View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12787_high_2 (Length: 523)

Name: NF12787_high_2
Description: NF12787
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12787_high_2
NF12787_high_2
[»] chr2 (26 HSPs)
chr2 (19-247)||(34119937-34120165)
chr2 (335-523)||(34119659-34119847)
chr2 (467-523)||(9194437-9194493)
chr2 (467-523)||(30977897-30977953)
chr2 (467-523)||(5031931-5031987)
chr2 (467-523)||(36802904-36802960)
chr2 (467-523)||(6999075-6999131)
chr2 (467-523)||(12889839-12889895)
chr2 (467-523)||(13347822-13347878)
chr2 (467-519)||(28679324-28679376)
chr2 (487-523)||(29449239-29449275)
chr2 (467-523)||(35589394-35589450)
chr2 (467-522)||(13765408-13765463)
chr2 (467-522)||(14233727-14233782)
chr2 (467-522)||(39449275-39449330)
chr2 (467-521)||(4299535-4299589)
chr2 (489-523)||(23690517-23690551)
chr2 (467-521)||(44254607-44254661)
chr2 (467-520)||(2563712-2563765)
chr2 (467-523)||(6170638-6170694)
chr2 (467-523)||(18176948-18177004)
chr2 (467-523)||(18723602-18723658)
chr2 (487-523)||(23358587-23358622)
chr2 (467-523)||(28245736-28245792)
chr2 (467-523)||(39449124-39449180)
chr2 (467-523)||(44711996-44712052)
[»] chr7 (24 HSPs)
chr7 (467-523)||(29162983-29163039)
chr7 (467-523)||(21559806-21559862)
chr7 (467-523)||(1471298-1471354)
chr7 (467-523)||(13729734-13729790)
chr7 (467-523)||(32777714-32777770)
chr7 (467-523)||(33180717-33180773)
chr7 (467-523)||(37899331-37899387)
chr7 (489-523)||(44495104-44495138)
chr7 (467-520)||(37899223-37899276)
chr7 (467-523)||(12007193-12007249)
chr7 (467-523)||(16980305-16980361)
chr7 (467-523)||(17002344-17002400)
chr7 (467-523)||(19786086-19786142)
chr7 (487-523)||(21204357-21204393)
chr7 (467-523)||(28036752-28036808)
chr7 (467-523)||(35192281-35192337)
chr7 (467-523)||(35586780-35586836)
chr7 (467-523)||(39231735-39231791)
chr7 (467-523)||(41893923-41893979)
chr7 (487-523)||(42584830-42584866)
chr7 (467-523)||(43573550-43573606)
chr7 (467-523)||(44184566-44184622)
chr7 (467-523)||(46829487-46829543)
chr7 (467-523)||(47448834-47448890)
[»] chr5 (26 HSPs)
chr5 (467-523)||(43441746-43441802)
chr5 (467-523)||(8920086-8920142)
chr5 (467-523)||(6517720-6517776)
chr5 (467-523)||(18695326-18695382)
chr5 (467-523)||(21922152-21922208)
chr5 (487-523)||(40364596-40364632)
chr5 (489-523)||(33037549-33037583)
chr5 (467-523)||(189710-189766)
chr5 (214-246)||(1422877-1422909)
chr5 (467-523)||(4088451-4088507)
chr5 (467-523)||(4430943-4430999)
chr5 (467-523)||(8267827-8267883)
chr5 (467-523)||(8675440-8675496)
chr5 (467-523)||(10649443-10649499)
chr5 (487-523)||(11880995-11881030)
chr5 (467-523)||(18842328-18842384)
chr5 (467-523)||(19271867-19271922)
chr5 (467-523)||(19481189-19481245)
chr5 (214-246)||(20271307-20271339)
chr5 (467-523)||(21064233-21064289)
chr5 (487-523)||(22098283-22098319)
chr5 (467-523)||(28903999-28904054)
chr5 (467-523)||(28940394-28940449)
chr5 (467-523)||(35099012-35099068)
chr5 (487-523)||(35172340-35172376)
chr5 (467-523)||(41173260-41173316)
[»] chr8 (19 HSPs)
chr8 (467-523)||(3946248-3946304)
chr8 (467-523)||(12707157-12707213)
chr8 (467-523)||(1633897-1633953)
chr8 (467-523)||(9549206-9549262)
chr8 (467-523)||(16872163-16872219)
chr8 (467-523)||(16966793-16966849)
chr8 (467-523)||(33100476-33100532)
chr8 (467-523)||(34718123-34718179)
chr8 (466-522)||(37783979-37784035)
chr8 (489-523)||(16327159-16327193)
chr8 (467-523)||(5277711-5277767)
chr8 (467-523)||(10644809-10644865)
chr8 (467-523)||(11017813-11017869)
chr8 (467-523)||(18651378-18651434)
chr8 (467-523)||(23793097-23793153)
chr8 (487-523)||(25830253-25830289)
chr8 (467-523)||(29991420-29991476)
chr8 (487-523)||(35067188-35067224)
chr8 (467-523)||(40528756-40528812)
[»] chr4 (30 HSPs)
chr4 (467-523)||(4915680-4915736)
chr4 (467-523)||(22819657-22819713)
chr4 (467-523)||(37514139-37514195)
chr4 (467-522)||(51887671-51887726)
chr4 (467-523)||(2268515-2268570)
chr4 (467-523)||(2401618-2401674)
chr4 (467-523)||(14527652-14527708)
chr4 (467-523)||(30079854-30079910)
chr4 (467-523)||(31076062-31076118)
