View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12781_low_26 (Length: 274)

Name: NF12781_low_26
Description: NF12781
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12781_low_26
NF12781_low_26
[»] chr2 (61 HSPs)
chr2 (30-159)||(33912637-33912766)
chr2 (158-274)||(11163337-11163453)
chr2 (159-274)||(15848087-15848202)
chr2 (158-274)||(6657876-6657992)
chr2 (159-274)||(45556111-45556226)
chr2 (160-274)||(16099055-16099169)
chr2 (158-274)||(44714075-44714190)
chr2 (158-274)||(36382159-36382275)
chr2 (167-274)||(39498317-39498424)
chr2 (163-274)||(37895661-37895772)
chr2 (158-229)||(44045361-44045432)
chr2 (161-274)||(2318160-2318272)
chr2 (159-229)||(16099383-16099453)
chr2 (159-229)||(36755447-36755517)
chr2 (160-229)||(6658206-6658275)
chr2 (160-271)||(22051310-22051421)
chr2 (162-272)||(36479719-36479830)
chr2 (179-274)||(14900766-14900859)
chr2 (160-274)||(39423515-39423629)
chr2 (158-229)||(39498638-39498709)
chr2 (179-272)||(15604358-15604451)
chr2 (160-274)||(25230102-25230216)
chr2 (157-274)||(25231162-25231279)
chr2 (159-229)||(37895346-37895416)
chr2 (163-272)||(6588686-6588795)
chr2 (162-274)||(10712725-10712837)
chr2 (159-228)||(36382487-36382556)
chr2 (156-229)||(39423874-39423947)
chr2 (154-227)||(45556408-45556481)
chr2 (179-270)||(28226060-28226151)
chr2 (30-74)||(33912430-33912474)
chr2 (159-274)||(44044113-44044228)
chr2 (154-272)||(3555244-3555362)
chr2 (179-272)||(15604653-15604746)
chr2 (160-229)||(11163054-11163123)
chr2 (159-252)||(34447812-34447904)
chr2 (160-272)||(10713039-10713151)
chr2 (160-272)||(30729621-30729733)
chr2 (162-229)||(36480077-36480144)
chr2 (179-272)||(8710782-8710875)
chr2 (171-229)||(13692579-13692637)
chr2 (158-272)||(15848404-15848518)
chr2 (154-229)||(6307077-6307151)
chr2 (180-274)||(33739723-33739817)
chr2 (158-229)||(34448154-34448225)
chr2 (159-209)||(2318889-2318939)
chr2 (160-229)||(3556368-3556437)
chr2 (160-209)||(9076446-9076495)
chr2 (155-274)||(6573538-6573657)
chr2 (155-274)||(41248842-41248961)
chr2 (180-274)||(13995956-13996050)
chr2 (158-237)||(28228668-28228747)
chr2 (180-274)||(33062333-33062427)
chr2 (161-271)||(36755094-36755204)
chr2 (198-271)||(11830402-11830475)
chr2 (180-272)||(1695760-1695852)
chr2 (198-274)||(6573085-6573160)
chr2 (198-274)||(25892432-25892508)
chr2 (164-229)||(44713799-44713864)
chr2 (180-232)||(13995693-13995745)
chr2 (180-232)||(33062070-33062122)
[»] chr6 (53 HSPs)
chr6 (158-274)||(30337447-30337563)
chr6 (159-274)||(21628027-21628142)
chr6 (163-274)||(33517537-33517648)
chr6 (155-274)||(12080631-12080750)
chr6 (158-274)||(26463177-26463293)
chr6 (160-274)||(30725760-30725873)
chr6 (150-229)||(30726118-30726197)
chr6 (160-229)||(30337777-30337846)
chr6 (157-229)||(681087-681159)
chr6 (149-229)||(17734185-17734265)
chr6 (158-229)||(33647310-33647381)
chr6 (157-274)||(3059254-3059371)
chr6 (159-229)||(3059615-3059685)
chr6 (161-274)||(17734477-17734590)
chr6 (157-274)||(30803858-30803975)
chr6 (159-229)||(33517893-33517963)
chr6 (157-226)||(13379844-13379913)
chr6 (159-274)||(8089442-8089557)
chr6 (159-229)||(679865-679935)
chr6 (158-229)||(12080995-12081066)
chr6 (158-229)||(20651008-20651079)
chr6 (179-272)||(31407192-31407285)
chr6 (158-274)||(8090241-8090357)
chr6 (179-274)||(14196898-14196993)
chr6 (158-226)||(30804223-30804291)
chr6 (158-272)||(21836344-21836458)
chr6 (157-271)||(32593487-32593601)
chr6 (179-272)||(7160823-7160916)
chr6 (179-272)||(22502793-22502886)
chr6 (162-227)||(11434804-11434869)
chr6 (160-229)||(15115339-15115408)
chr6 (160-229)||(15116591-15116660)
chr6 (167-271)||(33646970-33647074)
chr6 (157-229)||(12408530-12408602)
chr6 (179-274)||(25486209-25486304)
chr6 (214-272)||(21836085-21836143)
chr6 (180-274)||(28000668-28000762)
chr6 (179-272)||(6517522-6517614)
chr6 (158-271)||(7161119-7161232)
chr6 (159-229)||(11393163-11393233)
chr6 (179-272)||(14196634-14196727)
chr6 (179-271)||(7905262-7905354)
chr6 (160-229)||(12407508-12407577)
chr6 (179-271)||(22503089-22503181)
chr6 (160-232)||(26464555-26464627)
chr6 (180-274)||(363113-363207)
chr6 (159-274)||(20651961-20652076)
chr6 (163-210)||(22617886-22617933)
chr6 (198-272)||(25485991-25486065)
chr6 (157-232)||(28498381-28498456)
chr6 (159-229)||(21627712-21627782)
chr6 (179-271)||(7905558-7905650)
chr6 (180-232)||(22373013-22373065)
[»] chr4 (109 HSPs)
chr4 (159-274)||(24711110-24711225)
chr4 (158-274)||(7451832-7451948)
chr4 (158-274)||(34765694-34765810)
chr4 (158-274)||(44967352-44967468)
chr4 (158-274)||(50418951-50419067)
chr4 (162-271)||(37248238-37248347)
chr4 (158-274)||(13058035-13058151)
chr4 (159-271)||(18831348-18831460)
chr4 (159-274)||(23613308-23613423)
chr4 (159-274)||(5368946-5369061)
chr4 (158-274)||(36009127-36009244)
chr4 (155-274)||(43155810-43155929)
chr4 (157-274)||(55867428-55867545)
chr4 (159-274)||(14801735-14801850)
chr4 (158-274)||(24349672-24349788)
chr4 (157-229)||(50418665-50418737)
chr4 (161-272)||(52909254-52909365)
chr4 (168-274)||(49879490-49879596)
chr4 (163-229)||(37248564-37248630)
chr4 (155-229)||(49879202-49879276)
chr4 (157-274)||(51692550-51692667)
chr4 (157-274)||(10781798-10781915)
chr4 (157-229)||(51692878-51692950)
chr4 (156-274)||(24411354-24411472)
chr4 (159-229)||(13058341-13058411)
chr4 (162-271)||(15507990-15508098)
chr4 (159-229)||(24350791-24350861)
chr4 (158-271)||(37976470-37976583)
chr4 (162-271)||(54087012-54087121)
chr4 (160-229)||(7452162-7452231)
chr4 (162-274)||(17356236-17356348)
chr4 (160-229)||(23613637-23613706)
chr4 (179-274)||(27934551-27934646)
chr4 (160-227)||(18831678-18831745)
chr4 (158-229)||(24711439-24711510)
chr4 (162-229)||(44967071-44967138)
chr4 (179-272)||(10408203-10408296)
chr4 (159-229)||(10780712-10780782)
chr4 (159-229)||(10974321-10974391)
chr4 (163-229)||(43155532-43155598)
chr4 (159-271)||(11448046-11448158)
chr4 (159-271)||(35028315-35028427)
chr4 (158-227)||(36008842-36008911)
chr4 (154-274)||(53129820-53129940)
chr4 (162-274)||(53701814-53701926)
chr4 (179-274)||(9400802-9400897)
chr4 (162-229)||(16006152-16006219)
chr4 (158-229)||(24411707-24411778)
chr4 (198-272)||(27068948-27069022)
chr4 (158-229)||(35027996-35028067)
chr4 (159-229)||(1179159-1179229)
chr4 (165-274)||(16005843-16005952)
chr4 (158-272)||(39539234-39539348)
chr4 (159-217)||(46661285-46661343)
chr4 (159-209)||(48528484-48528534)
chr4 (163-229)||(54086698-54086764)
chr4 (179-272)||(54858579-54858672)
chr4 (160-229)||(147319-147388)
chr4 (179-271)||(3032601-3032693)
chr4 (154-274)||(16605596-16605716)
chr4 (179-271)||(27069225-27069317)
chr4 (156-229)||(34765376-34765449)
chr4 (158-270)||(35508558-35508670)
chr4 (179-271)||(45463092-45463184)
chr4 (161-229)||(15507674-15507742)
chr4 (158-229)||(148114-148185)
chr4 (179-272)||(10407908-10408001)
chr4 (159-237)||(40387466-40387544)
chr4 (179-272)||(54858874-54858967)
chr4 (160-229)||(5369226-5369295)
chr4 (183-271)||(50750910-50750998)
chr4 (159-227)||(17355924-17355992)
chr4 (179-274)||(33247556-33247651)
chr4 (198-272)||(22717977-22718051)
chr4 (198-272)||(22987165-22987239)
chr4 (202-272)||(27149310-27149380)
chr4 (198-272)||(27891622-27891696)
chr4 (180-274)||(42738314-42738408)
chr4 (179-272)||(9400538-9400631)
chr4 (163-229)||(11108199-11108265)
chr4 (198-271)||(39667091-39667164)
chr4 (159-237)||(40388457-40388535)
chr4 (155-229)||(52909612-52909686)
chr4 (179-271)||(11523968-11524060)
chr4 (157-274)||(41582444-41582561)
chr4 (179-267)||(45463392-45463480)
chr4 (158-274)||(54435411-54435527)
chr4 (179-274)||(22566818-22566913)
chr4 (163-227)||(37976156-37976220)
chr4 (157-272)||(50504139-50504254)
chr4 (198-268)||(5818093-5818163)
chr4 (198-272)||(52573266-52573340)
chr4 (159-209)||(1178056-1178106)
chr4 (160-226)||(14802097-14802163)
chr4 (178-263)||(33247292-33247377)
chr4 (156-274)||(41583545-41583663)
chr4 (179-272)||(52573542-52573635)
chr4 (146-192)||(54713602-54713648)
chr4 (180-272)||(9144786-9144878)
chr4 (179-271)||(39701224-39701316)
chr4 (158-274)||(50751812-50751927)
chr4 (160-209)||(55866111-55866160)
chr4 (179-274)||(4983009-4983104)
chr4 (180-232)||(32950467-32950519)
chr4 (180-232)||(34837094-34837146)
chr4 (180-232)||(38012190-38012242)
chr4 (180-232)||(38012495-38012547)
chr4 (76-143)||(38377888-38377956)
chr4 (180-232)||(51203629-51203681)
[»] chr3 (78 HSPs)
chr3 (157-274)||(2796176-2796293)
chr3 (160-274)||(9294272-9294386)
chr3 (159-271)||(19741209-19741321)
chr3 (158-274)||(23458293-23458409)
chr3 (157-274)||(42342788-42342905)
chr3 (161-274)||(51994200-51994313)
chr3 (158-274)||(33689693-33689809)
chr3 (157-274)||(40033770-40033887)
chr3 (160-274)||(40758147-40758258)
chr3 (163-274)||(46474818-46474929)
chr3 (160-231)||(34142575-34142646)
chr3 (160-274)||(55052562-55052675)
chr3 (157-229)||(51993961-51994033)
chr3 (158-229)||(19740921-19740992)
chr3 (148-229)||(36418047-36418128)
chr3 (159-271)||(43384282-43384394)
chr3 (156-274)||(9367737-9367855)
chr3 (179-272)||(29118852-29118945)
chr3 (179-272)||(35643870-35643963)
chr3 (159-229)||(53856416-53856486)
chr3 (160-229)||(3850486-3850555)
chr3 (158-271)||(41558006-41558119)
chr3 (179-274)||(36314581-36314676)
chr3 (179-274)||(48322660-48322755)
chr3 (158-237)||(1079572-1079651)
chr3 (198-272)||(10307689-10307763)
chr3 (159-274)||(25107212-25107327)
chr3 (158-229)||(40758469-40758540)
chr3 (179-272)||(3469514-3469607)
chr3 (169-270)||(29685950-29686051)
chr3 (159-209)||(33689381-33689431)
chr3 (179-268)||(37778591-37778680)
chr3 (179-272)||(40788734-40788827)
chr3 (163-272)||(53756747-53756856)
chr3 (183-271)||(4323519-4323607)
chr3 (166-270)||(9368619-9368723)
chr3 (179-271)||(32306739-32306831)
chr3 (160-209)||(53856015-53856064)
chr3 (149-209)||(9292232-9292292)
chr3 (161-237)||(23276334-23276410)
chr3 (169-229)||(23457988-23458048)
chr3 (161-229)||(35712045-35712113)
chr3 (198-272)||(3469238-3469312)
chr3 (180-274)||(8041636-8041730)
chr3 (198-272)||(11910737-11910811)
chr3 (198-272)||(13948818-13948892)
chr3 (198-268)||(47551531-47551601)
chr3 (198-268)||(52032457-52032527)
chr3 (161-272)||(53757039-53757150)
chr3 (179-272)||(10770509-10770602)
chr3 (163-209)||(36150530-36150576)
chr3 (179-272)||(36314317-36314410)
chr3 (163-229)||(36417691-36417757)
chr3 (163-271)||(40506104-40506213)
chr3 (179-272)||(52032157-52032250)
chr3 (163-229)||(55052295-55052361)
chr3 (198-270)||(10294875-10294947)
chr3 (198-274)||(10770774-10770850)
chr3 (159-226)||(2796459-2796526)
chr3 (161-232)||(25108451-25108522)
chr3 (198-272)||(33506264-33506338)
chr3 (198-272)||(48322415-48322489)
chr3 (159-229)||(3849030-3849100)
chr3 (179-272)||(10294586-10294679)
chr3 (157-274)||(21186009-21186126)
chr3 (163-229)||(26463635-26463701)
chr3 (159-209)||(26463965-26464015)
chr3 (179-272)||(32306443-32306536)
chr3 (160-230)||(33154877-33154947)
chr3 (198-271)||(40788458-40788531)
chr3 (198-271)||(43998183-43998256)
chr3 (158-227)||(1078535-1078604)
chr3 (214-270)||(3596163-3596219)
chr3 (158-274)||(4322590-4322705)
chr3 (164-229)||(41558241-41558306)
chr3 (163-208)||(46475160-46475205)
chr3 (179-274)||(33156308-33156403)
chr3 (163-227)||(42343092-42343156)
[»] chr8 (77 HSPs)
chr8 (158-274)||(23663828-23663944)
chr8 (158-274)||(23698558-23698674)
chr8 (159-272)||(8316904-8317017)
chr8 (160-274)||(39071676-39071790)
chr8 (158-274)||(12273167-12273283)
chr8 (159-274)||(22915672-22915787)
chr8 (159-272)||(40318280-40318393)
chr8 (160-274)||(16388840-16388954)
chr8 (159-271)||(13186059-13186171)
chr8 (159-274)||(4994971-4995085)
chr8 (153-272)||(7983421-7983540)
chr8 (157-229)||(12198947-12199019)
chr8 (157-229)||(12443375-12443447)
chr8 (159-274)||(20386744-20386859)
chr8 (160-274)||(31608827-31608941)
chr8 (154-229)||(38956031-38956106)
chr8 (160-229)||(20385568-20385637)
chr8 (160-274)||(38955703-38955817)
chr8 (161-274)||(1425336-1425448)
chr8 (162-272)||(12272920-12273030)
chr8 (158-274)||(36186381-36186494)
chr8 (158-229)||(1425051-1425122)
chr8 (158-229)||(7313364-7313435)
chr8 (160-226)||(23698308-23698375)
chr8 (160-274)||(38862618-38862732)
chr8 (179-271)||(10445650-10445742)
chr8 (160-274)||(36928479-36928590)
chr8 (160-274)||(4405974-4406088)
chr8 (159-226)||(7306398-7306465)
chr8 (158-229)||(23663543-23663614)
chr8 (158-229)||(33357496-33357567)
chr8 (179-272)||(15229950-15230043)
chr8 (163-229)||(38862922-38862988)
chr8 (158-227)||(16388581-16388650)
chr8 (160-264)||(42803542-42803646)
chr8 (179-274)||(11674714-11674809)
chr8 (181-272)||(25124584-25124675)
chr8 (179-274)||(36325253-36325348)
chr8 (160-271)||(44664508-44664619)
chr8 (160-274)||(2535864-2535978)
chr8 (162-229)||(12199265-12199332)
chr8 (162-229)||(12443693-12443760)
chr8 (158-229)||(13186418-13186489)
chr8 (158-229)||(34060487-34060558)
chr8 (198-272)||(35634413-35634487)
chr8 (162-229)||(40317966-40318033)
chr8 (159-229)||(8316652-8316722)
chr8 (179-272)||(15230245-15230338)
chr8 (160-229)||(5960046-5960115)
chr8 (161-274)||(30712031-30712143)
chr8 (161-274)||(30719808-30719920)
chr8 (159-272)||(34061644-34061757)
chr8 (198-270)||(37542262-37542334)
chr8 (162-230)||(9065667-9065735)
chr8 (162-274)||(34177284-34177396)
chr8 (179-270)||(44664824-44664915)
chr8 (198-272)||(234054-234128)
chr8 (198-272)||(710465-710539)
chr8 (198-272)||(747677-747751)
chr8 (198-272)||(871572-871646)
chr8 (160-274)||(2534695-2534809)
chr8 (158-229)||(7295286-7295357)
chr8 (180-274)||(38845582-38845676)
chr8 (158-217)||(39072012-39072071)
chr8 (179-272)||(11674979-11675072)
chr8 (179-268)||(25124881-25124970)
chr8 (179-271)||(6471709-6471801)
chr8 (160-209)||(34685636-34685685)
chr8 (158-229)||(4994655-4994726)
chr8 (181-271)||(42945429-42945519)
chr8 (179-272)||(23505071-23505164)
chr8 (179-272)||(23507741-23507834)
chr8 (214-271)||(39474600-39474657)
chr8 (164-229)||(36186105-36186170)
chr8 (180-232)||(2266817-2266869)
chr8 (180-232)||(38845319-38845371)
chr8 (180-232)||(44406877-44406929)
[»] chr7 (83 HSPs)
chr7 (159-274)||(17102019-17102134)
chr7 (155-274)||(28469322-28469441)
chr7 (161-274)||(6253472-6253585)
chr7 (160-274)||(10935794-10935908)
chr7 (161-274)||(32299019-32299132)
chr7 (159-274)||(6571012-6571127)
chr7 (159-274)||(27991738-27991853)
chr7 (158-274)||(27396909-27397025)
chr7 (159-274)||(19204488-19204603)
chr7 (159-274)||(22871591-22871706)
chr7 (160-274)||(42731419-42731533)
chr7 (161-274)||(23181308-23181421)
chr7 (158-271)||(45010921-45011034)
chr7 (165-274)||(40379774-40379883)
chr7 (158-274)||(5457221-5457337)
chr7 (158-229)||(17102348-17102419)
chr7 (159-229)||(6253799-6253869)
chr7 (163-229)||(27992067-27992133)
chr7 (159-229)||(32298776-32298846)
chr7 (160-271)||(2640495-2640607)
chr7 (162-274)||(24388821-24388933)
chr7 (158-229)||(48788801-48788872)
chr7 (158-232)||(20426686-20426760)
chr7 (159-229)||(24389144-24389214)
chr7 (156-229)||(34799517-34799590)
chr7 (163-271)||(42019914-42020022)
chr7 (160-272)||(42362450-42362562)
chr7 (179-266)||(16803967-16804054)
chr7 (163-274)||(37656855-37656966)
chr7 (149-272)||(42731735-42731858)
chr7 (159-229)||(2640177-2640247)
chr7 (159-229)||(10936153-10936223)
chr7 (155-229)||(18670222-18670296)
chr7 (159-229)||(27396628-27396698)
chr7 (179-272)||(42618225-42618318)
chr7 (160-229)||(13386106-13386175)
chr7 (179-271)||(32068411-32068503)
chr7 (159-227)||(28469009-28469077)
chr7 (179-274)||(32680878-32680973)
chr7 (169-272)||(32934357-32934460)
chr7 (161-229)||(42019598-42019666)
chr7 (158-229)||(28105499-28105570)
chr7 (154-209)||(34793898-34793953)
chr7 (179-272)||(42617930-42618023)
chr7 (198-270)||(32068134-32068206)
chr7 (179-271)||(33828289-33828381)
chr7 (160-229)||(37657196-37657265)
chr7 (160-229)||(40380043-40380112)
chr7 (160-229)||(43123175-43123244)
chr7 (158-274)||(18086287-18086403)
chr7 (154-274)||(32688532-32688652)
chr7 (156-274)||(17886804-17886922)
chr7 (162-229)||(19204817-19204884)
chr7 (213-271)||(22081874-22081932)
chr7 (180-274)||(30948443-30948537)
chr7 (198-272)||(39274908-39274982)
chr7 (158-272)||(43266580-43266694)
chr7 (160-274)||(18087652-18087766)
chr7 (179-272)||(25453147-25453240)
chr7 (198-271)||(28890617-28890690)
chr7 (159-208)||(29141556-29141605)
chr7 (179-271)||(32934663-32934755)
chr7 (161-209)||(1960254-1960302)
chr7 (181-272)||(25628499-25628590)
chr7 (158-268)||(29144302-29144412)
chr7 (160-272)||(33808323-33808435)
chr7 (198-272)||(23058467-23058541)
chr7 (198-272)||(25453442-25453516)
chr7 (214-272)||(25628792-25628850)
chr7 (198-268)||(27138259-27138329)
chr7 (196-274)||(32053457-32053535)
chr7 (159-270)||(32687396-32687507)
chr7 (180-274)||(34928933-34929027)
chr7 (169-232)||(39686543-39686606)
chr7 (180-274)||(39686817-39686911)
chr7 (158-268)||(43266264-43266374)
chr7 (179-272)||(46204440-46204533)
chr7 (216-272)||(22081615-22081671)
chr7 (179-274)||(13044691-13044786)
chr7 (181-229)||(17885649-17885697)
chr7 (156-232)||(20425474-20425550)
chr7 (180-232)||(30948180-30948232)
chr7 (180-232)||(34928670-34928722)
[»] chr1 (90 HSPs)
chr1 (160-274)||(6367562-6367676)
chr1 (158-274)||(23209641-23209757)
chr1 (159-274)||(25647883-25647998)
chr1 (159-274)||(26024422-26024537)
chr1 (160-274)||(40772507-40772621)
chr1 (156-274)||(47999406-47999524)
chr1 (158-274)||(183505-183622)
chr1 (159-274)||(17662164-17662279)
chr1 (160-271)||(34464449-34464560)
chr1 (158-273)||(41098731-41098846)
chr1 (157-271)||(36694565-36694679)
chr1 (157-271)||(36710666-36710780)
chr1 (161-274)||(13914381-13914494)
chr1 (158-232)||(35473629-35473703)
chr1 (160-229)||(26024751-26024820)
chr1 (158-274)||(34464763-34464879)
chr1 (158-274)||(35152341-35152457)
chr1 (162-274)||(40210684-40210796)
chr1 (163-273)||(17692500-17692610)
chr1 (156-274)||(19515815-19515933)
chr1 (164-274)||(1103463-1103575)
chr1 (159-272)||(7820953-7821066)
chr1 (169-274)||(14878980-14879085)
chr1 (158-274)||(19017943-19018059)
chr1 (159-271)||(37578509-37578621)
chr1 (162-274)||(42248475-42248587)
chr1 (163-271)||(46163033-46163141)
chr1 (163-274)||(24009855-24009966)
chr1 (160-274)||(30711327-30711441)
chr1 (161-274)||(4960541-4960654)
chr1 (160-229)||(183221-183290)
chr1 (160-229)||(34850424-34850493)
chr1 (160-229)||(47999123-47999192)
chr1 (159-274)||(17691218-17691333)
chr1 (158-229)||(30711686-30711757)
chr1 (160-274)||(34849011-34849125)
chr1 (158-229)||(37578190-37578261)
chr1 (158-272)||(40714757-40714871)
chr1 (158-229)||(43759181-43759252)
chr1 (159-229)||(6367921-6367991)
chr1 (155-229)||(36694277-36694351)
chr1 (155-229)||(36710378-36710452)
chr1 (155-274)||(5734005-5734123)
chr1 (160-235)||(24009575-24009650)
chr1 (198-272)||(31050988-31051062)
chr1 (158-229)||(51015631-51015702)
chr1 (159-229)||(17661851-17661920)
chr1 (189-274)||(28011392-28011477)
chr1 (158-271)||(40714442-40714555)
chr1 (159-229)||(40772818-40772888)
chr1 (179-271)||(17188973-17189065)
chr1 (161-229)||(35152689-35152757)
chr1 (159-227)||(51019710-51019778)
chr1 (158-229)||(13914066-13914137)
chr1 (198-272)||(20760819-20760893)
chr1 (160-274)||(46899061-46899175)
chr1 (198-272)||(49955385-49955459)
chr1 (159-229)||(1103820-1103890)
chr1 (158-271)||(1841457-1841570)
chr1 (198-271)||(12905974-12906047)
chr1 (178-271)||(32917278-32917371)
chr1 (167-229)||(49723085-49723147)
chr1 (156-229)||(1841817-1841890)
chr1 (160-208)||(26234430-26234478)
chr1 (157-229)||(42533021-42533093)
chr1 (198-264)||(17189173-17189239)
chr1 (180-274)||(33442877-33442971)
chr1 (198-272)||(35040928-35041002)
chr1 (164-271)||(41099050-41099157)
chr1 (158-272)||(49955661-49955775)
chr1 (159-229)||(19017628-19017698)
chr1 (179-272)||(28011653-28011746)
chr1 (163-209)||(40435348-40435394)
chr1 (160-229)||(32917619-32917688)
chr1 (161-229)||(13300263-13300331)
chr1 (159-274)||(5735025-5735140)
chr1 (160-207)||(6518177-6518224)
chr1 (179-269)||(30326515-30326605)
chr1 (160-231)||(31197065-31197136)
chr1 (158-272)||(37929416-37929530)
chr1 (154-229)||(40210364-40210439)
chr1 (179-272)||(24905186-24905279)
chr1 (159-272)||(45749841-45749954)
chr1 (159-229)||(48779478-48779548)
chr1 (159-208)||(7231629-7231678)
chr1 (160-229)||(14879317-14879386)
chr1 (157-229)||(19322889-19322961)
chr1 (179-274)||(24905450-24905544)
chr1 (157-229)||(44522144-44522216)
chr1 (157-268)||(45750160-45750271)
[»] scaffold0007 (2 HSPs)
scaffold0007 (157-274)||(1766-1883)
scaffold0007 (159-227)||(2102-2170)
[»] chr5 (81 HSPs)
chr5 (149-274)||(5993878-5994003)
chr5 (159-272)||(11761748-11761861)
chr5 (159-274)||(24547439-24547554)
chr5 (160-274)||(27587148-27587262)
chr5 (157-274)||(39453297-39453414)
chr5 (158-274)||(35512146-35512262)
chr5 (160-274)||(3529156-3529270)
chr5 (158-274)||(13962862-13962978)
chr5 (157-274)||(20814449-20814566)
chr5 (159-272)||(18670201-18670311)
chr5 (158-274)||(38475313-38475429)
chr5 (159-274)||(16157169-16157284)
chr5 (160-274)||(28771152-28771266)
chr5 (158-274)||(20840531-20840647)
chr5 (156-229)||(28770865-28770938)
chr5 (158-274)||(32242240-32242356)
chr5 (163-270)||(5024336-5024443)
chr5 (159-273)||(17202398-17202512)
chr5 (160-274)||(35920498-35920612)
chr5 (159-229)||(11762076-11762146)
chr5 (163-267)||(13362549-13362653)
chr5 (162-270)||(16082979-16083087)
chr5 (159-271)||(21265458-21265571)
chr5 (159-274)||(6150453-6150568)
chr5 (158-229)||(14194421-14194492)
chr5 (161-274)||(18247087-18247198)
chr5 (158-229)||(24547175-24547246)
chr5 (159-229)||(3528872-3528942)
chr5 (157-274)||(14194737-14194853)
chr5 (162-271)||(19892625-19892734)
chr5 (160-229)||(27587474-27587543)
chr5 (153-229)||(20840796-20840872)
chr5 (159-229)||(42265734-42265804)
chr5 (160-229)||(17202758-17202827)
chr5 (159-227)||(39453660-39453728)
chr5 (179-274)||(41930535-41930630)
chr5 (158-229)||(28269420-28269491)
chr5 (162-229)||(35512473-35512540)
chr5 (159-229)||(18247435-18247505)
chr5 (157-229)||(29646359-29646431)
chr5 (167-274)||(38442075-38442182)
chr5 (160-227)||(186780-186847)
chr5 (159-271)||(11047437-11047548)
chr5 (162-229)||(19892310-19892377)
chr5 (198-272)||(33871377-33871451)
chr5 (163-229)||(21257520-21257586)
chr5 (163-229)||(43159173-43159239)
chr5 (160-229)||(5024019-5024088)
chr5 (158-207)||(6150801-6150850)
chr5 (156-272)||(17544362-17544478)
chr5 (179-274)||(6758148-6758243)
chr5 (165-229)||(8322763-8322827)
chr5 (198-272)||(20152819-20152893)
chr5 (172-274)||(29646676-29646777)
chr5 (180-274)||(31482685-31482779)
chr5 (158-229)||(37991197-37991268)
chr5 (163-209)||(11047815-11047861)
chr5 (163-229)||(11740690-11740756)
chr5 (161-227)||(19517968-19518034)
chr5 (159-229)||(32242601-32242670)
chr5 (198-270)||(8875487-8875559)
chr5 (179-271)||(33871653-33871745)
chr5 (161-206)||(38442449-38442494)
chr5 (159-274)||(186419-186533)
chr5 (161-209)||(16156856-16156904)
chr5 (180-274)||(1505987-1506081)
chr5 (166-273)||(5256327-5256433)
chr5 (159-229)||(6301902-6301970)
chr5 (161-272)||(11741833-11741944)
chr5 (158-209)||(20814134-20814185)
chr5 (161-272)||(35920229-35920340)
chr5 (163-229)||(5835785-5835851)
chr5 (159-229)||(16083302-16083372)
chr5 (156-194)||(27937051-27937089)
chr5 (159-229)||(40150173-40150243)
chr5 (163-208)||(27937379-27937424)
chr5 (157-206)||(28269762-28269810)
chr5 (180-232)||(1506292-1506344)
chr5 (157-209)||(13963208-13963260)
chr5 (180-232)||(31482422-31482474)
chr5 (162-206)||(37992670-37992714)
[»] scaffold0020 (2 HSPs)
scaffold0020 (158-274)||(139670-139786)
scaffold0020 (163-226)||(140003-140066)
[»] scaffold0031 (2 HSPs)
scaffold0031 (160-274)||(68965-69079)
scaffold0031 (160-229)||(69324-69393)
[»] scaffold0005 (2 HSPs)
scaffold0005 (159-274)||(37877-37992)
scaffold0005 (160-226)||(37564-37630)
[»] scaffold0707 (1 HSPs)
scaffold0707 (159-229)||(6438-6508)
[»] scaffold0128 (1 HSPs)
scaffold0128 (163-270)||(19860-19967)
[»] scaffold0075 (2 HSPs)
scaffold0075 (160-241)||(14738-14818)
scaffold0075 (158-207)||(14427-14476)
[»] scaffold0328 (2 HSPs)
scaffold0328 (157-271)||(11455-11569)
scaffold0328 (200-272)||(11180-11252)
[»] scaffold0775 (1 HSPs)
scaffold0775 (155-272)||(4957-5074)
[»] scaffold0388 (2 HSPs)
scaffold0388 (179-270)||(12555-12646)
scaffold0388 (215-271)||(12295-12351)
[»] scaffold0771 (1 HSPs)
scaffold0771 (198-272)||(958-1032)
[»] scaffold0599 (1 HSPs)
scaffold0599 (198-272)||(2431-2505)
[»] scaffold0006 (2 HSPs)
scaffold0006 (214-272)||(221844-221902)
scaffold0006 (158-272)||(222103-222217)
[»] scaffold0205 (2 HSPs)
scaffold0205 (179-274)||(21252-21347)
scaffold0205 (179-267)||(21028-21116)
[»] scaffold0042 (1 HSPs)
scaffold0042 (198-272)||(12094-12168)


Alignment Details
Target: chr2 (Bit Score: 130; Significance: 2e-67; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 30 - 159
Target Start/End: Original strand, 33912637 - 33912766
Alignment:
Q  30 ggttacctctaggcactagataaactataaagtggtgaatgataaattataagaatagttcttattttaacaactttttaaaaatatgaatactattatt 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33912637 ggttacctctaggcactagataaactataaagtggtgaatgataaattataagaatagttcttattttaacaactttttaaaaatatgaatactattatt 33912736  T
Q  130 ccttcaaaatagtctttgtaaatataaata 159  Q
    ||||||||||||||||||||||||||||||    
T  33912737 ccttcaaaatagtctttgtaaatataaata 33912766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 158 - 274
Target Start/End: Complemental strand, 11163453 - 11163337
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatc 256  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||| |||||||||| ||| ||| ||||||    
T  11163453 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgg-caatttacctctgcattgtttaatc 11163355  T
Q  257 atttaaaatttcgtccct 274  Q
    ||||||||||||||||||    
T  11163354 atttaaaatttcgtccct 11163337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 159 - 274
Target Start/End: Original strand, 15848087 - 15848202
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatca 257  Q
    ||||||| |||||||||| |||||||||| |||||| |||||||||||||| |||||||||||||||||||||  |||||||| |||| ||| |||||||    
T  15848087 aggcttatatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgg-taatttacccttgcattgtttaatca 15848185  T
Q  258 tttaaaatttcgtccct 274  Q
    |||||||||||||||||    
T  15848186 tttaaaatttcgtccct 15848202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 158 - 274
Target Start/End: Original strand, 6657876 - 6657992
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatc 256  Q
    |||||||||||||||||||||||||||||| | |||| |||||||||||||| |||||||||| |||||| ||| |||||||||  ||| ||| ||||||    
T  6657876 taggcttaaatatgtatttgatccttgcaatttggggtcgtttaaaaattggtccctgtaatcactaatcatgg-caatttacccctgcattgtttaatc 6657974  T
Q  257 atttaaaatttcgtccct 274  Q
    ||||||||||||||||||    
T  6657975 atttaaaatttcgtccct 6657992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 159 - 274
Target Start/End: Original strand, 45556111 - 45556226
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatca 257  Q
    ||||||||||||||||||||||||||||| |||||  |||||||||||||| ||||||||||||||||||||| ||||||| |  ||| ||| |||||||    
T  45556111 aggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccctgtaatcgctaatcctgg-caatttatccctgcattgtttaatca 45556209  T
Q  258 tttaaaatttcgtccct 274  Q
    |||||||||| ||||||    
T  45556210 tttaaaattttgtccct 45556226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 160 - 274
Target Start/End: Original strand, 16099055 - 16099169
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcat 258  Q
    |||||||||||||||||||| ||||||| |||||| | |||||||||||| |||||||||| |||||||||| |||||||||  ||| ||| ||||||||    
T  16099055 ggcttaaatatgtatttgattcttgcaattaggggtcatttaaaaattggtccctgtaatcactaatcctgg-caatttacccctgcattgtttaatcat 16099153  T
Q  259 ttaaaatttcgtccct 274  Q
    ||||||||||||||||    
T  16099154 ttaaaatttcgtccct 16099169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 158 - 274
Target Start/End: Complemental strand, 44714190 - 44714075
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatc 256  Q
    ||||||||||||||| ||| |||||||||| |||||| |||||||||||| | ||||||||| ||||||||||| ||||||||| |||| ||| ||||||    
T  44714190 taggcttaaatatgt-tttcatccttgcaattaggggtcgtttaaaaattagtccctgtaattgctaatcctgg-caatttacccttgcattgtttaatc 44714093  T
Q  257 atttaaaatttcgtccct 274  Q
    ||||||||||||||||||    
T  44714092 atttaaaatttcgtccct 44714075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 274
Target Start/End: Original strand, 36382159 - 36382275
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatc 256  Q
    ||||||||| ||||||||| |||||||||| |||||  |||||||||||||| |||| |||||||||||||| | ||||||||| |||| ||| ||||||    
T  36382159 taggcttaagtatgtatttcatccttgcaattagggttcgtttaaaaattggtccctataatcgctaatcct-gacaatttacccttgcattgtttaatc 36382257  T
Q  257 atttaaaatttcgtccct 274  Q
    |||||||||||| |||||    
T  36382258 atttaaaatttcatccct 36382275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 167 - 274
Target Start/End: Original strand, 39498317 - 39498424
Alignment:
Q  167 atatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaat 265  Q
    |||||||||||||||||| || |||||| |||||||||||||| ||||||||||| ||||||||| |||||||||  | | ||| |||||||||||||||    
T  39498317 atatgtatttgatccttgtaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctgg-caatttacccctacattgtttaatcatttaaaat 39498415  T
Q  266 ttcgtccct 274  Q
    |||||||||    
T  39498416 ttcgtccct 39498424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 274
Target Start/End: Complemental strand, 37895772 - 37895661
Alignment:
Q  163 ttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcattta 261  Q
    |||||||||||||| |||||||||| || ||| |||||||||| |||  || ||||||||||||||||| ||||||||  |||| ||| |||||||||||    
T  37895772 ttaaatatgtatttcatccttgcaattatgggtcgtttaaaaaatggttcccgtaatcgctaatcctgg-caatttacacttgcattgtttaatcattta 37895674  T
Q  262 aaatttcgtccct 274  Q
    |||||||||||||    
T  37895673 aaatttcgtccct 37895661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 44045432 - 44045361
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||||||||| ||||| |||||| |||||||||||||| ||||||| |||||||||||    
T  44045432 taggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcct 44045361  T

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Target: chr2; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 161 - 274
Target Start/End: Original strand, 2318160 - 2318272
Alignment:
Q  161 gcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatt 259  Q
    |||||||||||||||| |||||||||| || |||  ||||||||||||| |  ||||||||||||| |||| ||||||||| |||| ||| |||||||||    
T  2318160 gcttaaatatgtatttcatccttgcaatta-gggtagtttaaaaattggtctatgtaatcgctaattctgg-caatttacccttgcattgtttaatcatt 2318257  T
Q  260 taaaatttcgtccct 274  Q
    |||||||||||||||    
T  2318258 taaaatttcgtccct 2318272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 16099453 - 16099383
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||| || ||||||||    
T  16099453 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcactaatcct 16099383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 36755517 - 36755447
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||| |||||||||| |||||| |||||||||||||| |||| ||||||||||||||    
T  36755517 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatcct 36755447  T

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Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 6658275 - 6658206
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||||||||||||| ||| || |||||||||||||| ||||||| |||||||||||    
T  6658275 ggcttaaatatgtatttgatccttgcaattagaggtcgtttaaaaattggtccctgtattcgctaatcct 6658206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 271
Target Start/End: Complemental strand, 22051421 - 22051310
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcat 258  Q
    ||||||||||||||||| || ||||||| ||| ||  ||||||||||| | | ||||||||||||||||| | ||||||||| |||| ||| ||||||||    
T  22051421 ggcttaaatatgtatttcattcttgcaattagaggttgtttaaaaattagtctctgtaatcgctaatcctag-caatttacccttgcattgtttaatcat 22051323  T
Q  259 ttaaaatttcgtc 271  Q
    |||||||||||||    
T  22051322 ttaaaatttcgtc 22051310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 272
Target Start/End: Original strand, 36479719 - 36479830
Alignment:
Q  162 cttaaatatgtatttgatcctt-gcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatt 259  Q
    ||||||||||||||| |||||| |||| |||||| |||||||||||||| || |||||||||||||| | | || |||||| |||| ||| |||||||||    
T  36479719 cttaaatatgtatttcatcctttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttag-cattttacccttgcattgtttaatcatt 36479817  T
Q  260 taaaatttcgtcc 272  Q
    |||||||||||||    
T  36479818 taaaatttcgtcc 36479830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 274
Target Start/End: Complemental strand, 14900859 - 14900766
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgttaatcatttaaaatttcgtccct 274  Q
    ||||||||| |||||| |||||||||||| | ||||||||| ||||||||||| ||||||| | ||| | ||||||||||||||||||||||||||    
T  14900859 tccttgcaattaggggtcgtttaaaaatttgtccctgtaattgctaatcctgg-caatttagccttg-tatgttaatcatttaaaatttcgtccct 14900766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 274
Target Start/End: Original strand, 39423515 - 39423629
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcat 258  Q
    |||||||||| |||||| ||||||| || || ||| |||||||||||||| | |||||||||||||| |||| ||||||| | |||  ||| ||||||||    
T  39423515 ggcttaaatacgtatttcatccttgtaattacgggtcgtttaaaaattggtctctgtaatcgctaattctgg-caatttatccttgtattgtttaatcat 39423613  T
Q  259 ttaaaatttcgtccct 274  Q
    ||||||||||||||||    
T  39423614 ttaaaatttcgtccct 39423629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 39498709 - 39498638
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||||||||||||||| |||||  |||||||||||||| || |||| |||||||||||    
T  39498709 taggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccatgtattcgctaatcct 39498638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 15604358 - 15604451
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtcc 272  Q
    ||||||||| |||| | | |||||||||| | ||||||||||||||||||||| ||||||||| |||| ||| ||||||||||||||||||||||    
T  15604358 tccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcctgg-caatttacccttgcattgtttaatcatttaaaatttcgtcc 15604451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 160 - 274
Target Start/End: Original strand, 25230102 - 25230216
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgttaatcatt 259  Q
    ||||||||||||||||| |||| ||||| |||||| |||||||||||||| ||||||| ||||||||||| || || |  ||||    ||  ||||||||    
T  25230102 ggcttaaatatgtatttaatccctgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaattactaatcatt 25230201  T
Q  260 taaaatttcgtccct 274  Q
    |||||||||||||||    
T  25230202 taaaatttcgtccct 25230216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 274
Target Start/End: Complemental strand, 25231279 - 25231162
Alignment:
Q  157 ataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaat 255  Q
    |||||||||||||||||||| |||| ||||| |||||| |||||||||||||| || |||| ||||||||||| | ||| ||||| ||||     |||||    
T  25231279 ataggcttaaatatgtatttaatccctgcaattaggggtcgtttaaaaattggtccatgtattcgctaatcctag-caaattacccttgcaaactttaat 25231181  T
Q  256 catttaaaatttcgtccct 274  Q
    |||||||||||||||||||    
T  25231180 catttaaaatttcgtccct 25231162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 37895346 - 37895416
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||| |||||||||| || ||| |||||||||||||| ||||||| |||||||||||    
T  37895346 aggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatcct 37895416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 163 - 272
Target Start/End: Original strand, 6588686 - 6588795
Alignment:
Q  163 ttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgttaatcatttaa 262  Q
    |||||||||||||| |||||||||| |||||| |||||||||||||| || |||| ||||||||||| || || |  ||||   ||  ||||||||||||    
T  6588686 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcattctttaatcatttaa 6588785  T
Q  263 aatttcgtcc 272  Q
    ||||||||||    
T  6588786 aatttcgtcc 6588795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 162 - 274
Target Start/End: Original strand, 10712725 - 10712837
Alignment:
Q  162 cttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcattt 260  Q
    ||||| ||||||||| |||||||||| |||||  |||||||||||||| || | |||||  ||||||||| ||||||||| |||| ||| ||||||||||    
T  10712725 cttaagtatgtatttcatccttgcaattagggttcgtttaaaaattggtccttataatcattaatcctgg-caatttacccttgcattgtttaatcattt 10712823  T
Q  261 aaaatttcgtccct 274  Q
    |||||||| |||||    
T  10712824 aaaatttcatccct 10712837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 159 - 228
