View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12783_high_11 (Length: 229)

Name: NF12783_high_11
Description: NF12783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12783_high_11
NF12783_high_11
[»] chr3 (43 HSPs)
chr3 (1-124)||(26653474-26653596)
chr3 (123-227)||(26141529-26141633)
chr3 (123-227)||(53982010-53982114)
chr3 (124-227)||(49607414-49607517)
chr3 (3-124)||(20015871-20015992)
chr3 (121-190)||(20764949-20765018)
chr3 (124-229)||(27714886-27714991)
chr3 (122-227)||(33644198-33644303)
chr3 (124-227)||(33118848-33118951)
chr3 (128-227)||(52629304-52629403)
chr3 (129-227)||(31456694-31456792)
chr3 (124-190)||(51419394-51419460)
chr3 (124-227)||(17470405-17470508)
chr3 (1-124)||(19944039-19944162)
chr3 (1-124)||(24839647-24839770)
chr3 (124-227)||(47531865-47531968)
chr3 (124-227)||(54868892-54868995)
chr3 (124-197)||(11095380-11095453)
chr3 (124-227)||(8076393-8076496)
chr3 (129-227)||(48587088-48587186)
chr3 (124-190)||(11347956-11348022)
chr3 (6-124)||(19858399-19858517)
chr3 (124-189)||(14623874-14623939)
chr3 (51-124)||(19849371-19849444)
chr3 (124-227)||(11907371-11907474)
chr3 (124-227)||(24699951-24700054)
chr3 (124-203)||(35536626-35536705)
chr3 (124-222)||(9562999-9563097)
chr3 (124-209)||(36707439-36707524)
chr3 (115-203)||(13898076-13898164)
chr3 (124-203)||(8956762-8956841)
chr3 (124-227)||(41189761-41189864)
chr3 (122-189)||(45058588-45058654)
chr3 (50-124)||(19956458-19956532)
chr3 (50-124)||(20036273-20036347)
chr3 (127-189)||(26754698-26754760)
chr3 (124-186)||(36331416-36331478)
chr3 (116-203)||(30801754-30801841)
chr3 (124-187)||(41080709-41080771)
chr3 (124-203)||(45320370-45320449)
chr3 (124-227)||(1758453-1758558)
chr3 (124-190)||(21746215-21746283)
chr3 (128-189)||(25395368-25395429)
[»] chr8 (33 HSPs)
chr8 (124-227)||(1179937-1180040)
chr8 (129-227)||(5957835-5957933)
chr8 (124-222)||(37038479-37038577)
chr8 (123-227)||(43414578-43414682)
chr8 (121-227)||(40423940-40424046)
chr8 (123-227)||(15197332-15197436)
chr8 (123-227)||(34012293-34012397)
chr8 (124-227)||(10284628-10284731)
chr8 (124-227)||(12831047-12831150)
chr8 (124-203)||(44507108-44507187)
chr8 (126-227)||(10621084-10621185)
chr8 (122-227)||(15048179-15048283)
chr8 (123-219)||(504126-504222)
chr8 (131-227)||(14547929-14548025)
chr8 (119-227)||(17443820-17443928)
chr8 (123-227)||(23122594-23122698)
chr8 (123-190)||(20074968-20075035)
chr8 (124-187)||(4854900-4854963)
chr8 (1-124)||(11544395-11544518)
chr8 (124-189)||(16383377-16383442)
chr8 (124-189)||(34307216-34307281)
chr8 (144-227)||(8841429-8841512)
chr8 (124-189)||(30479509-30479574)
chr8 (168-227)||(9122229-9122288)
chr8 (124-203)||(14055613-14055692)
chr8 (1-92)||(22689378-22689469)
chr8 (124-187)||(24307629-24307692)
chr8 (124-187)||(24307830-24307893)
chr8 (124-203)||(42221515-42221594)
chr8 (124-189)||(16056436-16056501)
chr8 (124-189)||(32032725-32032789)
chr8 (124-179)||(25838197-25838252)
chr8 (123-227)||(38229428-38229531)
[»] chr5 (25 HSPs)
chr5 (124-227)||(2740274-2740377)
chr5 (123-227)||(28177774-28177878)
chr5 (123-227)||(40145406-40145510)
chr5 (124-227)||(36732939-36733042)
chr5 (129-227)||(18520881-18520979)
chr5 (124-222)||(31008988-31009086)
chr5 (122-227)||(35785197-35785302)
chr5 (123-227)||(26720515-26720619)
chr5 (123-227)||(26990264-26990368)
chr5 (123-227)||(33149635-33149739)
chr5 (123-227)||(42414299-42414403)
chr5 (123-222)||(14831813-14831912)
chr5 (124-220)||(15409614-15409710)
chr5 (124-227)||(6679698-6679801)
chr5 (124-227)||(35943889-35943992)
chr5 (131-229)||(13811659-13811757)
chr5 (124-189)||(2252203-2252268)
chr5 (124-189)||(3921300-3921365)
chr5 (124-203)||(9603813-9603892)
chr5 (124-190)||(33825358-33825424)
chr5 (129-183)||(36875644-36875698)
chr5 (121-197)||(6260028-6260104)
chr5 (128-187)||(10356638-10356698)
chr5 (10-124)||(9815368-9815482)
chr5 (124-187)||(39688934-39688997)
[»] chr2 (35 HSPs)
chr2 (124-227)||(17473020-17473123)
chr2 (124-227)||(9058480-9058583)
chr2 (129-227)||(19930817-19930915)
chr2 (124-227)||(7465732-7465835)
chr2 (124-227)||(38273139-38273242)
chr2 (129-227)||(28863460-28863558)
chr2 (123-227)||(40613899-40614003)
chr2 (124-227)||(5574485-5574588)
chr2 (124-227)||(33436097-33436200)
chr2 (121-227)||(40701475-40701581)
chr2 (123-227)||(13438342-13438446)
chr2 (123-227)||(28381652-28381756)
chr2 (124-227)||(10249379-10249482)
chr2 (124-222)||(32505650-32505748)
chr2 (124-227)||(20700815-20700918)
chr2 (124-227)||(30915463-30915566)
chr2 (124-227)||(33436211-33436314)
chr2 (124-190)||(36168836-36168902)
chr2 (122-222)||(4060683-4060783)
chr2 (123-227)||(27864703-27864807)
chr2 (124-227)||(2533124-2533226)
chr2 (124-190)||(17823784-17823850)
chr2 (121-189)||(17820039-17820107)
chr2 (124-203)||(38882835-38882913)
chr2 (124-227)||(42257193-42257296)
chr2 (129-203)||(41575142-41575216)
chr2 (123-189)||(43490120-43490186)
chr2 (124-189)||(15428775-15428840)
chr2 (124-189)||(26891539-26891604)
chr2 (124-189)||(45097770-45097835)
chr2 (124-189)||(13365351-13365418)
chr2 (130-185)||(3439985-3440040)
chr2 (124-227)||(38732354-38732457)
chr2 (125-190)||(44151924-44151990)
chr2 (144-189)||(2997522-2997567)
[»] chr4 (34 HSPs)
chr4 (122-227)||(31910190-31910295)
chr4 (124-227)||(50052425-50052528)
chr4 (122-227)||(6034042-6034147)
chr4 (123-227)||(3481653-3481757)
chr4 (122-222)||(50526173-50526273)
chr4 (121-227)||(11511459-11511565)
chr4 (124-227)||(48183046-48183149)
chr4 (124-227)||(480444-480547)
chr4 (124-227)||(29234242-29234345)
chr4 (123-190)||(40574778-40574845)
chr4 (124-227)||(41236347-41236450)
chr4 (124-227)||(42044364-42044467)
chr4 (124-222)||(28480270-28480368)
chr4 (124-222)||(28481145-28481243)
chr4 (124-222)||(28482020-28482118)
chr4 (121-227)||(54473530-54473636)
chr4 (124-189)||(55475191-55475256)
chr4 (124-227)||(23608235-23608338)
chr4 (124-227)||(24995104-24995207)
chr4 (124-227)||(29239886-29239989)
chr4 (124-227)||(29547956-29548059)
chr4 (124-227)||(29977885-29977988)
chr4 (128-227)||(53352563-53352661)
chr4 (124-190)||(47104544-47104610)
chr4 (124-189)||(8343198-8343263)
chr4 (124-189)||(19670751-19670816)
chr4 (163-227)||(41823921-41823985)
chr4 (124-227)||(48647723-48647826)
chr4 (124-189)||(32766958-32767023)
chr4 (124-189)||(47986208-47986273)
chr4 (124-189)||(50813927-50813992)
chr4 (124-189)||(55079749-55079814)
chr4 (128-200)||(18769113-18769185)
chr4 (144-189)||(17983778-17983823)
[»] chr1 (31 HSPs)
chr1 (122-227)||(9474873-9474978)
chr1 (124-227)||(32813247-32813350)
chr1 (123-222)||(37649197-37649296)
chr1 (124-222)||(51898685-51898783)
chr1 (124-227)||(38632318-38632421)
chr1 (124-222)||(2581915-2582013)
chr1 (123-227)||(27564732-27564836)
chr1 (123-227)||(47452317-47452421)
chr1 (121-227)||(48716279-48716385)
chr1 (123-227)||(26440733-26440837)
chr1 (124-227)||(3000319-3000422)
chr1 (124-227)||(41758805-41758908)
chr1 (129-227)||(44548373-44548471)
chr1 (124-227)||(43132-43235)
chr1 (124-227)||(38595154-38595257)
chr1 (124-227)||(49811524-49811627)
chr1 (121-189)||(41608528-41608596)
chr1 (121-189)||(50591035-50591103)
chr1 (124-227)||(8346385-8346488)
chr1 (124-227)||(50630458-50630561)
chr1 (124-190)||(23597125-23597191)
chr1 (129-227)||(26274437-26274535)
chr1 (124-190)||(37926472-37926538)
chr1 (129-222)||(11152380-11152472)
chr1 (124-227)||(5958997-5959100)
chr1 (124-227)||(45044557-45044660)
chr1 (123-203)||(3302554-3302634)
chr1 (125-227)||(44453980-44454082)
chr1 (123-185)||(6260869-6260931)
chr1 (154-203)||(13414791-13414840)
chr1 (68-124)||(1717609-1717665)
[»] chr7 (34 HSPs)
chr7 (124-227)||(3434562-3434665)
chr7 (124-227)||(7389389-7389492)
chr7 (124-227)||(4999511-4999614)
chr7 (125-227)||(35522877-35522979)
chr7 (123-227)||(19329841-19329945)
chr7 (123-227)||(35137532-35137636)
chr7 (124-227)||(19436184-19436287)
chr7 (124-227)||(40957707-40957810)
chr7 (129-227)||(3694372-3694470)
chr7 (129-227)||(3784000-3784098)
chr7 (121-227)||(38267037-38267143)
chr7 (124-190)||(46374836-46374902)
chr7 (123-180)||(31735883-31735940)
chr7 (124-227)||(8080380-8080483)
chr7 (124-227)||(36361910-36362013)
chr7 (124-227)||(38837217-38837320)
chr7 (124-227)||(36362026-36362129)
chr7 (129-227)||(32951490-32951588)
chr7 (124-190)||(46033835-46033901)
chr7 (123-227)||(8238211-8238316)
chr7 (121-189)||(32564461-32564529)
chr7 (123-190)||(21234400-21234467)
chr7 (124-227)||(40846110-40846213)
chr7 (124-189)||(22343361-22343426)
chr7 (124-187)||(26296644-26296707)
chr7 (124-227)||(38044197-38044300)
chr7 (124-185)||(35468894-35468955)
chr7 (124-189)||(36208173-36208238)
chr7 (124-189)||(41915741-41915806)
chr7 (124-192)||(10343595-10343663)
chr7 (122-190)||(39255957-39256025)
chr7 (122-189)||(41423680-41423747)
chr7 (124-190)||(18207180-18207246)
chr7 (124-190)||(45223042-45223108)
[»] scaffold1268 (1 HSPs)
scaffold1268 (123-227)||(926-1030)
[»] scaffold1267 (1 HSPs)
scaffold1267 (123-227)||(926-1030)
[»] chr6 (20 HSPs)
chr6 (131-227)||(32869685-32869781)
chr6 (124-227)||(29857827-29857930)
chr6 (124-227)||(31976248-31976351)
chr6 (129-227)||(22880655-22880753)
chr6 (124-227)||(11427616-11427721)
chr6 (123-227)||(17598553-17598657)
chr6 (124-227)||(6209462-6209565)
chr6 (121-189)||(15508059-15508127)
chr6 (124-189)||(15990077-15990142)
chr6 (124-189)||(30341395-30341460)
chr6 (121-197)||(31109427-31109503)
chr6 (123-227)||(31953027-31953131)
chr6 (128-227)||(9379709-9379808)
chr6 (129-227)||(28536485-28536581)
chr6 (124-190)||(31110795-31110859)
chr6 (121-227)||(4231545-4231651)
chr6 (163-227)||(23128124-23128188)
chr6 (131-197)||(946383-946449)
chr6 (124-190)||(12732482-12732548)
chr6 (124-227)||(15832577-15832680)
[»] scaffold0237 (1 HSPs)
scaffold0237 (124-227)||(4029-4132)
[»] scaffold0110 (1 HSPs)
scaffold0110 (121-203)||(8884-8966)
[»] scaffold0321 (1 HSPs)
scaffold0321 (124-203)||(10130-10209)
[»] scaffold0018 (1 HSPs)
scaffold0018 (151-227)||(152525-152601)


