||||||||||||| ||||||||    
T  2796952 tttaagtttataaggtttcagataggtcctttaagtttcgagtttgtttcagataggtc 2796894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 368 - 436
Target Start/End: Original strand, 1069155 - 1069224
Alignment:
Q  368 ctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaagttt 436  Q
    |||||||||| ||||||||| |||| | |||||||||||| |||||||||| ||||||| ||||||||||    
T  1069155 ctttaagtttataaggtttcagataggtcctttaagtttcaagtttgtttcagataggtcctttaagttt 1069224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 333 - 430
Target Start/End: Complemental strand, 38085424 - 38085327
Alignment:
Q  333 gatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtcttt 430  Q
    |||| |||||||||   |||||||||  | || |||||||| ||||||||||||| |||| | || |||||||| |||||||||||||||| ||||||    
T  38085424 gatcatttaagttttgagtttgtttcggagaggtcctttaaatttctaaggtttcagataggtccgttaagttttgagtttgtttcggataagtcttt 38085327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 427
Target Start/End: Complemental strand, 27496182 - 27496090
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||   |||||||||  |||  |||||||||||||||||||||  |||| |  |||||| ||||||||||||||| ||||||||    
T  27496182 tcctttaagtttcgagtttgtttcggatatgtcctttaagtttctaaggtttgagataggttctttaaatttcgagtttgtttcagataggtc 27496090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 436
Target Start/End: Complemental strand, 39805250 - 39805196
Alignment:
Q  383 gtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaagttt 436  Q
    ||||| |||| | ||||||||||||||||||||||||||||||| ||||||||||    
T  39805250 gtttcagataagtcctttaagtttcgagtttgtttcggataggtcctttaagttt 39805196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 369 - 430
Target Start/End: Complemental strand, 13626548 - 13626488
Alignment:
Q  369 tttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtcttt 430  Q
    ||||||||||||||||||  |||||| | |||||||||||||||||||| ||||| ||||||    
T  13626548 tttaagtttctaaggtttgagatatgtc-tttaagtttcgagtttgttttggatatgtcttt 13626488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 366 - 423
Target Start/End: Original strand, 20429709 - 20429766
Alignment:
Q  366 tcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    |||||||||||||||||||||| |||| | | |||||||||||||||| |||| ||||    
T  20429709 tcctttaagtttctaaggtttcagataggtcttttaagtttcgagtttctttcagata 20429766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 27495955 - 27496045
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||||| |  ||||||||  |||| ||||||||||||| ||||||||  | | | ||||||||||||||||||||||  ||||||||    
T  27495955 tcctttaagtttgaaatttgtttcgaatagatcctttaagtttcaaaggtttc--aaaggtcctttaagtttcgagtttgttttagataggtc 27496045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 383 - 427
Target Start/End: Complemental strand, 40807965 - 40807921
Alignment:
Q  383 gtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||| | ||||||||||||||||||||||| ||||||||    
T  40807965 gtttcggataggtcctttaagtttcgagtttgtttcagataggtc 40807921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 414
Target Start/End: Complemental strand, 17849748 - 17849669
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttg 414  Q
    ||||||||||||   |||||||||  |||| ||||||||||||||||||| ||  |||   |||||||||||||||||||    
T  17849748 tcctttaagtttggagtttgtttcgaataggtcctttaagtttctaaggtctcaaatagatcctttaagtttcgagtttg 17849669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 436
Target Start/End: Complemental strand, 27496194 - 27496140
Alignment:
Q  383 gtttcggatatgccctttaagtttcgagtttgtttcggataggt-ctttaagttt 436  Q
    ||||| |||| | |||||||||||||||||||||||||||| || ||||||||||    
T  27496194 gtttcagataggtcctttaagtttcgagtttgtttcggatatgtcctttaagttt 27496140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 427
Target Start/End: Original strand, 29440123 - 29440213
Alignment:
Q  337 ctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||| | |||||||| | |||  ||||||||||||  || ||||| |||| | |||||||||||| | |||||||| ||||||||    
T  29440123 ctttaagtttcatgtttgttttagatatgtcctttaagttttcaaagtttcagataagtcctttaagtttcaaatttgtttcagataggtc 29440213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 424
Target Start/End: Original strand, 30004087 - 30004161
Alignment:
Q  350 gtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggatag 424  Q
    |||||||||| |||  || ||||||||||||||||||| |||| | ||||||| |||||| ||| |||| |||||    
T  30004087 gtttgtttcagatatgtcttttaagtttctaaggtttcagataggtcctttaaatttcgaatttatttcagatag 30004161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 436
Target Start/End: Complemental strand, 1737750 - 1737633
Alignment:
Q  320 aaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcg 419  Q
    ||||||||  |||| | |||||||||| | |||||| | | |||| || ||| ||||| ||||||||| |||| | ||||||||||| |||||| |||||    
T  1737750 aaatacctgcccgggttctttaagtttcatgtttgtcttagatagatcatttcagtttttaaggtttcagataagtcctttaagtttggagtttatttcg 1737651  T
Q  420 gataggt-ctttaagttt 436  Q
     |||| | ||||||||||    
T  1737650 tatagatcctttaagttt 1737633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 215
Target Start/End: Complemental strand, 4552890 - 4552861
Alignment:
Q  186 ttgcaaaatcattaatgattctttcataat 215  Q
    ||||||||||||||||||||||||||||||    
T  4552890 ttgcaaaatcattaatgattctttcataat 4552861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 383 - 427
Target Start/End: Complemental strand, 29440302 - 29440258
Alignment:
Q  383 gtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||||| | |||||||||||||||||||||||  |||||||    
T  29440302 gtttcggataagtcctttaagtttcgagtttgtttcatataggtc 29440258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 61; Significance: 5e-26; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 319 - 423
Target Start/End: Original strand, 11714 - 11818
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||| | ||||||||||||||| | |||||||||| |||| ||||||||||||| |||||||| |||| | ||||||||||| |||||||||||    
T  11714 caaatacctcactggatcctttaagtttcatgtttgtttcagatagatcctttaagtttcgaaggtttcagataggtcctttaagtttggagtttgtttc 11813  T
Q  419 ggata 423  Q
    |||||    
T  11814 ggata 11818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 423
Target Start/End: Original strand, 11790 - 11878
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    ||||||||||||   |||||||||  |||  |||||||| ||||| || ||||  ||||| ||||||||||||||||||||||| ||||    
T  11790 tcctttaagtttggagtttgtttcggataagtcctttaaatttcttagatttcatatatgtcctttaagtttcgagtttgtttcagata 11878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 61; Significance: 5e-26; HSPs: 4)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 319 - 419
Target Start/End: Original strand, 60472 - 60572
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||| | || |||||||||||| |||||||||||| |||| | |||||||||||||||||||| |||| | |||||||||||||||||||||||    
T  60472 caaatacctccctgggtcctttaagtttcacgtttgtttcagataggtactttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttc 60571  T
Q  419 g 419  Q
    |    
T  60572 g 60572  T