Target Start/End: Complemental strand, 36382556 - 36382487
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcc 228  Q
    |||||||||||||||||| |||||||||| || ||| |||||||||||||| ||||||| ||||||||||    
T  36382556 aggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatcc 36382487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 156 - 229
Target Start/End: Complemental strand, 39423947 - 39423874
Alignment:
Q  156 aataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||||||| |||||||||| |||||| |||||||||||||  |||| || |||||||||||    
T  39423947 aataggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccctatattcgctaatcct 39423874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 45556481 - 45556408
Alignment:
Q  154 taaataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatc 227  Q
    |||| |||||||||||||||||||||||||| || |||||| |||||||||||||| | ||||| |||||||||    
T  45556481 taaaaaggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtcgctgtattcgctaatc 45556408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 270
Target Start/End: Complemental strand, 28226151 - 28226060
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgt 270  Q
    ||||||||| |||| | | |||||||||| | ||||||||||||||||||||| ||||||||| |||| ||| ||||||||||||||||||||    
T  28226151 tccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgg-caatttacccttgcattgtttaatcatttaaaatttcgt 28226060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 33912430 - 33912474
Alignment:
Q  30 ggttacctctaggcactagataaactataaagtggtgaatgataa 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  33912430 ggttacctctaggcactagataaactataaagtggtgaatgataa 33912474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 274
Target Start/End: Original strand, 44044113 - 44044228
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgttaatcat 258  Q
    ||||||||||||||||||||||| ||||| ||||||  ||||||||||||| ||||||| || |||||||| |  || | |||||    |  ||||||||    
T  44044113 aggcttaaatatgtatttgatccctgcaattaggggtggtttaaaaattggtccctgtattcactaatccttgaaaactaaccttgtaatcattaatcat 44044212  T
Q  259 ttaaaatttcgtccct 274  Q
    ||||||||||||||||    
T  44044213 ttaaaatttcgtccct 44044228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 272
Target Start/End: Original strand, 3555244 - 3555362
Alignment:
Q  154 taaataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtta 253  Q
    |||| |||||||||||||||||| |||||||||| |||||| |||||||||||||| | ||||| ||| || ||||  | ||||  ||||   ||  |||    
T  3555244 taaaaaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgttattccttacaaattagccttgcattcttta 3555343  T
Q  254 atcatttaaaatttcgtcc 272  Q
    |||||||||||||||||||    
T  3555344 atcatttaaaatttcgtcc 3555362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 272
Target Start/End: Complemental strand, 15604746 - 15604653
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtcc 272  Q
    ||||||||| |||| | | |||||||| | | ||||||||||||||||||||| ||||||||| |||| ||| ||||||||||||||||||||||    
T  15604746 tccttgcaattaggtgtcatttaaaaactagtccctgtaatcgctaatcctgg-caatttacccttgcattgtttaatcatttaaaatttcgtcc 15604653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 11163054 - 11163123
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||||||| |||||| ||  || |||||||||||||| ||||||| |||||||||||    
T  11163054 ggcttaaatatgtatttgatctttgcaattaaaggtcgtttaaaaattggtccctgtattcgctaatcct 11163123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 252
Target Start/End: Original strand, 34447812 - 34447904
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt 252  Q
    |||||||||||||||||| ||||||| || |||||| | |||||||||||| |||| ||||||| |||||| | ||||||||| |||| |||||    
T  34447812 aggcttaaatatgtatttcatccttgtaattaggggtcatttaaaaattggtccctataatcgcaaatcct-gacaatttacccttgcattgtt 34447904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 272
Target Start/End: Complemental strand, 10713151 - 10713039
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgttaatcatt 259  Q
    ||||||||||||||||| |||||||||| || ||| ||||||||||||||   ||||| ||||||||||| || ||||  ||||    | ||||||||||    
T  10713151 ggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtttctgtattcgctaatccttgcaaattagccttgcaatcgttaatcatt 10713052  T
Q  260 taaaatttcgtcc 272  Q
    |||||| ||||||    
T  10713051 taaaatgtcgtcc 10713039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 272
Target Start/End: Original strand, 30729621 - 30729733
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgttaatcatt 259  Q
    ||||||||||||||||| |||||||||| |||  | |||||||||||||| |||| || ||||||||||| || ||||  ||||   ||  |||||| ||    
T  30729621 ggcttaaatatgtatttcatccttgcaattagacgtcgtttaaaaattggtccctatattcgctaatccttgcaaattgcccttgcattctttaatcgtt 30729720  T
Q  260 taaaatttcgtcc 272  Q
    |||||||||||||    
T  30729721 taaaatttcgtcc 30729733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 36480144 - 36480077
Alignment:
Q  162 cttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||| |||||||||| || ||| |||||||||||||| |||| || |||||||||||    
T  36480144 cttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctatattcgctaatcct 36480077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 272
Target Start/End: Complemental strand, 8710875 - 8710782
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtcc 272  Q
    ||||||||| |||| | | |||||||||| | || |||||||||||||||| | ||||||||| |||| ||| ||||||||||||||||||||||    
T  8710875 tccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcct-gacaatttacccttgcattgtttaatcatttaaaatttcgtcc 8710782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 229
Target Start/End: Complemental strand, 13692637 - 13692579
Alignment:
Q  171 gtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||| |||||||||| |||||| |||||||||||||| ||||||| |||||||||||    
T  13692637 gtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcct 13692579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 272
Target Start/End: Complemental strand, 15848518 - 15848404
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgttaatca 257  Q
    |||||||||||| |||||| |||||||||| |||||| ||||||||||||||    |||| ||||||||||| || || | |||||    |  |||||||    
T  15848518 taggcttaaataagtatttcatccttgcaattaggggtcgtttaaaaattggtttatgtattcgctaatccttgcgaactaaccttgcaatcattaatca 15848419  T
Q  258 tttaaaatttcgtcc 272  Q
    |||||||||||||||    
T  15848418 tttaaaatttcgtcc 15848404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 229
Target Start/End: Complemental strand, 6307151 - 6307077
Alignment:
Q  154 taaataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||| ||||||||||||||||| ||| |||||| ||| || |||||||||||||| |||| |||||| |||||||    
T  6307151 taaattggcttaaatatgtatttcatc-ttgcaattagtggtcgtttaaaaattggtccctataatcgttaatcct 6307077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 274
Target Start/End: Original strand, 33739723 - 33739817
Alignment:
Q  180 ccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatcatttaaaatttcgtccct 274  Q
    |||||||| |||| ||| |||||||||| | ||||||||| ||||||||||| || |||| |  |||  |||||||||||||||||||||||||||    
T  33739723 ccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctgg-cattttaaccctgcaattgttaatcatttaaaatttcgtccct 33739817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 34448225 - 34448154
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||| |||||||| |||||||||| ||||||  ||||||||||||| |||| || ||| |||||||    
T  34448225 taggcttaaacatgtatttcatccttgcaattaggggttgtttaaaaattggtccctatattcgttaatcct 34448154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 2318939 - 2318889
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgg 209  Q
    |||||||||||||||||| |||||| ||| |||||| ||||||||||||||    
T  2318939 aggcttaaatatgtatttcatccttccaattaggggtcgtttaaaaattgg 2318889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 3556437 - 3556368
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||  |||| |||||||||| || ||| |||||||||||||| | ||||||||| |||||||    
T  3556437 ggcttaaatatacatttcatccttgcaattatgggtcgtttaaaaattggtctctgtaatcgttaatcct 3556368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 9076495 - 9076446
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgg 209  Q
    ||||||||||||||||| || ||||||| |||||| ||||||||||||||    
T  9076495 ggcttaaatatgtattttattcttgcaattaggggtcgtttaaaaattgg 9076446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 274
Target Start/End: Original strand, 6573538 - 6573657
Alignment:
Q  155 aaataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-tta 253  Q
    ||||||||||||  |||| ||| |||| | ||| |||| | | |||||||||| | || |||||||||||||||||| ||||||||| |||  ||| |||    
T  6573538 aaataggcttaatgatgtgtttcatccctccaattaggcgtcatttaaaaattcgtccatgtaatcgctaatcctgg-caatttacccttgaattgttta 6573636  T
Q  254 atcatttaaaatttcgtccct 274  Q
    ||||||||||| || ||||||    
T  6573637 atcatttaaaaatttgtccct 6573657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 274
Target Start/End: Complemental strand, 41248961 - 41248842
Alignment:
Q  155 aaataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgtta 253  Q
    |||||||||||   |||| ||| | |||||||| |||| ||| |||||||||| | ||||||||| ||||||||||| || |||| |  |||  ||||||    
T  41248961 aaataggcttattgatgtgtttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctgg-cattttaaccctgcaattgtta 41248863  T
Q  254 atcatttaaaatttcgtccct 274  Q
    ||| |||||||||||||||||    
T  41248862 atcgtttaaaatttcgtccct 41248842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 274
Target Start/End: Complemental strand, 13996050 - 13995956
Alignment:
Q  180 ccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatcatttaaaatttcgtccct 274  Q
    |||||||| |||| ||| |||||||||| | ||||||||| ||||||||||| || |||| |  |||  ||||||||| |||||||||||||||||    
T  13996050 ccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctgg-cattttaaccctgcaattgttaatcgtttaaaatttcgtccct 13995956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 28228668 - 28228747
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatt 237  Q
    ||||||| ||||||| |||  ||| ||||| |||||| | |||||||||||| ||||||||||| ||||| |||| ||||    
T  28228668 taggctttaatatgtgtttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcgtggcaaatt 28228747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 274
Target Start/End: Complemental strand, 33062427 - 33062333
Alignment:
Q  180 ccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatcatttaaaatttcgtccct 274  Q
    |||||||| |||| ||| |||||||||| | ||||||||| ||||||||||| || |||| |  |||  |||||||||||||| ||||||||||||    
T  33062427 ccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctgg-cattttaaccctgcaattgttaatcatttataatttcgtccct 33062333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 271
Target Start/End: Original strand, 36755094 - 36755204
Alignment:
Q  161 gcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatt 259  Q
    |||||||||||||||| ||| ||  || ||| || ||||||||||||||  | ||||| ||||||||||   ||||||||| || | ||| |||||||||    
T  36755094 gcttaaatatgtatttcatctttataattagaggtcgtttaaaaattggttcatgtaaccgctaatcct-aacaatttacccttacattgtttaatcatt 36755192  T
Q  260 taaaatttcgtc 271  Q
    ||||||||||||    
T  36755193 taaaatttcgtc 36755204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 271
Target Start/End: Original strand, 11830402 - 11830475
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtc 271  Q
    |||||||||| | ||||||||| |||||||||  | |||||||| |||| ||||| |||||||||||||||||||    
T  11830402 tttaaaaattagtccctgtaattgctaatcctaac-aatttacccttgcattgtttaatcatttaaaatttcgtc 11830475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 272
Target Start/End: Original strand, 1695760 - 1695852
Alignment:
Q  180 ccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatcatttaaaatttcgtcc 272  Q
    |||||||| |||| ||| |||||||||| | ||||||||| ||||||||||| || |||| |  |||  |||||||||||||||||||| ||||    
T  1695760 ccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctgg-cattttaaccctgcaattgttaatcatttaaaatttggtcc 1695852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 274
Target Start/End: Original strand, 6573085 - 6573160
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtccct 274  Q
    |||||||||| | || |||||||||||||| |||| |||||||||| || ||||| |||||||||||| |||||||||    
T  6573085 tttaaaaatttgtccatgtaatcgctaatcttggc-aatttacctt-gcattgtttaatcatttaaaaattcgtccct 6573160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 274
Target Start/End: Original strand, 25892432 - 25892508
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtccct 274  Q
    |||||||||| | || |||||||||||||||||| ||| ||||| || | ||| |||||||||||||| |||||||||    
T  25892432 tttaaaaatttgtccatgtaatcgctaatcctgg-caaattacccttccattgtttaatcatttaaaaattcgtccct 25892508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 229
Target Start/End: Original strand, 44713799 - 44713864
Alignment:
Q  164 taaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||| ||||||| || || ||| |||||||||||||| |  |||| |||||||||||    
T  44713799 taaatatgtatttcatccttgtaattaagggtcgtttaaaaattggtcaatgtattcgctaatcct 44713864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 13995693 - 13995745
Alignment:
Q  180 ccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggc 232  Q
    |||||||| |||| ||| |||||||||| | ||||||||| ||||||||||||    
T  13995693 ccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggc 13995745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 33062070 - 33062122
Alignment:
Q  180 ccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggc 232  Q
    |||||||| |||| ||| |||||||||| | ||||||||| ||||||||||||    
T  33062070 ccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggc 33062122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 9e-39; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 158 - 274
Target Start/End: Original strand, 30337447 - 30337563
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatc 256  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||| ||||||||| |||| || |||||||    
T  30337447 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgg-caatttacccttgcattggttaatc 30337545  T
Q  257 atttaaaatttcgtccct 274  Q
    ||||||||||||||||||    
T  30337546 atttaaaatttcgtccct 30337563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 159 - 274
Target Start/End: Complemental strand, 21628142 - 21628027
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatca 257  Q
    |||||||||||||||||| |||||||||| |||||| || ||||||||||| ||||||||||||||||||| | ||||||||| |||| ||| |||||||    
T  21628142 aggcttaaatatgtatttcatccttgcaattaggggtcgcttaaaaattggtccctgtaatcgctaatcct-gacaatttacccttgcattgtttaatca 21628044  T
Q  258 tttaaaatttcgtccct 274  Q
    |||||||||| ||||||    
T  21628043 tttaaaattttgtccct 21628027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 163 - 274
Target Start/End: Original strand, 33517537 - 33517648
Alignment:
Q  163 ttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcattta 261  Q
    |||||||||||||| ||||||| || |||||  |||||||||||||| ||||||||||||||||||||| ||||||||| |||| ||| |||||||||||    
T  33517537 ttaaatatgtatttcatccttgtaattagggatcgtttaaaaattggtccctgtaatcgctaatcctgg-caatttacccttgcattgtttaatcattta 33517635  T
Q  262 aaatttcgtccct 274  Q
    |||||||||||||    
T  33517636 aaatttcgtccct 33517648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 155 - 274
Target Start/End: Original strand, 12080631 - 12080750
Alignment:
Q  155 aaataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-tta 253  Q
    |||||| ||||||| ||||||| |||||||||| |||||| |||||||||||||  ||||||||||||||||| ||| |||||||||  ||| ||| |||    
T  12080631 aaatagtcttaaatttgtatttcatccttgcaattaggggtcgtttaaaaattgctccctgtaatcgctaatcatgg-caatttacccctgcattgttta 12080729  T
Q  254 atcatttaaaatttcgtccct 274  Q
    |||||||||||||||||||||    
T  12080730 atcatttaaaatttcgtccct 12080750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 274
Target Start/End: Original strand, 26463177 - 26463293
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatc 256  Q
    |||||||||||||||||||||||| ||||| |||||| |||||||||||||| ||||||| ||| ||||||||| ||| ||||| ||||   | ||||||    
T  26463177 taggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccctgtattcgttaatcctgg-caaattacccttgcaaagtttaatc 26463275  T
Q  257 atttaaaatttcgtccct 274  Q
    ||||||||||||||||||    
T  26463276 atttaaaatttcgtccct 26463293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 160 - 274
Target Start/End: Original strand, 30725760 - 30725873
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcat 258  Q
    ||||||||||||||||| || ||||||| |||||  |||||||||||||| | ||||||||||||||||| ||||||||||| ||||  || ||||||||    
T  30725760 ggcttaaatatgtatttcattcttgcaattagggt-cgtttaaaaattggtctctgtaatcgctaatcct-gccaatttacccttgcactgtttaatcat 30725857  T
Q  259 ttaaaatttcgtccct 274  Q
    ||||||||||||||||    
T  30725858 ttaaaatttcgtccct 30725873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 150 - 229
Target Start/End: Complemental strand, 30726197 - 30726118
Alignment:
Q  150 aatataaataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||| |||||||||||||||||||||| |||||||||| |||||| |||||||||||||| ||||||| |||||||||||    
T  30726197 aataaaaataggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcct 30726118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 30337846 - 30337777
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||||||||||||| |||||| | |||||||||||| |||||||||||||||||||    
T  30337846 ggcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcct 30337777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 229
Target Start/End: Complemental strand, 681159 - 681087
Alignment:
Q  157 ataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||||| |||||||||||    
T  681159 ataggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatcct 681087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 17734185 - 17734265
Alignment:
Q  149 aaatataaataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||  | |||||| |||||||||    
T  17734185 aaatataaaaaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggttcttgtaattgctaatcct 17734265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 33647381 - 33647310
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||||| |||||||||| |||||| |||||||||||||| ||||||| |||||||||||    
T  33647381 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcct 33647310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 274
Target Start/End: Original strand, 3059254 - 3059371
Alignment:
Q  157 ataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaat 255  Q
    ||||| |||||||||||||| |||||||||| || ||| |||||||||  | | || |||||||||||||||| | ||||||||| |||| ||| |||||    
T  3059254 ataggtttaaatatgtatttcatccttgcaattaagggtcgtttaaaatattgtccatgtaatcgctaatcctag-caatttacccttgcattgtttaat 3059352  T
Q  256 catttaaaatttcgtccct 274  Q
    |||||||||||||||||||    
T  3059353 catttaaaatttcgtccct 3059371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 3059685 - 3059615
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||| |||||||||| |||||| |||||||||||||| ||||||| |||||||||||    
T  3059685 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcct 3059615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 161 - 274
Target Start/End: Complemental strand, 17734590 - 17734477
Alignment:
Q  161 gcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatt 259  Q
    ||||||||||||||||||||||| ||| || ||| |||||||||||||  || ||||||||||||||||   ||||||||| |||| ||| |||||||||    
T  17734590 gcttaaatatgtatttgatccttacaattatgggtcgtttaaaaattgatccatgtaatcgctaatcct-atcaatttacccttgcattgtttaatcatt 17734492  T
Q  260 taaaatttcgtccct 274  Q
    |||||||| ||||||    
T  17734491 taaaattttgtccct 17734477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 274
Target Start/End: Original strand, 30803858 - 30803975
Alignment:
Q  157 ataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaat 255  Q
    ||||| |||||||||||||| |||||||||| |||| | |||||||||||||  |  |||||||| ||||||||| ||||||||| || | ||| |||||    
T  30803858 atagggttaaatatgtatttcatccttgcaactaggtgtcgtttaaaaattgatctatgtaatcgttaatcctgg-caatttacccttacattgtttaat 30803956  T
Q  256 catttaaaatttcgtccct 274  Q
    |||||||||||||||||||    
T  30803957 catttaaaatttcgtccct 30803975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 33517963 - 33517893
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||| |||||||||| |||||| |||||||||||||| ||||||| |||||||||||    
T  33517963 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcct 33517893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 13379913 - 13379844
Alignment:
Q  157 ataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaat 226  Q
    ||||||||||||||||||||||||| ||||| |||||| |||||||||||||| ||||||| ||||||||    
T  13379913 ataggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccctgtattcgctaat 13379844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 274
Target Start/End: Original strand, 8089442 - 8089557
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatca 257  Q
    |||||||||||||||||   ||| ||||| |||||| |||||||||||||| |||| |||||| ||||||| | ||| ||||| |||| ||| |||||||    
T  8089442 aggcttaaatatgtattacctccctgcaattaggggtcgtttaaaaattggtccctataatcgttaatccttg-caaattacccttgcattgtttaatca 8089540  T
Q  258 tttaaaatttcgtccct 274  Q
    |||||||||||||||||    
T  8089541 tttaaaatttcgtccct 8089557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 679865 - 679935
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||||||||||||||| || ||| |||||||||||||| | ||||| |||||||||||    
T  679865 aggcttaaatatgtatttgatccttgcaattaagggtcgtttaaaaattggtctctgtattcgctaatcct 679935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 12081066 - 12080995
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||||| |||||||||| |||| | |||||||||||| | ||||||| |||||||||||    
T  12081066 taggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaatttgtccctgtattcgctaatcct 12080995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 20651008 - 20651079
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||||||||| ||||| |||||  ||||||||||||||  |||||| |||||||||||    
T  20651008 taggcttaaatatgtatttgatccctgcaattagggatcgtttaaaaattggttcctgtattcgctaatcct 20651079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 272
Target Start/End: Complemental strand, 31407285 - 31407192
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtcc 272  Q
    ||||||||| |||| | | |||||||||| | ||||||||||||||||||| | ||||||||| |||| ||| ||||||||||||||||||||||    
T  31407285 tccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcct-gacaatttacccttgcattgtttaatcatttaaaatttcgtcc 31407192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 274
Target Start/End: Complemental strand, 8090357 - 8090241
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatc 256  Q
    ||||||||||||||||||  |||||||||| |||||| |||||||||||||| || |||| || |||||||| | ||| ||||| ||||   | ||||||    
T  8090357 taggcttaaatatgtattacatccttgcaattaggggtcgtttaaaaattggtccttgtattcactaatccttg-caaattacccttgcaaagtttaatc 8090259  T
Q  257 atttaaaatttcgtccct 274  Q
    ||||||||||| ||||||    
T  8090258 atttaaaatttggtccct 8090241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 274
Target Start/End: Complemental strand, 14196993 - 14196898
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatcatttaaaatttcgtccct 274  Q
    ||||||||| |||| | |||||||||||| | ||||||||| ||||||||||| ||||||| | ||||  |||||||||||||||||||||| ||||    
T  14196993 tccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgctaatcctgg-caatttagccttgcaattgttaatcatttaaaatttcgcccct 14196898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 30804291 - 30804223
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaat 226  Q
    |||| |||||||||||||| |||||||||| |||||| |||||||||||||  ||||||| ||||||||    
T  30804291 taggattaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccctgtattcgctaat 30804223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 272
Target Start/End: Complemental strand, 21836458 - 21836344
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatc 256  Q
    |||||||||  |||| ||| |||||||||| |||| | | |||||||||| |  | |||||||||||||||| | ||||||||| |||| ||| ||||||    
T  21836458 taggcttaatgatgtgtttcatccttgcaattaggcgtcatttaaaaattagttcttgtaatcgctaatcct-gacaatttacccttgcattgtttaatc 21836360  T
Q  257 atttaaaatttcgtcc 272  Q
    ||||||||||||||||    
T  21836359 atttaaaatttcgtcc 21836344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 271
Target Start/End: Original strand, 32593487 - 32593601
Alignment:
Q  157 ataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaat 255  Q
    ||||||||||  |||| |||  ||||| ||| |||| | | |||||||||| | |||| ||||||||||||||| | |||||||| |||| |||||||||    
T  32593487 ataggcttaatgatgtgtttagtcctttcaattaggcgtcatttaaaaattagtccctataatcgctaatcctgac-aatttacccttgcatttgttaat 32593585  T
Q  256 catttaaaatttcgtc 271  Q
    ||||||||||||||||    
T  32593586 catttaaaatttcgtc 32593601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 7160823 - 7160916
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtcc 272  Q
    ||||||||| |||| | | |||||||||| | | ||||||||||||||||||| ||||||||  |||| ||| ||||||||||||||||||||||    
T  7160823 tccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctgg-caatttactcttgcattgtttaatcatttaaaatttcgtcc 7160916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 22502793 - 22502886
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtcc 272  Q
    ||||||||| |||| | | |||||||||| | || |||||||||||||||| | ||||||||| |||| ||| ||||||||||||||||||||||    
T  22502793 tccttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcct-gacaatttacccttgcattgtttaatcatttaaaatttcgtcc 22502886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 11434804 - 11434869
Alignment:
Q  162 cttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatc 227  Q
    ||||||||||||||| |||||||||| || ||| |||||||||||||| || |||| |||||||||    
T  11434804 cttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccatgtattcgctaatc 11434869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 15115339 - 15115408
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||| |||||||||| ||| |  |||||||||||||| |||| |||||| |||||||    
T  15115339 ggcttaaatatgtatttcatccttgcaattagagatcgtttaaaaattggtccctataatcgttaatcct 15115408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 15116660 - 15116591
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||| |||||||||||  ||||||||| |||||| |||||||||||||| ||  |||||||||||||||    
T  15116660 ggctttaatatgtatttcgtccttgcaattaggggtcgtttaaaaattggtcctcgtaatcgctaatcct 15116591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 271
Target Start/End: Original strand, 33646970 - 33647074
Alignment:
Q  167 atatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatcatttaaaat 265  Q
    |||| ||||| |||||| ||| || ||| |||||||||| ||  |||||||||||||||| || ||||||||||| |||| ||  |||||||||||||||    
T  33646970 atatctatttcatccttacaattaagggtcgtttaaaaagtgatccctgtaatcgctaat-cttgccaatttacccttgcattatttaatcatttaaaat 33647068  T
Q  266 ttcgtc 271  Q
    ||||||    
T  33647069 ttcgtc 33647074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 229
Target Start/End: Complemental strand, 12408602 - 12408530
Alignment:
Q  157 ataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||||| |||||| ||| ||||||  |||||||| |||| || |||| |||||||||||    
T  12408602 ataggcttaaatatgtatttcatccttacaattaggggttgtttaaaagttggtccttgtattcgctaatcct 12408530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 274
Target Start/End: Complemental strand, 25486304 - 25486209
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgct-ttgttaatcatttaaaatttcgtccct 274  Q
    ||||||||| || | | |||||||||||| | ||||||||| |||||||| ||| |||||| | ||||  |||||||||||||||||||||||||||    
T  25486304 tccttgcaactaagcgtcgtttaaaaattcgtccctgtaattgctaatcccggc-aatttagccttgcaattgttaatcatttaaaatttcgtccct 25486209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 21836085 - 21836143
Alignment:
Q  214 tgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtcc 272  Q
    ||||||||||||||||||| |||||||| |||| ||||| ||||||||||||||||||||    
T  21836085 tgtaatcgctaatcctggc-aatttacccttgcattgtttaatcatttaaaatttcgtcc 21836143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 274
Target Start/End: Complemental strand, 28000762 - 28000668
Alignment:
Q  180 ccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgct-ttgttaatcatttaaaatttcgtccct 274  Q
    |||||||| |||| ||| |||||||||| | | ||||||| |||||| ||||| |||||| | ||||  |||||||||||||||||||||||||||    
T  28000762 ccttgcaattaggcggcatttaaaaatttgtctctgtaattgctaattctggc-aatttagccttgcaattgttaatcatttaaaatttcgtccct 28000668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 6517522 - 6517614
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtcc 272  Q
    ||||||||| |||| | | |||||||||| | |  |||||||||||||||||| ||||||||| |||| ||| ||||||||||||||||||||||    
T  6517522 tccttgcaattaggcgtcatttaaaaattagtctttgtaatcgctaatcctgg-caatttacc-ttgcattgtttaatcatttaaaatttcgtcc 6517614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 271
Target Start/End: Complemental strand, 7161232 - 7161119
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatc 256  Q
    |||||||||  || |||||  ||||||||| |||| | | |||||||||| | |||| ||||| ||||||||| | |||||||| |||| ||||| ||||    
T  7161232 taggcttaatgatatatttcgtccttgcaattaggcgtcatttaaaaattagtccctataatcactaatcctgac-aatttacccttgcattgtttaatc 7161134  T
Q  257 atttaaaatttcgtc 271  Q
    |||||||||||||||    
T  7161133 atttaaaatttcgtc 7161119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 11393233 - 11393163
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||| ||||||||| ||| ||| || |||||| |||||||||||||| ||| ||| |||||||||||    
T  11393233 aggcttaagtatgtatttcatctttgtaattaggggtcgtttaaaaattggtccccgtattcgctaatcct 11393163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 14196634 - 14196727
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgct-ttgttaatcatttaaaatttcgtcc 272  Q
    ||||||||| |||| | | |||||||||| | ||||||||| |||||| ||||| |||||| ||||||  |||||||||||||||||||| ||||    
T  14196634 tccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaattctggc-aatttagctttgcaattgttaatcatttaaaatttggtcc 14196727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 271
Target Start/End: Original strand, 7905262 - 7905354
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtc 271  Q
    ||||||||| |||| | | |||||||||| | || |||||||| |||||||||| |||||||| |||| || || |||||||||||||||||||    
T  7905262 tccttgcaattaggcgtcatttaaaaattagtccttgtaatcgttaatcctggc-aatttacccttgcattatttaatcatttaaaatttcgtc 7905354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 12407508 - 12407577
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||| |||||| ||| || ||  |||||||||||||| | ||||| |||||||||||    
T  12407508 ggcttaaatatgtatttcatccttacaattaaggatcgtttaaaaattggtctctgtattcgctaatcct 12407577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 271
Target Start/End: Complemental strand, 22503181 - 22503089
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtc 271  Q
    ||||||||| |||| | | |||||||||| | || |||||||||||||||||| ||||||| | |||| ||| ||||||||||||| |||||||    
T  22503181 tccttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctgg-caatttatccttgcattgtttaatcatttaaattttcgtc 22503089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 232
Target Start/End: Complemental strand, 26464627 - 26464555
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggc 232  Q
    ||||||||||||||||| |||| ||||| |||||| | |||||||| ||| ||||||| | | ||||||||||    
T  26464627 ggcttaaatatgtatttcatccctgcaattaggggtcatttaaaaaatggtccctgtatttgttaatcctggc 26464555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 274
Target Start/End: Complemental strand, 363207 - 363113
Alignment:
Q  180 ccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatcatttaaaatttcgtccct 274  Q
    |||||||| |||| ||| |||||||||| | ||||||||| ||||||||||| || |||| |  |||  ||||||||| |||||||||||||||||    
T  363207 ccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctgg-cattttaaccctgcaattgttaatcgtttaaaatttcgtccct 363113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 274
Target Start/End: Complemental strand, 20652076 - 20651961
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgttaatcat 258  Q
    |||||||||||||||||| || | ||||| || ||| |||||||||||||  ||||||| || |||||||| || ||    ||||    | |||||||||    
T  20652076 aggcttaaatatgtatttaattcctgcaattatgggtcgtttaaaaattgatccctgtattcactaatccttgcaaaccagccttgcaatcgttaatcat 20651977  T
Q  259 ttaaaatttcgtccct 274  Q
    ||||||||||||||||    
T  20651976 ttaaaatttcgtccct 20651961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 163 - 210
Target Start/End: Original strand, 22617886 - 22617933
Alignment:
Q  163 ttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattggg 210  Q
    |||||||||||||| |||||||||| |||| | |||||||||||||||    
T  22617886 ttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggg 22617933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 272
Target Start/End: Original strand, 25485991 - 25486065
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatcatttaaaatttcgtcc 272  Q
    |||||||||| | ||||||||| ||||||||||| ||||||| | ||||  |||||||||||||||||||| ||||    
T  25485991 tttaaaaattcgtccctgtaattgctaatcctgg-caatttagccttgcaattgttaatcatttaaaatttggtcc 25486065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 232
Target Start/End: Complemental strand, 28498456 - 28498381
Alignment:
Q  157 ataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggc 232  Q
    |||||||| ||||||| |||  ||| ||||| |||||  | |||||||||||| || |||||||||||||||||||    
T  28498456 ataggctttaatatgtgtttcgtccctgcaattagggctcatttaaaaattggtccttgtaatcgctaatcctggc 28498381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 21627712 - 21627782
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||| ||||||| || || ||  |||||||||||||  || |||| |||||||||||    
T  21627712 aggcttaaatatgtatttcatccttgtaattaaggatcgtttaaaaattgatccatgtattcgctaatcct 21627782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 271
Target Start/End: Complemental strand, 7905650 - 7905558
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtc 271  Q
    ||||||||| |||| | | |||| ||||| | |||| ||||||||||| |||| ||||||||| |||| ||| |||||||||| ||||||||||    
T  7905650 tccttgcaattaggtgtcatttataaatttgtccctataatcgctaattctgg-caatttacccttgcattgtttaatcatttcaaatttcgtc 7905558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 22373065 - 22373013
Alignment:
Q  180 ccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggc 232  Q
    |||||||| |||| ||| |||||||||| | ||||||||| ||||||||||||    
T  22373065 ccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggc 22373013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 3e-38; HSPs: 109)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 159 - 274
Target Start/End: Original strand, 24711110 - 24711225
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatca 257  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||| ||||||||| |||| ||| |||||||    
T  24711110 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgg-caatttaccgttgcattgtttaatca 24711208  T
Q  258 tttaaaatttcgtccct 274  Q
    |||||||||||||||||    
T  24711209 tttaaaatttcgtccct 24711225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 158 - 274
Target Start/End: Original strand, 7451832 - 7451948
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatc 256  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||| ||||||||| |||||||||  ||| ||| ||||||    
T  7451832 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctgg-caatttacccctgcattgtttaatc 7451930  T
Q  257 atttaaaatttcgtccct 274  Q
    ||||||||||||||||||    
T  7451931 atttaaaatttcgtccct 7451948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 158 - 274
Target Start/End: Complemental strand, 34765810 - 34765694
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatc 256  Q
    ||||||||||||||||||| |||||||||| |||||| ||||||||||||||  | |||||||||||||||||| |||||||||||||| ||| ||||||    
T  34765810 taggcttaaatatgtattttatccttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcctgg-caatttacctttgcattgtttaatc 34765712  T
Q  257 atttaaaatttcgtccct 274  Q
    ||||||||||||||||||    
T  34765711 atttaaaatttcgtccct 34765694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 158 - 274
Target Start/End: Complemental strand, 44967468 - 44967352
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatc 256  Q