Alignment Details
Target: chr3 (Bit Score: 96; Significance: 3e-47; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 26653474 - 26653596
Alignment:
Q  1 tgcaaccacaacccaagttgatcaattgtgaagaccattcattgttgaagtggcataaggttatgcccttgaaaattgacaacgtgaggttggcattaga 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| | |||| |||| |||||||||||||||||    
T  26653474 tgcaaccacaacccaagttgatcaatagtgaagaccattcattgttgaggtggcataaggttatgccctt-ataatttacaatgtgaggttggcattaga 26653572  T
Q  101 ctcagcaattgatgattttctttg 124  Q
    ||||||||||||||||||||||||    
T  26653573 ctcagcaattgatgattttctttg 26653596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 123 - 227
Target Start/End: Complemental strand, 26141633 - 26141529
Alignment:
Q  123 tgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacacttt 222  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| | ||||  ||||  || ||||| ||||||||    
T  26141633 tgagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcacacttt 26141534  T
Q  223 ttctt 227  Q
     ||||    
T  26141533 ctctt 26141529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 123 - 227
Target Start/End: Original strand, 53982010 - 53982114
Alignment:
Q  123 tgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacacttt 222  Q
    ||||| |||||||||||||| |||||| ||||||||||| |||| ||||||||||||||||||||||| |||||| |||||  |||||||| ||||||||    
T  53982010 tgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 53982109  T
Q  223 ttctt 227  Q
     ||||    
T  53982110 ctctt 53982114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 49607414 - 49607517
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| |||||||||||||| |||||| ||||||||||| |||| ||||||||||||||||||||||| |||||| |||||| || ||||| ||||||||     
T  49607414 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacactttc 49607513  T
Q  224 tctt 227  Q
    ||||    
T  49607514 tctt 49607517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 124
Target Start/End: Complemental strand, 20015992 - 20015871
Alignment:
Q  3 caaccacaacccaagttgatcaattgtgaagaccattcattgttgaagtggcataaggttatgcccttgaaaattgacaacgtgaggttggcattagact 102  Q
    ||||||||||||| ||||||||||  |||||||| || |||||| | |||||||||||||  | | |||||||||||||| || | | ||||||||||||    
T  20015992 caaccacaacccatgttgatcaatcatgaagaccctttattgtttaggtggcataaggttcaggctttgaaaattgacaatgttatggtggcattagact 20015893  T
Q  103 cagcaattgatgattttctttg 124  Q
    |||| |||||||||||||||||    
T  20015892 cagctattgatgattttctttg 20015871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 121 - 190
Target Start/End: Complemental strand, 20765018 - 20764949
Alignment:
Q  121 tttgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacac 190  Q
    |||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  20765018 tttgagttatgagacatagacatccttaggtggtaatacactctttaacacccacacaaaaatctgacac 20764949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 124 - 229
Target Start/End: Complemental strand, 27714991 - 27714886
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| |||||||||||||| | |||| ||| ||||||| |||| ||||||||||||||||||||||| ||||||||||||  |||||||| ||||||||     
T  27714991 gagtaatgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttc 27714892  T
Q  224 tcttct 229  Q
    ||||||    
T  27714891 tcttct 27714886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 33644198 - 33644303
Alignment:
Q  122 ttgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactt 221  Q
    |||||| |||||||||||||| |||| | ||||||||||| |||| ||||||||||||||||||||||| |||||| |||||  |||||||| |||||||    
T  33644198 ttgagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 33644297  T
Q  222 tttctt 227  Q
    | ||||    
T  33644298 tctctt 33644303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 33118951 - 33118848
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    ||||||||||||||||||| |||||| || |||||||| |||| |||||||||||||||| |||||| |||||| |||||| || || |||||||||||     
T  33118951 gagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatccctcagaaacacactttc 33118852  T
Q  224 tctt 227  Q
    ||||    
T  33118851 tctt 33118848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 128 - 227
Target Start/End: Original strand, 52629304 - 52629403
Alignment:
Q  128 tatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttttctt 227  Q
    ||||||||||||||| |||||| ||||||||||| |||| ||||||||||||||||||||||| |||||| |||||  ||| |||| |||||||| ||||    
T  52629304 tatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctctt 52629403  T

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Target: chr3; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 129 - 227
Target Start/End: Original strand, 31456694 - 31456792
Alignment:
Q  129 atgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttttctt 227  Q
    |||||||||||||| || |||  |||||||||| |||| ||||||||||||||||||||||| ||||||||||||  |||||||| |||||||| ||||    
T  31456694 atgatacatagacacccataggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctctt 31456792  T

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Target: chr3; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 124 - 190
Target Start/End: Complemental strand, 51419460 - 51419394
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacac 190  Q
    ||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  51419460 gagttatgatacatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacac 51419394  T

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Target: chr3; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 17470405 - 17470508
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| |||||||||||||| | |||| |||||||||||  ||||||||||||||||||||||||||| |||||| |||||  || ||||| ||||||||     
T  17470405 gagtaatgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 17470504  T
Q  224 tctt 227  Q
    ||||    
T  17470505 tctt 17470508  T

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Target: chr3; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 19944039 - 19944162
Alignment:
Q  1 tgcaaccacaacccaagttgatcaattgtgaagaccattcattgttgaagtggcataaggttatgcccttgaaaattgacaacgtgaggttggcattaga 100  Q
    |||| |||||||| ||||||||||||  || |||||||  |||||||| ||||||||| |||| | |||||||||||||||| ||| |||||||||||||    
T  19944039 tgcagccacaaccaaagttgatcaataatggagaccatgtattgttgaggtggcataatgttaaggccttgaaaattgacaatgtggggttggcattaga 19944138  T
Q  101 ctcagcaattgatgattttctttg 124  Q
     ||||| ||  |||||||| ||||    
T  19944139 ttcagctatcaatgattttatttg 19944162  T

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Target: chr3; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 24839770 - 24839647
Alignment:
Q  1 tgcaaccacaacccaagttgatcaattgtgaagaccattcattgttgaagtggcataaggttatgcccttgaaaattgacaacgtgaggttggcattaga 100  Q
    |||| |||||||||||||||  ||||  |  |||||||  |||||||| ||||||||| |||| | |||||||||||||||| |||||||||||||||||    
T  24839770 tgcagccacaacccaagttgggcaataatcgagaccatgtattgttgaggtggcataatgttaaggccttgaaaattgacaatgtgaggttggcattaga 24839671  T
Q  101 ctcagcaattgatgattttctttg 124  Q
    |||||  || ||||||||| ||||    
T  24839670 ctcagtcatcgatgattttatttg 24839647  T

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Target: chr3; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 47531865 - 47531968
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||| |||||||| |||||||||| | | ||| || |  |||||||| ||||||||     
T  47531865 gagttatgatacatagacatccttagatggcaatacaccttttaacatccacacaagaatctgacacgtggccatatgaaccccgcacaagcacactttc 47531964  T
Q  224 tctt 227  Q
    ||||    
T  47531965 tctt 47531968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 54868995 - 54868892
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| |||||||||||||| |||||| |||||||||||  ||| ||||||||||||||||||||||| |||| | |||||  |||||||| ||||||||     
T  54868995 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttc 54868896  T
Q  224 tctt 227  Q
    ||||    
T  54868895 tctt 54868892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 11095453 - 11095380
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtca 197  Q
    |||| |||||||||||||| |||||| ||||||||||| |||| ||||||||||||||||||||||| ||||||    
T  11095453 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtca 11095380  T

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Target: chr3; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 8076393 - 8076496
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| |||||||||| ||| |||||| ||||| ||||| |||| |||||||||||||||||| |||| |||||| |||||  |||||||| ||||||||     
T  8076393 gagtaatgatacataaacacccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttc 8076492  T
Q  224 tctt 227  Q
    ||||    
T  8076493 tctt 8076496  T

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Target: chr3; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 48587186 - 48587088
Alignment:
Q  129 atgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttttctt 227  Q
    |||||||||||| | |||||| ||||||||||| |||| ||||| ||| ||||||||||||| |||||| |||||| ||||||||  ||||||| ||||    
T  48587186 atgatacatagatacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaagtacactttctctt 48587088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 190
Target Start/End: Complemental strand, 11348022 - 11347956
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacac 190  Q
    |||||||||||||||||||||||||| || |||||||  |||| ||| |||||||||||||||||||    
T  11348022 gagttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacac 11347956  T

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Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 124
Target Start/End: Original strand, 19858399 - 19858517
Alignment:
Q  6 ccacaacccaagttgatcaattgtgaagaccattcattgttgaagtggcataaggttatgcccttgaaaattgacaacgtgaggttggcattagactcag 105  Q
    |||||||||| |||||||||   || ||| | || |||||| | |||||||||||||| | |||||||| ||||||| || | ||||||||||||||| |    
T  19858399 ccacaacccatgttgatcaagcatggagaacctttattgtttaggtggcataaggttaaggccttgaaagttgacaatgttaagttggcattagactcgg 19858498  T
Q  106 caattgatgattttctttg 124  Q
    | |||||||||||| ||||    
T  19858499 ctattgatgattttatttg 19858517  T

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Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 124 - 189
Target Start/End: Complemental strand, 14623939 - 14623874
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgaca 189  Q
    |||| ||||||||||||||||||||| ||||||||||| | || ||||||||| ||||||||||||    
T  14623939 gagtaatgatacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgaca 14623874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 19849371 - 19849444
Alignment:
Q  51 tggcataaggttatgcccttgaaaattgacaacgtgaggttggcattagactcagcaattgatgattttctttg 124  Q
    ||||||||||||  | |||||||||||||||| || ||||||||||||||||| || || ||||||||||||||    
T  19849371 tggcataaggttcaggccttgaaaattgacaatgttaggttggcattagactcggctatggatgattttctttg 19849444  T