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Target: scaffold0051; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 335 - 418
Target Start/End: Complemental strand, 60812 - 60729
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    |||||||||||| |  ||||||||| |||| || |||||||||||||||||||||||| | |||||| |||| |||||||||||    
T  60812 tcctttaagttttatatttgtttcagatagatcatttaagtttctaaggtttcggataggtcctttatgtttggagtttgtttc 60729  T

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Target: scaffold0051; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 407
Target Start/End: Complemental strand, 60737 - 60680
Alignment:
Q  350 gtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttc 407  Q
    |||||||||| |||  ||||||||||||||||||| ||||||||| ||||||||||||    
T  60737 gtttgtttcaaataagtcctttaagtttctaaggtctcggatatgtcctttaagtttc 60680  T

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Target: scaffold0051; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 60548 - 60640
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    ||||||||||||   |||||||||  |||  ||||||||| |||||||||||| |||| | |||||| ||||| |||||||||  ||||||||    
T  60548 tcctttaagtttcgagtttgtttcgaatatgtcctttaagattctaaggtttcagataggtcctttatgtttcaagtttgttttagataggtc 60640  T

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Target: scaffold0220 (Bit Score: 59; Significance: 8e-25; HSPs: 3)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 319 - 425
Target Start/End: Original strand, 21813 - 21919
Alignment:
Q  319 caaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttc 418  Q
    ||||||||||||  | |||||||||||| |||||||||||  |||| ||||||||||||||| |||||| |||| | | |||||||||||||||||||||    
T  21813 caaatacctctctaggtcctttaagtttcacgtttgtttcggataggtcctttaagtttctacggtttcagataggtcatttaagtttcgagtttgtttc 21912  T
Q  419 ggatagg 425  Q
    |||||||    
T  21913 ggatagg 21919  T