    |||||||||||||||||||||||||||||| ||| || |||||||||||||| ||||||||||||||||||||| |||||||||  ||| ||| ||||||    
T  44967468 taggcttaaatatgtatttgatccttgcaattagaggtcgtttaaaaattggtccctgtaatcgctaatcctgg-caatttacccctgcattgtttaatc 44967370  T
Q  257 atttaaaatttcgtccct 274  Q
    ||||||||||||||||||    
T  44967369 atttaaaatttcgtccct 44967352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 158 - 274
Target Start/End: Complemental strand, 50419067 - 50418951
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatc 256  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||| |||| |||||||||||||||| |||| |||| |||| ||| ||||||    
T  50419067 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctctaatcgctaatcctgg-caatctacccttgcattgtttaatc 50418969  T
Q  257 atttaaaatttcgtccct 274  Q
    ||||||||||||||||||    
T  50418968 atttaaaatttcgtccct 50418951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 162 - 271
Target Start/End: Original strand, 37248238 - 37248347
Alignment:
Q  162 cttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcattt 260  Q
    ||||||||||||||||| |||||||| |||||| |||||||||||||| ||||||||||||||||||||| ||||||||| |||| ||| ||||||||||    
T  37248238 cttaaatatgtatttgaaccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgg-caatttacccttgcattgtttaatcattt 37248336  T
Q  261 aaaatttcgtc 271  Q
    |||||||||||    
T  37248337 aaaatttcgtc 37248347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 158 - 274
Target Start/End: Original strand, 13058035 - 13058151
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatc 256  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||| | |||||||||||||||||||  ||||||||  ||| ||| ||||||    
T  13058035 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctgg-taatttacccctgcattgtttaatc 13058133  T
Q  257 atttaaaatttcgtccct 274  Q
    ||||||||||||||||||    
T  13058134 atttaaaatttcgtccct 13058151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 159 - 271
Target Start/End: Original strand, 18831348 - 18831460
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatca 257  Q
    ||||||||||||||||||||||||| ||| |||||| |||||||||||||| |||||||||||||||||||||  |||||||| |||| ||| |||||||    
T  18831348 aggcttaaatatgtatttgatccttacaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgg-taatttacccttgcattgtttaatca 18831446  T
Q  258 tttaaaatttcgtc 271  Q
    ||||||||||||||    
T  18831447 tttaaaatttcgtc 18831460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 159 - 274
Target Start/End: Original strand, 23613308 - 23613423
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatca 257  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||| || |||||||||||||| ||| |||||||||  ||| ||| |||||||    
T  23613308 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttgg-caatttacccctgcattgtttaatca 23613406  T
Q  258 tttaaaatttcgtccct 274  Q
    |||||||||||||||||    
T  23613407 tttaaaatttcgtccct 23613423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 159 - 274
Target Start/End: Original strand, 5368946 - 5369061
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatca 257  Q
    ||||||||||||||||||||||||||||| |||||  |||||||||||||| || |||||||||||||||||| |||||||||  ||| ||| |||||||    
T  5368946 aggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccttgtaatcgctaatcctgg-caatttacccctgcattgtttaatca 5369044  T
Q  258 tttaaaatttcgtccct 274  Q
    |||||||||| ||||||    
T  5369045 tttaaaattttgtccct 5369061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 158 - 274
Target Start/End: Complemental strand, 36009244 - 36009127
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaataggggg-cgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaat 255  Q
    ||||||||||||||||||||||||||| || ||||||| |||||||||||||| ||||||||||| |||||||||  ||||||||  ||| ||| |||||    
T  36009244 taggcttaaatatgtatttgatccttgtaattagggggtcgtttaaaaattggtccctgtaatcgttaatcctgg-aaatttacccctgcattgtttaat 36009146  T
Q  256 catttaaaatttcgtccct 274  Q
    |||||||||||||||||||    
T  36009145 catttaaaatttcgtccct 36009127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 155 - 274
Target Start/End: Complemental strand, 43155929 - 43155810
Alignment:
Q  155 aaataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgtta 253  Q
    |||||||||||||||||||||||||||||  || |||||| |||||||||||||| ||||||||||| ||||||||| ||||||| |  ||| ||  |||    
T  43155929 aaataggcttaaatatgtatttgatccttataattaggggtcgtttaaaaattggtccctgtaatcgttaatcctgg-caatttatccctgcattattta 43155831  T
Q  254 atcatttaaaatttcgtccct 274  Q
    |||||||||||||||||||||    
T  43155830 atcatttaaaatttcgtccct 43155810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 157 - 274
Target Start/End: Complemental strand, 55867545 - 55867428
Alignment:
Q  157 ataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaat 255  Q
    ||||||||||||||||||||||||| ||||| |||||| |||||||||||||| || |||||||| ||||||| | |||  |||| |||| ||| |||||    
T  55867545 ataggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccatgtaatcgttaatccttg-caaactacccttgcattgtttaat 55867447  T
Q  256 catttaaaatttcgtccct 274  Q
    |||||||||||||||||||    
T  55867446 catttaaaatttcgtccct 55867428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 159 - 274
Target Start/End: Original strand, 14801735 - 14801850
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatca 257  Q
    |||||||||||||||||| |||||||||| |||| | |||||||||||||| |  |||||||||||||||| | ||||||||| |||  ||| |||||||    
T  14801735 aggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtctttgtaatcgctaatcct-gacaatttacccttgtattgtttaatca 14801833  T
Q  258 tttaaaatttcgtccct 274  Q
    |||||||||||||||||    
T  14801834 tttaaaatttcgtccct 14801850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 158 - 274
Target Start/End: Original strand, 24349672 - 24349788
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgttaatca 257  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||| ||||||||||| || || |  ||||    |  |||||||    
T  24349672 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatca 24349771  T
Q  258 tttaaaatttcgtccct 274  Q
    |||||||||||||||||    
T  24349772 tttaaaatttcgtccct 24349788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 50418665 - 50418737
Alignment:
Q  157 ataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||| |||||||    
T  50418665 ataggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcct 50418737  T

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Target: chr4; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 161 - 272
Target Start/End: Original strand, 52909254 - 52909365
Alignment:
Q  161 gcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatt 259  Q
    |||||||||||||||| ||| |||||| |||||| |||| ||||||||| | ||||||||||||||||| | ||||||||| |||| ||| |||||||||    
T  52909254 gcttaaatatgtatttcatctttgcaattaggggtcgttcaaaaattggtcactgtaatcgctaatcct-gacaatttacccttgcattgtttaatcatt 52909352  T
Q  260 taaaatttcgtcc 272  Q
    |||||||||||||    
T  52909353 taaaatttcgtcc 52909365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 274
Target Start/End: Complemental strand, 49879596 - 49879490
Alignment:
Q  168 tatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatt 266  Q
    |||||||||||||||||||| |||||| |||||||||| ||  | ||||||||||||||||| | ||||||||| |||| ||| ||||||||||||||||    
T  49879596 tatgtatttgatccttgcaattaggggtcgtttaaaaactgatctctgtaatcgctaatcct-gacaatttacccttgcattgtttaatcatttaaaatt 49879498  T
Q  267 tcgtccct 274  Q
    ||||||||    
T  49879497 tcgtccct 49879490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 37248630 - 37248564
Alignment:
Q  163 ttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||    
T  37248630 ttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 37248564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 229
Target Start/End: Original strand, 49879202 - 49879276
Alignment:
Q  155 aaataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||| ||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||| |||||||||    
T  49879202 aaataagcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaattgctaatcct 49879276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 274
Target Start/End: Original strand, 51692550 - 51692667
Alignment:
Q  157 ataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaat 255  Q
    |||||||||||||||||||| |||||||||| ||| || |||||||||||||  |  |||||||||||||||| | ||||||||| |||| ||| |||||    
T  51692550 ataggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattgatctatgtaatcgctaatcct-gacaatttacccttgcattgtttaat 51692648  T
Q  256 catttaaaatttcgtccct 274  Q
    || ||||||||||||||||    
T  51692649 cacttaaaatttcgtccct 51692667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 157 - 274
Target Start/End: Complemental strand, 10781915 - 10781798
Alignment:
Q  157 ataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgttaatc 256  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||| || |||| ||||||||||| || || |  ||||    |  ||||||    
T  10781915 ataggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcaatcattaatc 10781816  T
Q  257 atttaaaatttcgtccct 274  Q
    ||||||||||||||||||    
T  10781815 atttaaaatttcgtccct 10781798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 229
Target Start/End: Complemental strand, 51692950 - 51692878
Alignment:
Q  157 ataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||||| |||||||||| |||||| |||||||||||||| ||||||| |||||||||||    
T  51692950 ataggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcct 51692878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 156 - 274
Target Start/End: Original strand, 24411354 - 24411472
Alignment:
Q  156 aataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaa 254  Q
    ||||| ||||||||||||||| ||||| |||| ||||||  ||||||||||||| ||||||||||||||| ||| | ||||||||| |||| ||| ||||    
T  24411354 aatagacttaaatatgtatttcatcctagcaattaggggtagtttaaaaattggtccctgtaatcgctaaccct-gacaatttacccttgcattgtttaa 24411452  T
Q  255 tcatttaaaatttcgtccct 274  Q
    |||||||||  |||||||||    
T  24411453 tcatttaaagattcgtccct 24411472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 13058411 - 13058341
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||||||||||||||  ||||| |||||||||||||| ||||||| |||||||||||    
T  13058411 aggcttaaatatgtatttgatccttgcaataaggggtcgtttaaaaattggtccctgtattcgctaatcct 13058341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 271
Target Start/End: Complemental strand, 15508098 - 15507990
Alignment:
Q  162 cttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcattt 260  Q
    ||||||||||||||| |||||||||| |||||| |||||||||||| | || |||||||||||||||| | ||||||||| |||| | | ||||||||||    
T  15508098 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatt-gtccttgtaatcgctaatcct-gacaatttaccattgcatggtttaatcattt 15508001  T
Q  261 aaaatttcgtc 271  Q
    |||||||||||    
T  15508000 aaaatttcgtc 15507990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 24350861 - 24350791
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||| | |||||||||||    
T  24350861 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgcattcgctaatcct 24350791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 158 - 271
Target Start/End: Complemental strand, 37976583 - 37976470
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatc 256  Q
    ||||||||||||||||||| ||| | |||| |||||| |||||||||||||  |||||||||||||||| || | ||||||| | |||| ||| ||||||    
T  37976583 taggcttaaatatgtatttcatcatggcaattaggggtcgtttaaaaattgatccctgtaatcgctaattct-gacaatttatcattgcattgtttaatc 37976485  T
Q  257 atttaaaatttcgtc 271  Q
    |||||||||||||||    
T  37976484 atttaaaatttcgtc 37976470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 271
Target Start/End: Complemental strand, 54087121 - 54087012
Alignment:
Q  162 cttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcattt 260  Q
    ||||||||||||||| ||| ||| || |||||| |||||||||||||| ||||||||||| ||||| | | ||||||||| |||| ||| ||||||||||    
T  54087121 cttaaatatgtatttcatcattgtaattaggggtcgtttaaaaattggtccctgtaatcgttaatcat-gacaatttacccttgcattgtttaatcattt 54087023  T
Q  261 aaaatttcgtc 271  Q
    |||||||||||    
T  54087022 aaaatttcgtc 54087012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 7452231 - 7452162
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||| | ||||| |||||||||||    
T  7452231 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatcct 7452162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 274
Target Start/End: Complemental strand, 17356348 - 17356236
Alignment:
Q  162 cttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcattt 260  Q
    ||||||||||||||| |||||| ||| || ||| |||||||||||||| ||||||| ||||||||| ||| ||||||||  |||| ||| || |||||||    
T  17356348 cttaaatatgtatttcatccttccaattacgggtcgtttaaaaattggtccctgtattcgctaatcttgg-caatttactcttgcattgtttgatcattt 17356250  T
Q  261 aaaatttcgtccct 274  Q
    ||||||||||||||    
T  17356249 aaaatttcgtccct 17356236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 23613706 - 23613637
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||  ||||||| |||||||||||    
T  23613706 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattgatccctgtattcgctaatcct 23613637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 179 - 274
Target Start/End: Original strand, 27934551 - 27934646
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatcatttaaaatttcgtccct 274  Q
    ||||||||| |||||| |||||||||||| | ||||||||| ||||||||||| ||||||| | ||||  |||||||||||||||||||||||||||    
T  27934551 tccttgcaattaggggtcgtttaaaaatttgtccctgtaattgctaatcctgg-caatttagccttgcaattgttaatcatttaaaatttcgtccct 27934646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 227
Target Start/End: Complemental strand, 18831745 - 18831678
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatc 227  Q
    ||||||||||||||||| |||||||||| |||||| |||||||||||||| ||||||| |||||||||    
T  18831745 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatc 18831678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 24711510 - 24711439
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||| || ||| |||| |||||||    
T  24711510 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgtcatcgttaatcct 24711439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 44967071 - 44967138
Alignment:
Q  162 cttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||| | ||||| |||||||||||    
T  44967071 cttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatcct 44967138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 179 - 272
Target Start/End: Complemental strand, 10408296 - 10408203
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtcc 272  Q
    ||||||||| |||| | | |||||||||| | ||||||||||||||||||||| ||||||||| |||| ||| ||||||||||||||||||||||    
T  10408296 tccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgg-caatttacccttgcattgtttaatcatttaaaatttcgtcc 10408203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 10780712 - 10780782
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||| || || | |||||||||||    
T  10780712 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgcattcgctaatcct 10780782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 10974321 - 10974391
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||| || || | |||||||||||    
T  10974321 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgcattcgctaatcct 10974391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 43155532 - 43155598
Alignment:
Q  163 ttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||||||||||| || ||| |||||||||||||| ||||||| |||||||||||    
T  43155532 ttaaatatgtatttgatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatcct 43155598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 159 - 271
Target Start/End: Complemental strand, 11448158 - 11448046
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatca 257  Q
    ||||||||||||||||||  ||| || || |||||| |||||||||||||  | ||||||||||||||||| | ||| ||||| |||| ||| |||||||    
T  11448158 aggcttaaatatgtatttcgtccctgtaattaggggtcgtttaaaaattgatctctgtaatcgctaatccttg-caaattacccttgcattgtttaatca 11448060  T
Q  258 tttaaaatttcgtc 271  Q
    ||||||||||||||    
T  11448059 tttaaaatttcgtc 11448046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 159 - 271
Target Start/End: Complemental strand, 35028427 - 35028315
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatca 257  Q
    |||||||||||||||||| |||||||||| ||||||   |||||||||||| || | |  ||||||||||| | ||||||||| |||| ||| |||||||    
T  35028427 aggcttaaatatgtatttcatccttgcaattaggggtattttaaaaattggtccatatgttcgctaatccttg-caatttacccttgcattgtttaatca 35028329  T
Q  258 tttaaaatttcgtc 271  Q
    ||||||||||||||    
T  35028328 tttaaaatttcgtc 35028315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 36008842 - 36008911
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatc 227  Q
    ||||||||||||||||||||||||||| || |||||  |||||||||||||| ||||||| |||||||||    
T  36008842 taggcttaaatatgtatttgatccttgtaattagggatcgtttaaaaattggtccctgtattcgctaatc 36008911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 154 - 274
Target Start/End: Complemental strand, 53129940 - 53129820
Alignment:
Q  154 taaataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-tt 252  Q
    |||| |||||||||||||||||| ||||||||||  ||||| |||||||||||||  ||  ||||||||||||||| | ||||||||| | || ||| ||    
T  53129940 taaaaaggcttaaatatgtatttcatccttgcaatcaggggtcgtttaaaaattgatcctcgtaatcgctaatccttg-caatttaccctcgcattgttt 53129842  T
Q  253 aatcatttaaaatttcgtccct 274  Q
     ||| |||||||||||||||||    
T  53129841 catcgtttaaaatttcgtccct 53129820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 162 - 274
Target Start/End: Original strand, 53701814 - 53701926
Alignment:
Q  162 cttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcattt 260  Q
    ||||||||| ||||| |||||||||| |||||| |||||||||||||  | |||||||| |||||||| | ||||||| | |||| ||| ||||||||||    
T  53701814 cttaaatatctatttcatccttgcaattaggggtcgtttaaaaattgatctctgtaatctctaatcct-gacaatttatccttgcattgtttaatcattt 53701912  T
Q  261 aaaatttcgtccct 274  Q
    |||||||| |||||    
T  53701913 aaaatttcttccct 53701926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 274
Target Start/End: Complemental strand, 9400897 - 9400802
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatcatttaaaatttcgtccct 274  Q
    ||||||||| |||||| |||||||||||| | ||||||||| ||||||||||| ||||||| | ||||  ||||||||||||||||||||| |||||    
T  9400897 tccttgcaattaggggtcgtttaaaaattcgtccctgtaattgctaatcctgg-caatttagccttgcaattgttaatcatttaaaatttcatccct 9400802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 16006219 - 16006152
Alignment:
Q  162 cttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||| ||||||| |||||| |||||||||||||| | ||||| |||||||||||    
T  16006219 cttaaatatgtatttgattcttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatcct 16006152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 24411778 - 24411707
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||||| |||||||||| || ||| |||||||||||||  ||||||| |||||||||||    
T  24411778 taggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattgatccctgtattcgctaatcct 24411707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 198 - 272
Target Start/End: Original strand, 27068948 - 27069022
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtcc 272  Q
    |||||||||| | ||||||||||||||||||||| ||||||||| |||| ||| ||||||||||||||||||||||    
T  27068948 tttaaaaattagtccctgtaatcgctaatcctgg-caatttacccttgcattgtttaatcatttaaaatttcgtcc 27069022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 35027996 - 35028067
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||| |||||||||||||| |||||||||| |||||| ||||||||||||||  |||||| |||||||||||    
T  35027996 taggtttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttcctgtattcgctaatcct 35028067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 1179229 - 1179159
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||| ||| |||||| |||||| |||||||||||||| || |||| |||||||||||    
T  1179229 aggcttaaatatgtattttatctttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatcct 1179159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 274
Target Start/End: Original strand, 16005843 - 16005952
Alignment:
Q  165 aaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaa 263  Q
    |||||||||||||||||||  || |||||| ||||||||||||   |||||||||||||||| |||| ||||||| |  ||  ||| |||||||||||||    
T  16005843 aaatatgtatttgatccttataattaggggtcgtttaaaaattaatccctgtaatcgctaattctgg-caatttatccatgtattgtttaatcatttaaa 16005941  T
Q  264 atttcgtccct 274  Q
    |||||||||||    
T  16005942 atttcgtccct 16005952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 272
Target Start/End: Complemental strand, 39539348 - 39539234
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgttaatca 257  Q
    ||||||||||||||||||| |||||||||| || ||| |||||||||||||| |  |||||||| |||| || || ||||  ||||   ||  |||||||    
T  39539348 taggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtcaatgtaatcgttaattcttgcaaattagccttgcattctttaatca 39539249  T
Q  258 tttaaaatttcgtcc 272  Q
    |||||||||||||||    
T  39539248 tttaaaatttcgtcc 39539234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 46661343 - 46661285
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgta 217  Q
    |||||||||||||||||| |||||||||| |||||| |||||||||||||| |||||||    
T  46661343 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgta 46661285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 48528484 - 48528534
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgg 209  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  48528484 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattgg 48528534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 54086698 - 54086764
Alignment:
Q  163 ttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||| |||||||||| |||||| |||||||||||||| | ||||| |||||||||||    
T  54086698 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatcct 54086764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 54858579 - 54858672
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtcc 272  Q
    ||||||||| |||| | | |||||||||| | ||||||||||||||||||| | ||||||||| |||| ||| ||||||||||||||||||||||    
T  54858579 tccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcct-gacaatttacccttgcattgtttaatcatttaaaatttcgtcc 54858672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 147319 - 147388
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||| |||| | ||| |||||| |||||||||||||| ||||||| |||||||||||    
T  147319 ggcttaaatatgtatttcatccctacaattaggggtcgtttaaaaattggtccctgtattcgctaatcct 147388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 179 - 271
Target Start/End: Original strand, 3032601 - 3032693
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtc 271  Q
    ||||||||| |||| | | |||||||||| | || |||||||||||||||||| ||||||||| |||| ||| |||||||||||||||||||||    
T  3032601 tccttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctgg-caatttacccttgcattgtttaatcatttaaaatttcgtc 3032693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 154 - 274
Target Start/End: Original strand, 16605596 - 16605716
Alignment:
Q  154 taaataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-tt 252  Q
    |||||||||||||  |||| |||  ||||||||| |||| | | |||||||||| | |||||||||||  || ||| ||||||||||| |||| ||| ||    
T  16605596 taaataggcttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgtcaaacct-gccaatttacccttgcattgatt 16605694  T
Q  253 aatcatttaaaatttcgtccct 274  Q
    ||||||||||||||||||||||    
T  16605695 aatcatttaaaatttcgtccct 16605716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 179 - 271
Target Start/End: Complemental strand, 27069317 - 27069225
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtc 271  Q
    ||||||||| |||| | | |||||||||| | ||||||||| ||||||||||| ||||||||| |||| ||| |||||||||||||||||||||    
T  27069317 tccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcctgg-caatttacccttgcattgtttaatcatttaaaatttcgtc 27069225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 229
Target Start/End: Original strand, 34765376 - 34765449
Alignment:
Q  156 aataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||||||| |||||||||| || ||| ||||||||||| || || |||| |||||||||||    
T  34765376 aataggcttaaatatgtattttatccttgcaattaagggtcgtttaaaaatcggtccttgtattcgctaatcct 34765449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 35508670 - 35508558
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatc 256  Q
    ||||||||||||||||||| ||| |||||| |||||| ||||||||||||   || |||||||| |||| ||   ||||||||| |||| ||| ||||||    
T  35508670 taggcttaaatatgtattttatcattgcaattaggggtcgtttaaaaattaatccttgtaatcgttaattct-aacaatttacccttgcattgtttaatc 35508572  T
Q  257 atttaaaatttcgt 270  Q
    ||||||||||||||    
T  35508571 atttaaaatttcgt 35508558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 179 - 271
Target Start/End: Original strand, 45463092 - 45463184
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtc 271  Q
    ||||||||| |||| | | |||||||||| | | ||||||||||||||||||| ||||||||| |||| ||| |||||||||||||||||||||    
T  45463092 tccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctgg-caatttacccttgcattgtttaatcatttaaaatttcgtc 45463184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 161 - 229
Target Start/End: Original strand, 15507674 - 15507742
Alignment:
Q  161 gcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||| |||||||||| || ||| |||||||||||||| |||| || |||||||||||    
T  15507674 gcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctatattcgctaatcct 15507742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 148185 - 148114
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||||| |||| ||||| |||||| |||||||||||||| |||| || ||| |||||||    
T  148185 taggcttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggtccctttattcgttaatcct 148114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 10407908 - 10408001
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtcc 272  Q
    ||||||||| |||| | | ||||||||||   ||||||||||||||||||| | ||||||||| |||| ||| ||||||||||||||||||||||    
T  10407908 tccttgcaattaggagtcatttaaaaattactccctgtaatcgctaatcct-gacaatttacccttgcattgtttaatcatttaaaatttcgtcc 10408001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 237
Target Start/End: Original strand, 40387466 - 40387544
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatt 237  Q
    |||||| ||||||| ||| |||| ||||| |||||| | |||||||||||| ||||||| |||||||||||||| ||||    
T  40387466 aggctttaatatgtgtttcatccctgcaattaggggccatttaaaaattggtccctgtattcgctaatcctggcaaatt 40387544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 272
Target Start/End: Complemental strand, 54858967 - 54858874
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtcc 272  Q
    ||||||||| |||| | | |||||||||| | || |||||||| |||||||||| |||||||| |||| ||||| ||||||||||||||||||||    
T  54858967 tccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctggc-aatttacccttgcattgtttaatcatttaaaatttcgtcc 54858874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 5369295 - 5369226
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||||||||||  || |||||| |||||||||||||| ||||| | ||| |||||||    
T  5369295 ggcttaaatatgtatttgatccttataagtaggggtcgtttaaaaattggtccctgcattcgttaatcct 5369226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 271
Target Start/End: Original strand, 50750910 - 50750998
Alignment:
Q  183 tgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtc 271  Q
    ||||| |||| | |||||||||||| | |||||||||||||||||||||| |||| ||| |||| ||| |||||||||||||| ||||||    
T  50750910 tgcaattaggcgtcgtttaaaaattcgtccctgtaatcgctaatcctggcaaattaacc-ttgcattgtttaatcatttaaaaattcgtc 50750998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 17355924 - 17355992
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatc 227  Q
    |||||||||||||||||| |||||||||| |||| | ||||||||||||||   ||||| |||||||||    
T  17355924 aggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggttgctgtattcgctaatc 17355992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 274
Target Start/End: Complemental strand, 33247651 - 33247556
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatcatttaaaatttcgtccct 274  Q
    ||||||||| |||||  |||||||||||  | ||||||||| ||||||||||| ||||||| | ||||  ||||||||||||||||||||| |||||    
T  33247651 tccttgcaattagggatcgtttaaaaatccgtccctgtaattgctaatcctgg-caatttagccttgcaattgttaatcatttaaaatttcatccct 33247556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 272
Target Start/End: Original strand, 22717977 - 22718051
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtcc 272  Q
    |||||||||| | || ||||||||||||||||| | ||| |||| |||||||||| ||||||||||||||||||||    
T  22717977 tttaaaaattagtccatgtaatcgctaatcctgac-aatatacccttgctttgtttaatcatttaaaatttcgtcc 22718051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 272
Target Start/End: Complemental strand, 22987239 - 22987165
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtcc 272  Q
    |||||||||| | || ||||||||||||||||| | ||| |||| |||||||||| ||||||||||||||||||||    
T  22987239 tttaaaaattagtccatgtaatcgctaatcctgac-aatatacccttgctttgtttaatcatttaaaatttcgtcc 22987165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 202 - 272
Target Start/End: Complemental strand, 27149380 - 27149310
Alignment:
Q  202 aaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtcc 272  Q
    |||||| | ||||||||| |||||||||||| |||||||| |||| ||||| ||||||||||||||||||||    
T  27149380 aaaattagtccctgtaattgctaatcctggc-aatttacccttgcattgtttaatcatttaaaatttcgtcc 27149310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 272
Target Start/End: Original strand, 27891622 - 27891696
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtcc 272  Q
    |||||||||| | ||||||||||||||||  |||| |||||||| |||| ||||| ||||||||||||||||||||    
T  27891622 tttaaaaattagtccctgtaatcgctaattttggc-aatttacccttgcattgtttaatcatttaaaatttcgtcc 27891696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 274
Target Start/End: Complemental strand, 42738408 - 42738314
Alignment:
Q  180 ccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatcatttaaaatttcgtccct 274  Q
    |||||||| |||| ||| |||||||||| | ||||||||| ||||||||||| || |||| |  |||  |||||||||||||||||||||||||||    
T  42738408 ccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctgg-cattttaaccctgcaattgttaatcatttaaaatttcgtccct 42738314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 9400538 - 9400631
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatcatttaaaatttcgtcc 272  Q
    ||||||||| |||| | | |||||||||| | ||||||||| ||||||||||| ||||||| | ||||  |||||||||||||||||||| ||||    
T  9400538 tccttgcaattaggtgtcatttaaaaattcgtccctgtaattgctaatcctgg-caatttagccttgcaattgttaatcatttaaaatttggtcc 9400631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 11108265 - 11108199
Alignment:
Q  163 ttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||| |||||||||| |||||  |||||||||||||  || |||| |||||||||||    
T  11108265 ttaaatatgtatttcatccttgcaattagggatcgtttaaaaattgatccttgtattcgctaatcct 11108199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 271
Target Start/End: Complemental strand, 39667164 - 39667091
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtc 271  Q
    |||||||||||| ||||||||||| |||||||||  || ||||| |||| ||| |||||||||||||||||||||    
T  39667164 tttaaaaattggtccctgtaatcgttaatcctgg-taaattacccttgcattgtttaatcatttaaaatttcgtc 39667091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 237
Target Start/End: Complemental strand, 40388535 - 40388457
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatt 237  Q
    |||||| ||||||| ||| |||| ||||| || ||| | |||||||||||| |||| ||||||||||||||||| ||||    
T  40388535 aggctttaatatgtgtttcatccctgcaattaagggccatttaaaaattggtccctctaatcgctaatcctggcaaatt 40388457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 229
Target Start/End: Complemental strand, 52909686 - 52909612
Alignment:
Q  155 aaataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||||||| |||||||||| || ||  | |||||||||||| |  |||| |||||||||||    
T  52909686 aaataggcttaaatatgtatttcatccttgcaattatggatcatttaaaaattggtctatgtattcgctaatcct 52909612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 271
Target Start/End: Original strand, 11523968 - 11524060
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtc 271  Q
    ||||||||| |||| | | |||||||||| | | ||||||||| |||||||||| ||| |||| |||| ||||| |||||||||||||||||||    
T  11523968 tccttgcaattaggcgtcatttaaaaattagtctctgtaatcgttaatcctggc-aatatacccttgcattgtttaatcatttaaaatttcgtc 11524060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 274
Target Start/End: Original strand, 41582444 - 41582561
Alignment:
Q  157 ataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgttaatc 256  Q
    |||||||| ||||||| ||| |||| |||||  ||||| | |||||||||||| |||| |||||| |||||||||| ||||  || |      |||||||    
T  41582444 ataggctttaatatgtgtttcatccctgcaatcaggggtcatttaaaaattggtccctctaatcgttaatcctggcaaattgcccctgcaaaagttaatc 41582543  T
Q  257 atttaaaatttcgtccct 274  Q
    ||||||||||||||||||    
T  41582544 atttaaaatttcgtccct 41582561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 267
Target Start/End: Complemental strand, 45463480 - 45463392
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaattt 267  Q
    ||||||||| |||| | | |||||||||| | ||||||||| ||||||||||| |||| |||| |||| ||| |||||||||||||||||    
T  45463480 tccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcctgg-caatctacccttgcattgtttaatcatttaaaattt 45463392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 274
Target Start/End: Complemental strand, 54435527 - 54435411
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatc 256  Q
    |||||||||||||||||||  | ||||||| |||| | |||||||||||||  || ||||||||  |||||| | ||| ||| | |||| |||| ||||     
T  54435527 taggcttaaatatgtatttcgtgcttgcaattaggtgtcgtttaaaaattgatccatgtaatcgtcaatccttg-caaattagcattgcatttgataatt 54435429  T
Q  257 atttaaaatttcgtccct 274  Q
    ||||||||||||||||||    
T  54435428 atttaaaatttcgtccct 54435411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 274
Target Start/End: Original strand, 22566818 - 22566913
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgct-ttgttaatcatttaaaatttcgtccct 274  Q
    |||||| || |||||  |||||||||||| |  |||||||| |||||||||||| |||||| | ||||  ||||||||||||||||||||| |||||    
T  22566818 tccttgtaattagggatcgtttaaaaattcgttcctgtaattgctaatcctggc-aatttagccttgcaattgttaatcatttaaaatttcatccct 22566913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 37976156 - 37976220
Alignment:
Q  163 ttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatc 227  Q
    |||||||||||||| |||||||||| ||| || |||||||||| |||  |||||| |||||||||    
T  37976156 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaactggttcctgtattcgctaatc 37976220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 272
Target Start/End: Complemental strand, 50504254 - 50504139
Alignment:
Q  157 ataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aat 255  Q
    ||||||||||  |||| |||  |||||| || |||| | | |||||||||| | | ||||||||| |||||| ||| |||||||| |||| ||||| |||    
T  50504254 ataggcttaatgatgtgtttcgtccttgtaattaggcgtcatttaaaaattagtctctgtaatcgttaatccaggc-aatttacccttgcattgtttaat 50504156  T
Q  256 catttaaaatttcgtcc 272  Q
    |||||||||||||||||    
T  50504155 catttaaaatttcgtcc 50504139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 268
Target Start/End: Complemental strand, 5818163 - 5818093
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttc 268  Q
    |||||||||| | ||||||||||| ||||||| | ||||||||| |||| ||| ||||||||||||||||||    
T  5818163 tttaaaaattagtccctgtaatcgttaatcct-gtcaatttacccttgcattgtttaatcatttaaaatttc 5818093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 272
Target Start/End: Original strand, 52573266 - 52573340
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtcc 272  Q
    |||||||||| |  |||||||||||||||||||| ||||||||  || | ||| ||||||||||||||||||||||    
T  52573266 tttaaaaattagtacctgtaatcgctaatcctgg-caatttactcttacattgtttaatcatttaaaatttcgtcc 52573340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 1178056 - 1178106
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgg 209  Q
    |||||||||||||||||| ||||||| || ||| || ||||||||||||||    
T  1178056 aggcttaaatatgtatttcatccttgtaattagaggtcgtttaaaaattgg 1178106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 226
Target Start/End: Complemental strand, 14802163 - 14802097
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaat 226  Q
    ||||||||||| ||||| |||||||||| ||| |  |||||||||||||| || |||| ||||||||    