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Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 11907371 - 11907474
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    ||||||||||||||||||| |||||| || |||||||| | | ||||| |||||||||||||||||  | ||||| ||||  |||||||| |||| |||     
T  11907371 gagttatgatacatagacacccttaggtgacaatacacacctgaacactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcacattttc 11907470  T
Q  224 tctt 227  Q
    ||||    
T  11907471 tctt 11907474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 24700054 - 24699951
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| ||||||||||||||||||||| |||||||||||  ||| ||||||||| ||||||||| ||| | | || |||||  | | |||||||||||||     
T  24700054 gagtaatgatacatagacatccttagttggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggaccctgtacaaacacactttc 24699955  T
Q  224 tctt 227  Q
    ||||    
T  24699954 tctt 24699951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 124 - 203
Target Start/End: Original strand, 35536626 - 35536705
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtgga 203  Q
    |||| ||||||||||||||||||||  |||||||||||  ||| ||||||||| |||||| |||||| | ||||||||||    
T  35536626 gagtaatgatacatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacacgtggtcatgtgga 35536705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 222
Target Start/End: Original strand, 9562999 - 9563097
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacacttt 222  Q
    |||| |||||||||| ||| | ||||||| |||||||  |||| ||| ||| | ||||||||||||| |||||| |||||| | |||||||||||||||    
T  9562999 gagtaatgatacataaacaccattagatgacaatacaacctttgacatccatataaaaatctgacacgtagtcacgtggatcctgcacaaacacacttt 9563097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 209
Target Start/End: Complemental strand, 36707524 - 36707439
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgc 209  Q
    |||| |||||||||||| | |||||| || |||||||| |||| ||| ||||||||||||||||||| |||| | |||||| ||||    
T  36707524 gagtaatgatacatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgacacgtagttacgtggatcccgc 36707439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 115 - 203
Target Start/End: Complemental strand, 13898164 - 13898076
Alignment:
Q  115 attttctttgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtgga 203  Q
    ||||| ||| ||| |||||| ||| |||||||||| ||||||||||| | || ||||||||| ||||||||||||| |  |||||||||    
T  13898164 atttttttttagtaatgatagataaacatccttaggtggcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtgga 13898076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 203
Target Start/End: Original strand, 8956762 - 8956841
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtgga 203  Q
    |||| ||||||||||||||||||||  ||||||||||  |||| ||||||||| |||||| |||||| |  |||||||||    
T  8956762 gagtaatgatacatagacatccttatgtggcaatacatcctttgacacccacataaaaatgtgacacgtgttcatgtgga 8956841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 41189864 - 41189761
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    ||||||||||||||| |||||||||| ||||||||||   ||| ||||||||| |||||| |||||| | | ||  ||||  |||||||| ||||||||     
T  41189864 gagttatgatacatatacatccttaggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcacactttc 41189765  T
Q  224 tctt 227  Q
    ||||    
T  41189764 tctt 41189761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 189
Target Start/End: Complemental strand, 45058654 - 45058588
Alignment:
Q  122 ttgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgaca 189  Q
    ||||||||||||||||| ||| |||||| ||||||||||| | || ||||||||| ||||||||||||    
T  45058654 ttgagttatgatacataaacacccttaggtggcaatacac-ccttgacacccacataaaaatctgaca 45058588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 124
Target Start/End: Original strand, 19956458 - 19956532
Alignment:
Q  50 gtggcataaggttatgcccttgaaaattgacaacgtgaggttggcattagactcagcaattgatgattttctttg 124  Q
    |||||||||||||| |||||||| | ||||||| || ||| ||||||||||||| || || ||||| ||||||||    
T  19956458 gtggcataaggttaagcccttgatagttgacaatgttaggatggcattagactcggctatggatgactttctttg 19956532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 124
Target Start/End: Complemental strand, 20036347 - 20036273
Alignment:
Q  50 gtggcataaggttatgcccttgaaaattgacaacgtgaggttggcattagactcagcaattgatgattttctttg 124  Q
    |||||||||||||| ||||||||  |||||||| || ||| ||||||||||||| || || ||||| ||||||||    
T  20036347 gtggcataaggttaagcccttgatgattgacaatgttaggatggcattagactcggctatggatgactttctttg 20036273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 127 - 189
Target Start/End: Original strand, 26754698 - 26754760
Alignment:
Q  127 ttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgaca 189  Q
    ||||||| |||||||| |||||| ||||||||||| |||  ||| ||||||||||||||||||    
T  26754698 ttatgattcatagacacccttaggtggcaatacacccttggacatccacacaaaaatctgaca 26754760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 186
Target Start/End: Complemental strand, 36331478 - 36331416
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctg 186  Q
    ||||||||||||||| ||| |||||||||||||| ||| | || ||| |||||||||||||||    
T  36331478 gagttatgatacataaacacccttagatggcaatgcaccccttgacatccacacaaaaatctg 36331416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 30801841 - 30801754
Alignment:
Q  116 ttttctttgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtgga 203  Q
    |||| ||||||  |||||||||||||| |||||| ||  ||||||| |||| | |||||||||||||| |||||  ||||||| ||||    
T  30801841 ttttttttgagcaatgatacatagacacccttaggtgataatacaccctttgatacccacacaaaaatatgacatgtagtcatatgga 30801754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 187
Target Start/End: Original strand, 41080709 - 41080771
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctga 187  Q
    |||| ||||||||||||||||||||| | |||| |||| |||| |||||||| |||||||||||    
T  41080709 gagtaatgatacatagacatccttag-tagcaaaacaccctttgacacccacgcaaaaatctga 41080771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 203
Target Start/End: Original strand, 45320370 - 45320449
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtgga 203  Q
    |||||||| || || |||| |||||  || |||||||||| ||||||| ||||||||||||||| || |||| |||||||    
T  45320370 gagttatgttaaattgacaaccttaagtgacaatacactcattaacactcacacaaaaatctgatacgtagttatgtgga 45320449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 1758558 - 1758453
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactct--ttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactt 221  Q
    |||||||||||||||| || || ||| | ||||||||| |   || |||||||||||||||||||||| || || | ||||| ||| |||||||||| ||    
T  1758558 gagttatgatacatagtcaaccataggttgcaatacaccccccttgacacccacacaaaaatctgacatatggttacgtggactccacacaaacacattt 1758459  T
Q  222 tttctt 227  Q
    | ||||    
T  1758458 tctctt 1758453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 190
Target Start/End: Complemental strand, 21746283 - 21746215
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacaccc--acacaaaaatctgacac 190  Q
    |||| |||||||||| |||||||||| |||||||||| || |  ||||||  |||||||||||||||||    
T  21746283 gagtaatgatacatatacatccttaggtggcaatacattcctggacacccccacacaaaaatctgacac 21746215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 189
Target Start/End: Complemental strand, 25395429 - 25395368
Alignment:
Q  128 tatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgaca 189  Q
    ||||||||||| |||||||||  |||| |||||  | |||| ||||||||||||||||||||    
T  25395429 tatgatacataaacatccttatgtggccatacatcccttaatacccacacaaaaatctgaca 25395368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 2e-30; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 1180040 - 1179937
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| |||||||||||||| |||||| ||| ||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||     
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcacactttc 1179941  T
Q  224 tctt 227  Q
    ||||    
T  1179940 tctt 1179937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 129 - 227
Target Start/End: Original strand, 5957835 - 5957933
Alignment:
Q  129 atgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttttctt 227  Q
    ||||||||||||||| ||||| ||||||||||| |||| ||||||||||||||||||||||| |||||| |||||| |||||||| |||||||| ||||    
T  5957835 atgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcacactttctctt 5957933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 124 - 222
Target Start/End: Original strand, 37038479 - 37038577
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacacttt 222  Q
    |||| |||||||||||||||| |||| ||||||||||| |||| ||||||||||||||||||||||| |||||| |||||| |||||||| ||||||||    
T  37038479 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 37038577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 123 - 227
Target Start/End: Complemental strand, 43414682 - 43414578
Alignment:
Q  123 tgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacacttt 222  Q
    |||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||| |||| | ||||  ||||| |||||||| ||||||||    
T  43414682 tgagttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcacacttt 43414583  T
Q  223 ttctt 227  Q
     ||||    
T  43414582 ctctt 43414578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 121 - 227
Target Start/End: Complemental strand, 40424046 - 40423940
Alignment:
Q  121 tttgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacact 220  Q
    ||||||| |||||||||||| | |||||| ||||||||||| |||| ||| ||||||||||||||||||| ||||||||||||  |||||||| ||||||    
T  40424046 tttgagtaatgatacatagatacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacact 40423947  T
Q  221 ttttctt 227  Q
    || ||||    
T  40423946 ttctctt 40423940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 123 - 227
Target Start/End: Original strand, 15197332 - 15197436
Alignment:
Q  123 tgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacacttt 222  Q
    ||||| ||||||||||||||  ||||| ||||||||||| |||| ||||||||||||||||||||||| |||||| |||||  |||||||| ||||||||    
T  15197332 tgagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 15197431  T
Q  223 ttctt 227  Q
     ||||    
T  15197432 ctctt 15197436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 123 - 227
Target Start/End: Complemental strand, 34012397 - 34012293
Alignment:
Q  123 tgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacacttt 222  Q
    ||||| |||||||||||||| |||||| ||| ||||||| |||| |||||||||||||||| |||||| |||||| |||||| |||||||| ||||||||    
T  34012397 tgagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacacttt 34012298  T
Q  223 ttctt 227  Q
     ||||    
T  34012297 ctctt 34012293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 10284731 - 10284628
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    ||||||||||||||||||| |||||  || ||||||||||||| |||||||||||||||| |||||| |||||| |||||  |||||||| ||||||||     
T  10284731 gagttatgatacatagacacccttaagtgacaatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcacactttc 10284632  T
Q  224 tctt 227  Q
    ||||    
T  10284631 tctt 10284628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 12831047 - 12831150
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| |||||||||||||| |||||| || |||||||| |||| ||||||||||||||||||||||| |||||| |||||  |||||||| ||||||||     
T  12831047 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 12831146  T
Q  224 tctt 227  Q
    ||||    
T  12831147 tctt 12831150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 124 - 203
Target Start/End: Complemental strand, 44507187 - 44507108
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtgga 203  Q
    |||| |||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||| |||||| |||||    
T  44507187 gagtaatgatacatagacacccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtagtcacgtgga 44507108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 10621185 - 10621084
Alignment:
Q  126 gttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttttc 225  Q
    |||||||||||||||||||||||| ||| ||||||| |||| ||||||||||||||||||||||| ||| ||  | ||| |||||||| |||||||| ||    
T  10621185 gttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcacactttctc 10621086  T
Q  226 tt 227  Q
    ||    
T  10621085 tt 10621084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 15048283 - 15048179
Alignment:
Q  122 ttgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactt 221  Q
    |||||||||||||||||||||||||||| ||||||||||| |||| ||| ||||||||||||||||||| ||| ||  ||||  |||||||| |||||||    
T  15048283 ttgagttatgatacatagacatccttaggtggcaatacaccctttgaca-ccacacaaaaatctgacacgtagccacatggaccccgcacaagcacactt 15048185  T
Q  222 tttctt 227  Q
    | ||||    
T  15048184 tctctt 15048179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 123 - 219
Target Start/End: Complemental strand, 504222 - 504126
Alignment:
Q  123 tgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacac 219  Q
    ||||| |||||||||||||| |||||| |||||||||||  ||| ||||||||||||||||||||||| |||||| |||||  |||||||| |||||    
T  504222 tgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 504126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 131 - 227
Target Start/End: Original strand, 14547929 - 14548025
Alignment:
Q  131 gatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttttctt 227  Q
    |||||||||||| |||||| |||||||||||  ||| ||||||||||||||||||||||| |||||| |||||  |||||||| |||||||| ||||    
T  14547929 gatacatagacacccttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctctt 14548025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 119 - 227
Target Start/End: Original strand, 17443820 - 17443928
Alignment:
Q  119 tctttgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacaca 218  Q
    |||| ||||||||||||||||||| |||||| || |||||||||  ||||||| |||||||||||||||||  ||||||||||||  || |||||| |||    
T  17443820 tcttagagttatgatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaagaca 17443919  T
Q  219 ctttttctt 227  Q
    |||| ||||    
T  17443920 ctttctctt 17443928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 227
Target Start/End: Complemental strand, 23122698 - 23122594
Alignment:
Q  123 tgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacacttt 222  Q
    ||||| |||||||||||||| |||||  |||||||||||  ||| ||||||||||||||||||||||| |||||| |||||  ||||| || ||||||||    
T  23122698 tgagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcacacttt 23122599  T
Q  223 ttctt 227  Q
     ||||    
T  23122598 ctctt 23122594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 190
Target Start/End: Complemental strand, 20075035 - 20074968
Alignment:
Q  123 tgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacac 190  Q
    ||||| ||||||||||||||||||||| |||||||||||||||| ||||||||| |||||| ||||||    
T  20075035 tgagtaatgatacatagacatccttaggtggcaatacactctttgacacccacataaaaatgtgacac 20074968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 124 - 187
Target Start/End: Complemental strand, 4854963 - 4854900
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctga 187  Q
    |||| ||||||||||||||||||||| ||||||||||| |||||||||| ||| ||||||||||    
T  4854963 gagtaatgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctga 4854900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 11544395 - 11544518
Alignment:
Q  1 tgcaaccacaacccaagttgatcaattgtgaagaccattcattgttgaagtggcataaggttatgcccttgaaaattgacaacgtgaggttggcattaga 100  Q
    |||||||| ||||||||||||||||   || |||||||  | || ||| |||||||  |||||  |||||||||||||| || |||||||||||||||||    
T  11544395 tgcaaccaaaacccaagttgatcaacaatggagaccatgtactgatgaggtggcatttggttaaacccttgaaaattgataatgtgaggttggcattaga 11544494  T
Q  101 ctcagcaattgatgattttctttg 124  Q
     ||||| |  ||||||||||||||    
T  11544495 ttcagctaaggatgattttctttg 11544518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 124 - 189
Target Start/End: Original strand, 16383377 - 16383442
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgaca 189  Q
    ||||||||||||||| ||| |||||| ||||||||||| | || ||||||||||||||||||||||    
T  16383377 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 16383442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 124 - 189
Target Start/End: Original strand, 34307216 - 34307281
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgaca 189  Q
    ||||||||||||||| ||| |||||| ||||||||||| | || ||||||||||||||||||||||    
T  34307216 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 34307281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 144 - 227
Target Start/End: Complemental strand, 8841512 - 8841429
Alignment:
Q  144 ccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttttctt 227  Q
    |||||| ||||| ||||| |||| |||||||||||||||||| |||| |||||| |||||  |||||||| |||||||| ||||    
T  8841512 ccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctctt 8841429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 189
Target Start/End: Complemental strand, 30479574 - 30479509
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgaca 189  Q
    ||||||||||||||| ||| |||||| ||||||||||| |||| ||| ||||| ||||||||||||    
T  30479574 gagttatgatacataaacacccttaggtggcaatacaccctttgacatccacataaaaatctgaca 30479509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 9122229 - 9122288
Alignment:
Q  168 acacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttttctt 227  Q
    ||||||||||||||||||||||  |||||| |||||| |||||||| |||||||| ||||    
T  9122229 acacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttctctt 9122288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 203
Target Start/End: Complemental strand, 14055692 - 14055613
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtgga 203  Q
    |||||||||||||| |||| |||||| || |||||||||| || ||| |||||||||||||| |||  |||||| |||||    
T  14055692 gagttatgatacattgacacccttaggtgacaatacactccttgacatccacacaaaaatcttacatgtagtcacgtgga 14055613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 22689469 - 22689378
Alignment:
Q  1 tgcaaccacaacccaagttgatcaattgtgaagaccattcattgttgaagtggcataaggttatgcccttgaaaattgacaacgtgaggttg 92  Q
    |||||||||  |||| |||||||||| |||||||||||  ||| ||||||||||||  |||||   | |||||||||||||| |||||||||    
T  22689469 tgcaaccacggcccatgttgatcaatagtgaagaccatgtattattgaagtggcatttggttaatgctttgaaaattgacaatgtgaggttg 22689378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 187