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Target: scaffold0220; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 314 - 436
Target Start/End: Complemental strand, 22159 - 22036
Alignment:
Q  314 aaggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagttt 413  Q
    |||| |||||||||| |||| |||||||||||| | |||| | | | || |  ||||||||||||||| ||||| |||| | | ||||||||||||||||    
T  22159 aaggccaaatacctccccgggtcctttaagtttcatgtttatcttagattgaccctttaagtttctaaagtttcagataggtcatttaagtttcgagttt 22060  T
Q  414 gtttcggataggt-ctttaagttt 436  Q
    |||||| |||||| ||||||||||    
T  22059 gtttcgtataggtcctttaagttt 22036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 350 - 424
Target Start/End: Complemental strand, 22063 - 21989
Alignment:
Q  350 gtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggatag 424  Q
    ||||||||| ||||| |||||||||||||||||||||| ||||   ||||||| ||||||||||||||| |||||    
T  22063 gtttgtttcgtataggtcctttaagtttctaaggtttcagatagatcctttaaatttcgagtttgtttcagatag 21989  T

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Target: scaffold0121 (Bit Score: 52; Significance: 1e-20; HSPs: 3)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 436
Target Start/End: Complemental strand, 24014 - 23915
Alignment:
Q  338 tttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggatagg-tctttaagttt 436  Q
    ||||||||| |||||||||||| |||| |||||||| ||||||||||||| ||||   ||||| |||||| ||||||||||||||||| |||||||||||    
T  24014 tttaagtttcacgtttgtttcagatagatcctttaaatttctaaggtttcagatagatcctttcagtttcaagtttgtttcggataggttctttaagttt 23915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 315 - 427
Target Start/End: Original strand, 23648 - 23760
Alignment:
Q  315 aggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttg 414  Q
    ||||||||||||||  | |||||||||||||| | |||||||| | |||| || ||||||||| ||||||||| |||| | | ||||| |||  ||||||    
T  23648 aggtcaaatacctcatcagatcctttaagtttcatgtttgttttagatagatcatttaagtttttaaggtttcagataagtcatttaaatttaaagtttg 23747  T
Q  415 tttcggataggtc 427  Q
    |||||||||||||    
T  23748 tttcggataggtc 23760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 333 - 427
Target Start/End: Complemental strand, 23959 - 23865
Alignment:
Q  333 gatcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtc 427  Q
    |||||||| ||||| | |||||||||  |||| | |||||||||| ||||||||| |||| | ||||||||||||||||||| ||| ||||||||    
T  23959 gatcctttcagtttcaagtttgtttcggataggttctttaagtttttaaggtttcagataggtcctttaagtttcgagtttgcttcagataggtc 23865  T

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Target: scaffold0179 (Bit Score: 49; Significance: 7e-19; HSPs: 3)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 335 - 423
Target Start/End: Original strand, 32252 - 32340
Alignment:
Q  335 tcctttaagtttaacgtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggata 423  Q
    ||||||||||||   |||| ||||| |||| |||||||||||||||||||||| |||| | ||||||||||||||||||||||| ||||    
T  32252 tcctttaagtttcgagtttctttcagataggtcctttaagtttctaaggtttcagataagtcctttaagtttcgagtttgtttcagata 32340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 350 - 436
Target Start/End: Complemental strand, 32495 - 32410
Alignment:
Q  350 gtttgtttcatatagttcctttaagtttctaaggtttcggatatgccctttaagtttcgagtttgtttcggataggtctttaagttt 436  Q
    |||||||||| |||| || ||||||||||||||||||| |||||| | |||||||||  |||||||||| |||||||||||||||||    
T  32495 gtttgtttcagatagatc-tttaagtttctaaggtttcagatatgtcatttaagtttgaagtttgtttcagataggtctttaagttt 32410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 315 - 378
Target Start/End: Original strand, 32201 - 32264
Alignment:
Q  315 aggtcaaatacctctccggatcctttaagtttaacgtttgtttcatatagttcctttaagtttc 378  Q
    |||||||||||||| | || |||||||||||||||||||||| || |||  |||||||||||||    
T  32201 aggtcaaatacctccctgggtcctttaagtttaacgtttgttacagataagtcctttaagtttc 32264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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