T  14802163 ggcttaaatatatatttcatccttgcaattagagatcgtttaaaaattggtccttgtattcgctaat 14802097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 263
Target Start/End: Original strand, 33247292 - 33247377
Alignment:
Q  178 atccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatcatttaaa 263  Q
    |||||||||| |||| | | |||||||||| | ||||||||| ||||||||||| ||||||| | ||||  ||||||||||||||||    
T  33247292 atccttgcaattaggtgtcatttaaaaattcgtccctgtaattgctaatcctgg-caatttagccttgcaattgttaatcatttaaa 33247377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 274
Target Start/End: Complemental strand, 41583663 - 41583545
Alignment:
Q  156 aataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgttaat 255  Q
    ||||||||| ||||||| ||| |||| ||||| |||||| | |||||||||||    ||||| |||||||||||||| ||||  || |      ||||||    
T  41583663 aataggctttaatatgtgtttcatccctgcaattaggggtcatttaaaaattgatttctgtattcgctaatcctggcaaattgcccctgcaaaagttaat 41583564  T
Q  256 catttaaaatttcgtccct 274  Q
    |||||||||||||||||||    
T  41583563 catttaaaatttcgtccct 41583545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 272
Target Start/End: Complemental strand, 52573635 - 52573542
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtcc 272  Q
    ||||||||| |||| | | |||||||||| | || ||||||| |||||||| || |||||||| |||| ||||| |||||||||||||| |||||    
T  52573635 tccttgcaattaggcgtcatttaaaaattagtccatgtaatcactaatcctagc-aatttaccattgcattgtttaatcatttaaaattccgtcc 52573542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 192
Target Start/End: Original strand, 54713602 - 54713648
Alignment:
Q  146 tgtaaatataaataggcttaaatatgtatttgatccttgcaaatagg 192  Q
    |||||||| ||| |||||||||||||||||| |||||||||| ||||    
T  54713602 tgtaaataaaaaaaggcttaaatatgtatttcatccttgcaattagg 54713648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 272
Target Start/End: Original strand, 9144786 - 9144878
Alignment:
Q  180 ccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatcatttaaaatttcgtcc 272  Q
    |||||||| |||| ||| |||||||||| | ||||||||| ||||||||||| || |||| |  |||  |||||||||||||||||||| ||||    
T  9144786 ccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctgg-cattttaaccctgcaattgttaatcatttaaaatttggtcc 9144878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 271
Target Start/End: Complemental strand, 39701316 - 39701224
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtc 271  Q
    ||||||||| |||| | | |||||||||| | |  |||||||| ||||| || | ||||||||||||| ||||| |||||||||||||||||||    
T  39701316 tccttgcaattaggcgtcatttaaaaattagtctatgtaatcgttaatcttgac-aatttacctttgcattgtttaatcatttaaaatttcgtc 39701224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 274
Target Start/End: Complemental strand, 50751927 - 50751812
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatc 256  Q
    |||||||||  |||| ||| | || ||||| |||| | |||||||||||| | || ||||||||||||||||| | |||| ||||| || ||||| ||||    
T  50751927 taggcttaatgatgtgtttcacccctgcaattaggcgtcgtttaaaaattcgtcc-tgtaatcgctaatcctgacaaattaacctt-gcattgtttaatc 50751830  T
Q  257 atttaaaatttcgtccct 274  Q
    |||||||| |||||||||    
T  50751829 atttaaaaattcgtccct 50751812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 55866111 - 55866160
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgg 209  Q
    |||||||||||||||||  ||| ||||| |||||| ||||||||||||||    
T  55866111 ggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaattgg 55866160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 274
Target Start/End: Complemental strand, 4983104 - 4983009
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgct-ttgttaatcatttaaaatttcgtccct 274  Q
    ||||||||| |||| | ||||||||||||   || |||||| ||||||||| || |||||| | ||||  || ||||||||||||||||||||||||    
T  4983104 tccttgcaattaggcgtcgtttaaaaattcatccttgtaattgctaatcctcgc-aatttagccttgcaattattaatcatttaaaatttcgtccct 4983009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 32950519 - 32950467
Alignment:
Q  180 ccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggc 232  Q
    |||||||| |||| ||| |||||||||| | ||||||||| ||||||||||||    
T  32950519 ccttgcaattaggtggcatttaaaaattcgtccctgtaattgctaatcctggc 32950467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 34837094 - 34837146
Alignment:
Q  180 ccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggc 232  Q
    |||||||| |||| ||| |||||||||| | ||||||||| ||||||||||||    
T  34837094 ccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggc 34837146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #106
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 38012190 - 38012242
Alignment:
Q  180 ccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggc 232  Q
    |||||||| |||| ||| |||||||||| | ||||||||| ||||||||||||    
T  38012190 ccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggc 38012242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #107
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 38012547 - 38012495
Alignment:
Q  180 ccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggc 232  Q
    |||||||| |||| ||| |||||||||| | ||||||||| ||||||||||||    
T  38012547 ccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggc 38012495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #108
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 143
Target Start/End: Original strand, 38377888 - 38377956
Alignment:
Q  76 ttataagaatagttcttattttaacaacttttta-aaaatatgaatactattattccttcaaaatagtc 143  Q
    ||||||||||||| | |||||||| ||||||||| |||| ||||| ||| ||| |||| ||||||||||    
T  38377888 ttataagaatagtccctattttaaaaactttttataaaaaatgaacacttttagtcctccaaaatagtc 38377956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #109
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 51203629 - 51203681
Alignment:
Q  180 ccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggc 232  Q
    |||||||| |||| ||| |||||||||| | ||||||||| ||||||||||||    
T  51203629 ccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggc 51203681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 5e-37; HSPs: 78)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 157 - 274
Target Start/End: Original strand, 2796176 - 2796293
Alignment:
Q  157 ataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaat 255  Q
    ||||||||||||||||||||||||||||||| |||||| | |||||||||||| ||||||||||||||||||||| ||||||||| |||| ||| |||||    
T  2796176 ataggcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcctgg-caatttacccttgcattgtttaat 2796274  T
Q  256 catttaaaatttcgtccct 274  Q
    |||||||||||||||||||    
T  2796275 catttaaaatttcgtccct 2796293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 160 - 274
Target Start/End: Complemental strand, 9294386 - 9294272
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcat 258  Q
    ||||||||||||||||| |||||||||| |||||| |||||||||||||| |||| |||||||||||||||| ||||||||| |||| ||| ||||||||    
T  9294386 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatcctgg-caatttacccttgcattgtttaatcat 9294288  T
Q  259 ttaaaatttcgtccct 274  Q
    ||||||||||||||||    
T  9294287 ttaaaatttcgtccct 9294272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 159 - 271
Target Start/End: Complemental strand, 19741321 - 19741209
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatca 257  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||| ||| ||||||||| |||  ||| |||||||    
T  19741321 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcttgg-caatttacccttgtattgtttaatca 19741223  T
Q  258 tttaaaatttcgtc 271  Q
    ||||||||||||||    
T  19741222 tttaaaatttcgtc 19741209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 158 - 274
Target Start/End: Complemental strand, 23458409 - 23458293
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatc 256  Q
    ||||||||||||||||||| |||||||||| || ||| |||||||||||||| | ||||||||||||||||| | ||||||||| |||| ||| ||||||    
T  23458409 taggcttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggtctctgtaatcgctaatccttg-caatttacccttgcattgtttaatc 23458311  T
Q  257 atttaaaatttcgtccct 274  Q
    ||||||||||||||||||    
T  23458310 atttaaaatttcgtccct 23458293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 157 - 274
Target Start/End: Original strand, 42342788 - 42342905
Alignment:
Q  157 ataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaat 255  Q
    |||||||||||||||||||| |||||| ||| |||||| |||||||||||||| || |||||| |||| |||||| ||||||||| |||| ||| |||||    
T  42342788 ataggcttaaatatgtatttcatccttacaattaggggtcgtttaaaaattggtccatgtaattgctagtcctgg-caatttacccttgcattgtttaat 42342886  T
Q  256 catttaaaatttcgtccct 274  Q
    |||||||||||||||||||    
T  42342887 catttaaaatttcgtccct 42342905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 161 - 274
Target Start/End: Complemental strand, 51994313 - 51994200
Alignment:
Q  161 gcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatt 259  Q
    ||||||||||||||||||||||||||| |||||  |||||||||||||| || ||||||||||||| |||| |||||||||  ||| ||| |||||||||    
T  51994313 gcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccttgtaatcgctaattctgg-caatttacccctgcattgtttaatcatt 51994215  T
Q  260 taaaatttcgtccct 274  Q
    |||||||||||||||    
T  51994214 taaaatttcgtccct 51994200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 158 - 274
Target Start/End: Complemental strand, 33689809 - 33689693
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatc 256  Q
    ||||||||||||||||||| ||| |||||| |||||| ||||||||||||||  | |||||||||||||||||| ||||||||| |||| ||  ||||||    
T  33689809 taggcttaaatatgtatttcatctttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcctgg-caatttacccttgcattatttaatc 33689711  T
Q  257 atttaaaatttcgtccct 274  Q
    ||||||||||||||||||    
T  33689710 atttaaaatttcgtccct 33689693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 157 - 274
Target Start/End: Complemental strand, 40033887 - 40033770
Alignment:
Q  157 ataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaat 255  Q
    |||||||||||||||||||| |||||||||| |||||| ||||||||||||||   || |||| ||||||||||| ||||||||| |||| ||| |||||    
T  40033887 ataggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtttctataattgctaatcctgg-caatttacccttgcattgtttaat 40033789  T
Q  256 catttaaaatttcgtccct 274  Q
    |||||||||||| ||||||    
T  40033788 catttaaaattttgtccct 40033770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 160 - 274
Target Start/End: Original strand, 40758147 - 40758258
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcat 258  Q
    ||||||||||||||||| |||||||||| |||||| |||||||||||||| || |||||||||||||||||  |||||||||   || ||| ||||||||    
T  40758147 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcctg--caatttacc--cgcattgtttaatcat 40758242  T
Q  259 ttaaaatttcgtccct 274  Q
    ||||||||||||||||    
T  40758243 ttaaaatttcgtccct 40758258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 163 - 274
Target Start/End: Original strand, 46474818 - 46474929
Alignment:
Q  163 ttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcattta 261  Q
    |||||||||||||| ||| |||||| |||||| |||||||||||||| | ||||||||||||||| ||| ||||||||| |||| ||| |||||||||||    
T  46474818 ttaaatatgtatttcatctttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcttgg-caatttaccattgcattgtttaatcattta 46474916  T
Q  262 aaatttcgtccct 274  Q
    |||||| ||||||    
T  46474917 aaattttgtccct 46474929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 160 - 231
Target Start/End: Complemental strand, 34142646 - 34142575
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctgg 231  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||| |||| ||||    
T  34142646 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatactgg 34142575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 160 - 274
Target Start/End: Complemental strand, 55052675 - 55052562
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcat 258  Q
    ||||||||||||||||||||||||| || || ||||  |||||||||||| || |||||||| ||||| ||| |||||||||| ||| ||| ||||||||    
T  55052675 ggcttaaatatgtatttgatccttgtaatta-ggggtttttaaaaattggtccatgtaatcgttaatcatgg-caatttacctctgcattgtttaatcat 55052578  T
Q  259 ttaaaatttcgtccct 274  Q
    ||||||||||||||||    
T  55052577 ttaaaatttcgtccct 55052562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 51993961 - 51994033
Alignment:
Q  157 ataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||||||||| |||||| ||| || |||||||||||||| ||||||| |||||||||||    
T  51993961 ataggcttaaatatgtatttgatctttgcaattagaggtcgtttaaaaattggtccctgtattcgctaatcct 51994033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 19740921 - 19740992
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||||||| | ||||| |||||  |||||||||||||| |||||||||||||||||||    
T  19740921 taggcttaaatatgtatttgattcatgcaattagggatcgtttaaaaattggtccctgtaatcgctaatcct 19740992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 36418128 - 36418047
Alignment:
Q  148 taaatataaataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||| |||||| ||||||||||||||||| ||||||| || |||||| ||||||||||||||  |||||| |||||||||||    
T  36418128 taaaaataaattggcttaaatatgtatttcatccttgtaattaggggtcgtttaaaaattggttcctgtattcgctaatcct 36418047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 159 - 271
Target Start/End: Original strand, 43384282 - 43384394
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatca 257  Q
    ||||| |||||||||||  ||| |||||| || ||  | |||||||||||| ||||||||||||||||||| | ||||||||| |||| ||| |||||||    
T  43384282 aggctgaaatatgtattccatctttgcaattacggatcctttaaaaattggtccctgtaatcgctaatcct-gacaatttacccttgcattgtttaatca 43384380  T
Q  258 tttaaaatttcgtc 271  Q
    ||||||||||||||    
T  43384381 tttaaaatttcgtc 43384394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 274
Target Start/End: Original strand, 9367737 - 9367855
Alignment:
Q  156 aataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgttaat 255  Q
    ||||||||||||||||||||| |||| | ||| |||||| |||||||||| ||| | ||||| ||||||||||| || || |  ||||    || |||||    
T  9367737 aataggcttaaatatgtatttaatccctacaattaggggtcgtttaaaaaatggtctctgtattcgctaatccttgcaaactagccttgcaattattaat 9367836  T
Q  256 catttaaaatttcgtccct 274  Q
    |||||||||||||||||||    
T  9367837 catttaaaatttcgtccct 9367855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 272
Target Start/End: Complemental strand, 29118945 - 29118852
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtcc 272  Q
    ||||||||| |||| | | |||||||||| | | ||||||||||||||||||| ||||||||| |||| ||| ||||||||||||||||||||||    
T  29118945 tccttgcaattaggcgtcatttaaaaattagtcactgtaatcgctaatcctgg-caatttaccattgcattgtttaatcatttaaaatttcgtcc 29118852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 35643870 - 35643963
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtcc 272  Q
    ||||||||| |||| | | |||||||||| | ||||||||||||||||||||| |||||||||  ||| ||| ||||||||||||||||||||||    
T  35643870 tccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgg-caatttacccgtgcattgtttaatcatttaaaatttcgtcc 35643963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 53856486 - 53856416
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||||||||| |||||||||||| || ||||||||||| || |||| || ||||||||    
T  53856486 aggcttaaatatgtatttgatccctgcaaataggggtcgcttaaaaattggtccttgtattcactaatcct 53856416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 3850555 - 3850486
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||| |||| ||||| |||||| |||||||||||||| ||||||| ||| |||||||    
T  3850555 ggcttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggtccctgtattcgataatcct 3850486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 271
Target Start/End: Original strand, 41558006 - 41558119
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgttaatca 257  Q
    ||||||||||||||||||| || ||||||| || ||| ||||||||||||||  | |||| ||||||||||| ||  ||| |||||    || |||||||    
T  41558006 taggcttaaatatgtatttcattcttgcaattatgggtcgtttaaaaattggtacttgtattcgctaatccttgcacattaaccttgcaattattaatca 41558105  T
Q  258 tttaaaatttcgtc 271  Q
    ||||||||||||||    
T  41558106 tttaaaatttcgtc 41558119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 274
Target Start/End: Complemental strand, 36314676 - 36314581
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgct-ttgttaatcatttaaaatttcgtccct 274  Q
    ||||||||| |||| | |||||||||||| | ||||||||| | |||||||||| |||||| | ||||  |||||||||||||||||||||||||||    
T  36314676 tccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaatcctggc-aatttagccttgcaattgttaatcatttaaaatttcgtccct 36314581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 274
Target Start/End: Complemental strand, 48322755 - 48322660
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgct-ttgttaatcatttaaaatttcgtccct 274  Q
    ||||||||| |||| | |||||||||||| | ||||||||| | |||||||||| |||||| | ||||  |||||||||||||||||||||||||||    
T  48322755 tccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaatcctggc-aatttagccttgcaattgttaatcatttaaaatttcgtccct 48322660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 1079651 - 1079572
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatt 237  Q
    ||||||| ||||||| ||| |||| ||||| |||||| | |||||||||||| ||||||||||| |||||||||| ||||    
T  1079651 taggctttaatatgtgtttcatccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctggcaaatt 1079572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 272
Target Start/End: Complemental strand, 10307763 - 10307689
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtcc 272  Q
    |||||||||| | | ||||||||||||||||||| ||||||||| |||| ||| ||||||||||||||||||||||    
T  10307763 tttaaaaattagtctctgtaatcgctaatcctgg-caatttacccttgcattgtttaatcatttaaaatttcgtcc 10307689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 274
Target Start/End: Original strand, 25107212 - 25107327
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgttaatcat 258  Q
    |||||||| ||||| ||| |||| ||||| |||||| | |||||||||||| | || ||||||||||||||||| ||||  || |     ||||||||||    
T  25107212 aggcttaagtatgtgtttcatccctgcaattaggggtcatttaaaaattggtctctctaatcgctaatcctggcaaattgcccctgcaaatgttaatcat 25107311  T
Q  259 ttaaaatttcgtccct 274  Q
    ||||||||||||||||    
T  25107312 ttaaaatttcgtccct 25107327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 40758540 - 40758469
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||||| |||||||||| |||||| | |||||||||||| |  |||| |||||||||||    
T  40758540 taggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtctatgtattcgctaatcct 40758469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 272
Target Start/End: Complemental strand, 3469607 - 3469514
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtcc 272  Q
    ||||||||| |||| | | |||||||||| |  |||||||||||||||||||| ||||||||| |||| ||| |||||||||||||||| |||||    
T  3469607 tccttgcaattaggcgtcatttaaaaattagttcctgtaatcgctaatcctgg-caatttacccttgcattgtttaatcatttaaaattccgtcc 3469514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 29685950 - 29686051
Alignment:
Q  169 atgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaattt 267  Q
    ||||||||  ||||||||| |||| | | |||||||||| | ||||||||||||||||||| | ||||||| | |||| ||| |||||||||||||||||    
T  29685950 atgtatttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcct-gacaatttatccttgcattgtttaatcatttaaaattt 29686048  T
Q  268 cgt 270  Q
    |||    
T  29686049 cgt 29686051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 33689381 - 33689431
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgg 209  Q
    |||||||||||||||||| |||||||||| |||||| ||||||||||||||    
T  33689381 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgg 33689431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 268
Target Start/End: Complemental strand, 37778680 - 37778591
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttc 268  Q
    ||||||||| |||| | | |||||||||| | ||||||||| ||||||||||| ||||||||| |||| ||| ||||||||||||||||||    
T  37778680 tccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcctgg-caatttacccttgcattgtttaatcatttaaaatttc 37778591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 272
Target Start/End: Complemental strand, 40788827 - 40788734
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtcc 272  Q
    ||||||||| |||| | | |||||||||| | ||||||||||||||||||||| ||||||||  |||| ||| |||||| |||||||||||||||    
T  40788827 tccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgg-caatttactcttgcattgtttaatcttttaaaatttcgtcc 40788734  T

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Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 272
Target Start/End: Original strand, 53756747 - 53756856
Alignment:
Q  163 ttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcattta 261  Q
    |||||||||||||| ||| |||||| |||||| |||||||||||||   | |||||||| ||||| | |  |||||||| |||| ||| |||||||||||    
T  53756747 ttaaatatgtatttcatctttgcaattaggggtcgtttaaaaattgattcatgtaatcgttaatcttag-taatttacccttgcattgtttaatcattta 53756845  T
Q  262 aaatttcgtcc 272  Q
    |||||||||||    
T  53756846 aaatttcgtcc 53756856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 4323607 - 4323519
Alignment:
Q  183 tgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtc 271  Q
    ||||| |||| | |||||||||||| | |||||||||||||||||||||| |||| ||| |||| ||| |||||||||||||| ||||||    
T  4323607 tgcaattaggcgtcgtttaaaaattcgtccctgtaatcgctaatcctggcaaattaacc-ttgcattgtttaatcatttaaaaattcgtc 4323519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 270
Target Start/End: Complemental strand, 9368723 - 9368619
Alignment:
Q  166 aatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaa 264  Q
    |||||||||||  ||||||||| |||||| |||||||||||||| ||||||||||  ||||||| | ||| ||||  || | ||| ||||||||||||||    
T  9368723 aatatgtatttcgtccttgcaattaggggtcgtttaaaaattggtccctgtaatcattaatccttg-caaattactcttacattgtttaatcatttaaaa 9368625  T
Q  265 tttcgt 270  Q
    ||||||    
T  9368624 tttcgt 9368619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 271
Target Start/End: Complemental strand, 32306831 - 32306739
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtc 271  Q
    ||||||||| |||| | | |||||||||| | |  |||||||||||||||||| ||||||||| |||| ||| |||||||||||||||||||||    
T  32306831 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgctaatcctgg-caatttacccttgcattgtttaatcatttaaaatttcgtc 32306739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 53856015 - 53856064
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgg 209  Q
    |||||||||||||||||||||| |||||||||||| || |||||||||||    
T  53856015 ggcttaaatatgtatttgatccctgcaaataggggtcgcttaaaaattgg 53856064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 9292232 - 9292292
Alignment:
Q  149 aaatataaataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgg 209  Q
    ||||| |||||| ||||||||||||||| |||||||||| |||||  ||||||||||||||    
T  9292232 aaataaaaatagacttaaatatgtatttcatccttgcaattagggatcgtttaaaaattgg 9292292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 237
Target Start/End: Complemental strand, 23276410 - 23276334
Alignment:
Q  161 gcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatt 237  Q
    |||| ||||||| ||| |||| ||||| |||||| | |||||||||||| |||||||||||||||||| ||| ||||    
T  23276410 gctttaatatgtgtttcatccctgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcccggcaaatt 23276334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 23457988 - 23458048
Alignment:
Q  169 atgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||| |||||||||| || ||| |||||||||||||| ||||||| |||||||||||    
T  23457988 atgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatcct 23458048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 229
Target Start/End: Original strand, 35712045 - 35712113
Alignment:
Q  161 gcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||| |||||||||| |||||  | |||||||||||| || |||| |||||||||||    
T  35712045 gcttaaatatgtatttcatccttgcaattagggatcatttaaaaattggtccatgtattcgctaatcct 35712113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 272
Target Start/End: Original strand, 3469238 - 3469312
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtcc 272  Q
    |||||||||| | || ||||||| ||||||||||| |||||||| |||| ||||| ||||||||||||||||||||    
T  3469238 tttaaaaattagtccatgtaatcactaatcctggc-aatttacccttgcattgtttaatcatttaaaatttcgtcc 3469312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 274
Target Start/End: Original strand, 8041636 - 8041730
Alignment:
Q  180 ccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatcatttaaaatttcgtccct 274  Q
    |||||||| |||| ||| |||||||||| | ||||||||| ||||||||||| || |||| |  |||  |||||||||||||||||||||||||||    
T  8041636 ccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctgg-cattttaaccctgcaattgttaatcatttaaaatttcgtccct 8041730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 272
Target Start/End: Original strand, 11910737 - 11910811
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtcc 272  Q
    ||||||||||   ||||||||||||||||||| || |||||||| |||| ||||| ||||||||||||||||||||    
T  11910737 tttaaaaattaatccctgtaatcgctaatcctagc-aatttacccttgcattgtttaatcatttaaaatttcgtcc 11910811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 272
Target Start/End: Original strand, 13948818 - 13948892
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtcc 272  Q
    |||||||||| | || |||||||||||||| |||| |||||||| |||| ||||| ||||||||||||||||||||    
T  13948818 tttaaaaattagtccatgtaatcgctaatcttggc-aatttacccttgcattgtttaatcatttaaaatttcgtcc 13948892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 268
Target Start/End: Original strand, 47551531 - 47551601
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttc 268  Q
    |||||||||| | |||||||||||||||| |||| ||||||||| |||| ||| ||||||||||||||||||    
T  47551531 tttaaaaattagtccctgtaatcgctaatactgg-caatttacccttgcattgtttaatcatttaaaatttc 47551601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 268
Target Start/End: Complemental strand, 52032527 - 52032457
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttc 268  Q
    |||||||||| | ||||||||||||||||||||| |||| |||| |||| ||| ||||||||||||||||||    
T  52032527 tttaaaaattagtccctgtaatcgctaatcctgg-caatatacccttgcattgtttaatcatttaaaatttc 52032457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 272
Target Start/End: Complemental strand, 53757150 - 53757039
Alignment:
Q  161 gcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgttaatcattt 260  Q
    |||||||||||||||| || ||||||| |||  | |||||||||||||| || |||| ||||||||||| || || | |||||    |  ||||||||||    
T  53757150 gcttaaatatgtatttcattcttgcaattagaagtcgtttaaaaattggtccatgtattcgctaatccttgcaaactaaccttgcaatcattaatcattt 53757051  T
Q  261 aaaatttcgtcc 272  Q
    ||||||||||||    
T  53757050 aaaatttcgtcc 53757039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 10770509 - 10770602
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatcatttaaaatttcgtcc 272  Q
    ||||||||| |||| | | |||||||||| | ||||||||| ||||||||||| ||||||| | ||||  |||||||||||||||||||| ||||    
T  10770509 tccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctgg-caatttagccttgcaattgttaatcatttaaaatttggtcc 10770602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 209
Target Start/End: Original strand, 36150530 - 36150576
Alignment:
Q  163 ttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgg 209  Q
    |||||||||||||| |||||||||| |||||| ||||||||||||||    
T  36150530 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgg 36150576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 36314317 - 36314410
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatcatttaaaatttcgtcc 272  Q
    ||||||||| |||| | | |||||||||| | ||||||||| ||||||||||| ||||||| | ||||  |||||||||||||||||||| ||||    
T  36314317 tccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctgg-caatttagccttgcaattgttaatcatttaaaatttggtcc 36314410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 36417691 - 36417757
Alignment:
Q  163 ttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||| |||| ||| ||||||| || |||||| |||||||||||||| ||||||| |||||||||||    
T  36417691 ttaaacatgtctttcatccttgtaattaggggtcgtttaaaaattggtccctgtattcgctaatcct 36417757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 271
Target Start/End: Complemental strand, 40506213 - 40506104
Alignment:
Q  163 ttaaatatgtatttgatccttgcaaataggggg-cgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatcattt 260  Q
    |||||||||||||| |||||||||| || |||| | ||||||| ||||  |||||||||| |||||||| | |||||||| || | || || ||||||||    
T  40506213 ttaaatatgtatttcatccttgcaattatggggtcatttaaaagttggttcctgtaatcgttaatcctgac-aatttacccttacattatttaatcattt 40506115  T
Q  261 aaaatttcgtc 271  Q
    |||||||||||    
T  40506114 aaaatttcgtc 40506104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 52032157 - 52032250
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtcc 272  Q
    ||||||||| |||| | | ||||||||||   || |||||||||||||||| || |||||||| |||| ||||| ||||||||||||||||||||    
T  52032157 tccttgcaattaggcgtcatttaaaaattaatccttgtaatcgctaatcctagc-aatttacccttgcattgtttaatcatttaaaatttcgtcc 52032250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 55052295 - 55052361
Alignment:
Q  163 ttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||||||  || |||||| ||| |||||||||| | ||||| |||||||||||    
T  55052295 ttaaatatgtatttgatccttataattaggggtcgtctaaaaattggtctctgtattcgctaatcct 55052361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 270
Target Start/End: Complemental strand, 10294947 - 10294875
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgt 270  Q
    |||||||||| |  |||||||||||||||||| || |||||||| |||| ||||| ||||||||||||||||||    
T  10294947 tttaaaaattagttcctgtaatcgctaatcctcgc-aatttacccttgcattgtttaatcatttaaaatttcgt 10294875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 274
Target Start/End: Complemental strand, 10770850 - 10770774
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgct-ttgttaatcatttaaaatttcgtccct 274  Q
    |||||||||| | ||||||||| | |||||||||| |||||| | ||||  |||||||||||||||||||||||||||    
T  10770850 tttaaaaattcgtccctgtaattgttaatcctggc-aatttagccttgcaattgttaatcatttaaaatttcgtccct 10770774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 2796526 - 2796459
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaat 226  Q
    ||||||||||||||| || |||||||||| |||| |  ||||||||||||| || |||| ||||||||    
T  2796526 aggcttaaatatgtacttcatccttgcaattaggagttgtttaaaaattggtccatgtattcgctaat 2796459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 232
Target Start/End: Complemental strand, 25108522 - 25108451
Alignment:
Q  161 gcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggc 232  Q
    |||| ||||||| ||| |||| ||||| |||||| | ||||||| |||| ||||||||| ||||||||||||    
T  25108522 gctttaatatgtgtttcatccctgcaattaggggtcatttaaaatttggtccctgtaattgctaatcctggc 25108451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 272
Target Start/End: Complemental strand, 33506338 - 33506264
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtcc 272  Q
    |||||||||| | ||||||||||||||||||||| ||||||||  || | ||| ||||||||||||||||| ||||    
T  33506338 tttaaaaattagtccctgtaatcgctaatcctgg-caatttactcttacattgtttaatcatttaaaattttgtcc 33506264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 272
Target Start/End: Original strand, 48322415 - 48322489
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatcatttaaaatttcgtcc 272  Q
    |||||||||| | ||||||||| ||||||||||| ||||||| | ||||  |||||||||||||||||||| ||||    
T  48322415 tttaaaaattcgtccctgtaattgctaatcctgg-caatttagccttgcaattgttaatcatttaaaatttggtcc 48322489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 3849030 - 3849100
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||| | || |||| ||||| |||| | |||||||||||||| ||||||| ||| |||||||    
T  3849030 aggcttaaatatgaaattcatccctgcaattaggagtcgtttaaaaattggtccctgtattcgttaatcct 3849100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 10294586 - 10294679
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtcc 272  Q
    ||||||||| |||| | | |||||||||| | ||||||||| ||||||| || | |||||||| |||  ||||| ||||||||||||||||||||    
T  10294586 tccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcatgac-aatttacccttgtattgtttaatcatttaaaatttcgtcc 10294679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 274
Target Start/End: Complemental strand, 21186126 - 21186009
Alignment:
Q  157 ataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaat 255  Q
    |||||||| ||||||| |||  ||| ||||| |||||| | ||||||||||||  | |||||||| ||||||||| ||| ||||| ||||     |||||    
T  21186126 ataggctttaatatgtgttttgtccatgcaattaggggtcatttaaaaattggtacatgtaatcgttaatcctgg-caaattacccttgcaaaccttaat 21186028  T
Q  256 catttaaaatttcgtccct 274  Q
    |||||||||||||||||||    
T  21186027 catttaaaatttcgtccct 21186009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 26463635 - 26463701
Alignment:
Q  163 ttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||| |||||||||| || ||| |||||||||||||  || |||| ||| |||||||    
T  26463635 ttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattgatccttgtattcggtaatcct 26463701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 26464015 - 26463965
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgg 209  Q
    |||||||||||||||||| |||||||||| ||| |  ||||||||||||||    
T  26464015 aggcttaaatatgtatttcatccttgcaattagagatcgtttaaaaattgg 26463965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 32306443 - 32306536
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtcc 272  Q
    ||||||||| |||| | | |||||||||| |  | |||||||||||||| || | |||||||| |||| ||||| ||||||||||||||||||||    
T  32306443 tccttgcaattaggcgtcatttaaaaattagttcatgtaatcgctaatcttgac-aatttacccttgcattgtttaatcatttaaaatttcgtcc 32306536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 230
Target Start/End: Original strand, 33154877 - 33154947
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctg 230  Q
    ||||||| ||||| |||  ||| ||||| |||||| | |||||||||||| ||||||||||| ||||||||    
T  33154877 ggcttaagtatgtgtttcgtccatgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctg 33154947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 271
Target Start/End: Original strand, 40788458 - 40788531
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtc 271  Q
    |||||||||| | |||| ||||||||||| ||| | ||||||||||||| || || |||||||||||||||||||    
T  40788458 tttaaaaattagtccctctaatcgctaattctgac-aatttacctttgcattatttaatcatttaaaatttcgtc 40788531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 271
Target Start/End: Original strand, 43998183 - 43998256
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtc 271  Q
    |||||||||| | || |||||||| |||| ||||| |||||||| |||| ||||| |||||||||||||||||||    
T  43998183 tttaaaaattagtccttgtaatcgttaattctggc-aatttacccttgcattgtttaatcatttaaaatttcgtc 43998256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 1078535 - 1078604
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatc 227  Q
    ||||||| ||||||| |||  ||| ||||| |||||| | |||||||||||| ||||||||||| |||||    
T  1078535 taggctttaatatgtttttcgtccatgcaattaggggtcatttaaaaattggtccctgtaatcgttaatc 1078604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 270
Target Start/End: Original strand, 3596163 - 3596219
Alignment:
Q  214 tgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgt 270  Q
    ||||||||||||||||| | ||||||||||||| || || ||||||||||||||||||    
T  3596163 tgtaatcgctaatcctgac-aatttacctttgcattatttaatcatttaaaatttcgt 3596219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 274
Target Start/End: Original strand, 4322590 - 4322705
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatc 256  Q
    |||||||||  |||| ||| | || ||||| |||| | |||||||||||| | || ||||||||||||||||| | |||| ||| |||| ||| ||||||    
T  4322590 taggcttaatgatgtgtttcacccctgcaattaggcgtcgtttaaaaattcgtcc-tgtaatcgctaatcctgacaaattaacc-ttgcattgtttaatc 4322687  T
Q  257 atttaaaatttcgtccct 274  Q
    |||||||| |||||||||    
T  4322688 atttaaaaattcgtccct 4322705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 229
Target Start/End: Complemental strand, 41558306 - 41558241
Alignment:
Q  164 taaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||| |||| ||||| |||||| ||||||||||||   || |||| |||||||||||    
T  41558306 taaatatgtatttcatccctgcaattaggggtcgtttaaaaattaatccatgtattcgctaatcct 41558241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 46475205 - 46475160
Alignment:
Q  163 ttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattg 208  Q
    |||||||||||||| |||||| ||| |||||| |||||||||||||    
T  46475205 ttaaatatgtatttcatccttacaattaggggtcgtttaaaaattg 46475160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 274