Target Start/End: Original strand, 24307629 - 24307692
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctga 187  Q
    ||||||||||||||| ||| |||||| ||||||||||  | || ||||||||||||||||||||    
T  24307629 gagttatgatacataaacacccttaggtggcaatacatccattgacacccacacaaaaatctga 24307692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 187
Target Start/End: Complemental strand, 24307893 - 24307830
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctga 187  Q
    ||||||||||||||| ||| |||||| ||||||||||  | || ||||||||||||||||||||    
T  24307893 gagttatgatacataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctga 24307830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 203
Target Start/End: Original strand, 42221515 - 42221594
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtgga 203  Q
    |||| |||||||||| |||||||||| || ||||||| || |  ||||||||||||||||||||||| || |||| ||||    
T  42221515 gagtaatgatacatatacatccttaggtgacaatacattcctggacacccacacaaaaatctgacacgtaatcatatgga 42221594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 189
Target Start/End: Complemental strand, 16056501 - 16056436
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgaca 189  Q
    ||||||||||||||| |||||||||  || |||||||  | || ||||||||||||||||||||||    
T  16056501 gagttatgatacataaacatccttatgtgacaatacatcccttgacacccacacaaaaatctgaca 16056436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 189
Target Start/End: Original strand, 32032725 - 32032789
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgaca 189  Q
    ||||||||||||||| ||| |||||| |||||||||| || || ||| ||||||||||||||||||    
T  32032725 gagttatgatacataaacacccttaggtggcaataca-tccttgacatccacacaaaaatctgaca 32032789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 179
Target Start/End: Original strand, 25838197 - 25838252
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaa 179  Q
    ||||||||||| ||||| |||||||| |||||||||||| ||| ||| ||||||||    
T  25838197 gagttatgataaatagatatccttaggtggcaatacactttttgacatccacacaa 25838252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 227
Target Start/End: Original strand, 38229428 - 38229531
Alignment:
Q  123 tgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacacttt 222  Q
    |||||||||||||||  |||  ||||| ||||||||| ||| | | |||||||||||||||||||||  | |||| |||||||| | |||| |||| |||    
T  38229428 tgagttatgatacatgaacactcttaggtggcaatacgctcctga-cacccacacaaaaatctgacatgtggtcacgtggattctgtacaagcacatttt 38229526  T
Q  223 ttctt 227  Q
     ||||    
T  38229527 ctctt 38229531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 2e-30; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 2740274 - 2740377
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| ||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||| |||||| |||||| |||||||| ||||||||     
T  2740274 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 2740373  T
Q  224 tctt 227  Q
    ||||    
T  2740374 tctt 2740377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 123 - 227
Target Start/End: Original strand, 28177774 - 28177878
Alignment:
Q  123 tgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacacttt 222  Q
    ||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||| | ||||  ||||  |||||||||||||||||    
T  28177774 tgagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacacttt 28177873  T
Q  223 ttctt 227  Q
     ||||    
T  28177874 ctctt 28177878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 123 - 227
Target Start/End: Original strand, 40145406 - 40145510
Alignment:
Q  123 tgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacacttt 222  Q
    ||||| |||||||||||||| |||||| ||||||||||| |||||||| ||||||||||||||||||| |||||| |||||  |||||||| ||||||||    
T  40145406 tgagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 40145505  T
Q  223 ttctt 227  Q
     ||||    
T  40145506 ctctt 40145510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 36733042 - 36732939
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| |||||||||||||| |||||| | ||||||||| |||| |||||||||||||||||||||||||||||| |||||  |||||||| ||||||||     
T  36733042 gagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcacactttc 36732943  T
Q  224 tctt 227  Q
    ||||    
T  36732942 tctt 36732939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 18520979 - 18520881
Alignment:
Q  129 atgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttttctt 227  Q
    |||||||||||||| |||||| ||||||||||| |||| ||||||||||||||||||||||| |||||| |||||  |||||||| |||||||| ||||    
T  18520979 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctctt 18520881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 124 - 222
Target Start/End: Original strand, 31008988 - 31009086
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacacttt 222  Q
    ||||||||||||||| |||||||||| || ||||||| ||||  ||||||||||||||||||||||| |||||| |||||| |||||||| ||||||||    
T  31008988 gagttatgatacataaacatccttaggtgacaatacattcttccacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 31009086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 35785197 - 35785302
Alignment:
Q  122 ttgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactt 221  Q
    |||||| |||||||||||||| |||||| |||||||||||  ||| ||||||||||||||||||||||| |||| | |||||| |||||||| |||||||    
T  35785197 ttgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcacactt 35785296  T
Q  222 tttctt 227  Q
    | ||||    
T  35785297 tctctt 35785302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 123 - 227
Target Start/End: Original strand, 26720515 - 26720619
Alignment:
Q  123 tgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacacttt 222  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||| ||| ||||||||||||| | | ||  ||||| |||||||| ||||||||    
T  26720515 tgagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacacttt 26720614  T
Q  223 ttctt 227  Q
     ||||    
T  26720615 ctctt 26720619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 123 - 227
Target Start/End: Original strand, 26990264 - 26990368
Alignment:
Q  123 tgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacacttt 222  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||| ||| ||||||||||||| | | ||  ||||| |||||||| ||||||||    
T  26990264 tgagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacacttt 26990363  T
Q  223 ttctt 227  Q
     ||||    
T  26990364 ctctt 26990368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 123 - 227
Target Start/End: Complemental strand, 33149739 - 33149635
Alignment:
Q  123 tgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacacttt 222  Q
    ||||| |||||||||||||| |||||| ||| ||||||| |||| |||||||||||||||| |||||| |||||| |||||| |||||||| ||||||||    
T  33149739 tgagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacacttt 33149640  T
Q  223 ttctt 227  Q
     ||||    
T  33149639 ctctt 33149635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 123 - 227
Target Start/End: Complemental strand, 42414403 - 42414299
Alignment:
Q  123 tgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacacttt 222  Q
    ||||| |||||||||||||| |  ||| ||||||||||| |||| ||||||||||||||||||||||| ||||||||||||  |||||||| ||||||||    
T  42414403 tgagtaatgatacatagacaccagtaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacacttt 42414304  T
Q  223 ttctt 227  Q
     ||||    
T  42414303 atctt 42414299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 123 - 222
Target Start/End: Original strand, 14831813 - 14831912
Alignment:
Q  123 tgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacacttt 222  Q
    ||||| ||||||||||||||  ||||| ||||||||||| |||| ||||||||| ||||||||||||| |||||| |||||| |||||||| ||||||||    
T  14831813 tgagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 14831912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 15409710 - 15409614
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacact 220  Q
    |||||||||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||| ||| ||  ||||  |||||||| ||||||    
T  15409710 gagttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcacact 15409614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 6679698 - 6679801
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    ||||||||||||||||||||| |||| |||||||||||  ||| ||||||||||||||||||||||| | ||||  ||||  ||||||||||||| |||     
T  6679698 gagttatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacattttc 6679797  T
Q  224 tctt 227  Q
    ||||    
T  6679798 tctt 6679801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 35943992 - 35943889
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    ||||||||||||||||||| |||||| ||||||||||   ||| ||||||||||||||||||||||| |||| | |||||| || ||||| ||||||||     
T  35943992 gagttatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcacactttc 35943893  T
Q  224 tctt 227  Q
    ||||    
T  35943892 tctt 35943889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 131 - 229
Target Start/End: Original strand, 13811659 - 13811757
Alignment:
Q  131 gatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttttcttct 229  Q
    |||||||||||| |||||| ||||||||||   ||| ||||||||||||||||||||||| |||||| |||||  |||||||| |||||||| ||||||    
T  13811659 gatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttct 13811757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 189
Target Start/End: Complemental strand, 2252268 - 2252203
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgaca 189  Q
    ||||||||||||||| |||||||||| ||||||||||| | || ||||||||||||||||||||||    
T  2252268 gagttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 2252203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 124 - 189
Target Start/End: Complemental strand, 3921365 - 3921300
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgaca 189  Q
    ||||||||||||||| ||| |||||| ||||||||||| | || ||||||||||||||||||||||    
T  3921365 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 3921300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 124 - 203
Target Start/End: Original strand, 9603813 - 9603892
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtgga 203  Q
    |||| |||||||||| |||||||||| ||  ||||||||| || ||||| ||||||||||||||||||| ||||| ||||    
T  9603813 gagtaatgatacatatacatccttaggtgataatacactcattcacacctacacaaaaatctgacacatggtcatatgga 9603892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 190
Target Start/End: Complemental strand, 33825424 - 33825358
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacac 190  Q
    |||| ||||| ||||||||| ||||| ||||||||||||| || ||||||||| |||||||||||||    
T  33825424 gagtaatgatgcatagacattcttaggtggcaatacactccttgacacccacataaaaatctgacac 33825358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 183
Target Start/End: Complemental strand, 36875698 - 36875644
Alignment:
Q  129 atgatacatagacatccttagatggcaatacactctttaacacccacacaaaaat 183  Q
    |||||||||||||| |||||| ||||||||||| |||| ||||||||||||||||    
T  36875698 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaat 36875644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 6260104 - 6260028
Alignment:
Q  121 tttgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtca 197  Q
    ||||||| |||||||||| ||| || ||| || |||||||| ||||||||||||| ||||||||| |||||| ||||    
T  6260104 tttgagtaatgatacatacacaaccataggtgacaatacaccctttaacacccacgcaaaaatctaacacatggtca 6260028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 10356638 - 10356698
Alignment:
Q  128 tatgatacatagacatccttagatggcaataca-ctctttaacacccacacaaaaatctga 187  Q
    |||||||||||||||||||||| |||||||||| | | || ||||||||||||||||||||    
T  10356638 tatgatacatagacatccttaggtggcaatacatcccattgacacccacacaaaaatctga 10356698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 9815368 - 9815482
Alignment:
Q  10 aacccaagttgatcaattgtgaagaccattcattgttgaagtggcataaggttatgcccttgaaaattgacaacgtgaggttggcattagactcagcaat 109  Q
    |||||| ||||||||||   | ||||| || |||||| | ||| |||||||||  | |||||||||||||||| || | | ||||||||||||| || ||    
T  9815368 aacccatgttgatcaatcacggagaccctttattgtttaggtgacataaggttcaggccttgaaaattgacaatgttaagctggcattagactcggctat 9815467  T
Q  110 tgatgattttctttg 124  Q
     ||||||||||||||    
T  9815468 ggatgattttctttg 9815482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 187
Target Start/End: Complemental strand, 39688997 - 39688934
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctga 187  Q
    ||||||||||||||| ||| |||||  ||||||||||  | || ||||||||||||||||||||    
T  39688997 gagttatgatacataaacacccttaagtggcaatacatcccttgacacccacacaaaaatctga 39688934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 2e-30; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 17473020 - 17473123
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| |||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||| |||||| |||||| |||||||| ||||||||     
T  17473020 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 17473119  T
Q  224 tctt 227  Q
    ||||    
T  17473120 tctt 17473123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 9058480 - 9058583
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| |||||||||||||| |||||| ||||||||||| |||| ||||||||||||||||||||||| ||||||||||||  |||||||| ||||||||     
T  9058480 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttc 9058579  T
Q  224 tctt 227  Q
    ||||    
T  9058580 tctt 9058583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 19930915 - 19930817
Alignment:
Q  129 atgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttttctt 227  Q
    |||||||||||||| |||||| ||||||||||| |||| ||| ||||||||||||||||||| ||||||||||||  ||||||||||||||||| ||||    
T  19930915 atgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacacactttctctt 19930817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 7465835 - 7465732
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| |||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||| |||||| |||||  || ||||| ||||||||     
T  7465835 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 7465736  T
Q  224 tctt 227  Q
    ||||    
T  7465735 tctt 7465732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 38273242 - 38273139
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||| ||  ||||  |||||| | ||||||||     
T  38273242 gagttatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactagcacactttc 38273143  T
Q  224 tctt 227  Q
    ||||    
T  38273142 tctt 38273139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 227
Target Start/End: Original strand, 28863460 - 28863558
Alignment:
Q  129 atgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttttctt 227  Q
    |||||||||||||| |||||| ||||||||||| |||| ||||||||||||||||||||||| |||||| |||||  |||||||| |||||||| ||||    
T  28863460 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctctt 28863558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 123 - 227
Target Start/End: Complemental strand, 40614003 - 40613899
Alignment:
Q  123 tgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacacttt 222  Q
    ||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||| | | ||  ||||  |||||||| ||||||||    
T  40614003 tgagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacacttt 40613904  T
Q  223 ttctt 227  Q
     ||||    
T  40613903 ctctt 40613899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 5574588 - 5574485
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| ||||||||||||||  ||||| ||||||||||| |||| ||||||||| ||||||||||||| |||||| |||||| |||||||| ||||||||     
T  5574588 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 5574489  T
Q  224 tctt 227  Q
    ||||    
T  5574488 tctt 5574485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 33436200 - 33436097
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| |||||||||||||| |||||| ||||||||||| |||| |||||||||||||||||| |||| |||||| |||||  |||||||| ||||||||     
T  33436200 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttc 33436101  T
Q  224 tctt 227  Q
    ||||    
T  33436100 tctt 33436097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 121 - 227
Target Start/End: Original strand, 40701475 - 40701581
Alignment:
Q  121 tttgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacact 220  Q
    ||||||| |||||||||||||| |||||| |||||||||||  ||| ||||||||||||||||||||||| |||| | |||||  |||||||| ||||||    
T  40701475 tttgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacact 40701574  T
Q  221 ttttctt 227  Q
    || ||||    
T  40701575 ttctctt 40701581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 123 - 227
Target Start/End: Original strand, 13438342 - 13438446
Alignment:
Q  123 tgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacacttt 222  Q
    ||||| |||||||||||||| |||||| || |||||||  |||| ||||||||||||||||||||||| |||||| |||||  |||||||| ||||||||    
T  13438342 tgagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 13438441  T
Q  223 ttctt 227  Q
     ||||    
T  13438442 ctctt 13438446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 123 - 227
Target Start/End: Complemental strand, 28381756 - 28381652
Alignment:
Q  123 tgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacacttt 222  Q
    ||||| |||||||||||||| |||||| |||||||||||  ||  ||||||||||||||||||||||| ||||||  |||| ||||||||| ||||||||    
T  28381756 tgagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcacacttt 28381657  T
Q  223 ttctt 227  Q
     ||||    
T  28381656 ctctt 28381652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 10249482 - 10249379
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| |||||||||||||| |||||| || ||||||||  ||| ||||||||||||||||||||||| |||||| |||||  |||||||| ||||||||     
T  10249482 gagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 10249383  T
Q  224 tctt 227  Q
    ||||    
T  10249382 tctt 10249379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 222
Target Start/End: Complemental strand, 32505748 - 32505650
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacacttt 222  Q
    |||| |||||||||||||| |||||| || ||||||||  ||| ||||||||||||||||||||||| |||||| |||||  |||||||| ||||||||    
T  32505748 gagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 32505650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 20700815 - 20700918
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| ||||||||||||||||||||  ||||||||||| |||| || || ||||||||||||||||| |||||| |||||  ||||| || ||||||||     