Target Start/End: Complemental strand, 33156403 - 33156308
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtccct 274  Q
    ||||||||| |||| | | |||||||||| | |  |||||||| ||||| |||| |||||||| || | ||||| ||||||||||||||||||||||    
T  33156403 tccttgcaattaggcgtcatttaaaaattagtcattgtaatcgttaatcttggc-aatttaccctttcattgtttaatcatttaaaatttcgtccct 33156308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 42343156 - 42343092
Alignment:
Q  163 ttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatc 227  Q
    |||||||||||||| ||||||| || || ||| |||||||||||||  || |||| |||||||||    
T  42343156 ttaaatatgtatttcatccttgtaattaagggtcgtttaaaaattgatccatgtattcgctaatc 42343092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 2e-36; HSPs: 77)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 158 - 274
Target Start/End: Complemental strand, 23663944 - 23663828
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatc 256  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||||||||||||||||||| ||||||||| |||| ||| ||||||    
T  23663944 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctgg-caatttacccttgcattgtttaatc 23663846  T
Q  257 atttaaaatttcgtccct 274  Q
    ||||||||||||||||||    
T  23663845 atttaaaatttcgtccct 23663828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 158 - 274
Target Start/End: Complemental strand, 23698674 - 23698558
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatc 256  Q
    ||||||||||||||||||||||||||| || |||||| |||||||||||||| ||||||||||||||||||||| ||||||||| |||| ||| ||||||    
T  23698674 taggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgg-caatttacccttgcattgtttaatc 23698576  T
Q  257 atttaaaatttcgtccct 274  Q
    ||||||||||||||||||    
T  23698575 atttaaaatttcgtccct 23698558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 159 - 272
Target Start/End: Complemental strand, 8317017 - 8316904
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatca 257  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||| || |||||||||||||||||| ||||||||| |||| ||| |||||||    
T  8317017 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctgg-caatttacccttgcattgtttaatca 8316919  T
Q  258 tttaaaatttcgtcc 272  Q
    |||||||||||||||    
T  8316918 tttaaaatttcgtcc 8316904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 160 - 274
Target Start/End: Original strand, 39071676 - 39071790
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcat 258  Q
    ||||||||||||||||| |||||||||| |||||| |||||||||||||| ||||||||||||||||||| | ||||||||| |||| ||| ||||||||    
T  39071676 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct-gacaatttacccttgcattgtttaatcat 39071774  T
Q  259 ttaaaatttcgtccct 274  Q
    ||||||||||||||||    
T  39071775 ttaaaatttcgtccct 39071790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 158 - 274
Target Start/End: Complemental strand, 12273283 - 12273167
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatc 256  Q
    |||| ||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||| ||||||  | ||||||||| |||| ||| ||||||    
T  12273283 taggtttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcc-cgtcaatttacccttgcattgtttaatc 12273185  T
Q  257 atttaaaatttcgtccct 274  Q
    ||||||||||||||||||    
T  12273184 atttaaaatttcgtccct 12273167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 159 - 274
Target Start/End: Complemental strand, 22915787 - 22915672
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatca 257  Q
    ||||||||||||||||||||||||||||| |||||  |||||||||||||| || |||||||||||||| ||| ||||||||| |||| ||| |||||||    
T  22915787 aggcttaaatatgtatttgatccttgcaactagggatcgtttaaaaattggtccatgtaatcgctaatcttgg-caatttacccttgcattgtttaatca 22915689  T
Q  258 tttaaaatttcgtccct 274  Q
    ||||||||| |||||||    
T  22915688 tttaaaattccgtccct 22915672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 159 - 272
Target Start/End: Complemental strand, 40318393 - 40318280
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatca 257  Q
    |||||||||||||||||| |||||||||| ||||||  ||||||||||| | || |||||||||||||||||| ||||||||| |||| ||| |||||||    
T  40318393 aggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattagtccatgtaatcgctaatcctgg-caatttacccttgcattgtttaatca 40318295  T
Q  258 tttaaaatttcgtcc 272  Q
    |||||||||||||||    
T  40318294 tttaaaatttcgtcc 40318280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 160 - 274
Target Start/End: Complemental strand, 16388954 - 16388840
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcat 258  Q
    ||||||||||||||||| |||||||||| |||||| | ||||||||||||  | |||||| ||||||||||| ||||||||| |||| ||| ||||||||    
T  16388954 ggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggttcatgtaattgctaatcctgg-caatttacccttgcattgtttaatcat 16388856  T
Q  259 ttaaaatttcgtccct 274  Q
    ||||||||||||||||    
T  16388855 ttaaaatttcgtccct 16388840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 159 - 271
Target Start/End: Original strand, 13186059 - 13186171
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatca 257  Q
    |||||||||||||||||| |||||||||| |||||  ||||||||||||||  | |||||||||||||||| | ||||||||| |||| ||| |||||||    
T  13186059 aggcttaaatatgtatttcatccttgcaattagggatcgtttaaaaattggttcatgtaatcgctaatcct-gacaatttacccttgcattgtttaatca 13186157  T
Q  258 tttaaaatttcgtc 271  Q
    ||||||||||||||    
T  13186158 tttaaaatttcgtc 13186171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 159 - 274
Target Start/End: Complemental strand, 4995085 - 4994971
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatca 257  Q
    |||||||||||||||||| |||||||||| |||||| | |||||||||| || |||||||||||||||||| | ||||||||| |||| ||| |||||||    
T  4995085 aggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaatt-ggtcctgtaatcgctaatcct-gacaatttacccttgcattgtttaatca 4994988  T
Q  258 tttaaaatttcgtccct 274  Q
    ||| |||||||||||||    
T  4994987 tttcaaatttcgtccct 4994971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 153 - 272
Target Start/End: Original strand, 7983421 - 7983540
Alignment:
Q  153 ataaataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-t 251  Q
    |||||||||||||| ||||| |||  ||||||||| |||| | | |||||||||| | ||||||||||||||||||||| ||||||||| |||| ||| |    
T  7983421 ataaataggcttaattatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgg-caatttacccttgcattgtt 7983519  T
Q  252 taatcatttaaaatttcgtcc 272  Q
    |||||||||||||||||||||    
T  7983520 taatcatttaaaatttcgtcc 7983540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 12198947 - 12199019
Alignment:
Q  157 ataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||| ||||||||||||||    
T  12198947 ataggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatcct 12199019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 12443375 - 12443447
Alignment:
Q  157 ataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||| ||||||||||||||    
T  12443375 ataggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatcct 12443447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 159 - 274
Target Start/End: Complemental strand, 20386859 - 20386744
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgttaatcat 258  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||| ||||||||||| || || |  |||     || ||||||||    
T  20386859 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagcctcgcaattattaatcat 20386760  T
Q  259 ttaaaatttcgtccct 274  Q
    ||||||||||||||||    
T  20386759 ttaaaatttcgtccct 20386744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 160 - 274
Target Start/End: Complemental strand, 31608941 - 31608827
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgt-taatcat 258  Q
    |||||||||| |||||| |||||||||| || ||| |||||||||||||| || |||| ||||||||||| | ||||||||| |||| |||| |||||||    
T  31608941 ggcttaaataagtatttcatccttgcaattaagggtcgtttaaaaattggtccatgtattcgctaatccttg-caatttacccttgcattgtctaatcat 31608843  T
Q  259 ttaaaatttcgtccct 274  Q
    ||||||||||||||||    
T  31608842 ttaaaatttcgtccct 31608827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 154 - 229
Target Start/End: Complemental strand, 38956106 - 38956031
Alignment:
Q  154 taaataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||| |||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||| |||||||||||    
T  38956106 taaattggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcct 38956031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 20385568 - 20385637
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||| |||||||||||    
T  20385568 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcct 20385637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 160 - 274
Target Start/End: Original strand, 38955703 - 38955817
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcat 258  Q
    |||||||||||||||||||||||||||| | |||  |||||||||||||| |  ||||||||||||||||||  ||||||||  ||| ||| ||||||||    
T  38955703 ggcttaaatatgtatttgatccttgcaattggggatcgtttaaaaattggtcattgtaatcgctaatcctgg-taatttacccctgcattgtttaatcat 38955801  T
Q  259 ttaaaatttcgtccct 274  Q
    |||||||||| |||||    
T  38955802 ttaaaatttcatccct 38955817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 161 - 274
Target Start/End: Complemental strand, 1425448 - 1425336
Alignment:
Q  161 gcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatt 259  Q
    |||||||||| ||||||||||||| || ||| || |||||||||||| || ||||||||| |||||||||| |||||||||  ||| ||| |||||||||    
T  1425448 gcttaaatatatatttgatccttgtaattagaggtcgtttaaaaatt-ggtcctgtaatcactaatcctgg-caatttacccctgcattgtttaatcatt 1425351  T
Q  260 taaaatttcgtccct 274  Q
    |||||||||||||||    
T  1425350 taaaatttcgtccct 1425336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 272
Target Start/End: Original strand, 12272920 - 12273030
Alignment:
Q  162 cttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgttaatcattta 261  Q
    |||||||||||||||||||||||||| |||||  |||||||||||||| | ||||||||||||||||| || || |  ||||    || |||||||||||    
T  12272920 cttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtctctgtaatcgctaatccttgcaaactagccttgcaattattaatcattta 12273019  T
Q  262 aaatttcgtcc 272  Q
    |||||||||||    
T  12273020 aaatttcgtcc 12273030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 158 - 274
Target Start/End: Complemental strand, 36186494 - 36186381
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatc 256  Q
    ||||||||||||||||||| |||||||||| || ||| ||||||||| |||| |  | ||||||||||||||| | ||||||||||||| ||||| ||||    
T  36186494 taggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaa-ttggtc--tataatcgctaatcctgac-aatttacctttgcattgtttaatc 36186399  T
Q  257 atttaaaatttcgtccct 274  Q
    ||||||||||||||||||    
T  36186398 atttaaaatttcgtccct 36186381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 1425051 - 1425122
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||| ||||||||||||||||||||||||| |||||| |||||||||||||| ||||||| || ||||||||    
T  1425051 taggtttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcactaatcct 1425122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 7313435 - 7313364
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||||| || || |||| ||||||||    
T  7313435 taggcttaaatatgtatttgatccctgcaaataggggtcgtttaaaaattggtccttgcaatcactaatcct 7313364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 226
Target Start/End: Original strand, 23698308 - 23698375
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaataggggg-cgtttaaaaattgggccctgtaatcgctaat 226  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||| | ||||||||||||||||    
T  23698308 ggcttaaatatgtatttgatccttgcaattagggggtcgtttaaaaattagtccctgtaatcgctaat 23698375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 274
Target Start/End: Original strand, 38862618 - 38862732
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcat 258  Q
    ||||||||||||||||| |||||||||| || ||| ||||||||| ||    | ||||||||||||| ||||  ||||||||||||| ||| ||||||||    
T  38862618 ggcttaaatatgtatttcatccttgcaattaagggccgtttaaaatttttttcatgtaatcgctaatactgg-taatttacctttgcattgtttaatcat 38862716  T
Q  259 ttaaaatttcgtccct 274  Q
    ||||||||||||||||    
T  38862717 ttaaaatttcgtccct 38862732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 179 - 271
Target Start/End: Complemental strand, 10445742 - 10445650
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtc 271  Q
    ||||||||| |||| | | |||||||||| | ||||||||||||||||||||| ||||||||| |||| ||| |||||||||||||||||||||    
T  10445742 tccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcctgg-caatttacccttgcattgtttaatcatttaaaatttcgtc 10445650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 160 - 274
Target Start/End: Original strand, 36928479 - 36928590
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcat 258  Q
    |||||||||||||||||   |||| ||| || ||| |||||||||||||| |  |||||||||||||||| | ||||||||| |||| ||| ||||||||    
T  36928479 ggcttaaatatgtattt---cctttcaattaagggtcgtttaaaaattggtctatgtaatcgctaatcct-gacaatttacccttgcattgtttaatcat 36928574  T
Q  259 ttaaaatttcgtccct 274  Q
    ||||||||||||||||    
T  36928575 ttaaaatttcgtccct 36928590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 274
Target Start/End: Complemental strand, 4406088 - 4405974
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcat 258  Q
    ||||||||||||||||| ||||||| || ||||||  ||||||||||||| || |||| | | ||||||| | ||||||||| ||||  || ||||||||    
T  4406088 ggcttaaatatgtatttcatccttgtaattaggggttgtttaaaaattggtccatgtatttgttaatccttg-caatttacccttgcaatgtttaatcat 4405990  T
Q  259 ttaaaatttcgtccct 274  Q
    ||||||||||||||||    
T  4405989 ttaaaatttcgtccct 4405974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 7306398 - 7306465
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaat 226  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||| || || |||| |||||    
T  7306398 aggcttaaatatgtatttgatccctgcaaataggggtcgtttaaaaattggtccttgcaatcactaat 7306465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 23663543 - 23663614
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||| |||| |||||||||| |||||| |||||||||||||| ||||||| ||| |||||||    
T  23663543 taggcttaaatatgcatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgttaatcct 23663614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 33357496 - 33357567
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||||| |||||||||| |||||| |||||||||||||  || |||| |||||||||||    
T  33357496 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccatgtattcgctaatcct 33357567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 15229950 - 15230043
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtcc 272  Q
    ||||||||| |||| | | |||||||||| | ||||||||||||||||||||| ||||||||| |||  ||| ||||||||||||||||||||||    
T  15229950 tccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgg-caatttacccttggattgtttaatcatttaaaatttcgtcc 15230043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 38862988 - 38862922
Alignment:
Q  163 ttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||| |||||||||| |||||| |||||||||||||| | ||||| |||||||||||    
T  38862988 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatcct 38862922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 16388581 - 16388650
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatc 227  Q
    ||||||||||||||||||| |||||||||| |||||| ||||||||||||||  ||| || |||||||||    
T  16388581 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttcctatattcgctaatc 16388650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 264
Target Start/End: Complemental strand, 42803646 - 42803542
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcat 258  Q
    ||||||||||||||||| |||||||||| |||  | |||||||||||||| |||| ||||| | |||| ||| ||||||||| |||| ||| ||||||||    
T  42803646 ggcttaaatatgtatttcatccttgcaattagaagtcgtttaaaaattggtccctataatcaccaatcgtgg-caatttacccttgcattgtttaatcat 42803548  T
Q  259 ttaaaa 264  Q
    ||||||    
T  42803547 ttaaaa 42803542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 274
Target Start/End: Original strand, 11674714 - 11674809
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgct-ttgttaatcatttaaaatttcgtccct 274  Q
    ||||||||| |||| | |||||||||||| | ||||||||| | |||||||||| |||||| | ||||  |||||||||||||||||||||||||||    
T  11674714 tccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaatcctggc-aatttagccttgcaattgttaatcatttaaaatttcgtccct 11674809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 25124584 - 25124675
Alignment:
Q  181 cttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtcc 272  Q
    ||||||| |||| | | |||||||||| | || |||||||||||||||||| ||||||||| |||| ||| ||||||||||||||||||||||    
T  25124584 cttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcctgg-caatttacccttgcattgtttaatcatttaaaatttcgtcc 25124675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 274
Target Start/End: Original strand, 36325253 - 36325348
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgct-ttgttaatcatttaaaatttcgtccct 274  Q
    ||||| ||| |||||| |||||||||||| | ||||||||| | |||||||||| |||||| | ||||  |||||||||||||||||||||||||||    
T  36325253 tccttacaattaggggtcgtttaaaaattcgtccctgtaattgttaatcctggc-aatttagccttgcaattgttaatcatttaaaatttcgtccct 36325348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 271
Target Start/End: Original strand, 44664508 - 44664619
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcat 258  Q
    ||||||| ||||| |||  ||||||||| |||| | | |||||||||| | ||||||||||| ||||||||| ||||||| | |||| ||| ||||||||    
T  44664508 ggcttaattatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctgg-caatttaaccttgcattgtttaatcat 44664606  T
Q  259 ttaaaatttcgtc 271  Q
    |||||||||||||    
T  44664607 ttaaaatttcgtc 44664619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 274
Target Start/End: Complemental strand, 2535978 - 2535864
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcat 258  Q
    ||||| |||||||||||  ||| ||||| |||||| | |||||||||||| ||||||||||| ||||||||| ||| ||||| || |   | ||||||||    
T  2535978 ggctttaatatgtatttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctgg-caaattacccttacaaagtttaatcat 2535880  T
Q  259 ttaaaatttcgtccct 274  Q
    ||||||||||||||||    
T  2535879 ttaaaatttcgtccct 2535864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 12199332 - 12199265
Alignment:
Q  162 cttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||||||||  || |||| | |||||||||||||| || ||||||||||||||||    
T  12199332 cttaaatatgtatttgatccttataattaggagtcgtttaaaaattggtccttgtaatcgctaatcct 12199265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 12443760 - 12443693
Alignment:
Q  162 cttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||||||||  || |||| | |||||||||||||| || ||||||||||||||||    
T  12443760 cttaaatatgtatttgatccttataattaggagtcgtttaaaaattggtccttgtaatcgctaatcct 12443693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 13186489 - 13186418
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||| ||||| |||||||||| |||||| ||||||||||||||  | |||| |||||||||||    
T  13186489 taggcttaaatatatatttcatccttgcaattaggggtcgtttaaaaattggttcatgtattcgctaatcct 13186418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 34060487 - 34060558
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||||| |||||||||| ||   | |||||||||||||| || ||||||||||||||||    
T  34060487 taggcttaaatatgtatttcatccttgcaattaaacgtcgtttaaaaattggtccatgtaatcgctaatcct 34060558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 272
Target Start/End: Complemental strand, 35634487 - 35634413
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtcc 272  Q
    |||||||||| | ||||||||||||||||||| | ||||||||| |||| ||| ||||||||||||||||||||||    
T  35634487 tttaaaaattagtccctgtaatcgctaatcct-gacaatttacccttgcattgtttaatcatttaaaatttcgtcc 35634413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 40317966 - 40318033
Alignment:
Q  162 cttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||| |||||||||| |||||| |||||||||||| | | ||||| |||||||||||    
T  40317966 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatttgtctctgtattcgctaatcct 40318033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 8316652 - 8316722
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||| |||| |||||||||| |||||| |||||||||||||| || |||| ||| |||||||    
T  8316652 aggcttaaatatgcatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgttaatcct 8316722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 272
Target Start/End: Complemental strand, 15230338 - 15230245
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtcc 272  Q
    ||||||||| |||| | | |||||||||| | |||||||||||||||| || | ||||||||| |||| ||| ||||||||||||||||||||||    
T  15230338 tccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaat-cttgacaatttacccttgcattgtttaatcatttaaaatttcgtcc 15230245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 5960046 - 5960115
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||| |||||||| |||||||||| |||||  || ||||||||||  |||||||||||||||||||    
T  5960046 ggcttaaacatgtatttcatccttgcaattagggatcgattaaaaattgctccctgtaatcgctaatcct 5960115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 274
Target Start/End: Complemental strand, 30712143 - 30712031
Alignment:
Q  161 gcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgttaatcattt 260  Q
    ||||||||||||||||||||||||| | |||||| |||||||||||| || |||||| | ||||||||| || || |  ||||    |  ||||||||||    
T  30712143 gcttaaatatgtatttgatccttgcgattaggggccgtttaaaaatt-ggtcctgtatttgctaatccttgcaaactagccttgcaatcattaatcattt 30712045  T
Q  261 aaaatttcgtccct 274  Q
    ||||||||||||||    
T  30712044 aaaatttcgtccct 30712031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 274
Target Start/End: Complemental strand, 30719920 - 30719808
Alignment:
Q  161 gcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgttaatcattt 260  Q
    ||||||||||||||||||||||||| | |||||| |||||||||||| || |||||| | ||||||||| || || |  ||||    |  ||||||||||    
T  30719920 gcttaaatatgtatttgatccttgcgattaggggccgtttaaaaatt-ggtcctgtatttgctaatccttgcaaactagccttgcaatcattaatcattt 30719822  T
Q  261 aaaatttcgtccct 274  Q
    ||||||||||||||    
T  30719821 aaaatttcgtccct 30719808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 272
Target Start/End: Complemental strand, 34061757 - 34061644
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgttaatcat 258  Q
    |||||||||||||||||  |||||||||| |||  | |||||||||||||  || |||| ||||||||||| || ||||  ||||   ||  ||||||||    
T  34061757 aggcttaaatatgtattgcatccttgcaattagacgtcgtttaaaaattgatccatgtattcgctaatccttgcaaattgcccttgcattctttaatcat 34061658  T
Q  259 ttaaaatttcgtcc 272  Q
    ||||||||||||||    
T  34061657 ttaaaatttcgtcc 34061644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 270
Target Start/End: Original strand, 37542262 - 37542334
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgt 270  Q
    |||||||||| | |||| |||||||||||||||| ||||||||| |||| ||| ||||||||||||||||||||    
T  37542262 tttaaaaattagtccctttaatcgctaatcctgg-caatttacccttgcattgtttaatcatttaaaatttcgt 37542334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 230
Target Start/End: Original strand, 9065667 - 9065735
Alignment:
Q  162 cttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctg 230  Q
    ||||||||||||||| ||| ||| || |||||| |||||||||||||| |||| |||||| ||||||||    
T  9065667 cttaaatatgtatttcatctttgtaattaggggtcgtttaaaaattggtccctataatcgttaatcctg 9065735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 274
Target Start/End: Complemental strand, 34177396 - 34177284
Alignment:
Q  162 cttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgttaatcattta 261  Q
    ||||||||||||||| ||| ||| || |||||| |||||||||||||| || |||| ||||||||||| |  || |  ||||   ||  |||||||||||    
T  34177396 cttaaatatgtatttcatctttgtaattaggggtcgtttaaaaattggtccttgtattcgctaatccttgtaaactagccttgcattctttaatcattta 34177297  T
Q  262 aaatttcgtccct 274  Q
    |||||||||||||    
T  34177296 aaatttcgtccct 34177284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 270
Target Start/End: Complemental strand, 44664915 - 44664824
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgt 270  Q
    ||||||||| |||| | | |||||||||| | | ||||||||||||||||| | ||||||||| |||| ||| ||||||||||||||||||||    
T  44664915 tccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcct-gacaatttacccttgcattgtttaatcatttaaaatttcgt 44664824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 272
Target Start/End: Complemental strand, 234128 - 234054
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtcc 272  Q
    |||||||||| | ||||||||| | |||||||||| |||||||| |||| ||||| ||||||||||||||||||||    
T  234128 tttaaaaattagtccctgtaattgttaatcctggc-aatttacccttgcattgtttaatcatttaaaatttcgtcc 234054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 272
Target Start/End: Complemental strand, 710539 - 710465
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtcc 272  Q
    |||||||||| | ||||||||| | |||||||||| |||||||| |||| ||||| ||||||||||||||||||||    
T  710539 tttaaaaattagtccctgtaattgttaatcctggc-aatttacccttgcattgtttaatcatttaaaatttcgtcc 710465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 272
Target Start/End: Complemental strand, 747751 - 747677
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtcc 272  Q
    |||||||||| | ||||||||| | |||||||||| |||||||| |||| ||||| ||||||||||||||||||||    
T  747751 tttaaaaattagtccctgtaattgttaatcctggc-aatttacccttgcattgtttaatcatttaaaatttcgtcc 747677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 272
Target Start/End: Complemental strand, 871646 - 871572
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtcc 272  Q
    |||||||||| | ||||||||| | |||||||||| |||||||| |||| ||||| ||||||||||||||||||||    
T  871646 tttaaaaattagtccctgtaattgttaatcctggc-aatttacccttgcattgtttaatcatttaaaatttcgtcc 871572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 274
Target Start/End: Original strand, 2534695 - 2534809
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcat 258  Q
    |||||||||||||||||   || ||||| || ||| ||||||||||||||  | |||||||||||||||| | |||  |||  |||| ||| ||||||||    
T  2534695 ggcttaaatatgtatttcgaccctgcaattatgggtcgtttaaaaattggtacatgtaatcgctaatccttg-caaactactcttgcattgtttaatcat 2534793  T
Q  259 ttaaaatttcgtccct 274  Q
    ||||||||||||||||    
T  2534794 ttaaaatttcgtccct 2534809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 7295357 - 7295286
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||| |||||||||||||| |||||||||| || ||  ||||||||||| || ||||||| |||||||||||    
T  7295357 taggtttaaatatgtattttatccttgcaattatggatcgtttaaaaatcggtccctgtattcgctaatcct 7295286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 274
Target Start/End: Complemental strand, 38845676 - 38845582
Alignment:
Q  180 ccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatcatttaaaatttcgtccct 274  Q
    |||||||| |||| ||| |||||||||| | ||||||||| ||||||||||| || |||| |  |||  |||||||||||||||||||||||||||    
T  38845676 ccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctgg-cattttaaccctgcaattgttaatcatttaaaatttcgtccct 38845582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 39072071 - 39072012
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgta 217  Q
    ||||||||||||||||||| ||||||||||  | ||| |||||||||||||| |||||||    
T  39072071 taggcttaaatatgtatttcatccttgcaatcaagggtcgtttaaaaattggtccctgta 39072012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 272
Target Start/End: Complemental strand, 11675072 - 11674979
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatcatttaaaatttcgtcc 272  Q
    ||||||||| |||| | | |||||||||| | ||||||||| ||||||||||| ||||||| | ||||  |||||||||||||||||||| ||||    
T  11675072 tccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctgg-caatttagccttgcaattgttaatcatttaaaatttggtcc 11674979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 268
Target Start/End: Complemental strand, 25124970 - 25124881
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttc 268  Q
    ||||||||| |||| | | |||||||||| | | |||||||||||||| |||| ||||||||| |||| ||| ||||||||||||||||||    
T  25124970 tccttgcaattaggtgtcatttaaaaattagtctctgtaatcgctaattctgg-caatttacccttgcattgtttaatcatttaaaatttc 25124881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 271
Target Start/End: Original strand, 6471709 - 6471801
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtc 271  Q
    ||||||||| |||| | | |||||||||  | | || ||||||||||||||||| |||||||| |||| ||||| |||||||||||||||||||    
T  6471709 tccttgcaattaggcgtcatttaaaaatgagtctctataatcgctaatcctggc-aatttacccttgcattgtttaatcatttaaaatttcgtc 6471801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 34685685 - 34685636
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgg 209  Q
    ||||||||||||||||| |||||||||| |||||  ||||||||||||||    
T  34685685 ggcttaaatatgtattttatccttgcaattagggatcgtttaaaaattgg 34685636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 4994655 - 4994726
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||||| ||| |||||| |||||   ||||||||||||  | ||||| |||||||||||    
T  4994655 taggcttaaatatgtatttcatcgttgcaattagggattgtttaaaaattgatctctgtattcgctaatcct 4994726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 271
Target Start/End: Complemental strand, 42945519 - 42945429
Alignment:
Q  181 cttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtc 271  Q
    ||||||| |||| | | |||||||||| |  |||||||||||||||||| | ||||||||  |||| ||| |||||||||||||||||||||    
T  42945519 cttgcaattaggcgtcatttaaaaattagttcctgtaatcgctaatcct-gacaatttactcttgcattgtttaatcatttaaaatttcgtc 42945429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 23505071 - 23505164
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgct-ttgttaatcatttaaaatttcgtcc 272  Q
    ||||||||| |||| | | |||||||||| | || |||||| ||||||| |||| |||||||| ||||  |||||||||||||||||||| ||||    
T  23505071 tccttgcaattaggcgtcatttaaaaattcgtccatgtaattgctaatcttggc-aatttacccttgcaattgttaatcatttaaaatttggtcc 23505164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 272
Target Start/End: Complemental strand, 23507834 - 23507741
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgct-ttgttaatcatttaaaatttcgtcc 272  Q
    ||||||||| |||| | | |||||||||  | ||||||||| ||||||||| || |||||||| ||||  |||||||||||||||||||| ||||    
T  23507834 tccttgcaattaggcgtcatttaaaaatacgtccctgtaattgctaatccttgc-aatttacccttgcaattgttaatcatttaaaatttggtcc 23507741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 39474600 - 39474657
Alignment:
Q  214 tgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtc 271  Q
    |||||||||||||| |||| |||||||| |||| ||||| |||||||||||||||||||    
T  39474600 tgtaatcgctaatcttggc-aatttacccttgcattgtttaatcatttaaaatttcgtc 39474657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 229
Target Start/End: Original strand, 36186105 - 36186170
Alignment:
Q  164 taaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||| ||| ||| || |||||| | ||||||| |||| ||||||| |||||||||||    
T  36186105 taaatatgtatttcatctttgtaattaggggtcttttaaaatttggtccctgtattcgctaatcct 36186170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 2266869 - 2266817
Alignment:
Q  180 ccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggc 232  Q
    |||||||| |||| ||| |||||||||| | ||||||||| ||||||||||||    
T  2266869 ccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggc 2266817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 38845319 - 38845371
Alignment:
Q  180 ccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggc 232  Q
    |||||||| |||| ||| |||||||||| | ||||||||| ||||||||||||    
T  38845319 ccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggc 38845371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 44406877 - 44406929
Alignment:
Q  180 ccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggc 232  Q
    |||||||| |||| ||| |||||||||| | ||||||||| ||||||||||||    
T  44406877 ccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggc 44406929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 8e-36; HSPs: 83)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 159 - 274
Target Start/End: Original strand, 17102019 - 17102134
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatca 257  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||| |||||||||  ||| ||| |||||||    
T  17102019 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgg-caatttacccctgcattgtttaatca 17102117  T
Q  258 tttaaaatttcgtccct 274  Q
    |||||||||||||||||    
T  17102118 tttaaaatttcgtccct 17102134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 155 - 274
Target Start/End: Complemental strand, 28469441 - 28469322
Alignment:
Q  155 aaataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-tta 253  Q
    |||||||||||||||||||||| |||||||||| |||||| |||||||||||||| ||||||||||| ||||||||| ||||||||| |||| ||| |||    
T  28469441 aaataggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctgg-caatttacccttgcattgttta 28469343  T
Q  254 atcatttaaaatttcgtccct 274  Q
    |||||||||||||||||||||    
T  28469342 atcatttaaaatttcgtccct 28469322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 161 - 274
Target Start/End: Original strand, 6253472 - 6253585
Alignment:
Q  161 gcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatt 259  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||| |||||||||  ||| ||| |||||||||    
T  6253472 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgg-caatttacccctgcattgtttaatcatt 6253570  T
Q  260 taaaatttcgtccct 274  Q
    |||||||||||||||    
T  6253571 taaaatttcgtccct 6253585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 160 - 274
Target Start/End: Original strand, 10935794 - 10935908
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcat 258  Q
    ||||||||| ||||||| |||||||||| |||||| |||||||||||||| ||||||||||||||||||||| ||||||||| |||| ||| ||||||||    
T  10935794 ggcttaaatgtgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgg-caatttacccttgcattgtttaatcat 10935892  T
Q  259 ttaaaatttcgtccct 274  Q
    ||||||||||||||||    
T  10935893 ttaaaatttcgtccct 10935908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 161 - 274
Target Start/End: Complemental strand, 32299132 - 32299019
Alignment:
Q  161 gcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatt 259  Q
    ||||||||||||||||||||||||||| |||| | |||||||||||||| ||||||||||||||||||||| ||||||||| |||| ||| |||||||||    
T  32299132 gcttaaatatgtatttgatccttgcaattaggagtcgtttaaaaattggtccctgtaatcgctaatcctgg-caatttacccttgcattgtttaatcatt 32299034  T
Q  260 taaaatttcgtccct 274  Q
     ||||||||||||||    
T  32299033 gaaaatttcgtccct 32299019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 159 - 274
Target Start/End: Original strand, 6571012 - 6571127
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatca 257  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||| ||||||| | ||||||||| |||| ||| |||||||    
T  6571012 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcct-gacaatttacccttgcattgtttaatca 6571110  T
Q  258 tttaaaatttcgtccct 274  Q
    |||||||||| ||||||    
T  6571111 tttaaaattttgtccct 6571127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 159 - 274
Target Start/End: Original strand, 27991738 - 27991853
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatca 257  Q
    ||||||||||||||||||||||||||||| |||||| |||||| ||||||  ||||||||||||||||||||| |||||||||  ||| ||| |||||||    
T  27991738 aggcttaaatatgtatttgatccttgcaattaggggtcgtttagaaattgatccctgtaatcgctaatcctgg-caatttacccctgcattgtttaatca 27991836  T
Q  258 tttaaaatttcgtccct 274  Q
    |||||||||||||||||    
T  27991837 tttaaaatttcgtccct 27991853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 158 - 274
Target Start/End: Complemental strand, 27397025 - 27396909
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatc 256  Q
    ||||||||||||||||||| |||||||||| |||||| |||||||||||||| ||||||||||||||||||| | ||||| |||  ||| ||| ||||||    
T  27397025 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct-gacaattcaccactgcattgtttaatc 27396927  T
Q  257 atttaaaatttcgtccct 274  Q
    ||||||||||||||||||    
T  27396926 atttaaaatttcgtccct 27396909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 159 - 274
Target Start/End: Original strand, 19204488 - 19204603
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatca 257  Q
    |||||||||||||||||||||||||| || |||||| |||||||||||||| ||||||||||| |||| |||| ||||||||| |||| ||| |||||||    
T  19204488 aggcttaaatatgtatttgatccttgaaattaggggtcgtttaaaaattggtccctgtaatcgttaattctgg-caatttacccttgcattgtttaatca 19204586  T
Q  258 tttaaaatttcgtccct 274  Q
    |||||||||| ||||||    
T  19204587 tttaaaattttgtccct 19204603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 159 - 274
Target Start/End: Complemental strand, 22871706 - 22871591
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatca 257  Q
    ||||||||||||||||||||||||||||| |||||| | |||||||||||| ||||||||| ||||||||| | ||||||||| |||| ||| |||||||    
T  22871706 aggcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtccctgtaatagctaatccttg-caatttacccttgcattgtttaatca 22871608  T
Q  258 tttaaaatttcgtccct 274  Q
    ||||||||||| |||||    
T  22871607 tttaaaatttcttccct 22871591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 160 - 274
Target Start/End: Original strand, 42731419 - 42731533
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcat 258  Q
    ||||||||||||||| | |||||||||| |||||| |||||||||||||| || |||||||||||||||||| |||||||||  ||| ||| ||||||||    
T  42731419 ggcttaaatatgtatctcatccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctgg-caatttacccctgcattgtttaatcat 42731517  T
Q  259 ttaaaatttcgtccct 274  Q
    ||||||||||||||||    
T  42731518 ttaaaatttcgtccct 42731533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 161 - 274
Target Start/End: Complemental strand, 23181421 - 23181308
Alignment:
Q  161 gcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatt 259  Q
    |||||||||||||||| ||| |||||| |||||| |||||||| ||||| || |||||||||||||| ||| ||||||||| |||| ||| |||||||||    
T  23181421 gcttaaatatgtatttcatcattgcaattaggggtcgtttaaatattggtccatgtaatcgctaatcttgg-caatttacccttgcattgtttaatcatt 23181323  T
Q  260 taaaatttcgtccct 274  Q
    |||||||||||||||    
T  23181322 taaaatttcgtccct 23181308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 158 - 271
Target Start/End: Complemental strand, 45011034 - 45010921
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatc 256  Q
    ||||||||||||||||||| |||||||||| |||||| ||||||||||||||  | |||| ||||||||||| | ||||||||| |||| ||| ||||||    
T  45011034 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttcatgtattcgctaatccttg-caatttacccttgcattgtttaatc 45010936  T
Q  257 atttaaaatttcgtc 271  Q
    |||||||||||||||    
T  45010935 atttaaaatttcgtc 45010921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 165 - 274
Target Start/End: Original strand, 40379774 - 40379883
Alignment:
Q  165 aaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaa 263  Q
    |||||||||||| |||||||||| |||||| |||||||||||||| |  |||| ||||||||||| | |||||||||||||  ||| |||||||||||||    
T  40379774 aaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctttgtattcgctaatccttg-caatttacctttgtattgtttaatcatttaaa 40379872  T
Q  264 atttcgtccct 274  Q
    |||||||||||    
T  40379873 atttcgtccct 40379883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 274
Target Start/End: Complemental strand, 5457337 - 5457221
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgttaatca 257  Q
    ||||||||||||||||||| |||||||||| |||||| |||||||||||||| || |||| ||| ||||||| || ||||  |||||   |  |||||||    
T  5457337 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttgtattcgttaatccttgcaaattaccctttcaatgtttaatca 5457238  T
Q  258 tttaaaatttcgtccct 274  Q
    |||||||||||||||||    
T  5457237 tttaaaatttcgtccct 5457221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 17102419 - 17102348
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||| || |||| |||||||||||    
T  17102419 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatcct 17102348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 6253869 - 6253799
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||| || |||| |||||||||||    
T  6253869 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccttgtattcgctaatcct 6253799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 27992133 - 27992067
Alignment:
Q  163 ttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||| ||||||| |||||||||||    
T  27992133 ttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcct 27992067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 32298776 - 32298846
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||| ||| ||||||| |||||||||||    
T  32298776 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaactggtccctgtattcgctaatcct 32298846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 271
Target Start/End: Complemental strand, 2640607 - 2640495
Alignment:
Q  160 ggcttaaat-atgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatca 257  Q
    ||||||||| |||||||| ||||||  || |||||| |||||||||||||| | |||||||||||||| |||| ||||||||| |||| ||| |||||||    
T  2640607 ggcttaaattatgtatttcatccttataattaggggtcgtttaaaaattggcctctgtaatcgctaattctgg-caatttacccttgcattgtttaatca 2640509  T
Q  258 tttaaaatttcgtc 271  Q
    ||||||||||||||    
T  2640508 tttaaaatttcgtc 2640495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 274
Target Start/End: Original strand, 24388821 - 24388933
Alignment:
Q  162 cttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcattt 260  Q
    ||||||||||||||| |||||||||| || ||| |||||||||||||| | ||||| ||||||||| ||| ||||||||| |||  ||| ||||||| ||    
T  24388821 cttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggtctctgtattcgctaatcatgg-caatttacccttgtattgtttaatcactt 24388919  T
Q  261 aaaatttcgtccct 274  Q
    ||||||||||||||    
T  24388920 aaaatttcgtccct 24388933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 48788801 - 48788872
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||||| || ||||||| |||||| |||||||||||||| ||||||| |||||||||||    
T  48788801 taggcttaaatatgtatttcattcttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcct 48788872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 20426760 - 20426686
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggc 232  Q
    ||||||||||||||||||| |||| ||||| ||| || |||||||||||||| ||||||| ||||||||||||||    
T  20426760 taggcttaaatatgtatttcatccctgcaattagaggtcgtttaaaaattggtccctgtattcgctaatcctggc 20426686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 24389214 - 24389144
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||| |||||||||| |||||| |||||||||||||| || |||| |||||||||||    
T  24389214 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatcct 24389144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 156 - 229
Target Start/End: Complemental strand, 34799590 - 34799517
Alignment:
Q  156 aataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||| ||||||||||||||||||||| |||||||||||| |||||||||||||| || || |||| ||||||||    
T  34799590 aataagcttaaatatgtatttgatccctgcaaataggggtcgtttaaaaattggtccttgcaatcactaatcct 34799517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 163 - 271
Target Start/End: Complemental strand, 42020022 - 42019914
Alignment:
Q  163 ttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcattta 261  Q
    |||||||||||||| |||||||||| ||||||  |||||||||||||  ||| |||||||||||| ||| ||||||||  |||| ||| ||||| |||||    
T  42020022 ttaaatatgtatttcatccttgcaattaggggttgtttaaaaattggttcctataatcgctaatcttgg-caatttactcttgcattgtttaattattta 42019924  T
Q  262 aaatttcgtc 271  Q
    ||||||||||    
T  42019923 aaatttcgtc 42019914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 160 - 272
Target Start/End: Original strand, 42362450 - 42362562
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatcat 258  Q
    ||||||||||||||||| |||||||||| |||| | |||||||||||||| || |||| ||| ||||||| | ||| ||||| |||| ||  ||||||||    
T  42362450 ggcttaaatatgtatttcatccttgcaattaggtgtcgtttaaaaattggtccttgtattcgttaatccttg-caaattacccttgcattctttaatcat 42362548  T
Q  259 ttaaaatttcgtcc 272  Q
    ||||||||||||||    
T  42362549 ttaaaatttcgtcc 42362562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 266
Target Start/End: Complemental strand, 16804054 - 16803967
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatt 266  Q
    ||||||||| |||||| |||||||||||||| |||||||||||| |||||| | ||||||||| |||| ||| ||||||||||||||||    
T  16804054 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgccaatcctag-caatttacccttgcattgtttaatcatttaaaatt 16803967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 274
Target Start/End: Original strand, 37656855 - 37656966
Alignment:
Q  163 ttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcattta 261  Q
    |||||||||||||| |||||||||| ||||   |||||||||||||| | ||||||||||||||||| | ||||||||  |||| ||| ||| | |||||    
T  37656855 ttaaatatgtatttcatccttgcaattaggaatcgtttaaaaattggtctctgtaatcgctaatcctcg-caatttacgcttgcattgtttatttattta 37656953  T
Q  262 aaatttcgtccct 274  Q
    |||||||||||||    
T  37656954 aaatttcgtccct 37656966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 272
Target Start/End: Complemental strand, 42731858 - 42731735
Alignment:
Q  149 aaatataaataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-t 247  Q
    ||||||| |||||||||||||||||||| ||||||| || |||||| |||||||||||||  |||| ||  |||||||||| | |||  || ||||||      
T  42731858 aaatatatataggcttaaatatgtatttcatccttgtaattaggggtcgtttaaaaattgatccctatatccgctaatccttg-caagctagctttgcaa 42731760  T
Q  248 ttgttaatcatttaaaatttcgtcc 272  Q
    || ||||||||||||||||||||||    
T  42731759 ttattaatcatttaaaatttcgtcc 42731735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 2640177 - 2640247
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||| |||||| ||| |||||| ||||||||||||||  |||||| |||||||||||    
T  2640177 aggcttaaatatgtatttcatccttacaattaggggtcgtttaaaaattggtacctgtattcgctaatcct 2640247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 10936223 - 10936153
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||| |||||||||| ||||||  ||||||||||||| || |||| |||||||||||    
T  10936223 aggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattggtccttgtattcgctaatcct 10936153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 229
Target Start/End: Complemental strand, 18670296 - 18670222
Alignment:
Q  155 aaataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||| ||||||||||||||||| |||||||||| |||||| |||||||||| ||| ||||||| ||| |||||||    
T  18670296 aaattggcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatcct 18670222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 27396628 - 27396698
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||| ||||||| || |||||| |||||||||||||| || |||| |||||||||||    
T  27396628 aggcttaaatatgtatttcatccttgtaattaggggccgtttaaaaattggtccatgtattcgctaatcct 27396698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 272
Target Start/End: Complemental strand, 42618318 - 42618225
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtcc 272  Q
    ||||||||| |||| | | |||||||||| |  |||||||||||||||||||| ||||||||| |||| ||| ||||||||||||||||||||||    
T  42618318 tccttgcaattaggcgtcatttaaaaattagttcctgtaatcgctaatcctgg-caatttacccttgcattgtttaatcatttaaaatttcgtcc 42618225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 13386175 - 13386106
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||| || ||||||| |||||| |||||||||||||| |||| || |||||||||||    
T  13386175 ggcttaaatatgtatttaatacttgcaattaggggtcgtttaaaaattggtccctatattcgctaatcct 13386106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 179 - 271
Target Start/End: Complemental strand, 32068503 - 32068411
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtc 271  Q
    ||||||||| |||| | | ||||||||||   ||||||||||||||||||| ||||||||||| |||| ||| |||||||||||||||||||||    
T  32068503 tccttgcaattaggagtcatttaaaaattaatccctgtaatcgctaatcct-gccaatttacccttgcattgtttaatcatttaaaatttcgtc 32068411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 28469009 - 28469077
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatc 227  Q
    |||||||||||||||||| |||||||||| |||||| |||||||||||||| || | || |||||||||    
T  28469009 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttatattcgctaatc 28469077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 274
Target Start/End: Complemental strand, 32680973 - 32680878
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgct-ttgttaatcatttaaaatttcgtccct 274  Q
    ||||||||| |||| | |||||||||||| | || |||||| |||||||||||| |||||| | ||||  |||||||||||||||||||||||||||    
T  32680973 tccttgcaattaggcgtcgtttaaaaattcgtccatgtaattgctaatcctggc-aatttagccttgcaattgttaatcatttaaaatttcgtccct 32680878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 272
Target Start/End: Original strand, 32934357 - 32934460
Alignment:
Q  169 atgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaattt 267  Q
    |||| ||| |||||||||| |||| | | |||||||||| | | ||||||||||||||||| | ||||||||| |||| ||| |||||||||||||||||    
T  32934357 atgtgtttcatccttgcaattaggtgtcatttaaaaattagtcgctgtaatcgctaatcct-gacaatttacccttgcattgtttaatcatttaaaattt 32934455  T
Q  268 cgtcc 272  Q
    |||||    
T  32934456 cgtcc 32934460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 161 - 229
Target Start/End: Original strand, 42019598 - 42019666
Alignment:
Q  161 gcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||| |||||||||| || ||| |||||||||||||| || |||| |||||||||||    
T  42019598 gcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccatgtattcgctaatcct 42019666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 28105499 - 28105570
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||||| |||||||||| || ||| |||||||||||| | ||||||| || ||||||||    
T  28105499 taggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaatttgtccctgtattcactaatcct 28105570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 209
Target Start/End: Original strand, 34793898 - 34793953
Alignment:
Q  154 taaataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgg 209  Q
    |||| |||||||||||||||||| |||| |||||||||||| ||||||||||||||    
T  34793898 taaaaaggcttaaatatgtattttatccctgcaaataggggtcgtttaaaaattgg 34793953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 42617930 - 42618023
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtcc 272  Q
    ||||||||| |||| | | |||||||||| | |||| |||||||||||||| | ||||||||| |||| ||| ||||||||||||||||||||||    
T  42617930 tccttgcaattaggcgtcatttaaaaattagtccctttaatcgctaatcct-gacaatttacccttgcattgtttaatcatttaaaatttcgtcc 42618023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 270
Target Start/End: Original strand, 32068134 - 32068206
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgt 270  Q
    |||||||||| | || |||||||||||||||||| ||||||||| |||| ||| ||||||||||||||||||||    
T  32068134 tttaaaaattagtccttgtaatcgctaatcctgg-caatttacccttgcattgtttaatcatttaaaatttcgt 32068206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 271
Target Start/End: Complemental strand, 33828381 - 33828289
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtc 271  Q
    ||||||||| |||| | | |||||||||| | | ||||||||||||||||| | ||||||||| |||| ||| |||||||||||||||||||||    
T  33828381 tccttgcaattaggtgtcatttaaaaattagtctctgtaatcgctaatcct-gacaatttacccttgcattgtttaatcatttaaaatttcgtc 33828289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 37657265 - 37657196
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||| |||||||||| |||||  |||||||||||||  ||||||| ||| |||||||    
T  37657265 ggcttaaatatgtatttcatccttgcaattagggatcgtttaaaaattgatccctgtattcgttaatcct 37657196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 40380112 - 40380043
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||| |||||||||| |||| | |||||||||||||| || |||| |||| ||||||    
T  40380112 ggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtccatgtattcgccaatcct 40380043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 43123175 - 43123244
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||  ||| ||||| |||||| |||||||||||||| ||||||| || ||||||||    
T  43123175 ggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaattggtccctgtattcactaatcct 43123244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 274
Target Start/End: Original strand, 18086287 - 18086403
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgttaatca 257  Q
    ||||||| ||||||| |||  ||||||||| |||| | |||||||||||||| |||||||| || ||||||| || ||||  ||||    || |||||||    
T  18086287 taggctttaatatgtgtttagtccttgcaattaggagtcgtttaaaaattggtccctgtaaacgataatccttgcaaattagccttgcaattattaatca 18086386  T
Q  258 tttaaaatttcgtccct 274  Q
     ||||||||||||||||    
T  18086387 cttaaaatttcgtccct 18086403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 154 - 274
Target Start/End: Complemental strand, 32688652 - 32688532
Alignment:
Q  154 taaataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtta 253  Q
    ||||||||||| ||||||| |||   |||||||| |||||| | ||||||| |||| || ||||||||||||||||| | ||||  ||||     | |||    
T  32688652 taaataggctttaatatgtgtttcgcccttgcaattaggggtcatttaaaatttggtccttgtaatcgctaatcctgacaaattgcccttgcaaatatta 32688553  T
Q  254 atcatttaaaatttcgtccct 274  Q
    |||||||||||||||||||||    
T  32688552 atcatttaaaatttcgtccct 32688532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 274
Target Start/End: Complemental strand, 17886922 - 17886804
Alignment:
Q  156 aataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaa 254  Q
    ||||||||||||||||||||| |||||||||| |||||  | |||||||||||  || |||| ||| ||||||| | |||  |||| ||||   | ||||    
T  17886922 aataggcttaaatatgtatttcatccttgcaattagggatcatttaaaaattgatccatgtattcgttaatccttg-caaactacccttgcaaatattaa 17886824  T
Q  255 tcatttaaaatttcgtccct 274  Q
    ||||||||||||||||||||    
T  17886823 tcatttaaaatttcgtccct 17886804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 19204884 - 19204817
Alignment:
Q  162 cttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||| ||||||||||| ||| ||||||  |||||||||||||  | ||||||||||||||||    
T  19204884 cttaaatatgaatttgatccttacaattaggggtggtttaaaaattggttcatgtaatcgctaatcct 19204817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 213 - 271
Target Start/End: Complemental strand, 22081932 - 22081874
Alignment:
Q  213 ctgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtc 271  Q
    |||||||||||||||||||| |||||||| |||| ||||| |||||||||||||||||||    
T  22081932 ctgtaatcgctaatcctggc-aatttacccttgcattgtttaatcatttaaaatttcgtc 22081874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 274
Target Start/End: Complemental strand, 30948537 - 30948443
Alignment:
Q  180 ccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatcatttaaaatttcgtccct 274  Q
    |||||||| |||| ||| |||||||||| | ||||||||| ||||||||||| || |||| |  |||  |||||||||||||||||||||||||||    
T  30948537 ccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctgg-cattttaaccctgcaattgttaatcatttaaaatttcgtccct 30948443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 272
Target Start/End: Original strand, 39274908 - 39274982
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtcc 272  Q
    |||||||||| | | ||||||||||||||||| |  ||||||||||||| ||||| ||||||||||||||||||||    
T  39274908 tttaaaaattagtctctgtaatcgctaatcctagt-aatttacctttgcattgtttaatcatttaaaatttcgtcc 39274982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 272
Target Start/End: Complemental strand, 43266694 - 43266580
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatc 256  Q
    |||||||||  |||| |||  ||||||||| |||| | | |||||||||| | || ||||||||||||| ||| | |||||||| |||| ||||| ||||    
T  43266694 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaattctgac-aatttacccttgcattgtttaatc 43266596  T
Q  257 atttaaaatttcgtcc 272  Q
    ||||||||||||||||    
T  43266595 atttaaaatttcgtcc 43266580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 274
Target Start/End: Complemental strand, 18087766 - 18087652
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgttaatcatt 259  Q
    ||||| ||||||| |||  ||||||||| |||||| | |||||||||||| | ||||||||||||||||| || || |  ||||    || |||||||||    
T  18087766 ggctttaatatgtgtttagtccttgcaattaggggtcatttaaaaattggtcactgtaatcgctaatccttgcaaaatagccttgcaattattaatcatt 18087667  T
Q  260 taaaatttcgtccct 274  Q
    |||||||| ||||||    
T  18087666 taaaattttgtccct 18087652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 25453147 - 25453240
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatcatttaaaatttcgtcc 272  Q
    ||||||||| |||| | | |||||||||| | |||| |||||||||||||| | ||||||||| |||| ||  ||||||||||||||||||||||    
T  25453147 tccttgcaattaggcgtcatttaaaaattagtccctataatcgctaatcct-gacaatttacccttgcattatttaatcatttaaaatttcgtcc 25453240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 271
Target Start/End: Original strand, 28890617 - 28890690
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtc 271  Q
    |||||||||| | || |||||||||||||||| || |||||||| |||| ||||| |||||||||||||||||||    
T  28890617 tttaaaaattagtccttgtaatcgctaatcctagc-aatttacccttgcattgtttaatcatttaaaatttcgtc 28890690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 29141605 - 29141556
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattg 208  Q
    |||||||||||||||||| |||||||||| ||| || |||||||||||||    
T  29141605 aggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattg 29141556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 271
Target Start/End: Complemental strand, 32934755 - 32934663
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtc 271  Q
    ||||||||| |||| | | |||||||||| | ||||||||||||||||||| | ||||||||  || | ||| |||||||||||||||||||||    
T  32934755 tccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcct-gacaatttactcttacattgtttaatcatttaaaatttcgtc 32934663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 1960302 - 1960254
Alignment:
Q  161 gcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgg 209  Q
    ||||||||||||||||||||| |||||||||||| || |||||| ||||    
T  1960302 gcttaaatatgtatttgatccctgcaaataggggtcgcttaaaatttgg 1960254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 25628499 - 25628590
Alignment:
Q  181 cttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtcc 272  Q
    ||||||| |||| | | |||||||||| | |  |||||||| |||||||||| |||||||| |||| ||||| ||||||||||||||||||||    
T  25628499 cttgcaattaggcgtcatttaaaaattagtcattgtaatcgataatcctggc-aatttacccttgcattgtttaatcatttaaaatttcgtcc 25628590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 268
Target Start/End: Complemental strand, 29144412 - 29144302
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcg-ctaatcctggccaatttacctttgctttg-ttaat 255  Q
    |||||||||||||||||||  ||| ||||| |||||| |||||||||||| || | | ||||||  ||||||| | ||| |||||||||| ||| |||||    
T  29144412 taggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaatt-ggtcatataatcgtttaatccttg-caacttacctttgcattgtttaat 29144315  T
Q  256 catttaaaatttc 268  Q
    |||||||||||||    
T  29144314 catttaaaatttc 29144302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 272
Target Start/End: Original strand, 33808323 - 33808435
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgttaatcatt 259  Q
    ||||||||||||||||| || |||| || || | | |||||||||||||| | ||||| ||||||||||| || ||||   |||   ||  |||||||||    
T  33808323 ggcttaaatatgtatttcattcttgaaattacgcgtcgtttaaaaattggtctctgtattcgctaatccttgcaaattagtcttgcattctttaatcatt 33808422  T
Q  260 taaaatttcgtcc 272  Q
    |||||||||||||    
T  33808423 taaaatttcgtcc 33808435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 272
Target Start/End: Original strand, 23058467 - 23058541
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtcc 272  Q
    |||||||||| | |||||||||  ||||||||||| ||| |||| |||| ||||| ||||||||||||||||||||    
T  23058467 tttaaaaattagtccctgtaattactaatcctggc-aatataccattgcattgtttaatcatttaaaatttcgtcc 23058541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 272
Target Start/End: Complemental strand, 25453516 - 25453442
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtcc 272  Q
    |||||||||| | ||||| ||||||||||||| | ||||||||| |||| ||| |||||||||||| |||||||||    
T  25453516 tttaaaaattagtccctgaaatcgctaatcctag-caatttacccttgcattgtttaatcatttaacatttcgtcc 25453442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 25628850 - 25628792
Alignment:
Q  214 tgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtcc 272  Q
    ||||||||||||||||| | |||||||| |||| ||||| ||||||||||||||||||||    
T  25628850 tgtaatcgctaatcctgac-aatttacccttgcattgtttaatcatttaaaatttcgtcc 25628792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 268
Target Start/End: Complemental strand, 27138329 - 27138259
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttc 268  Q
    |||||||||| | || |||||||||||||||| | ||||||||| |||| ||| ||||||||||||||||||    
T  27138329 tttaaaaattagtccttgtaatcgctaatcct-gacaatttacccttgcattgtttaatcatttaaaatttc 27138259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 274
Target Start/End: Complemental strand, 32053535 - 32053457
Alignment:
Q  196 cgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtccct 274  Q
    ||||||||||||||  ||| |||||| ||||||| || |||||| | |||| ||||| ||||||||||||||||||||||    
T  32053535 cgtttaaaaattggttcctataatcgttaatcctagc-aatttatcattgcattgtttaatcatttaaaatttcgtccct 32053457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 270
Target Start/End: Original strand, 32687396 - 32687507
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgttaatcat 258  Q
    |||||| ||||||| |||  |||||| || |||||| | ||||||| |||| ||||||||||| |||||||||| ||||  ||||     | ||||||||    
T  32687396 aggctttaatatgtgttttgtccttgtaattaggggtcatttaaaatttggtccctgtaatcgttaatcctggcaaattgcccttgcaaatattaatcat 32687495  T
Q  259 ttaaaatttcgt 270  Q
    ||||||||||||    
T  32687496 ttaaaatttcgt 32687507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 274
Target Start/End: Complemental strand, 34929027 - 34928933
Alignment:
Q  180 ccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatcatttaaaatttcgtccct 274  Q
    |||||||| |||| ||| |||||||||| | ||||||||| ||||||||||| || |||| |  |||  ||||||||| |||||||||||||||||    
T  34929027 ccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctgg-cattttaaccctgcaattgttaatcgtttaaaatttcgtccct 34928933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 232
Target Start/End: Original strand, 39686543 - 39686606
Alignment:
Q  169 atgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggc 232  Q
    |||||||| | |||||||| |||| ||| |||||||||| | ||||||||| ||||||||||||    
T  39686543 atgtatttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggc 39686606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 274
Target Start/End: Complemental strand, 39686911 - 39686817
Alignment:
Q  180 ccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatcatttaaaatttcgtccct 274  Q
    |||||||| |||| ||| |||||||||| | ||||||||| ||||||||||| || |||| |  |||  ||||||||| |||||||||||||||||    
T  39686911 ccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctgg-cattttaaccctgcaattgttaatcgtttaaaatttcgtccct 39686817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 268
Target Start/End: Original strand, 43266264 - 43266374
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatc 256  Q
    |||||||||  |||| |||  ||||||||| |||| | | |||||||||| | || |||||||| |||||||| | |||||||| |||| ||||| ||||    
T  43266264 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctgac-aatttacccttgcattgtttaatc 43266362  T
Q  257 atttaaaatttc 268  Q
    ||||||||||||    
T  43266363 atttaaaatttc 43266374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 46204440 - 46204533
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatcatttaaaatttcgtcc 272  Q
    ||||||||| |||| | | |||||||||| | ||||||||||||||| ||| | ||||||||| |||| ||  || |||||||||||||||||||    
T  46204440 tccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaaacct-gacaatttaccattgcattattttatcatttaaaatttcgtcc 46204533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 216 - 272
Target Start/End: Original strand, 22081615 - 22081671
Alignment:
Q  216 taatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtcc 272  Q
    ||||||||||| ||||| |||||||| |||| ||||| ||||||||||||||||||||    
T  22081615 taatcgctaatgctggc-aatttacccttgcattgtttaatcatttaaaatttcgtcc 22081671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 274
Target Start/End: Original strand, 13044691 - 13044786
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtccct 274  Q
    ||||||||| |||| | | ||||||| || | ||| |||||||||| ||||| | |||||||| |||| ||||| |||||||||||| |||||||||    
T  13044691 tccttgcaattaggcgccatttaaaatttcgtcccagtaatcgctactcctgac-aatttaccattgcattgtttaatcatttaaaaattcgtccct 13044786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 229
Target Start/End: Original strand, 17885649 - 17885697
Alignment:
Q  181 cttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||| |||||| |||||||||||||| ||||||| || ||||||||    
T  17885649 cttgcaattaggggtcgtttaaaaattggtccctgtattctctaatcct 17885697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 232
Target Start/End: Original strand, 20425474 - 20425550
Alignment:
Q  156 aataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggc 232  Q
    |||||||||||||||||| || |||| ||||| |||||  | ||||||||||||  | |||||||| ||||| ||||    
T  20425474 aataggcttaaatatgtaattcatccctgcaattagggatcatttaaaaattggttcatgtaatcgataatcttggc 20425550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 30948180 - 30948232
Alignment:
Q  180 ccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggc 232  Q
    |||||||| |||| ||| |||||||||| | ||||||||| ||||||||||||    
T  30948180 ccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggc 30948232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 34928670 - 34928722
Alignment:
Q  180 ccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggc 232  Q
    |||||||| |||| ||| |||||||||| | ||||||||| ||||||||||||    
T  34928670 ccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggc 34928722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 3e-35; HSPs: 90)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 160 - 274
Target Start/End: Original strand, 6367562 - 6367676
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcat 258  Q
    ||||||||||||||||| |||||||||| |||||| |||||||||||||| ||||||||||||||||||||| ||||||||| |||| ||| ||||||||    
T  6367562 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgg-caatttacccttgcattgtttaatcat 6367660  T
Q  259 ttaaaatttcgtccct 274  Q
    ||||||||||||||||    
T  6367661 ttaaaatttcgtccct 6367676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 158 - 274
Target Start/End: Complemental strand, 23209757 - 23209641
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatc 256  Q
    ||||||||||||||||||| |||||||||| |||||| |||||||||||||| || |||||||||||||||||| ||||||||| |||| ||||| ||||    
T  23209757 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctgg-caatttacccttgcattgttcaatc 23209659  T
Q  257 atttaaaatttcgtccct 274  Q
    ||||| ||||||||||||    
T  23209658 atttacaatttcgtccct 23209641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 159 - 274
Target Start/End: Original strand, 25647883 - 25647998
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatca 257  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||| ||||||||| |||||||||  ||| ||  |||||||    
T  25647883 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctgg-caatttacccctgcattatttaatca 25647981  T
Q  258 tttaaaatttcgtccct 274  Q
    |||||||||||||||||    
T  25647982 tttaaaatttcgtccct 25647998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 159 - 274
Target Start/End: Original strand, 26024422 - 26024537
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatca 257  Q
    ||||||||||||||||||||| ||||||| |||||| |||||||||||||| | ||||||||||||||||||| ||||||||| |||| ||| |||||||    
T  26024422 aggcttaaatatgtatttgattcttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctgg-caatttacccttgcattgtttaatca 26024520  T
Q  258 tttaaaatttcgtccct 274  Q
    ||||||| |||||||||    
T  26024521 tttaaaagttcgtccct 26024537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 160 - 274
Target Start/End: Original strand, 40772507 - 40772621
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcat 258  Q
    ||||||||||||||||| |||||||||| || ||| |||||||||||||| ||||||||||||||||||| | ||||||||  |||| ||| ||||||||    
T  40772507 ggcttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggtccctgtaatcgctaatcct-gacaatttactcttgcattgtttaatcat 40772605  T
Q  259 ttaaaatttcgtccct 274  Q
    ||||||||||||||||    
T  40772606 ttaaaatttcgtccct 40772621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 156 - 274
Target Start/End: Complemental strand, 47999524 - 47999406
Alignment:
Q  156 aataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaa 254  Q
    ||||||||||||||||||||||||||||| || |||||| |||||||||||||| ||||||||||||||||| ||| |||||||||  ||| ||  ||||    
T  47999524 aataggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtccctgtaatcgctaatcttgg-caatttacccctgcattatttaa 47999426  T
Q  255 tcatttaaaatttcgtccct 274  Q
    ||||||||||| ||||||||    
T  47999425 tcatttaaaatatcgtccct 47999406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 158 - 274
Target Start/End: Complemental strand, 183622 - 183505
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaataggggg-cgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaat 255  Q
    ||||||||||||||||||||||||||| || ||||||| |||||||||||||| ||||||||||||||||||| | |||||||||  ||| ||  |||||    
T  183622 taggcttaaatatgtatttgatccttgtaattagggggtcgtttaaaaattggtccctgtaatcgctaatcctag-caatttacccctgcattatttaat 183524  T
Q  256 catttaaaatttcgtccct 274  Q
    |||||||||||||||||||    
T  183523 catttaaaatttcgtccct 183505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 159 - 274
Target Start/End: Complemental strand, 17662279 - 17662164
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatca 257  Q
    |||||||||||||||||| |||||||||| | |||| ||||||||||||||  ||| |||||| ||||||||| ||||||||| |||| ||| |||||||    
T  17662279 aggcttaaatatgtatttcatccttgcaatttggggtcgtttaaaaattggttcctttaatcgttaatcctgg-caatttacccttgcattgtttaatca 17662181  T
Q  258 tttaaaatttcgtccct 274  Q
    |||||||||||||||||    
T  17662180 tttaaaatttcgtccct 17662164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 160 - 271
Target Start/End: Original strand, 34464449 - 34464560
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcat 258  Q
    ||||||||||||||||| |||||||||| |||||| |||||||||||||| || |||||||||||||| ||| ||||||||| ||||  || ||||||||    
T  34464449 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttgg-caatttacccttgcaatgtttaatcat 34464547  T
Q  259 ttaaaatttcgtc 271  Q
    |||||||||||||    
T  34464548 ttaaaatttcgtc 34464560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 158 - 273
Target Start/End: Original strand, 41098731 - 41098846
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatc 256  Q
    ||||||||||||||||||| || ||||||| |||||| |||||||||||||| | ||||||||||||||||| | ||||||||| |||| ||| ||||||    
T  41098731 taggcttaaatatgtatttcattcttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcct-gacaatttacccttgcattgtttaatc 41098829  T
Q  257 atttaaaatttcgtccc 273  Q
    ||||||||||| |||||    
T  41098830 atttaaaattttgtccc 41098846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 157 - 271
Target Start/End: Complemental strand, 36694679 - 36694565
Alignment:
Q  157 ataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaat 255  Q
    |||||||||||||||||||| |||||||||| |||| |  ||||||||||||| | ||||||||||||||||| | ||||||||| |||| ||| |||||    
T  36694679 ataggcttaaatatgtatttcatccttgcaattaggtgttgtttaaaaattggtctctgtaatcgctaatcct-gacaatttacccttgcattgtttaat 36694581  T
Q  256 catttaaaatttcgtc 271  Q
    ||||||||||||||||    
T  36694580 catttaaaatttcgtc 36694565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 157 - 271
Target Start/End: Complemental strand, 36710780 - 36710666
Alignment:
Q  157 ataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaat 255  Q
    |||||||||||||||||||| |||||||||| |||| |  ||||||||||||| | ||||||||||||||||| | ||||||||| |||| ||| |||||    
T  36710780 ataggcttaaatatgtatttcatccttgcaattaggtgttgtttaaaaattggtctctgtaatcgctaatcct-gacaatttacccttgcattgtttaat 36710682  T
Q  256 catttaaaatttcgtc 271  Q
    ||||||||||||||||    
T  36710681 catttaaaatttcgtc 36710666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 161 - 274
Target Start/End: Complemental strand, 13914494 - 13914381
Alignment:
Q  161 gcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatt 259  Q
    |||||||||||||||| |||||||||| ||| ||  ||||||||||||| || |||||||||||||||||| ||||||||| |||  ||| |||||||||    
T  13914494 gcttaaatatgtatttcatccttgcaattagaggttgtttaaaaattggtccatgtaatcgctaatcctgg-caatttacccttgtattgtttaatcatt 13914396  T
Q  260 taaaatttcgtccct 274  Q
    |||||||||||||||    
T  13914395 taaaatttcgtccct 13914381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 35473629 - 35473703
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggc 232  Q