T  20700815 gagtaatgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttc 20700914  T
Q  224 tctt 227  Q
    ||||    
T  20700915 tctt 20700918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 30915463 - 30915566
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| |||||||||||||| |||||| ||||||||||| |||| || |||||| ||||||||||||| |||||| |||||  ||| |||| ||||||||     
T  30915463 gagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 30915562  T
Q  224 tctt 227  Q
    ||||    
T  30915563 tctt 30915566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 33436211 - 33436314
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| |||||||||||||||||||||||||||||||||  ||| ||||||||| ||||||||||||| |   |||||||| |  |||||| ||||||||     
T  33436211 gagtaatgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgacacgtgaccatgtggactttgcacaagcacactttc 33436310  T
Q  224 tctt 227  Q
    ||||    
T  33436311 tctt 33436314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 190
Target Start/End: Original strand, 36168836 - 36168902
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacac 190  Q
    ||||||||||||||||||||||||||||| |||||||  ||||||| ||||||||||||| ||||||    
T  36168836 gagttatgatacatagacatccttagatgacaatacatcctttaactcccacacaaaaatttgacac 36168902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 122 - 222
Target Start/End: Original strand, 4060683 - 4060783
Alignment:
Q  122 ttgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactt 221  Q
    |||||| |||||||||||||| |||||| || ||||||||  ||| ||| ||||||||||||||||||| |||| | |||||| ||||| || |||||||    
T  4060683 ttgagtaatgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactt 4060782  T
Q  222 t 222  Q
    |    
T  4060783 t 4060783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 123 - 227
Target Start/End: Original strand, 27864703 - 27864807
Alignment:
Q  123 tgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacacttt 222  Q
    ||||| |||||||||||||| |||||  ||||||||||| |||| ||| ||||||||||||||||||| || ||| |||||  ||||| || ||||||||    
T  27864703 tgagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcacacttt 27864802  T
Q  223 ttctt 227  Q
     ||||    
T  27864803 ctctt 27864807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 2533124 - 2533226
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||||||||||||||||||||||||  ||||||||||  |||| ||| ||||||||||||||||||| ||| ||  | ||  |||||||| |||||||||    
T  2533124 gagttatgatacatagacatccttaagtggcaatacatcctttgaca-ccacacaaaaatctgacacgtagccacatagaccccgcacaagcacactttt 2533222  T
Q  224 tctt 227  Q
    ||||    
T  2533223 tctt 2533226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 190
Target Start/End: Original strand, 17823784 - 17823850
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacac 190  Q
    |||| |||||||||| |||||||||| |||||||||| || | ||||||||||||||||||||||||    
T  17823784 gagtaatgatacatatacatccttaggtggcaatacattcctgaacacccacacaaaaatctgacac 17823850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 17820107 - 17820039
Alignment:
Q  121 tttgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgaca 189  Q
    |||||||||||||||||||||| |  ||| ||||||||||| | || ||||||||||||||||||||||    
T  17820107 tttgagttatgatacatagacaactataggtggcaatacaccccttgacacccacacaaaaatctgaca 17820039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 124 - 203
Target Start/End: Complemental strand, 38882913 - 38882835
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtgga 203  Q
    |||| |||||||||||||| |||||| |||||||| || |||| ||| ||||||||||||||||||| |||||| |||||    
T  38882913 gagtaatgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgacacgtagtcacgtgga 38882835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 42257193 - 42257296
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    ||||||||||||||||||||| |||| ||||||||||   ||| ||||||||| ||||||||||||| | | ||  ||||  |||||||| ||||||||     
T  42257193 gagttatgatacatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcacactttc 42257292  T
Q  224 tctt 227  Q
    ||||    
T  42257293 tctt 42257296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 41575142 - 41575216
Alignment:
Q  129 atgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtgga 203  Q
    ||||||||||||||||||||||||| ||||||| |||| |||  ||||||||||| |||||  | ||||||||||    
T  41575142 atgatacatagacatccttagatggtaatacaccctttgacattcacacaaaaatttgacatgtggtcatgtgga 41575216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 189
Target Start/End: Original strand, 43490120 - 43490186
Alignment:
Q  123 tgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgaca 189  Q
    |||||||||||||||| ||| |||||| || |||||||| | || ||||||||||||||||||||||    
T  43490120 tgagttatgatacataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgaca 43490186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 189
Target Start/End: Complemental strand, 15428840 - 15428775
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgaca 189  Q
    ||||||||||||||| |||||||||  |||| |||||| | ||||||| |||||||||||||||||    
T  15428840 gagttatgatacataaacatccttatgtggccatacaccccttaacactcacacaaaaatctgaca 15428775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 189
Target Start/End: Complemental strand, 26891604 - 26891539
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgaca 189  Q
    |||||||||||||||| || |||||| ||||||||||| | |  ||||||||||||||||||||||    
T  26891604 gagttatgatacatagccacccttaggtggcaatacacccctagacacccacacaaaaatctgaca 26891539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 189
Target Start/End: Complemental strand, 45097835 - 45097770
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgaca 189  Q
    ||||||||||||||| |||||||||| ||||||||||  | || ||||||| ||||||||||||||    
T  45097835 gagttatgatacataaacatccttaggtggcaatacatcccttgacacccatacaaaaatctgaca 45097770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 189
Target Start/End: Original strand, 13365351 - 13365418
Alignment:
Q  124 gagttatgatacatagacat--ccttagatggcaatacactctttaacacccacacaaaaatctgaca 189  Q
    ||||||||||||||| |||   ||||||||||||||| || | || ||||||||||||||||||||||    
T  13365351 gagttatgatacataaacacacccttagatggcaatataccccttgacacccacacaaaaatctgaca 13365418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 185
Target Start/End: Original strand, 3439985 - 3440040
Alignment:
Q  130 tgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatct 185  Q
    |||||| |||||| |||||| ||||||||||||| |  ||||||||||||||||||    
T  3439985 tgatacgtagacacccttaggtggcaatacactcctggacacccacacaaaaatct 3440040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 38732354 - 38732457
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    ||||||||||||||| ||| |||||  || |||||||  | || ||||||||||||||||||||||  | ||||| ||||  ||||||||  |||||||     
T  38732354 gagttatgatacataaacacccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 38732453  T
Q  224 tctt 227  Q
    ||||    
T  38732454 tctt 38732457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 190
Target Start/End: Original strand, 44151924 - 44151990
Alignment:
Q  125 agttatgatacatagacatccttagatggcaatacactctttaacacccac-acaaaaatctgacac 190  Q
    |||||||||||||||||| |  ||| || ||||||||||||||||||| || | |||||||||||||    
T  44151924 agttatgatacatagacaactataggtgacaatacactctttaacacctacaaaaaaaatctgacac 44151990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 189
Target Start/End: Complemental strand, 2997567 - 2997522
Alignment:
Q  144 ccttagatggcaatacactctttaacacccacacaaaaatctgaca 189  Q
    |||||| ||||||||||| | || ||||||||||||||||||||||    
T  2997567 ccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 2997522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 3e-29; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 31910190 - 31910295
Alignment:
Q  122 ttgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactt 221  Q
    |||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||| ||  ||||  |||||||| |||||||    
T  31910190 ttgagttatgatacatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcacactt 31910289  T
Q  222 tttctt 227  Q
    | ||||    
T  31910290 tctctt 31910295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 50052528 - 50052425
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| ||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||| |||||| |||||  |||||||| ||||||||     
T  50052528 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 50052429  T
Q  224 tctt 227  Q
    ||||    
T  50052428 tctt 50052425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 6034042 - 6034147
Alignment:
Q  122 ttgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactt 221  Q
    |||||| |||||||||||||| |||||| ||||||||||| |||| ||||||||||||||||||||||  |||||| |||||| |||||||| |||||||    
T  6034042 ttgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactt 6034141  T
Q  222 tttctt 227  Q
    | ||||    
T  6034142 tctctt 6034147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 123 - 227
Target Start/End: Original strand, 3481653 - 3481757
Alignment:
Q  123 tgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacacttt 222  Q
    ||||| |||||||||||||| | |||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||  || ||||| ||||||||    
T  3481653 tgagtaatgatacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcacacttt 3481752  T
Q  223 ttctt 227  Q
     ||||    
T  3481753 ctctt 3481757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 122 - 222
Target Start/End: Complemental strand, 50526273 - 50526173
Alignment:
Q  122 ttgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactt 221  Q
    |||||| |||||||||||||||| |||| ||||||||||| |||| ||||||||||||||||||||||| | |||| ||||||||||||||| ||| |||    
T  50526273 ttgagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcacgctt 50526174  T
Q  222 t 222  Q
    |    
T  50526173 t 50526173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 121 - 227
Target Start/End: Complemental strand, 11511565 - 11511459
Alignment:
Q  121 tttgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacact 220  Q
    ||||||| |||||||||||||| |||||| ||||||||||| |||| ||||||||| ||||||||||||| |||||| |||||  |||||||| ||||||    
T  11511565 tttgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacact 11511466  T
Q  221 ttttctt 227  Q
    || ||||    
T  11511465 ttctctt 11511459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 48183149 - 48183046
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| |||||||||||||| |||||  ||||||||||| |||| ||||||||||||||||||||||| |||||| |||||  |||||||| ||||||||     
T  48183149 gagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 48183050  T
Q  224 tctt 227  Q
    ||||    
T  48183049 tctt 48183046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 480547 - 480444
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| |||||||||||||| |||||| || |||||||| |||| ||||||||||||||||||||||| |||||| |||||  ||| |||| ||||||||     
T  480547 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 480448  T
Q  224 tctt 227  Q
    ||||    
T  480447 tctt 480444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 29234345 - 29234242
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| |||||||||||||| |||||||||||||||||| |||| | |||  |||||||||||||||| |||||| |||||  |||||||| ||||||||     
T  29234345 gagtaatgatacatagacacccttagatggcaatacaccctttgataccttcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 29234246  T
Q  224 tctt 227  Q
    ||||    
T  29234245 tctt 29234242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 123 - 190
Target Start/End: Original strand, 40574778 - 40574845
Alignment:
Q  123 tgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacac 190  Q
    ||||||||||||||||||||||||||| ||| ||||||| |||| |||||||||||||||||||||||    
T  40574778 tgagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacac 40574845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 41236347 - 41236450
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| |||||||||||||| |||||| |||||||||||  ||| ||| ||||||||||||||||||| |||||| |||||  |||||||| ||||||||     
T  41236347 gagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 41236446  T
Q  224 tctt 227  Q
    ||||    
T  41236447 tctt 41236450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 42044467 - 42044364
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| |||||||||||||| |||||| ||||||||||  |||  ||||||||||||||||||||||| |||||| |||||  |||||||| ||||||||     
T  42044467 gagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 42044368  T
Q  224 tctt 227  Q
    ||||    
T  42044367 tctt 42044364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 222
Target Start/End: Complemental strand, 28480368 - 28480270
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacacttt 222  Q
    ||||||| ||||||||||| |||||| || |||||||||  ||||||| |||||||||||||||||  ||||||||||||  || ||||||||||||||    
T  28480368 gagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacacttt 28480270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 222
Target Start/End: Complemental strand, 28481243 - 28481145
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacacttt 222  Q
    ||||||| ||||||||||| |||||| || |||||||||  ||||||| |||||||||||||||||  ||||||||||||  || ||||||||||||||    
T  28481243 gagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacacttt 28481145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 222
Target Start/End: Complemental strand, 28482118 - 28482020
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacacttt 222  Q
    ||||||| ||||||||||| |||||| || |||||||||  ||||||| |||||||||||||||||  ||||||||||||  || ||||||||||||||    
T  28482118 gagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacacttt 28482020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 227
Target Start/End: Complemental strand, 54473636 - 54473530
Alignment:
Q  121 tttgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacact 220  Q
    ||||||| |||||||||||||| |||||| || ||||||||  ||| |||||||||||||||||| |||| |||||| |||||  |||||||| ||||||    
T  54473636 tttgagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacact 54473537  T
Q  221 ttttctt 227  Q
    || ||||    
T  54473536 ttatctt 54473530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 124 - 189
Target Start/End: Original strand, 55475191 - 55475256
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgaca 189  Q
    ||||||||||||||| |||||||||| ||||||||||| |||| ||||||||||||||||||||||    
T  55475191 gagttatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgaca 55475256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 23608235 - 23608338
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| |||||| ||||||| ||||||||| ||||||||  ||| ||||||||||||||||||||||| |||||| ||| | ||| ||||| ||||||||     
T  23608235 gagtaatgatatatagacacccttagatgacaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcacactttc 23608334  T
Q  224 tctt 227  Q
    ||||    
T  23608335 tctt 23608338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 24995207 - 24995104
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| |||||| || |||| |||||||||||||||||| |||| ||||||||| |||||| |||||| |||||| |||||  |||||||| |||| |||     
T  24995207 gagtaatgatatatggacacccttagatggcaatacaccctttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcacattttc 24995108  T
Q  224 tctt 227  Q
    ||||    
T  24995107 tctt 24995104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 29239886 - 29239989
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| |||||||||||||| |||||| |||||||||||  ||| ||| |||||||||||||| |||| |||||| |||||  || ||||| ||||||||     
T  29239886 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacactttc 29239985  T
Q  224 tctt 227  Q
    ||||    
T  29239986 tctt 29239989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 29548059 - 29547956
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    ||||||||||||||| |||||||||| ||||||||||  | || ||||||||||||||||||||||  | | ||| ||||| ||||| ||  ||||||||    
T  29548059 gagttatgatacataaacatccttaggtggcaatacatcccttgacacccacacaaaaatctgacatgtggccatatggatcccgcataagtacactttt 29547960  T
Q  224 tctt 227  Q
    ||||    
T  29547959 tctt 29547956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 29977885 - 29977988
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| |||||||||| | | || ||| ||||||||||| | |||||||||||||||||||||||||| ||||||| ||||  || ||||| ||||||||     
T  29977885 gagtaatgatacatacagaaccataggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcacactttc 29977984  T
Q  224 tctt 227  Q
    ||||    
T  29977985 tctt 29977988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 128 - 227
Target Start/End: Complemental strand, 53352661 - 53352563
Alignment:
Q  128 tatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttttctt 227  Q
    ||||||||||||||| |||||| || ||||||| ||||||||||| ||||||||||||||||| |||| | |||||  |||||||| || ||||| ||||    
T  53352661 tatgatacatagacacccttaggtg-caatacattctttaacacctacacaaaaatctgacacgtagttaagtggaccccgcacaagcatactttctctt 53352563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 190
Target Start/End: Original strand, 47104544 - 47104610
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacac 190  Q
    |||| |||||| |||||||| |||||||| ||||||||||| | |||||||||||||||| ||||||    
T  47104544 gagtaatgatatatagacattcttagatgacaatacactctctgacacccacacaaaaatttgacac 47104610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 189
Target Start/End: Complemental strand, 8343263 - 8343198
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgaca 189  Q
    ||||||||||||||| |||||||||| ||||||||||  |||| ||||| ||| ||||||||||||    
T  8343263 gagttatgatacataaacatccttaggtggcaatacatcctttgacacctacataaaaatctgaca 8343198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 189
Target Start/End: Complemental strand, 19670816 - 19670751
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgaca 189  Q
    ||||||||||||||| ||| |||||| ||||||||||| | || |||| |||||||||||||||||    
T  19670816 gagttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgaca 19670751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 41823921 - 41823985
Alignment:
Q  163 ctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttttctt 227  Q
    |||||||||||||||||||||||||||| ||||||  ||||  |||||||| |||||||| ||||    
T  41823921 ctttaacacccacacaaaaatctgacacgtagtcacatggaccccgcacaagcacactttctctt 41823985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 48647826 - 48647723
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    ||||||||| ||||| |||||||||| |  ||||||||   |||||||||||| |||||||| |||| | |||| ||||| ||||||||| |||| |||     
T  48647826 gagttatgacacataaacatccttaggtaacaatacacctcttaacacccacataaaaatctaacacgtggtcacgtggactccgcacaagcacaatttc 48647727  T
Q  224 tctt 227  Q
    ||||    
T  48647726 tctt 48647723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 189
Target Start/End: Original strand, 32766958 - 32767023
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgaca 189  Q
    ||||||||||||||| |||  ||||| ||||||||||| | || ||||||| ||||||||||||||    
T  32766958 gagttatgatacataaacactcttaggtggcaatacaccccttgacacccatacaaaaatctgaca 32767023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 189
Target Start/End: Original strand, 47986208 - 47986273
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgaca 189  Q
    ||||||||||||||| ||| |||||| ||||||||||  | || ||| ||||||||||||||||||    
T  47986208 gagttatgatacataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgaca 47986273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 189
Target Start/End: Complemental strand, 50813992 - 50813927
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgaca 189  Q
    ||||||||||||||| |||  ||||| ||| ||||||| | || ||||||||||||||||||||||    
T  50813992 gagttatgatacataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgaca 50813927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 189
Target Start/End: Complemental strand, 55079814 - 55079749
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgaca 189  Q
    ||||||||||||||| ||| |||||| |||||||||||   || ||||||| ||||||||||||||    
T  55079814 gagttatgatacataaacacccttaggtggcaatacacctcttgacacccatacaaaaatctgaca 55079749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 18769113 - 18769185
Alignment:
Q  128 tatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgt 200  Q
    ||||||||||| |||||||||  |  | |||||| || ||||||||||||||||||||||||| | |||||||    
T  18769113 tatgatacataaacatccttatgtacccatacaccctctaacacccacacaaaaatctgacacgtggtcatgt 18769185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 189
Target Start/End: Complemental strand, 17983823 - 17983778
Alignment:
Q  144 ccttagatggcaatacactctttaacacccacacaaaaatctgaca 189  Q
    |||||| ||||||||||| | || ||||||||||||||||||||||    
T  17983823 ccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 17983778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 3e-29; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 9474978 - 9474873
Alignment:
Q  122 ttgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactt 221  Q
    |||||| |||||||||||||| |||||| ||||||||||| |||| ||||||||||||||||||||||| |||||| |||||  ||||||||||||||||    
T  9474978 ttgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacacactt 9474879  T
Q  222 tttctt 227  Q
    | ||||    
T  9474878 tctctt 9474873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 32813247 - 32813350
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| | ||||  ||||  |||||||| ||||||||     
T  32813247 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcacactttc 32813346  T
Q  224 tctt 227  Q
    ||||    
T  32813347 tctt 32813350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 123 - 222
Target Start/End: Original strand, 37649197 - 37649296
Alignment:
Q  123 tgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacacttt 222  Q
    ||||| |||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||| | |||| ||| ||||||||||| ||||||||    
T  37649197 tgagtaatgatacatagacatctttaggtggcaatacactctttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcacacttt 37649296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 124 - 222
Target Start/End: Complemental strand, 51898783 - 51898685
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacacttt 222  Q
    |||| |||||||||||||||| |||| ||||||||||| |||| ||||||||||||||||||||||| |||||| |||||| |||||||| ||||||||    
T  51898783 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 51898685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 38632421 - 38632318
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| |||||||||||||| |||||| |||||||||||  ||||||| ||||||||||||||||||| |||||| |||||  |||||||| |||||||||    
T  38632421 gagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttt 38632322  T
Q  224 tctt 227  Q
    ||||    
T  38632321 tctt 38632318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 124 - 222
Target Start/End: Original strand, 2581915 - 2582013
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacacttt 222  Q
    |||| |||||||||||||| |||||| ||||||||||| |||| ||||||||||||||||||||||| |||||| |||||  |||||||| ||||||||    
T  2581915 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 2582013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 123 - 227
Target Start/End: Complemental strand, 27564836 - 27564732
Alignment:
Q  123 tgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacacttt 222  Q
    ||||| ||||||||||||||||||||| |||||||||||  ||| ||||||||||||||||||||||| || ||| |||||  |||||||| ||||||||    
T  27564836 tgagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacacttt 27564737  T
Q  223 ttctt 227  Q
     ||||    
T  27564736 ctctt 27564732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 123 - 227
Target Start/End: Complemental strand, 47452421 - 47452317
Alignment:
Q  123 tgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacacttt 222  Q
    ||||| |||||||||||||| |||||| ||| ||||||| |||| |||||||||||||||||| |||| |||||| |||||| |||||||| ||||||||    
T  47452421 tgagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcacacttt 47452322  T
Q  223 ttctt 227  Q
     ||||    
T  47452321 ctctt 47452317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 121 - 227
Target Start/End: Complemental strand, 48716385 - 48716279
Alignment:
Q  121 tttgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacact 220  Q
    ||||||| |||||||||||||| |||||| |||||||||||  ||| ||| ||||||||||||||||||| |||||| |||||  |||||||| ||||||    
T  48716385 tttgagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 48716286  T
Q  221 ttttctt 227  Q
    || ||||    
T  48716285 ttatctt 48716279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 123 - 227
Target Start/End: Original strand, 26440733 - 26440837
Alignment:
Q  123 tgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacacttt 222  Q
    ||||||| |||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||| | | ||  ||||| ||||| || ||||||||    
T  26440733 tgagttaggatagatagacatccttagatgacaatacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagcacacttt 26440832  T
Q  223 ttctt 227  Q
     ||||    
T  26440833 ctctt 26440837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 3000319 - 3000422
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| |||||||||| ||| |||||| ||||||||||| |||| ||||||||||||||||||||||| |||||| |||||  ||| |||| ||||||||     
T  3000319 gagtaatgatacataaacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 3000418  T
Q  224 tctt 227  Q
    ||||    
T  3000419 tctt 3000422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 41758805 - 41758908
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| |||||||||||||| | ||| |||||||||||| |||| ||| ||||||||||||||||||| ||||||  ||||  |||||||||||||||||     
T  41758805 gagtaatgatacatagacaccattaaatggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacacactttc 41758904  T
Q  224 tctt 227  Q
    ||||    
T  41758905 tctt 41758908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 44548471 - 44548373
Alignment:
Q  129 atgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttttctt 227  Q
    |||||||||||||||| |||| |||||||||||  ||| | ||||||||||||||||||||| |||||| |||||  |||||||| |||||||| ||||    
T  44548471 atgatacatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctctt 44548373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 43132 - 43235
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| ||||||||||||||  |||||  | |||||||  |||| ||||||||||||||||||||||| |||||| ||||| ||||||||| ||||||||     
T  43132 gagtaatgatacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcacactttc 43231  T
Q  224 tctt 227  Q
    ||||    
T  43232 tctt 43235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 38595154 - 38595257
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| |||||||||| ||| | |||| ||||||||||| |||| ||||||||||||||||||||||| |||||| |||||  ||| |||| ||||||||     
T  38595154 gagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 38595253  T
Q  224 tctt 227  Q
    ||||    
T  38595254 tctt 38595257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 49811627 - 49811524
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    ||||||||||| |||||||||||||| || ||||||||  ||| ||| ||||||||||||||||||| ||| ||| | || ||||||||| ||||||||     
T  49811627 gagttatgatagatagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgacacgtagccatatagactccgcacaagcacactttc 49811528  T
Q  224 tctt 227  Q
    ||||    
T  49811527 tctt 49811524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 41608596 - 41608528
Alignment:
Q  121 tttgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgaca 189  Q
    |||||||||||||||||| |||||||||| ||||||||||| | || |||| |||||||||||||||||    
T  41608596 tttgagttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgaca 41608528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 50591103 - 50591035
Alignment:
Q  121 tttgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgaca 189  Q
    |||||||||||||||||| ||| |||||| ||||||||||| | || ||||||||||||||||||||||    
T  50591103 tttgagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 50591035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 8346488 - 8346385
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| ||||||||||| || | |||| |||||||||||  ||| ||||||||||||||||||||||| |||||| |||||  | |||||| ||||||||     
T  8346488 gagtaatgatacatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcacactttc 8346389  T
Q  224 tctt 227  Q
    ||||    
T  8346388 tctt 8346385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 50630458 - 50630561
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| |||||||||||| | |||||| ||||||||||  ||||   ||||||||||||||||||||| |||||| |||||  |||||||| ||||||||     
T  50630458 gagtaatgatacatagatacccttaggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 50630557  T
Q  224 tctt 227  Q
    ||||    
T  50630558 tctt 50630561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 190
Target Start/End: Complemental strand, 23597191 - 23597125
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacac 190  Q
    |||| |||||||||||||||| |||| |||||||||||||||| | ||||||| |||||||||||||    
T  23597191 gagtaatgatacatagacatcattaggtggcaatacactctttgatacccacataaaaatctgacac 23597125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 227
Target Start/End: Original strand, 26274437 - 26274535
Alignment:
Q  129 atgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttttctt 227  Q
    |||||||||||||| |||||  ||||||||||   ||| ||| ||||| |||||||||||||||||||| |||||| | ||||||  ||||||||||||    
T  26274437 atgatacatagacacccttatgtggcaatacatcatttgacatccacagaaaaatctgacacatagtcacgtggatcctgcacaagtacactttttctt 26274535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 190
Target Start/End: Complemental strand, 37926538 - 37926472
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacac 190  Q
    ||||||||||||||||| ||| |||| ||||||||||   ||||||||||||| |||||||||||||    
T  37926538 gagttatgatacatagatatctttaggtggcaatacatcttttaacacccacataaaaatctgacac 37926472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 222
Target Start/End: Complemental strand, 11152472 - 11152380
Alignment:
Q  129 atgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacacttt 222  Q
    |||| ||||||||| |||||| ||||||||||| |||  ||| ||||||||||||||||||| ||||||||| ||  |||||||| ||| ||||    
T  11152472 atgaaacatagaca-ccttaggtggcaatacacccttcgacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaagcacgcttt 11152380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 5959100 - 5958997
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    ||||||||||||||| ||| |||||  |||||||||||   || ||||||||||||||||||||||  | ||||| ||||  ||||||||  |||||||     
T  5959100 gagttatgatacataaacacccttaagtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 5959001  T
Q  224 tctt 227  Q
    ||||    
T  5959000 tctt 5958997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 45044660 - 45044557
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    ||||||||||||||| |  ||||||| |||||||||||  ||| ||||||| ||||||||||||||  ||| ||  ||||  ||||||||||||| |||     
T  45044660 gagttatgatacatacatttccttaggtggcaatacaccatttgacacccatacaaaaatctgacatgtagccacatggaccccgcacaaacacattttc 45044561  T
Q  224 tctt 227  Q
    ||||    
T  45044560 tctt 45044557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 203
Target Start/End: Complemental strand, 3302634 - 3302554
Alignment:
Q  123 tgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtgga 203  Q
    ||||| |||||||||| |||||||||| || ||||| | || |  ||||||||||||||||||||||| || |||| ||||    
T  3302634 tgagtaatgatacatatacatccttaggtgacaatatattcctggacacccacacaaaaatctgacacgtaatcatatgga 3302554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 227
Target Start/End: Original strand, 44453980 - 44454082
Alignment:
Q  125 agttatgatacatagacatccttagatggcaatacactct-ttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||||||||||||||||| | |||  |||||||||| ||| || | ||||||||||||||||||||  | || | |||||| || ||||| |||||||||    
T  44453980 agttatgatacatagacacctttaagtggcaataca-tctcttgatacccacacaaaaatctgacatgtggttacgtggatcccacacaagcacactttt 44454078  T
Q  224 tctt 227  Q
    ||||    
T  44454079 tctt 44454082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 185
Target Start/End: Original strand, 6260869 - 6260931
Alignment:
Q  123 tgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatct 185  Q
    |||||||||||| ||||| |||||||| ||| ||||||| | | |||||||||| ||||||||    
T  6260869 tgagttatgatagatagatatccttaggtggtaatacacccctgaacacccacataaaaatct 6260931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 13414791 - 13414840
Alignment:
Q  154 caatacactctttaacacccacacaaaaatctgacacatagtcatgtgga 203  Q
    |||||||| |||| |||||||||||||||||| |||| |||||| |||||    
T  13414791 caatacaccctttgacacccacacaaaaatctaacacgtagtcacgtgga 13414840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 124
Target Start/End: Original strand, 1717609 - 1717665
Alignment:
Q  68 cttgaaaattgacaacgtgaggttggcattagactcagcaattgatgattttctttg 124  Q
    ||||||||||||  | || |||||| ||||||||||||| |||||||||||| ||||    
T  1717609 cttgaaaattgaagatgttaggttgacattagactcagctattgatgattttatttg 1717665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 4e-28; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 3434562 - 3434665
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| ||||||||||||||||||||| ||||||||||| |||| ||||||||||||||| ||||||| |||||| |||||| |||||||| ||||||||     
T  3434562 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcacactttc 3434661  T
Q  224 tctt 227  Q
    ||||    
T  3434662 tctt 3434665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 7389389 - 7389492
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| |||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||| |||||| |||||  |||||||| ||||||||     
T  7389389 gagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 7389488  T
Q  224 tctt 227  Q
    ||||    
T  7389489 tctt 7389492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 4999614 - 4999511
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| |||||||||||||| ||||||||||||||||||  ||| |||||||||||||||||||| || |||||| |||||  |||||||||||||||||     
T  4999614 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacacactttc 4999515  T
Q  224 tctt 227  Q
    ||||    
T  4999514 tctt 4999511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 125 - 227
Target Start/End: Original strand, 35522877 - 35522979
Alignment:
Q  125 agttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacacttttt 224  Q
    ||||||||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||| | | ||| ||||| |||||||| |||||||| |    
T  35522877 agttatgatacatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcacactttct 35522976  T
Q  225 ctt 227  Q
    |||    
T  35522977 ctt 35522979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 123 - 227
Target Start/End: Original strand, 19329841 - 19329945
Alignment:
Q  123 tgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacacttt 222  Q
    ||||| ||||||||||||||||||||| |||||||||||  ||| ||||||||||||||||||||||| || ||| |||||  |||||||| ||||||||    
T  19329841 tgagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacacttt 19329940  T
Q  223 ttctt 227  Q
     ||||    
T  19329941 ctctt 19329945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 123 - 227
Target Start/End: Original strand, 35137532 - 35137636
Alignment:
Q  123 tgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacacttt 222  Q
    ||||| |||||| ||||||| |||||| ||||||||||| |||| |||||||||||||||||| |||| |||||| |||||  |||||||||||||||||    
T  35137532 tgagtaatgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacacacttt 35137631  T
Q  223 ttctt 227  Q
     ||||    
T  35137632 ctctt 35137636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 19436287 - 19436184
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| ||||||||||||||||||||| || ||||||||  ||| ||||||||||||||||||||||| |||||| |||||| ||||| || ||||||||     
T  19436287 gagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcacactttc 19436188  T
Q  224 tctt 227  Q
    ||||    
T  19436187 tctt 19436184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 40957707 - 40957810
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| ||||||||||||||  ||||| |||||||||||||||| | ||||||||||||||||||||| |||||| |||||| ||| |||| ||||||||     
T  40957707 gagtaatgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcacactttc 40957806  T
Q  224 tctt 227  Q
    ||||    