    ||||||||||||||||||| |||||||||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  35473629 taggcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggc 35473703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 26024820 - 26024751
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||    
T  26024820 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 26024751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 274
Target Start/End: Complemental strand, 34464879 - 34464763
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatc 256  Q
    ||||||||||||||||||| |||||||||| ||||||  ||||||||||||| || |||||||||||||| ||| ||||||||| ||||  || ||||||    
T  34464879 taggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattggtccatgtaatcgctaatcttgg-caatttacccttgcaatgtttaatc 34464781  T
Q  257 atttaaaatttcgtccct 274  Q
    ||||||||||| ||||||    
T  34464780 atttaaaattttgtccct 34464763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 274
Target Start/End: Original strand, 35152341 - 35152457
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatc 256  Q
    ||||||||||||||||||| |||||||||| ||| || |||||||||||||| |||| ||||||||||| || ||||||||||| || | ||| ||||||    
T  35152341 taggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtccctataatcgctaatact-gccaatttacccttacattgtttaatc 35152439  T
Q  257 atttaaaatttcgtccct 274  Q
    ||||||||||| ||||||    
T  35152440 atttaaaattttgtccct 35152457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 162 - 274
Target Start/End: Complemental strand, 40210796 - 40210684
Alignment:
Q  162 cttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcattt 260  Q
    ||||||||||||||| ||| |||||| |||||| |||||||||||||| |  ||||||||||||| |||| ||||||||| |||| ||| ||||||||||    
T  40210796 cttaaatatgtatttcatcattgcaattaggggccgtttaaaaattggtctttgtaatcgctaattctgg-caatttacccttgcattgtttaatcattt 40210698  T
Q  261 aaaatttcgtccct 274  Q
    ||||||||||||||    
T  40210697 aaaatttcgtccct 40210684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 163 - 273
Target Start/End: Complemental strand, 17692610 - 17692500
Alignment:
Q  163 ttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcattta 261  Q
    |||||||||||||| |||||||||| |||||| ||||||||||| || |||||| |||||||||||| | ||| ||| |||||| ||| |||||||||||    
T  17692610 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatcggtccctgttatcgctaatccttg-caaattagctttgcattgtttaatcattta 17692512  T
Q  262 aaatttcgtccc 273  Q
    ||||||||||||    
T  17692511 aaatttcgtccc 17692500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 156 - 274
Target Start/End: Original strand, 19515815 - 19515933
Alignment:
Q  156 aataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaa 254  Q
    ||||||||||||||||||||| |||||||||| |||||| |||||||||||||| |  |||||||| |||| ||||  |||||||| |||| ||| ||||    
T  19515815 aataggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctttgtaatcgttaattctgg-aaatttacccttgcattgtttaa 19515913  T
Q  255 tcatttaaaatttcgtccct 274  Q
    | ||||||||||||||||||    
T  19515914 ttatttaaaatttcgtccct 19515933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 164 - 274
Target Start/End: Original strand, 1103463 - 1103575
Alignment:
Q  164 taaatatgtatttgatccttgcaaatagggggcgtttaaaaat--tgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcattt 260  Q
    ||||||||||||| ||| |||||| ||| || |||||||||||  ||| ||||||||||||||||||||| ||||||||| |||| ||| ||||||||||    
T  1103463 taaatatgtatttcatctttgcaattagaggtcgtttaaaaatattggtccctgtaatcgctaatcctgg-caatttacccttgcattgtttaatcattt 1103561  T
Q  261 aaaatttcgtccct 274  Q
    ||||||||||||||    
T  1103562 aaaatttcgtccct 1103575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 272
Target Start/End: Original strand, 7820953 - 7821066
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatca 257  Q
    |||||||||||||||||| |||||||||| |||||| | ||||| |||| | |||||||||||||||||||   ||||||||| |||| ||| |||||||    
T  7820953 aggcttaaatatgtatttcatccttgcaattaggggtcctttaataattagtccctgtaatcgctaatcct-tacaatttacccttgcattgtttaatca 7821051  T
Q  258 tttaaaatttcgtcc 272  Q
    |||||||||||||||    
T  7821052 tttaaaatttcgtcc 7821066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 169 - 274
Target Start/End: Original strand, 14878980 - 14879085
Alignment:
Q  169 atgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaattt 267  Q
    |||||||| |||||||||| |||||| ||||||||||||||  | |||||||||||||| ||| ||||||||| |||| ||| |||||||||||||||||    
T  14878980 atgtattttatccttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcttgg-caatttacccttgcattgtttaatcatttaaaattt 14879078  T
Q  268 cgtccct 274  Q
    |||||||    
T  14879079 cgtccct 14879085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 158 - 274
Target Start/End: Complemental strand, 19018059 - 19017943
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatc 256  Q
    ||||||||||||||||||| |||||||||| ||  || |||||||||||||| || |||| ||||||||||||| ||||||||| |||| ||  ||||||    
T  19018059 taggcttaaatatgtattttatccttgcaattacaggtcgtttaaaaattggtccatgtattcgctaatcctgg-caatttacccttgcattatttaatc 19017961  T
Q  257 atttaaaatttcgtccct 274  Q
    ||||||||||| ||||||    
T  19017960 atttaaaattttgtccct 19017943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 159 - 271
Target Start/End: Complemental strand, 37578621 - 37578509
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatca 257  Q
    |||||||||||||||||| |||||||||| | |||| ||||||||||||||    |||||||||||||||||| ||||||||| || | ||| |||||||    
T  37578621 aggcttaaatatgtatttcatccttgcaattgggggtcgtttaaaaattggtttttgtaatcgctaatcctgg-caatttacccttacattgattaatca 37578523  T
Q  258 tttaaaatttcgtc 271  Q
    ||||||||||||||    
T  37578522 tttaaaatttcgtc 37578509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 162 - 274
Target Start/End: Original strand, 42248475 - 42248587
Alignment:
Q  162 cttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcattt 260  Q
    ||||||||||||||| |||||||||| ||| || |||||||||||||| |  |||| ||||||||| ||| ||||||||| |||| ||| ||||||||||    
T  42248475 cttaaatatgtatttcatccttgcaattagtggtcgtttaaaaattggtctttgtagtcgctaatcgtgg-caatttacccttgcattgtttaatcattt 42248573  T
Q  261 aaaatttcgtccct 274  Q
    ||||||||||||||    
T  42248574 aaaatttcgtccct 42248587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 271
Target Start/End: Original strand, 46163033 - 46163141
Alignment:
Q  163 ttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcattta 261  Q
    |||||||||||||| ||| ||| || |||||| |||||||||||||| || |||||||||||||||| | ||||||||| |||| ||| |||||||||||    
T  46163033 ttaaatatgtatttcatcattgtaattaggggtcgtttaaaaattggtccatgtaatcgctaatcct-gacaatttacccttgcattgtttaatcattta 46163131  T
Q  262 aaatttcgtc 271  Q
    ||||||||||    
T  46163132 aaatttcgtc 46163141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 274
Target Start/End: Complemental strand, 24009966 - 24009855
Alignment:
Q  163 ttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcattta 261  Q
    |||||| ||||||| |||||||||| |||||  |||||||||||||| |  ||||||||| |||||||| ||||||||| |||| ||| |||||||||||    
T  24009966 ttaaatttgtatttcatccttgcaattagggatcgtttaaaaattggtcattgtaatcgccaatcctgg-caatttacccttgcattgtttaatcattta 24009868  T
Q  262 aaatttcgtccct 274  Q
    |||||||||||||    
T  24009867 aaatttcgtccct 24009855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 160 - 274
Target Start/End: Original strand, 30711327 - 30711441
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcat 258  Q
    ||||||||||||||||| |||||||||| ||||||  ||||||||||||  | || |||||||||||||| | ||||||| | |||| ||| ||||||||    
T  30711327 ggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattgatctctataatcgctaatcctag-caatttatccttgcattgtttaatcat 30711425  T
Q  259 ttaaaatttcgtccct 274  Q
    ||||||||||||||||    
T  30711426 ttaaaatttcgtccct 30711441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 161 - 274
Target Start/End: Original strand, 4960541 - 4960654
Alignment:
Q  161 gcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatt 259  Q
    |||||||||||||||| ||| |||||| |||||| |||||||||||||  |  |||| ||||||||||| | ||||||||| |||| ||| |||||||||    
T  4960541 gcttaaatatgtatttcatcattgcaattaggggtcgtttaaaaattgctctttgtattcgctaatccttg-caatttacccttgcattgtttaatcatt 4960639  T
Q  260 taaaatttcgtccct 274  Q
    |||||||||||||||    
T  4960640 taaaatttcgtccct 4960654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 183221 - 183290
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||||||||| ||| |||||| |||||||||||||| ||||||| |||||||||||    
T  183221 ggcttaaatatgtatttgatccttacaattaggggtcgtttaaaaattggtccctgtattcgctaatcct 183290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 34850493 - 34850424
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||| |||||||||| |||||| |||||||||||||| ||||||| |||||||||||    
T  34850493 ggcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcct 34850424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 47999123 - 47999192
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||||||||||||| |||||  |||||||||||||| ||||||| |||||||||||    
T  47999123 ggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccctgtattcgctaatcct 47999192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 274
Target Start/End: Original strand, 17691218 - 17691333
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatca 257  Q
    |||||| |||||||||||  ||||| ||| |||||| |||||||||||||| ||||||||||||||||||| | ||| |||   |||| ||| |||||||    
T  17691218 aggctttaatatgtatttcgtccttacaagtaggggtcgtttaaaaattggtccctgtaatcgctaatccttg-caaattagtcttgcattgtttaatca 17691316  T
Q  258 tttaaaatttcgtccct 274  Q
    |||||||||||||||||    
T  17691317 tttaaaatttcgtccct 17691333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 30711757 - 30711686
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||||| |||||||||| |||||| |||||||||||||| | ||||| |||||||||||    
T  30711757 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatcct 30711686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 274
Target Start/End: Original strand, 34849011 - 34849125
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatcat 258  Q
    ||||||||||||||||| |||||||||| |||||| | |||||||||||| ||||||| ||||||||||| | ||| ||||| ||||     ||||||||    
T  34849011 ggcttaaatatgtatttaatccttgcaattaggggtcttttaaaaattggtccctgtattcgctaatccttg-caaattacccttgcaaaatttaatcat 34849109  T
Q  259 ttaaaatttcgtccct 274  Q
    ||||||||||||||||    
T  34849110 ttaaaatttcgtccct 34849125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 37578190 - 37578261
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||| |||||||||||||| |||||||||| |||||| |||||||||||||| ||||||| |||||||||||    
T  37578190 taggtttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcct 37578261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 272
Target Start/End: Complemental strand, 40714871 - 40714757
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatc 256  Q
    |||||||||  |||| |||  ||||||||| |||| | | |||||||||| | || |||||||||||||||||| |||||||||||||| ||| ||||||    
T  40714871 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcctgg-caatttacctttgcattgtttaatc 40714773  T
Q  257 atttaaaatttcgtcc 272  Q
    ||||||||||||||||    
T  40714772 atttaaaatttcgtcc 40714757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 43759252 - 43759181
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||||| |||||||||| |||||| ||||||||||| || ||||||| |||||||||||    
T  43759252 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatcggtccctgtattcgctaatcct 43759181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 6367991 - 6367921
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||| |||||||||| || ||| |||||||||||||| ||||||| |||||||||||    
T  6367991 aggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatcct 6367921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 155 - 229
Target Start/End: Original strand, 36694277 - 36694351
Alignment:
Q  155 aaataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||||||| |||||||||| |||||| |||||||||||||| |  |||| |||||||||||    
T  36694277 aaataggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctatgtattcgctaatcct 36694351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 155 - 229
Target Start/End: Original strand, 36710378 - 36710452
Alignment:
Q  155 aaataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||||||| |||||||||| |||||| |||||||||||||| |  |||| |||||||||||    
T  36710378 aaataggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctatgtattcgctaatcct 36710452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 274
Target Start/End: Original strand, 5734005 - 5734123
Alignment:
Q  155 aaataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-tta 253  Q
    ||||||||||||||||||||||  ||||||||| |||||| |||||||||||| || | |||||||||||||||| | ||| |||   |||| ||| |||    
T  5734005 aaataggcttaaatatgtatttcgtccttgcaattaggggtcgtttaaaaatt-ggtcatgtaatcgctaatccttg-caaattagtcttgcattgttta 5734102  T
Q  254 atcatttaaaatttcgtccct 274  Q
    |||||||||||||| ||||||    
T  5734103 atcatttaaaattttgtccct 5734123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 235
Target Start/End: Original strand, 24009575 - 24009650
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaa 235  Q
    ||||||||||||||||| |||||||||| |||||| |||||||||||||| || |||| || |||||||| |||||    
T  24009575 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttgtattcactaatccttgccaa 24009650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 198 - 272
Target Start/End: Original strand, 31050988 - 31051062
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtcc 272  Q
    |||||||||| | | ||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||    
T  31050988 tttaaaaattagtctctgtaatcgctaatcctgg-caatttacctttgcattgtttaatcatttaaaatttcgtcc 31051062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 51015631 - 51015702
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||| ||||||| |||||||||||| |||||||||||||| || || |||| ||||||||    
T  51015631 taggcttaaatatgtaattgatccctgcaaataggggtcgtttaaaaattggtccttgcaatcactaatcct 51015702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 17661851 - 17661920
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||| |||||||||| |||||| |||||||||||| || |||||| |||||||||||    
T  17661851 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatt-ggtcctgtattcgctaatcct 17661920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 28011392 - 28011477
Alignment:
Q  189 tagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatcatttaaaatttcgtccct 274  Q
    |||||| |||||||||||| | ||||||||| ||||||||||| ||||||| | ||||  |||||||||||||||||||||||||||    
T  28011392 taggggtcgtttaaaaattcgtccctgtaattgctaatcctgg-caatttagccttgcaattgttaatcatttaaaatttcgtccct 28011477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 271
Target Start/End: Original strand, 40714442 - 40714555
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatc 256  Q
    |||||||||  |||| |||  ||||||||| |||| | | |||||||||| | ||||||||||| ||||||||| ||||||||| |||| ||| ||||||    
T  40714442 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctgg-caatttacccttgcattgtttaatc 40714540  T
Q  257 atttaaaatttcgtc 271  Q
    |||||||||||||||    
T  40714541 atttaaaatttcgtc 40714555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 40772888 - 40772818
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||| |||||||||| |||||| ||||| ||||| || ||||||| |||||||||||    
T  40772888 aggcttaaatatgtatttcatccttgcaattaggggtcgtttgaaaatcggtccctgtattcgctaatcct 40772818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 179 - 271
Target Start/End: Original strand, 17188973 - 17189065
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatcatttaaaatttcgtc 271  Q
    ||||||||| |||| | | |||||||||| | ||||||||||||||||||||| ||||||||| |||| ||  |||||||||||||||||||||    
T  17188973 tccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgg-caatttacccttgcattatttaatcatttaaaatttcgtc 17189065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 161 - 229
Target Start/End: Complemental strand, 35152757 - 35152689
Alignment:
Q  161 gcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||| |||||||||| |||||| |||||||||||| | | ||||| |||||||||||    
T  35152757 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattagtctctgtattcgctaatcct 35152689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 51019778 - 51019710
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatc 227  Q
    ||||||||||||||| ||||||| |||||||||||| |||||||||||||| || || |||| ||||||    
T  51019778 aggcttaaatatgtaattgatccctgcaaataggggtcgtttaaaaattggtccttgcaatcactaatc 51019710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 13914066 - 13914137
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||| ||||||| |||||||||| |||||| |||||||||||| | || |||| |||||||||||    
T  13914066 taggcttaaatgtgtatttcatccttgcaattaggggtcgtttaaaaattagtccatgtattcgctaatcct 13914137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 272
Target Start/End: Complemental strand, 20760893 - 20760819
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtcc 272  Q
    |||||||||| | | ||||||||||||||||||| ||||||||| |||| ||| ||||||||||||||||||||||    
T  20760893 tttaaaaattagtctctgtaatcgctaatcctgg-caatttacccttgcattgtttaatcatttaaaatttcgtcc 20760819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 274
Target Start/End: Original strand, 46899061 - 46899175
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatcat 258  Q
    ||||||||||||||||| |||| ||||| |||||| |||||||||||||| || |||| |||||||| || | |||  || ||||||  |  ||||||||    
T  46899061 ggcttaaatatgtatttcatccatgcaattaggggtcgtttaaaaattggtccatgtattcgctaattcttg-caaactagctttgcaatcattaatcat 46899159  T
Q  259 ttaaaatttcgtccct 274  Q
    ||||||||||||||||    
T  46899160 ttaaaatttcgtccct 46899175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 272
Target Start/End: Original strand, 49955385 - 49955459
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtcc 272  Q
    |||||||||| | ||||||||||||||||||||| ||||||||| |||| ||| ||||||||||||||||| ||||    
T  49955385 tttaaaaattagtccctgtaatcgctaatcctgg-caatttacccttgcattgtttaatcatttaaaattttgtcc 49955459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 1103890 - 1103820
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||| ||||| |||||||||| ||  || |||||||||||||| ||||||| |||||||||||    
T  1103890 aggcttaaatatatatttcatccttgcaattaaaggtcgtttaaaaattggtccctgtattcgctaatcct 1103820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 271
Target Start/End: Original strand, 1841457 - 1841570
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatc 256  Q
    |||||||||| |||||||| ||  |||||| || | | |||||||||||||| | | ||||||||||||||| | ||||||||| || | ||| ||||||    
T  1841457 taggcttaaacatgtatttcatatttgcaattaagagtcgtttaaaaattggtctccgtaatcgctaatcct-gacaatttacccttacattgtttaatc 1841555  T
Q  257 atttaaaatttcgtc 271  Q
    |||||||||||||||    
T  1841556 atttaaaatttcgtc 1841570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 271
Target Start/End: Complemental strand, 12906047 - 12905974
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtc 271  Q
    |||||||||| | || |||||||||||||||||| ||||||||| |||| ||| |||||||||||||||||||||    
T  12906047 tttaaaaattagtccatgtaatcgctaatcctgg-caatttacccttgcattgtttaatcatttaaaatttcgtc 12905974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 271
Target Start/End: Original strand, 32917278 - 32917371
Alignment:
Q  178 atccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtc 271  Q
    |||||||||| ||||   |||||||||||||| ||||||||||||||||||| | || |||||  |||| ||| |||||||||||||||||||||    
T  32917278 atccttgcaattaggaatcgtttaaaaattggtccctgtaatcgctaatcct-gacagtttactcttgcattgtttaatcatttaaaatttcgtc 32917371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 229
Target Start/End: Complemental strand, 49723147 - 49723085
Alignment:
Q  167 atatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||| |||||||||| |||||| |||||||||||||| || |||| |||||||||||    
T  49723147 atatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatcct 49723085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 229
Target Start/End: Complemental strand, 1841890 - 1841817
Alignment:
Q  156 aataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||| |||||||||||||| ||||||| ||  ||||| |||||||||||||  ||||||| |||||||||||    
T  1841890 aataggtttaaatatgtatttcatccttgtaatgaggggtcgtttaaaaattgttccctgtattcgctaatcct 1841817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 26234478 - 26234430
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattg 208  Q
    |||||||||||||||||||||| |||||||||||| || ||||||||||    
T  26234478 ggcttaaatatgtatttgatccctgcaaataggggtcgcttaaaaattg 26234430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 42533021 - 42533093
Alignment:
Q  157 ataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||| |||||||||||||| |||||||||| |||||| |||||||||||| | || |||| ||| |||||||    
T  42533021 ataggtttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattagtccatgtattcgttaatcct 42533093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 264
Target Start/End: Complemental strand, 17189239 - 17189173
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaa 264  Q
    |||||||||| | ||||||||||||||||||||| ||||||||| |||| ||| ||||||||||||||    
T  17189239 tttaaaaattagtccctgtaatcgctaatcctgg-caatttacccttgcattgtttaatcatttaaaa 17189173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 274
Target Start/End: Complemental strand, 33442971 - 33442877
Alignment:
Q  180 ccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatcatttaaaatttcgtccct 274  Q
    |||||||| |||| ||| |||||||||| | ||||||||| ||||||||||| || |||| |  |||  |||||||||||||||||||||||||||    
T  33442971 ccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctgg-cattttaaccctgcaattgttaatcatttaaaatttcgtccct 33442877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 272
Target Start/End: Complemental strand, 35041002 - 35040928
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtcc 272  Q
    |||||||||| | || ||||||||||||||||| | |||||||| |||| ||||| ||||||||||||||||||||    
T  35041002 tttaaaaattagtccatgtaatcgctaatcctgac-aatttacccttgcattgtttaatcatttaaaatttcgtcc 35040928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 271
Target Start/End: Complemental strand, 41099157 - 41099050
Alignment:
Q  164 taaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgttaatcatttaaa 263  Q
    ||||||||||||| |||||| ||| ||| || |||||||||||||| | ||||| ||||||||||| || || | |||||    |  |||||||||||||    
T  41099157 taaatatgtatttcatccttacaattagtggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactaaccttacaatcattaatcatttaaa 41099058  T
Q  264 atttcgtc 271  Q
    ||||||||    
T  41099057 atttcgtc 41099050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 272
Target Start/End: Complemental strand, 49955775 - 49955661
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatc 256  Q
    |||||||||  |||| |||  ||||||||| |||| | | |||||||||| | |  |||||||| |||||||||| |||||||| |||| ||||| ||||    
T  49955775 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctttgtaatcgttaatcctggc-aatttacccttgcattgtttaatc 49955677  T
Q  257 atttaaaatttcgtcc 272  Q
    ||||||||||||||||    
T  49955676 atttaaaatttcgtcc 49955661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 19017628 - 19017698
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||| |||||||||| ||||||  ||||||||||||    ||||| |||||||||||    
T  19017628 aggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattgatttctgtattcgctaatcct 19017698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 272
Target Start/End: Complemental strand, 28011746 - 28011653
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatcatttaaaatttcgtcc 272  Q
    ||||||||| |||| | | |||||||||| | ||||||||| ||||||||||| ||||||| | ||||  |||||||||||||||||||| ||||    
T  28011746 tccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctgg-caatttagccttgcaattgttaatcatttaaaatttggtcc 28011653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 209
Target Start/End: Original strand, 40435348 - 40435394
Alignment:
Q  163 ttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgg 209  Q
    |||||||||||||| |||||||||| |||||| ||||||||||||||    
T  40435348 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgg 40435394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 32917688 - 32917619
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||| || ||||||| || ||| |||||||||||||| | ||||| ||| |||||||    
T  32917688 ggcttaaatatgtatttcattcttgcaattaagggtcgtttaaaaattggtctctgtattcgttaatcct 32917619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 229
Target Start/End: Complemental strand, 13300331 - 13300263
Alignment:
Q  161 gcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||| ||| |||||| |||| | |||||||||||||| | ||||| || ||||||||    
T  13300331 gcttaaatatgtatttcatcattgcaattaggcgtcgtttaaaaattggtctctgtattcactaatcct 13300263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 274
Target Start/End: Complemental strand, 5735140 - 5735025
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgttaatcat 258  Q
    |||||||||||||||||| |||| ||||| ||||   ||||||||||||||  | |||| ||||||||||| || || |  ||||    |  ||||||||    
T  5735140 aggcttaaatatgtatttcatccctgcaattaggaatcgtttaaaaattggttcatgtattcgctaatccttgcaaactagccttacaatcattaatcat 5735041  T
Q  259 ttaaaatttcgtccct 274  Q
    ||||||||||||||||    
T  5735040 ttaaaatttcgtccct 5735025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 6518224 - 6518177
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaatt 207  Q
    ||||||||||| ||||| |||||||||| |||||| ||||||||||||    
T  6518224 ggcttaaatatatatttcatccttgcaattaggggtcgtttaaaaatt 6518177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 269
Target Start/End: Original strand, 30326515 - 30326605
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcg 269  Q
    ||||||||| |||| | | |||||||||| | | |||||||||||||| ||||  |||||||| |||| ||| |||||||||||||||||||    
T  30326515 tccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaattctgg-taatttacccttgcattgtttaatcatttaaaatttcg 30326605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 231
Target Start/End: Original strand, 31197065 - 31197136
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctgg 231  Q
    ||||||||||||||||| |||| ||||| |||||| | |||||||||| | | ||||| ||| |||||||||    
T  31197065 ggcttaaatatgtatttcatccctgcaattaggggtcatttaaaaatttgtctctgtattcgttaatcctgg 31197136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 272
Target Start/End: Original strand, 37929416 - 37929530
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatc 256  Q
    |||||||||  |||| |||  ||||||||| |||| | | |||||||||| | |||||| |||||||||||| | ||||||||| || | ||  ||||||    
T  37929416 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgttatcgctaatcct-gacaatttacccttacattatttaatc 37929514  T
Q  257 atttaaaatttcgtcc 272  Q
    ||||||||||||||||    
T  37929515 atttaaaatttcgtcc 37929530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 229
Target Start/End: Original strand, 40210364 - 40210439
Alignment:
Q  154 taaataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||| ||| |||||||||||||| |||||||||| ||| || ||||||||| |||| |  |||| |||||||||||    
T  40210364 taaaaaggtttaaatatgtatttcatccttgcaattagtggtcgtttaaaatttggtctttgtattcgctaatcct 40210439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 24905186 - 24905279
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgct-ttgttaatcatttaaaatttcgtcc 272  Q
    ||||||||| |||| | | |||||||||| | ||||||||| ||||||||| || |||||| | ||||  |||||||||||||||||||| ||||    
T  24905186 tccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgc-aatttagccttgcaattgttaatcatttaaaatttggtcc 24905279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 272
Target Start/End: Original strand, 45749841 - 45749954
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatca 257  Q
    ||||||||  |||| ||| |||||||||| |||| | | |||||||||| | |  |||||||| |||||||| | |||||||  |||| ||||| |||||    
T  45749841 aggcttaatgatgtgtttcatccttgcaattaggcgtcatttaaaaattagtctttgtaatcgttaatcctgac-aatttacacttgcattgtttaatca 45749939  T
Q  258 tttaaaatttcgtcc 272  Q
    |||||||||||||||    
T  45749940 tttaaaatttcgtcc 45749954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 48779548 - 48779478
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||| |||||||||| |||| | || ||||||||| | || |||| | |||||||||    
T  48779548 aggcttaaatatgtatttcatccttgcaattaggagtcgcttaaaaattagtccatgtatttgctaatcct 48779478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 7231678 - 7231629
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattg 208  Q
    |||||||||||||||||| ||||||| || |||| | |||||||||||||    
T  7231678 aggcttaaatatgtattttatccttgtaattaggagtcgtttaaaaattg 7231629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 14879386 - 14879317
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||| ||||| ||| |||||| |||||  |||||||||||||| | || || |||||||||||    
T  14879386 ggcttaaatatatatttcatcattgcaattagggatcgtttaaaaattggtctctatattcgctaatcct 14879317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 19322889 - 19322961
Alignment:
Q  157 ataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||||| ||||||  || || ||| |||||||||||| |  | |||| |||||||||||    
T  19322889 ataggcttaaatatgtatttcatccttataattacgggtcgtttaaaaattcgttcatgtattcgctaatcct 19322961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 274
Target Start/End: Complemental strand, 24905544 - 24905450
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgct-ttgttaatcatttaaaatttcgtccct 274  Q
    ||||||||| || ||  |||||||||||| | || |||||| |||||||||||| |||||| |  |||  |||||||||||||||||||||||||||    
T  24905544 tccttgcaattatggatcgtttaaaaattcgtcc-tgtaattgctaatcctggc-aatttagccctgcaattgttaatcatttaaaatttcgtccct 24905450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 44522144 - 44522216
Alignment:
Q  157 ataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||| ||||| |||  ||| ||||| |||||  | |||||||||||| ||||||||||| |||||||    
T  44522144 ataggcttaagtatgtgtttcgtccctgcaattagggatcatttaaaaattggaccctgtaatcgttaatcct 44522216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 268
Target Start/End: Complemental strand, 45750271 - 45750160
Alignment:
Q  157 ataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaat 255  Q
    ||||||||||  |||| |||  ||||||||| |||| | | |||||||||| | |  |||||||||||||||| | ||||||||  |||| ||| |||||    
T  45750271 ataggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctttgtaatcgctaatcctag-caatttactcttgcattgtttaat 45750173  T
Q  256 catttaaaatttc 268  Q
    |||||||||||||    
T  45750172 catttaaaatttc 45750160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 157 - 274
Target Start/End: Original strand, 1766 - 1883
Alignment:
Q  157 ataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaat 255  Q
    ||||||||||||||||||||||||||||||| |||||| |||| ||||||||| ||||||||||||||||| ||| ||||||||| |||| ||| |||||    
T  1766 ataggcttaaatatgtatttgatccttgcaattaggggtcgttaaaaaattggtccctgtaatcgctaatcttgg-caatttacccttgcattgtttaat 1864  T
Q  256 catttaaaatttcgtccct 274  Q
    |||||||||||||||||||    
T  1865 catttaaaatttcgtccct 1883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 2170 - 2102
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatc 227  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||| ||| |||||||    
T  2170 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgaaattgctaatc 2102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 1e-34; HSPs: 81)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 149 - 274
Target Start/End: Original strand, 5993878 - 5994003
Alignment:
Q  149 aaatataaataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctt 248  Q
    ||||| || ||||||||||||||||||| |||||||||| |||||| |||||||||||||| |||||||||||||||| |||| ||||||||| |||| |    
T  5993878 aaataaaattaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaattctgg-caatttacccttgcat 5993976  T
Q  249 tg-ttaatcatttaaaatttcgtccct 274  Q
    || ||||||||||||||||||||||||    
T  5993977 tgtttaatcatttaaaatttcgtccct 5994003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 159 - 272
Target Start/End: Original strand, 11761748 - 11761861
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatca 257  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||| |||||||||  ||| ||| |||||||    
T  11761748 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgg-caatttacccctgcattgtttaatca 11761846  T
Q  258 tttaaaatttcgtcc 272  Q
    |||||||||||||||    
T  11761847 tttaaaatttcgtcc 11761861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 159 - 274
Target Start/End: Complemental strand, 24547554 - 24547439
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatca 257  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||| || | |||||||||||||||| ||||||||| |||| ||| |||||||    
T  24547554 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccttataatcgctaatcctgg-caatttacccttgcattgtttaatca 24547456  T
Q  258 tttaaaatttcgtccct 274  Q
    |||||||||||||||||    
T  24547455 tttaaaatttcgtccct 24547439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 160 - 274
Target Start/End: Original strand, 27587148 - 27587262
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcat 258  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||| |||||||||  ||| | | ||||||||    
T  27587148 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgg-caatttacccctgcatcgtttaatcat 27587246  T
Q  259 ttaaaatttcgtccct 274  Q
    ||||||||||||||||    
T  27587247 ttaaaatttcgtccct 27587262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 157 - 274
Target Start/End: Original strand, 39453297 - 39453414
Alignment:
Q  157 ataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaat 255  Q
    |||| ||||||||||||||| |||||||||| |||||| |||||||||||||| | ||||||||||||||||||| ||||||||| |||| ||| |||||    
T  39453297 atagacttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctgg-caatttacccttgcattgtttaat 39453395  T
Q  256 catttaaaatttcgtccct 274  Q
    |||||||||||||||||||    
T  39453396 catttaaaatttcgtccct 39453414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 158 - 274
Target Start/End: Original strand, 35512146 - 35512262
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatc 256  Q
    |||| |||||||||||||| |||||||||| || ||| |||||||||||||| ||||||||||||||||||||| ||||||||| |||| ||| ||||||    
T  35512146 taggtttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtaatcgctaatcctgg-caatttacccttgcattgtttaatc 35512244  T
Q  257 atttaaaatttcgtccct 274  Q
    ||||||||||||||||||    
T  35512245 atttaaaatttcgtccct 35512262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 160 - 274
Target Start/End: Complemental strand, 3529270 - 3529156
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcat 258  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||| ||||||||| |||||||||  | | ||| ||||||||    
T  3529270 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctgg-caatttacccctacattgtttaatcat 3529172  T
Q  259 ttaaaatttcgtccct 274  Q
    ||||||||||||||||    
T  3529171 ttaaaatttcgtccct 3529156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 158 - 274
Target Start/End: Original strand, 13962862 - 13962978
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatc 256  Q
    ||||||||||||| ||||| |||||||||| |||||| |||||||||||||| ||||||||| |||||||||||  |||||||| |||| ||| ||||||    
T  13962862 taggcttaaatatatattttatccttgcaattaggggtcgtttaaaaattggtccctgtaattgctaatcctgg-taatttacccttgcattgtttaatc 13962960  T
Q  257 atttaaaatttcgtccct 274  Q
    ||||||||||||||||||    
T  13962961 atttaaaatttcgtccct 13962978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 157 - 274
Target Start/End: Complemental strand, 20814566 - 20814449
Alignment:
Q  157 ataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaat 255  Q
    |||||||||||||||||||| |||||||||| |||||| |||||||||||||| | ||||||||||||||||| | ||||||||  |||| ||| |||||    
T  20814566 ataggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcactgtaatcgctaatcctag-caatttacacttgcattgtttaat 20814468  T
Q  256 catttaaaatttcgtccct 274  Q
    |||||||||||| ||||||    
T  20814467 catttaaaattttgtccct 20814449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 159 - 272
Target Start/End: Original strand, 18670201 - 18670311
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatca 257  Q
    |||||||||||||||||| |||||||||| |||||| |||||||||||||| |||||||||||||||||     ||||||||| |||| ||| |||||||    