T  40957807 tctt 40957810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 129 - 227
Target Start/End: Original strand, 3694372 - 3694470
Alignment:
Q  129 atgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttttctt 227  Q
    |||||| ||| ||| |||||| || ||||||||  ||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||| ||||    
T  3694372 atgatatatacacacccttaggtgacaatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcacactttctctt 3694470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 129 - 227
Target Start/End: Original strand, 3784000 - 3784098
Alignment:
Q  129 atgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttttctt 227  Q
    |||||||||||||| |||||| ||||||||||   ||| ||||||||||||||||||||||| |||||| |||||| |||||||| |||||||| ||||    
T  3784000 atgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctctt 3784098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 121 - 227
Target Start/End: Original strand, 38267037 - 38267143
Alignment:
Q  121 tttgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacact 220  Q
    ||||||| |||||||||||||| |||||  || |||||||| |||| ||||||||||||||||||||||| |||||| |||||  |||||||| ||||||    
T  38267037 tttgagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 38267136  T
Q  221 ttttctt 227  Q
    || ||||    
T  38267137 ttctctt 38267143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 124 - 190
Target Start/End: Complemental strand, 46374902 - 46374836
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacac 190  Q
    |||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||    
T  46374902 gagttatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacac 46374836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 31735883 - 31735940
Alignment:
Q  123 tgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaa 180  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  31735883 tgagttatgatacatagacatccttaggtggcaatacactctttaacacccacacaaa 31735940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 8080483 - 8080380
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| |||||||||||||| |||||| ||||||||||| |||| ||||| ||| ||||||||||||| |||||| |||||  |||||||| ||||||||     
T  8080483 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 8080384  T
Q  224 tctt 227  Q
    ||||    
T  8080383 tctt 8080380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 36362013 - 36361910
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| |||||||||||||| |||||| ||||||||||  |||| ||||||||||||||||||||||| |||||| |||||  || ||||| ||||||||     
T  36362013 gagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 36361914  T
Q  224 tctt 227  Q
    ||||    
T  36361913 tctt 36361910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 38837217 - 38837320
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| |||||||||||||| |||||| ||||||||||| |||  ||||| ||||||||||||||||| |||||| |||||  |||||||| ||||||||     
T  38837217 gagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 38837316  T
Q  224 tctt 227  Q
    ||||    
T  38837317 tctt 38837320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 36362026 - 36362129
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| |||||||||||||| |||||| ||| ||||||  |||| ||||||||||||||||||||||| |||||| |||||  || ||||| ||||||||     
T  36362026 gagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 36362125  T
Q  224 tctt 227  Q
    ||||    
T  36362126 tctt 36362129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 32951588 - 32951490
Alignment:
Q  129 atgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttttctt 227  Q
    ||||||||||||||  |||||||| |||||||  |||||||| |||||||||||||| |||| |||||| |||||  |||||||| |||||||| ||||    
T  32951588 atgatacatagacactcttagatgacaatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctctt 32951490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 190
Target Start/End: Complemental strand, 46033901 - 46033835
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacac 190  Q
    ||||||||||||||||| || ||||| ||||||||||| |||||||||||||| |||||||||||||    
T  46033901 gagttatgatacatagatattcttaggtggcaatacaccctttaacacccacataaaaatctgacac 46033835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 123 - 227
Target Start/End: Original strand, 8238211 - 8238316
Alignment:
Q  123 tgagttatgatacatagacatcct-tagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactt 221  Q
    |||||||||||||||| ||| ||| ||| ||||||||||| |||| ||||||||||||||||||||||  ||||||| ||||  ||||||||  ||||||    
T  8238211 tgagttatgatacataaacaccctgtaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaagtacactt 8238310  T
Q  222 tttctt 227  Q
    | ||||    
T  8238311 tctctt 8238316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 32564529 - 32564461
Alignment:
Q  121 tttgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgaca 189  Q
    |||||||||||||||||| |||| ||||| ||||||||||| | || ||||||||||||||||||||||    
T  32564529 tttgagttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgaca 32564461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 123 - 190
Target Start/End: Original strand, 21234400 - 21234467
Alignment:
Q  123 tgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacac 190  Q
    ||||||||||||||||||||||||||| || |||||||| |||| |||| ||||||||||| ||||||    
T  21234400 tgagttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgacac 21234467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 40846213 - 40846110
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    ||||||||||||||| |||||||||| ||||||||||| | || ||| |||||||||||||| |||  |||| || ||||  ||||||||| |||||||     
T  40846213 gagttatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaatctaacatgtagttatatggaccccgcacaaatacactttc 40846114  T
Q  224 tctt 227  Q
    ||||    
T  40846113 tctt 40846110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 124 - 189
Target Start/End: Original strand, 22343361 - 22343426
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgaca 189  Q
    ||||||||||||||| ||| |||||| ||||||||||| | || ||||||||||||||||||||||    
T  22343361 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 22343426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 124 - 187
Target Start/End: Original strand, 26296644 - 26296707
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctga 187  Q
    |||||||||||||||||||||||||| || ||||| || |||||||| ||||| ||||||||||    
T  26296644 gagttatgatacatagacatccttaggtgacaatataccctttaacatccacataaaaatctga 26296707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 38044197 - 38044300
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    ||||||||||||||| ||| |||||| ||||||||||| | || ||| ||||||||||||||||||  ||| ||| ||||  ||||||||  |||||||     
T  38044197 gagttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgacatgtagccatatggaccccgcacaagtacactttc 38044296  T
Q  224 tctt 227  Q
    ||||    
T  38044297 tctt 38044300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 185
Target Start/End: Complemental strand, 35468955 - 35468894
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatct 185  Q
    |||| ||||||||||||||||||||||||||||||||   ||| ||||||||| ||||||||    
T  35468955 gagtaatgatacatagacatccttagatggcaatacatcatttgacacccacataaaaatct 35468894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 189
Target Start/End: Original strand, 36208173 - 36208238
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgaca 189  Q
    ||||||||||||||||||| |||||| ||| |||||| || || ||||||||||||||| ||||||    
T  36208173 gagttatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgaca 36208238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 189
Target Start/End: Original strand, 41915741 - 41915806
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgaca 189  Q
    ||||||||||||||| ||| |||||| ||||||||||| | || ||||| ||||||||||||||||    
T  41915741 gagttatgatacataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgaca 41915806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 10343663 - 10343595
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacat 192  Q
    |||| |||||||||||||| |||||| ||| |||||||   || |||||||||||||||||||||||||    
T  10343663 gagtaatgatacatagacacccttaggtggaaatacacatcttgacacccacacaaaaatctgacacat 10343595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 39256025 - 39255957
Alignment:
Q  122 ttgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacac 190  Q
    ||||||||||||||||||||| |||||| |||||||||||   || | ||||| |||||||||||||||    
T  39256025 ttgagttatgatacatagacaaccttaggtggcaatacaccacttgatacccatacaaaaatctgacac 39255957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 189
Target Start/End: Original strand, 41423680 - 41423747
Alignment:
Q  122 ttgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgaca 189  Q
    ||||||||||||||||||||||| |||||||| |||||||   || ||||  ||||||||||||||||    
T  41423680 ttgagttatgatacatagacatcattagatggtaatacacctcttgacacttacacaaaaatctgaca 41423747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 190
Target Start/End: Original strand, 18207180 - 18207246
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacac 190  Q
    ||||||||||||||||||| |||||| |||||||||||   || ||||||| |||||||||| ||||    
T  18207180 gagttatgatacatagacaaccttaggtggcaatacacctcttgacacccatacaaaaatctaacac 18207246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 190
Target Start/End: Original strand, 45223042 - 45223108
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacac 190  Q
    |||| |||||| ||| |||||||||| |||||||||| |||| |||| | |||||||||||||||||    
T  45223042 gagtaatgatatatatacatccttaggtggcaatacattcttgaacatctacacaaaaatctgacac 45223108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 123 - 227
Target Start/End: Complemental strand, 1030 - 926
Alignment:
Q  123 tgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacacttt 222  Q
    ||||| |||||||||||||||| |||| ||||||||||| |||||||| ||||||||||| ||||||| |||||| ||| || |||||||| ||||||||    
T  1030 tgagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacacttt 931  T
Q  223 ttctt 227  Q
     ||||    
T  930 ctctt 926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 123 - 227
Target Start/End: Complemental strand, 1030 - 926
Alignment:
Q  123 tgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacacttt 222  Q
    ||||| |||||||||||||||| |||| ||||||||||| |||||||| ||||||||||| ||||||| |||||| ||| || |||||||| ||||||||    
T  1030 tgagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacacttt 931  T
Q  223 ttctt 227  Q
     ||||    
T  930 ctctt 926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 6e-24; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 131 - 227
Target Start/End: Original strand, 32869685 - 32869781
Alignment:
Q  131 gatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttttctt 227  Q
    |||||||||||| |||||| ||||||||||| |||| ||||||||||||||||||||||| |||||| |||||  |||||||| |||||||| ||||    
T  32869685 gatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctctt 32869781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 29857827 - 29857930
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| |||||||||||||| | ||||||||||||||||  ||||||||||||||||||||||||||| |||| | |||||| ||||| || ||||||||     
T  29857827 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 29857926  T
Q  224 tctt 227  Q
    ||||    
T  29857927 tctt 29857930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 31976248 - 31976351
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||| | ||||  || |  |||||||| ||||||||     
T  31976248 gagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcacactttc 31976347  T
Q  224 tctt 227  Q
    ||||    
T  31976348 tctt 31976351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 22880753 - 22880655
Alignment:
Q  129 atgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttttctt 227  Q
    |||||||||||||| |||||| ||||||||||| |||| |||||||||||||| |||||||| |||||| |||||  |||||||| |||||||| ||||    
T  22880753 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcacactttctctt 22880655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 11427616 - 11427721
Alignment:
Q  124 gagttatgatacatagacatcct--tagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactt 221  Q
    |||| |||||||||||||| |||  ||| ||||||||||  |||| ||||||||||||||||||||||| |||||| |||||| |||||||| |||||||    
T  11427616 gagtaatgatacatagacaccctcttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 11427715  T
Q  222 tttctt 227  Q
    | ||||    
T  11427716 tctctt 11427721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 227
Target Start/End: Original strand, 17598553 - 17598657
Alignment:
Q  123 tgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacacttt 222  Q
    ||||| |||||||||||||| |||||| ||||||||||   ||| ||||||||||||||||||||||| | |||| |||||  |||||||| ||||||||    
T  17598553 tgagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcacacttt 17598652  T
Q  223 ttctt 227  Q
     ||||    
T  17598653 ctctt 17598657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 6209565 - 6209462
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| |||||||||||||| |||||| |||||||||||| ||| |||| |||||||||||||| ||| |||||| |||||  |||||| | ||||||||     
T  6209565 gagtaatgatacatagacacccttaggtggcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcacactttc 6209466  T
Q  224 tctt 227  Q
    ||||    
T  6209465 tctt 6209462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 15508127 - 15508059
Alignment:
Q  121 tttgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgaca 189  Q
    |||||||||||||||||| ||| |||||| ||||||||||| | || ||||||||||||||||||||||    
T  15508127 tttgagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 15508059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 124 - 189
Target Start/End: Complemental strand, 15990142 - 15990077
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgaca 189  Q
    ||||||||||||||| ||| |||||| ||||||||||| | || ||||||||||||||||||||||    
T  15990142 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 15990077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 124 - 189
Target Start/End: Complemental strand, 30341460 - 30341395
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgaca 189  Q
    ||||||||||||||| ||| |||||| ||||||||||| | || ||||||||||||||||||||||    
T  30341460 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 30341395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 31109503 - 31109427
Alignment:
Q  121 tttgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtca 197  Q
    ||||||| |||||  ||||||| |||||| ||||||||||| |||| ||| ||||||||||||||||||| ||||||    
T  31109503 tttgagtaatgattaatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtca 31109427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 227
Target Start/End: Complemental strand, 31953131 - 31953027
Alignment:
Q  123 tgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacacttt 222  Q
    ||||| |||||| |||||||||||||| ||||||||||| | || ||||||||| ||||||||||||  |  |||||||||   | ||||||||||||||    
T  31953131 tgagtaatgatagatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaaacacacttt 31953032  T
Q  223 ttctt 227  Q
     ||||    
T  31953031 ctctt 31953027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 227
Target Start/End: Complemental strand, 9379808 - 9379709
Alignment:
Q  128 tatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttttctt 227  Q
    ||||||||||||||||||||||||| |||||||  | || ||||||| |||||||| |||||| | | |||||||||  | |||||||||| ||| ||||    
T  9379808 tatgatacatagacatccttagatgacaatacatcccttgacacccatacaaaaatttgacacgtggccatgtggatctcacacaaacacattttctctt 9379709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 28536581 - 28536485
Alignment:
Q  129 atgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttttctt 227  Q
    |||||||||| |||||||||| ||||||||||  | || |||||||||||||||||||||||   ||||||||||  || ||||| |||||||| ||||    
T  28536581 atgatacataaacatccttaggtggcaatacaacccttgacacccacacaaaaatctgacac--ggtcatgtggaccccacacaagcacactttctctt 28536485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 124 - 190
Target Start/End: Complemental strand, 31110859 - 31110795
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacac 190  Q
    |||||||||||||||||||||||||| ||||||||||| |||| |||  | ||||||||||||||||    
T  31110859 gagttatgatacatagacatccttaggtggcaatacaccctttgaca--ctcacaaaaatctgacac 31110795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 227
Target Start/End: Original strand, 4231545 - 4231651
Alignment:
Q  121 tttgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacact 220  Q
    ||||||||||||| |||| ||||| |||| ||||||||||| | ||  |||||||||||||||||||||| | | ||| ||||  ||||||||  |||||    
T  4231545 tttgagttatgattcataaacatcattaggtggcaatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaagtacact 4231644  T
Q  221 ttttctt 227  Q
    || ||||    
T  4231645 ttctctt 4231651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 23128188 - 23128124
Alignment:
Q  163 ctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttttctt 227  Q
    |||| ||||||||||||||||||||||| |||||| |||||| || ||||| |||||||| ||||    
T  23128188 ctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacactttctctt 23128124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 946383 - 946449
Alignment:
Q  131 gatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtca 197  Q
    ||||||||||||||||||| ||  ||||||| |||| ||||| || |||||||||||||| ||||||    
T  946383 gatacatagacatccttaggtgataatacaccctttgacacctacccaaaaatctgacacctagtca 946449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 190
Target Start/End: Original strand, 12732482 - 12732548
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacac 190  Q
    |||| ||||||||||||||| ||||  |||||||| | || || |||||||||||||||||||||||    
T  12732482 gagtaatgatacatagacattcttaagtggcaatataatcattgacacccacacaaaaatctgacac 12732548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 15832577 - 15832680
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| |||||||||||||| | |||| || ||||| |   ||| |||||||||||||||| |||||| |||||| |||||| | ||||||| ||| |||     
T  15832577 gagtaatgatacatagacacctttaggtgacaataaatcatttgacacccacacaaaaatttgacacgtagtcacgtggatcctgcacaaatacattttc 15832676  T
Q  224 tctt 227  Q
    ||||    
T  15832677 tctt 15832680  T

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Target: scaffold0237 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 4029 - 4132
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttt 223  Q
    |||| |||||||||||||| | ||||||||||||||||  ||||||||||||||||||||||||||| |||| | |||||| ||||| || ||||||||     
T  4029 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 4128  T
Q  224 tctt 227  Q
    ||||    
T  4129 tctt 4132  T

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Target: scaffold0110 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 8966 - 8884
Alignment:
Q  121 tttgagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtgga 203  Q
    |||||||||||||| |||||||||||||  || ||||||||| ||| ||| | |||||||||| ||||||||||||| |||||    
T  8966 tttgagttatgatatatagacatccttaagtgacaatacactatttgacatctacacaaaaatttgacacatagtcacgtgga 8884  T

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Target: scaffold0321 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 124 - 203
Target Start/End: Complemental strand, 10209 - 10130
Alignment:
Q  124 gagttatgatacatagacatccttagatggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtgga 203  Q
    ||||||||||||||||||| | |||| ||||||||||  |||| ||| ||||| ||||||||||||| |||||| |||||    
T  10209 gagttatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtgga 10130  T

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Target: scaffold0018 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 152525 - 152601
Alignment:
Q  151 tggcaatacactctttaacacccacacaaaaatctgacacatagtcatgtggattccgcacaaacacactttttctt 227  Q
    ||||||||||| | || ||||||||||||||||||||||  | ||||| ||||| ||||||||| ||||||| ||||    
T  152525 tggcaatacaccccttgacacccacacaaaaatctgacatgtggtcatatggatcccgcacaaatacactttctctt 152601  T

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