T  18670201 aggcttaaatatgtatttcatccttgcaagtaggggtcgtttaaaaattggtccctgtaatcgctaatc----gcaatttacccttgcattgtttaatca 18670296  T
Q  258 tttaaaatttcgtcc 272  Q
    |||||||||||||||    
T  18670297 tttaaaatttcgtcc 18670311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 158 - 274
Target Start/End: Complemental strand, 38475429 - 38475313
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatc 256  Q
    |||||||||||||| |||| |||||||||| |||||| |||||||||||||| || |||||||| ||||||| | ||||||||| |||| ||| ||||||    
T  38475429 taggcttaaatatgcatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgttaatcct-gacaatttacccttgcattgtttaatc 38475331  T
Q  257 atttaaaatttcgtccct 274  Q
    ||||||||||||||||||    
T  38475330 atttaaaatttcgtccct 38475313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 159 - 274
Target Start/End: Complemental strand, 16157284 - 16157169
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatca 257  Q
    |||||||||||||||||| |||||||||| |||||| |||||||||||||| |||| |||||| ||||||| | ||||||||| |||| ||| |||||||    
T  16157284 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctataatcgttaatcct-gacaatttacccttgcattgtttaatca 16157186  T
Q  258 tttaaaatttcgtccct 274  Q
    |||||||||| ||||||    
T  16157185 tttaaaattttgtccct 16157169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 160 - 274
Target Start/End: Complemental strand, 28771266 - 28771152
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcat 258  Q
    ||||||||||||||||||||||||| || |||||| |||||||||||||| || |||||||||||||| ||| |||||||||  ||  ||| ||||||||    
T  28771266 ggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttgg-caatttacccctgtattgtttaatcat 28771168  T
Q  259 ttaaaatttcgtccct 274  Q
    ||||||||||||||||    
T  28771167 ttaaaatttcgtccct 28771152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 274
Target Start/End: Original strand, 20840531 - 20840647
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatc 256  Q
    ||||||||||||||||||| |||||||||| |||||| ||||||||||||||  |||||||||| ||||||| | ||||||||| |||| ||| |||||     
T  20840531 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtacctgtaatcgttaatcctag-caatttacccttgcattgtttaatg 20840629  T
Q  257 atttaaaatttcgtccct 274  Q
    ||||||||||| ||||||    
T  20840630 atttaaaattttgtccct 20840647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 156 - 229
Target Start/End: Original strand, 28770865 - 28770938
Alignment:
Q  156 aataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||| |||||||||||    
T  28770865 aataggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcct 28770938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 274
Target Start/End: Original strand, 32242240 - 32242356
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatc 256  Q
    |||| |||||||||||||| |||||||||| |||||| |||||||||||||  ||||||||| ||||||| ||| ||||||||  |||| ||| ||||||    
T  32242240 tagggttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccctgtaatagctaatcatgg-caatttactcttgcattgtttaatc 32242338  T
Q  257 atttaaaatttcgtccct 274  Q
    ||||||||||||||||||    
T  32242339 atttaaaatttcgtccct 32242356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 163 - 270
Target Start/End: Complemental strand, 5024443 - 5024336
Alignment:
Q  163 ttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcattta 261  Q
    |||||||||||||| |||||||||| |||||| |||||||||||||| |  |||||||||||||||| | ||||||||| |||| ||| |||||||||||    
T  5024443 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcattgtaatcgctaatcct-gacaatttaccattgcattgtttaatcattta 5024345  T
Q  262 aaatttcgt 270  Q
    |||||||||    
T  5024344 aaatttcgt 5024336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 159 - 273
Target Start/End: Original strand, 17202398 - 17202512
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatca 257  Q
    |||||||||||| ||||| |||||| ||| |||||| |||||||||||||| | ||||||||||||||||| | ||||||||| |||| ||| |||| ||    
T  17202398 aggcttaaatatatatttcatccttccaattaggggtcgtttaaaaattggtcactgtaatcgctaatcct-gacaatttacccttgcattgtttaagca 17202496  T
Q  258 tttaaaatttcgtccc 273  Q
    ||||||||||||||||    
T  17202497 tttaaaatttcgtccc 17202512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 160 - 274
Target Start/End: Complemental strand, 35920612 - 35920498
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcat 258  Q
    ||||||||||||||||| ||| | |||| |||||| |||||||||||||| ||||||||||||||||||| | ||||||| | || | ||| ||||||||    
T  35920612 ggcttaaatatgtatttcatcatagcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct-gacaatttatccttccattgtttaatcat 35920514  T
Q  259 ttaaaatttcgtccct 274  Q
    ||||||||||||||||    
T  35920513 ttaaaatttcgtccct 35920498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 11762146 - 11762076
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||| |||||||||||    
T  11762146 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcct 11762076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 267
Target Start/End: Complemental strand, 13362653 - 13362549
Alignment:
Q  163 ttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcattta 261  Q
    |||||||||||||| ||| |||||| |||||| |||||||||||||| || |||||||||||||| ||| ||||||||| |||| ||| |||||||||||    
T  13362653 ttaaatatgtatttcatcattgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcatgg-caatttacccttgcattgtttaatcattta 13362555  T
Q  262 aaattt 267  Q
    ||||||    
T  13362554 aaattt 13362549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 162 - 270
Target Start/End: Original strand, 16082979 - 16083087
Alignment:
Q  162 cttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcattt 260  Q
    ||||||||||||||| |||||| ||| ||||||  ||||||||||| | ||||||||||| ||||||||| ||||||||| |||| ||| ||||||||||    
T  16082979 cttaaatatgtatttcatccttccaattaggggttgtttaaaaattagtccctgtaatcgataatcctgg-caatttacccttgcattgtttaatcattt 16083077  T
Q  261 aaaatttcgt 270  Q
    ||||||||||    
T  16083078 aaaatttcgt 16083087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 159 - 271
Target Start/End: Complemental strand, 21265571 - 21265458
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatca 257  Q
    |||||||||||||||||| |||||| ||| || ||| ||||||||||||||  |||||||||||||||| |||| | |||||| |||| ||| ||||| |    
T  21265571 aggcttaaatatgtatttcatccttacaattaagggtcgtttaaaaattggttcctgtaatcgctaatcgtggcaattttacccttgcattgtttaatta 21265472  T
Q  258 tttaaaatttcgtc 271  Q
    ||||||||||||||    
T  21265471 tttaaaatttcgtc 21265458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 274
Target Start/End: Original strand, 6150453 - 6150568
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatca 257  Q
    |||||||||||||||||| |||||||||| |||||| ||||||||||||||  | ||||||| |||||||| | |||||||   |||| ||| |||||||    
T  6150453 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttcatgtaatcactaatcct-gacaatttagtcttgcattgtttaatca 6150551  T
Q  258 tttaaaatttcgtccct 274  Q
    |||||||||||||||||    
T  6150552 tttaaaatttcgtccct 6150568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 14194421 - 14194492
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||||| |||||||||| |||||| |||||||||||||| ||||||| |||||||||||    
T  14194421 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcct 14194492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 161 - 274
Target Start/End: Original strand, 18247087 - 18247198
Alignment:
Q  161 gcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatcatt 259  Q
    |||||||||||||||| |||||||||| |||||| |||||||||||||| || |||||||||||||  ||| ||||||||| |||| ||  |||||||||    
T  18247087 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaat--tgg-caatttacccttgcattatttaatcatt 18247183  T
Q  260 taaaatttcgtccct 274  Q
    || ||||||||||||    
T  18247184 tagaatttcgtccct 18247198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 24547175 - 24547246
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||| ||||||||||||| |||||| |||| ||||||||| |||||||||||||||||||    
T  24547175 taggcttaaatatgtacttgatccttgcaattaggggtcgttaaaaaattggtccctgtaatcgctaatcct 24547246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 3528872 - 3528942
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||| | |||||||||    
T  3528872 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtatttgctaatcct 3528942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 274
Target Start/End: Complemental strand, 14194853 - 14194737
Alignment:
Q  157 ataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaat 255  Q
    ||||||||||| |||| ||| ||||||| || |||||| |||||||||||| |||| ||||||  |||||||||| ||||||||| |||| ||| |||||    
T  14194853 ataggcttaaaaatgtctttcatccttgtaattaggggtcgtttaaaaatt-ggccatgtaattactaatcctgg-caatttacccttgcattgtttaat 14194756  T
Q  256 catttaaaatttcgtccct 274  Q
    |||||||||||||||||||    
T  14194755 catttaaaatttcgtccct 14194737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 271
Target Start/End: Complemental strand, 19892734 - 19892625
Alignment:
Q  162 cttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcattt 260  Q
    ||||||||||||||| |||||||||| ||| || |||||||||||||| | ||||||||| |||||||   ||||||||| |||| ||| ||||||||||    
T  19892734 cttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtctctgtaatcgttaatcct-aacaatttacccttgcattgtttaatcattt 19892636  T
Q  261 aaaatttcgtc 271  Q
    |||||||||||    
T  19892635 aaaatttcgtc 19892625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 27587543 - 27587474
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||| || |||| |||||||||||    
T  27587543 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccttgtattcgctaatcct 27587474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 153 - 229
Target Start/End: Complemental strand, 20840872 - 20840796
Alignment:
Q  153 ataaataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||||||||| |||||| ||| |||||| ||||||||||||||   |||||||||||||||||    
T  20840872 ataaataggcttaaatatgtatttcatccttacaattaggggtcgtttaaaaattggtaactgtaatcgctaatcct 20840796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 42265734 - 42265804
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||| |||| ||||| |||||| |||||||||||||| ||||||| |||||||||||    
T  42265734 aggcttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcct 42265804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 17202827 - 17202758
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||| |||||||||| |||||| ||||||||||| || ||||||| |||||||||||    
T  17202827 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatcggtccctgtattcgctaatcct 17202758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 39453728 - 39453660
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatc 227  Q
    |||||||||||||||||| |||||||||| |||||| | |||||||||||| ||||||| |||||||||    
T  39453728 aggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtccctgtattcgctaatc 39453660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 274
Target Start/End: Original strand, 41930535 - 41930630
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatcatttaaaatttcgtccct 274  Q
    ||||||||| ||| || |||||||||||| | ||||||||| ||||||||||| ||||||| | ||||  |||||||||||||||||||||||||||    
T  41930535 tccttgcaattagaggtcgtttaaaaatttgtccctgtaattgctaatcctgg-caatttagccttgcaattgttaatcatttaaaatttcgtccct 41930630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 28269420 - 28269491
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||||| ||| |||||| |||||| |||||||||||||| ||| ||| |||||||||||    
T  28269420 taggcttaaatatgtatttcatcattgcaattaggggtcgtttaaaaattggtcccagtattcgctaatcct 28269491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 35512540 - 35512473
Alignment:
Q  162 cttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||| |||||||||| |||||| |||||||||||||| ||||||| |||| ||||||    
T  35512540 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgccaatcct 35512473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 18247505 - 18247435
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||| |||||||||| |||||| ||||||||| |||| | ||||| |||||||||||    
T  18247505 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaatttggtctctgtattcgctaatcct 18247435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 29646359 - 29646431
Alignment:
Q  157 ataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||||| ||||||| || |||||| | |||||||||||| || |||| |||||||||||    
T  29646359 ataggcttaaatatgtattttatccttgtaattaggggtcttttaaaaattggtccatgtattcgctaatcct 29646431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 167 - 274
Target Start/End: Original strand, 38442075 - 38442182
Alignment:
Q  167 atatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaat 265  Q
    |||||||||| ||| |||||| ||||||   |||||||||||| |  |||||||||||||||| | ||||||||  |||| ||| |||||||||||||||    
T  38442075 atatgtatttcatcgttgcaattaggggttatttaaaaattggtcattgtaatcgctaatcct-gacaatttactcttgcattgtttaatcatttaaaat 38442173  T
Q  266 ttcgtccct 274  Q
    |||||||||    
T  38442174 ttcgtccct 38442182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 227
Target Start/End: Complemental strand, 186847 - 186780
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatc 227  Q
    ||||||||||||||||| |||||||||| ||| || |||||||||||||| ||||||| | |||||||    
T  186847 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtccctgtatttgctaatc 186780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 271
Target Start/End: Original strand, 11047437 - 11047548
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggc-gtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatc 256  Q
    |||||||||||||||||| | |||||||| |||| | | |||||||||||  | || ||||||||||||| ||| ||||||||| |||| ||| ||||||    
T  11047437 aggcttaaatatgtatttcacccttgcaattaggagtcagtttaaaaatt--gtcccgtaatcgctaatcttgg-caatttacccttgcattgtttaatc 11047533  T
Q  257 atttaaaatttcgtc 271  Q
    |||||||||||||||    
T  11047534 atttaaaatttcgtc 11047548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 19892310 - 19892377
Alignment:
Q  162 cttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||| |||||||||| |||||| |||||||||||||| || |||| ||| |||||||    
T  19892310 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgttaatcct 19892377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 272
Target Start/End: Original strand, 33871377 - 33871451
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtcc 272  Q
    |||||||||| | |||||||||||||||| |||| ||||||||| |||| ||| ||||||||||||||||||||||    
T  33871377 tttaaaaattagtccctgtaatcgctaattctgg-caatttacccttgcattgtttaatcatttaaaatttcgtcc 33871451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 21257586 - 21257520
Alignment:
Q  163 ttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||| |||| ||||| |||||| |||||||||||||| | ||||| |||||||||||    
T  21257586 ttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggacactgtattcgctaatcct 21257520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 43159239 - 43159173
Alignment:
Q  163 ttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||| |||||||||| |||||| |||||||||||||| |  |||| |||||||||||    
T  43159239 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcgttgtattcgctaatcct 43159173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 5024019 - 5024088
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||| |||||||||| |||||| |||||||||||||   | |||| |||||||||||    
T  5024019 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatacatgtattcgctaatcct 5024088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 6150850 - 6150801
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaatt 207  Q
    ||||||||||||||||||| |||||||||| |||||| ||||||||||||    
T  6150850 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatt 6150801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 272
Target Start/End: Complemental strand, 17544478 - 17544362
Alignment:
Q  156 aataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaa 254  Q
    |||||||||||  |||| |||  ||||||||| |||| | | |||||||||| |  |||||||||| ||||||||| ||||||||| |||| ||| ||||    
T  17544478 aataggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcctgtaatcgttaatcctgg-caatttacccttgcattgtttaa 17544380  T
Q  255 tcatttaaaatttcgtcc 272  Q
    ||||||||||||| ||||    
T  17544379 tcatttaaaattttgtcc 17544362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 274
Target Start/End: Complemental strand, 6758243 - 6758148
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgct-ttgttaatcatttaaaatttcgtccct 274  Q
    ||||||||| |||| | |||||||||||| | ||||||||| | |||| ||||| |||||| | ||||  |||||||||||||||||||||||||||    
T  6758243 tccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaattctggc-aatttaaccttgcaattgttaatcatttaaaatttcgtccct 6758148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 8322827 - 8322763
Alignment:
Q  165 aaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||| |||||||||| |||||| |||||||||||||| ||| ||| ||| |||||||    
T  8322827 aaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccccgtattcgttaatcct 8322763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 272
Target Start/End: Original strand, 20152819 - 20152893
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgtcc 272  Q
    |||||||||| | | |||||||||||||||||||  |||||||| |||| ||| ||||||||||||||||||||||    
T  20152819 tttaaaaattagtctctgtaatcgctaatcctgg-aaatttacccttgcattgtttaatcatttaaaatttcgtcc 20152893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 274
Target Start/End: Complemental strand, 29646777 - 29646676
Alignment:
Q  172 tatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgt 270  Q
    ||||| ||||||| || |||| | ||||||||| ||||  | ||||||||||||||||| | |||||||| |||| ||||| ||||||||||||||||||    
T  29646777 tatttcatccttgtaattaggagtcgtttaaaa-ttggtgcatgtaatcgctaatcctgac-aatttacccttgcattgtttaatcatttaaaatttcgt 29646680  T
Q  271 ccct 274  Q
    ||||    
T  29646679 ccct 29646676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 274
Target Start/End: Complemental strand, 31482779 - 31482685
Alignment:
Q  180 ccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatcatttaaaatttcgtccct 274  Q
    |||||||| |||| ||| |||||||||| | ||||||||| ||||||||||| || |||| |  |||  |||||||||||||||||||||||||||    
T  31482779 ccttgcaattaggcggcatttaaaaatttgtccctgtaattgctaatcctgg-cattttaaccctgcaattgttaatcatttaaaatttcgtccct 31482685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 37991197 - 37991268
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||| | || |||| ||||| |||||| |||||||||||||| ||||||| ||| |||||||    
T  37991197 taggcttaaatatgaaattcatccctgcaattaggggtcgtttaaaaattggtccctgtattcgttaatcct 37991268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 209
Target Start/End: Complemental strand, 11047861 - 11047815
Alignment:
Q  163 ttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgg 209  Q
    |||||||||||||| |||||||||| |||||| ||||||||||||||    
T  11047861 ttaaatatgtatttcatccttgcaagtaggggtcgtttaaaaattgg 11047815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 11740690 - 11740756
Alignment:
Q  163 ttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||| |||||||||| |||||| |||||||||||||  || | || |||||||||||    
T  11740690 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccatatattcgctaatcct 11740756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 227
Target Start/End: Complemental strand, 19518034 - 19517968
Alignment:
Q  161 gcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatc 227  Q
    |||||||||||||||| |||||||||| ||||||  ||||||||||| | || |||| |||||||||    
T  19518034 gcttaaatatgtatttcatccttgcaattaggggtagtttaaaaattagtccatgtattcgctaatc 19517968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 32242670 - 32242601
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||| |||||||||| ||||||  |||||||||||  | |||||| |||||||||||    
T  32242670 aggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaatt-agtcctgtattcgctaatcct 32242601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 270
Target Start/End: Original strand, 8875487 - 8875559
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgt 270  Q
    |||||||||| | ||||||||||| ||||||||| ||||||||  |||| ||| ||||||||||||||||||||    
T  8875487 tttaaaaattagtccctgtaatcgttaatcctgg-caatttacacttgcattgtttaatcatttaaaatttcgt 8875559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 271
Target Start/End: Complemental strand, 33871745 - 33871653
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtc 271  Q
    ||||||||| |||| | | |||||||||| | | ||||||||  |||||||||| |||||||| |||| ||||| |||||||||||||||||||    
T  33871745 tccttgcaattaggcgccatttaaaaattagtctctgtaatcagtaatcctggc-aatttacccttgcattgtttaatcatttaaaatttcgtc 33871653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 206
Target Start/End: Complemental strand, 38442494 - 38442449
Alignment:
Q  161 gcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaat 206  Q
    |||||||||||||||| |||||||||| |||||| |||||||||||    
T  38442494 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaat 38442449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 274
Target Start/End: Original strand, 186419 - 186533
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatca 257  Q
    |||||||||||| ||||| ||| ||| || |||||| |||||||||||| | |  |||||||| |||| ||||  |||||| | |||| ||||| |||||    
T  186419 aggcttaaatatttatttcatc-ttgaaattaggggtcgtttaaaaattagtcattgtaatcgttaattctgga-aatttaaccttgcattgtttaatca 186516  T
Q  258 tttaaaatttcgtccct 274  Q
    |||||||||||||||||    
T  186517 tttaaaatttcgtccct 186533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 16156856 - 16156904
Alignment:
Q  161 gcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgg 209  Q
    |||||||||||||||| || ||||||| |||||| ||||||||||||||    
T  16156856 gcttaaatatgtatttcatacttgcaattaggggtcgtttaaaaattgg 16156904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 274
Target Start/End: Original strand, 1505987 - 1506081
Alignment:
Q  180 ccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatcatttaaaatttcgtccct 274  Q
    |||||||| |||| ||| |||||||||| | ||||||||| ||||||||||| || |||| |  |||  ||||||||| |||||||||||||||||    
T  1505987 ccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctgg-cattttaaccctgcaattgttaatcgtttaaaatttcgtccct 1506081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 273
Target Start/End: Complemental strand, 5256433 - 5256327
Alignment:
Q  166 aatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgttaatcatttaaaat 265  Q
    ||||||||| |  ||||||||| |||||  |||||||||||||| |  ||||||  |||||||| || ||||  ||||   |||||||||||||||||||    
T  5256433 aatatgtatctcgtccttgcaattagggt-cgtttaaaaattggtcaatgtaatgactaatccttgcaaattagccttacatttgttaatcatttaaaat 5256335  T
Q  266 ttcgtccc 273  Q
    ||||||||    
T  5256334 ttcgtccc 5256327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 6301970 - 6301902
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||| ||  |||||| |||||| |||||||||||||| || |||| ||| |||||||    
T  6301970 aggcttaaatatgtatttcat--ttgcaattaggggtcgtttaaaaattggtccttgtattcgttaatcct 6301902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 272
Target Start/End: Complemental strand, 11741944 - 11741833
Alignment:
Q  161 gcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgttaatcattt 260  Q
    |||||||||||||||| ||||||| || |||||| | ||||||||| || | ||||| ||||||||| | || || |  ||||   ||  ||||||||||    
T  11741944 gcttaaatatgtatttcatccttgtaattaggggtcatttaaaaatcggtctctgtattcgctaatctttgcaaactagccttgcattctttaatcattt 11741845  T
Q  261 aaaatttcgtcc 272  Q
    ||||||||||||    
T  11741844 aaaatttcgtcc 11741833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 20814134 - 20814185
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgg 209  Q
    ||||||||||||||||||| |||||| ||| ||| || ||||||||||||||    
T  20814134 taggcttaaatatgtatttcatccttacaattagaggtcgtttaaaaattgg 20814185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 272
Target Start/End: Original strand, 35920229 - 35920340
Alignment:
Q  161 gcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgttaatcattt 260  Q
    |||||||||||||||||||| ||  || |||||  |||||||||||||| |  |||| ||||||||||| || ||||  ||||    |  ||||||||||    
T  35920229 gcttaaatatgtatttgatcattttaattagggatcgtttaaaaattggtcaatgtattcgctaatccttgcaaattagccttgcaatcattaatcattt 35920328  T
Q  261 aaaatttcgtcc 272  Q
    ||||||||||||    
T  35920329 aaaatttcgtcc 35920340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 5835851 - 5835785
Alignment:
Q  163 ttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||| |||||||||| |||| |  |||||||||||||   ||||| |||||||||||    
T  5835851 ttaaatatgtatttcatccttgcaattaggagttgtttaaaaattggtttctgtattcgctaatcct 5835785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 16083372 - 16083302
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||| |||||||||| || ||  ||||||||||||||  | | || |||||||||||    
T  16083372 aggcttaaatatgtatttcatccttgcaattaaggatcgtttaaaaattggttcatatattcgctaatcct 16083302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 194
Target Start/End: Original strand, 27937051 - 27937089
Alignment:
Q  156 aataggcttaaatatgtatttgatccttgcaaatagggg 194  Q
    ||||||||||||||||||||| |||||||||| ||||||    
T  27937051 aataggcttaaatatgtatttcatccttgcaattagggg 27937089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 40150243 - 40150173
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||| ||||||| |||  ||||||||| |||||| | ||| |||||||| ||||||||||| |||||||    
T  40150243 aggctttaatatgtgtttcgtccttgcaattaggggtcattttaaaattggtccctgtaatcgttaatcct 40150173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 27937424 - 27937379
Alignment:
Q  163 ttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattg 208  Q
    |||||||||||||| |||||||||| || ||| |||||||||||||    
T  27937424 ttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattg 27937379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 206
Target Start/End: Complemental strand, 28269810 - 28269762
Alignment:
Q  157 ataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaat 206  Q
    |||||||||||||||||||| || ||||||| |||||| |||||||||||    
T  28269810 ataggcttaaatatgtatttcat-cttgcaattaggggtcgtttaaaaat 28269762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 1506344 - 1506292
Alignment:
Q  180 ccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggc 232  Q
    |||||||| |||| ||| |||||||||| | ||||||||| ||||||||||||    
T  1506344 ccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggc 1506292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 209
Target Start/End: Complemental strand, 13963260 - 13963208
Alignment:
Q  157 ataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgg 209  Q
    |||||||||||||| ||||| ||||||| || || ||| ||||||||||||||    
T  13963260 ataggcttaaatatatatttcatccttgtaattatgggtcgtttaaaaattgg 13963208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 31482422 - 31482474
Alignment:
Q  180 ccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggc 232  Q
    |||||||| |||| ||| |||||||||| | ||||||||| ||||||||||||    
T  31482422 ccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggc 31482474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 37992714 - 37992670
Alignment:
Q  162 cttaaatatgtatttgatccttgcaaatagggggcgtttaaaaat 206  Q
    ||||||||||||||| |||| ||||| |||||| |||||||||||    
T  37992714 cttaaatatgtatttcatccatgcaattaggggtcgtttaaaaat 37992670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 158 - 274
Target Start/End: Original strand, 139670 - 139786
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatc 256  Q
    |||| ||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||| |||||||||  ||  ||| ||||||    
T  139670 taggattaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgg-caatttacccatgaattgattaatc 139768  T
Q  257 atttaaaatttcgtccct 274  Q
    ||||||||||||||||||    
T  139769 atttaaaatttcgtccct 139786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 226
Target Start/End: Complemental strand, 140066 - 140003
Alignment:
Q  163 ttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaat 226  Q
    ||||||||||||||||||||||||| ||||||  ||||||||||||| ||||||| || |||||    
T  140066 ttaaatatgtatttgatccttgcaattaggggttgtttaaaaattggtccctgtattcactaat 140003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 160 - 274
Target Start/End: Original strand, 68965 - 69079
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcat 258  Q
    ||||||||||||||||| |||||||||| |||||| | |||||||||||| |||||||||| |||||||||| ||||||||| |||| ||| ||||||||    
T  68965 ggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtccctgtaatcactaatcctgg-caatttacccttgcattgtttaatcat 69063  T
Q  259 ttaaaatttcgtccct 274  Q
    ||||||||||||||||    
T  69064 ttaaaatttcgtccct 69079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 69393 - 69324
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    ||||||||||||||||| |||||||||| |||  | |||||||||||||| ||||||| |||||||||||    
T  69393 ggcttaaatatgtatttcatccttgcaattagatgtcgtttaaaaattggtccctgtattcgctaatcct 69324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 159 - 274
Target Start/End: Complemental strand, 37992 - 37877
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatca 257  Q
    |||||||||||||||||| |||||||||| |||| | |||||||||||||| |  |||||||||||||||| | ||||||||| |||  ||| |||||||    
T  37992 aggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtctttgtaatcgctaatcct-gacaatttacccttgtattgtttaatca 37894  T
Q  258 tttaaaatttcgtccct 274  Q
    |||||||||||||||||    
T  37893 tttaaaatttcgtccct 37877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 226
Target Start/End: Original strand, 37564 - 37630
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaat 226  Q
    ||||||||||| ||||| |||||||||| ||| |  |||||||||||||| || |||| ||||||||    
T  37564 ggcttaaatatatatttcatccttgcaattagagatcgtttaaaaattggtccttgtattcgctaat 37630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 6508 - 6438
Alignment:
Q  159 aggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcct 229  Q
    |||||||||||||||||| |||||||||| |||||| |||||||||||||| ||||||| |||||||||||    
T  6508 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcct 6438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 163 - 270
Target Start/End: Original strand, 19860 - 19967
Alignment:
Q  163 ttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgc-tttgttaatcattta 261  Q
    ||||||||||||||  ||||||||| || ||| |||||||||||||| |||||| |||||||||||| | ||| |||||||||| ||  |||||||||||    
T  19860 ttaaatatgtatttcgtccttgcaattatgggtcgtttaaaaattggtccctgtgatcgctaatccttg-caaattacctttgcattctttaatcattta 19958  T
Q  262 aaatttcgt 270  Q
    |||||||||    
T  19959 aaatttcgt 19967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 160 - 241
Target Start/End: Complemental strand, 14818 - 14738
Alignment:
Q  160 ggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacc 241  Q
    |||||||||||| |||| |||||||||| |||||| |||||||||||||| | || |||||||||||||||| |||||||||    
T  14818 ggcttaaatatgaatttcatccttgcaattaggggtcgtttaaaaattggtctctctaatcgctaatcctgg-caatttacc 14738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 207
Target Start/End: Original strand, 14427 - 14476
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaatt 207  Q
    ||||||||||||||||||| ||| |||||| |||| | ||||||||||||    
T  14427 taggcttaaatatgtatttcatcattgcaattaggagtcgtttaaaaatt 14476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 271
Target Start/End: Complemental strand, 11569 - 11455
Alignment:
Q  157 ataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aat 255  Q
    ||||||||||  |||| ||| |||||||||| |||| | | |||||||||| | || |||||||| |||||||||| |||||||| |||| ||||| |||    
T  11569 ataggcttaatgatgtgtttcatccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctggc-aatttacccttgcattgtttaat 11471  T
Q  256 catttaaaatttcgtc 271  Q
    ||||||||||||||||    
T  11470 catttaaaatttcgtc 11455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 11180 - 11252
Alignment:
Q  200 taaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtcc 272  Q
    |||||||| | | |||| |||||||||| |||| |||||||| |||| ||||| ||||||||||||||||||||    
T  11180 taaaaattagtctctgtgatcgctaatcttggc-aatttacccttgcattgtttaatcatttaaaatttcgtcc 11252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 272
Target Start/End: Original strand, 4957 - 5074
Alignment:
Q  155 aaataggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgttaa 254  Q
    |||||||||||||||||||||| |||| | ||| |||||| |||||||||||||  |||| || ||||||||||| || || |  ||||    || ||||    
T  4957 aaataggcttaaatatgtatttcatccctacaattaggggtcgtttaaaaattgatccctatattcgctaatccttgcaaactagccttgcaattattaa 5056  T
Q  255 tcatttaaaatttcgtcc 272  Q
    ||||||||||||||||||    
T  5057 tcatttaaaatttcgtcc 5074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 270
Target Start/End: Complemental strand, 12646 - 12555
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttg-ttaatcatttaaaatttcgt 270  Q
    ||||||||| |||| | | |||||||||| | ||||||||||| ||||||||| ||||||||| |||| ||| ||||||||||||||||||||    
T  12646 tccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctgg-caatttacccttgcattgtttaatcatttaaaatttcgt 12555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 271
Target Start/End: Original strand, 12295 - 12351
Alignment:
Q  215 gtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtc 271  Q
    |||||||||||||||||| |||||||| |||| ||||| |||||||||||||||||||    
T  12295 gtaatcgctaatcctggc-aatttacccttgcattgtttaatcatttaaaatttcgtc 12351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 272
Target Start/End: Original strand, 958 - 1032
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtcc 272  Q
    |||||||||| | || |||||||||||||| |||| |||||||| |||| ||||| ||||||||||||||||||||    
T  958 tttaaaaattagtccatgtaatcgctaatcttggc-aatttacccttgcattgtttaatcatttaaaatttcgtcc 1032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 272
Target Start/End: Original strand, 2431 - 2505
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtcc 272  Q
    ||||||||||   ||||||||||||||||||| || |||||||| |||| ||||| ||||||||||||||||||||    
T  2431 tttaaaaattaatccctgtaatcgctaatcctagc-aatttacccttgcattgtttaatcatttaaaatttcgtcc 2505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 221844 - 221902
Alignment:
Q  214 tgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtcc 272  Q
    ||||||||||||||||||| |||||||| |||| ||||| ||||||||||||||||||||    
T  221844 tgtaatcgctaatcctggc-aatttacccttgcattgtttaatcatttaaaatttcgtcc 221902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 272
Target Start/End: Complemental strand, 222217 - 222103
Alignment:
Q  158 taggcttaaatatgtatttgatccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatc 256  Q
    |||||||||  |||| |||  ||||||||| |||| | | |||||||||| |  | ||||||||||||||||| | |||||||| |||| ||||| ||||    
T  222217 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtacatgtaatcgctaatcctgac-aatttacccttgcattgtttaatc 222119  T
Q  257 atttaaaatttcgtcc 272  Q
    ||||||||||||||||    
T  222118 atttaaaatttcgtcc 222103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 274
Target Start/End: Complemental strand, 21347 - 21252
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgct-ttgttaatcatttaaaatttcgtccct 274  Q
    ||||||||| ||| || |||||||||||| | ||||||||| ||||||| |||| ||||||   ||||  ||||||||||||||||||| |||||||    
T  21347 tccttgcaattagaggtcgtttaaaaattcgtccctgtaattgctaatcatggc-aatttagtcttgcaattgttaatcatttaaaattccgtccct 21252  T

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Target: scaffold0205; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 267
Target Start/End: Original strand, 21028 - 21116
Alignment:
Q  179 tccttgcaaatagggggcgtttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgct-ttgttaatcatttaaaattt 267  Q
    ||||||||| |||| | | |||||||||| | ||||||||| ||||||||| || |||||| | ||||  ||||||||||||||||||||    
T  21028 tccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgc-aatttagccttgcaattgttaatcatttaaaattt 21116  T

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Target: scaffold0042 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 272
Target Start/End: Complemental strand, 12168 - 12094
Alignment:
Q  198 tttaaaaattgggccctgtaatcgctaatcctggccaatttacctttgctttgtt-aatcatttaaaatttcgtcc 272  Q
    ||||||||||   ||| ||||||||||||||| || |||||||| |||| ||||| ||||||||||||||||||||    
T  12168 tttaaaaattaatcccagtaatcgctaatcctagc-aatttacccttgcattgtttaatcatttaaaatttcgtcc 12094  T

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