chr4 (467-523)||(36111403-36111459)
chr4 (467-523)||(39344987-39345043)
chr4 (467-523)||(51194277-51194333)
chr4 (467-522)||(14010126-14010181)
chr4 (485-523)||(3078915-3078953)
chr4 (465-523)||(30170027-30170085)
chr4 (485-523)||(42815430-42815468)
chr4 (487-520)||(36123470-36123503)
chr4 (467-523)||(624319-624375)
chr4 (467-523)||(5932164-5932220)
chr4 (467-523)||(13139156-13139212)
chr4 (467-523)||(13263404-13263460)
chr4 (467-523)||(14451401-14451457)
chr4 (467-523)||(21617191-21617247)
chr4 (467-523)||(33860655-33860711)
chr4 (491-523)||(41082350-41082382)
chr4 (467-523)||(41486150-41486206)
chr4 (467-523)||(46566937-46566992)
chr4 (467-523)||(47519728-47519783)
chr4 (467-523)||(51255754-51255810)
chr4 (491-523)||(51986073-51986105)
[»] chr3 (34 HSPs)
chr3 (467-523)||(24482970-24483026)
chr3 (467-523)||(50206977-50207033)
chr3 (467-523)||(10206980-10207036)
chr3 (467-523)||(14207265-14207321)
chr3 (467-523)||(14215013-14215069)
chr3 (467-523)||(29573363-29573419)
chr3 (467-523)||(37927212-37927268)
chr3 (467-523)||(49363258-49363314)
chr3 (467-523)||(55400007-55400063)
chr3 (467-522)||(48353004-48353059)
chr3 (467-522)||(54773762-54773817)
chr3 (485-523)||(27718793-27718831)
chr3 (467-521)||(31931028-31931082)
chr3 (467-521)||(49983360-49983414)
chr3 (467-520)||(21196132-21196185)
chr3 (467-523)||(462409-462464)
chr3 (467-523)||(3347129-3347185)
chr3 (467-523)||(5244237-5244292)
chr3 (467-523)||(8846499-8846555)
chr3 (467-523)||(10811143-10811199)
chr3 (467-523)||(11633621-11633677)
chr3 (467-523)||(26996324-26996380)
chr3 (487-523)||(29917031-29917067)
chr3 (487-523)||(29966184-29966220)
chr3 (467-523)||(31376772-31376828)
chr3 (467-523)||(33375868-33375924)
chr3 (467-523)||(34057960-34058016)
chr3 (467-523)||(37508505-37508561)
chr3 (487-523)||(37894250-37894286)
chr3 (467-523)||(44677491-44677547)
chr3 (467-523)||(46019470-46019526)
chr3 (467-523)||(49417583-49417639)
chr3 (489-521)||(52254148-52254180)
chr3 (467-522)||(53718057-53718110)
[»] chr1 (31 HSPs)
chr1 (467-523)||(34040507-34040563)
chr1 (467-523)||(36577419-36577475)
chr1 (467-523)||(3603119-3603175)
chr1 (467-523)||(8411725-8411781)
chr1 (467-523)||(10890053-10890109)
chr1 (467-523)||(13489670-13489726)
chr1 (467-523)||(15705069-15705125)
chr1 (467-523)||(20565125-20565181)
chr1 (467-523)||(33054095-33054151)
chr1 (467-523)||(35136852-35136908)
chr1 (467-523)||(43893265-43893321)
chr1 (467-523)||(52362490-52362546)
chr1 (467-523)||(649776-649832)
chr1 (467-523)||(756864-756920)
chr1 (467-523)||(902646-902702)
chr1 (467-523)||(1852958-1853014)
chr1 (467-523)||(9566968-9567024)
chr1 (467-523)||(16658446-16658501)
chr1 (467-523)||(20288347-20288403)
chr1 (467-523)||(21433408-21433464)
chr1 (467-523)||(26837460-26837516)
chr1 (467-523)||(32915079-32915135)
chr1 (467-523)||(33024578-33024634)
chr1 (487-523)||(33076147-33076183)
chr1 (467-523)||(44789150-44789206)
chr1 (491-523)||(45640332-45640364)
chr1 (467-523)||(46082128-46082184)
chr1 (467-523)||(47214216-47214272)
chr1 (467-523)||(48983675-48983731)
chr1 (467-523)||(50433777-50433833)
chr1 (467-523)||(52714908-52714964)
[»] chr6 (17 HSPs)
chr6 (467-520)||(15368833-15368886)
chr6 (467-523)||(2777323-2777379)
chr6 (467-523)||(6531190-6531246)
chr6 (467-523)||(20822875-20822931)
chr6 (467-522)||(5327600-5327655)
chr6 (467-523)||(754445-754501)
chr6 (467-523)||(2075458-2075514)
chr6 (467-523)||(4820259-4820315)
chr6 (467-523)||(13143389-13143445)
chr6 (467-523)||(15318195-15318251)
chr6 (467-523)||(22341181-22341237)
chr6 (467-523)||(30152537-30152593)
chr6 (467-523)||(32046706-32046762)
chr6 (467-523)||(32459524-32459580)
chr6 (467-523)||(33421768-33421824)
chr6 (467-523)||(34570602-34570658)
chr6 (467-523)||(35213568-35213624)
[»] scaffold0532 (1 HSPs)
scaffold0532 (467-523)||(10972-11028)
[»] scaffold0321 (1 HSPs)
scaffold0321 (467-523)||(19644-19700)
[»] scaffold0201 (1 HSPs)
scaffold0201 (467-523)||(8480-8536)
[»] scaffold0098 (1 HSPs)
scaffold0098 (491-523)||(49326-49358)


Alignment Details
Target: chr2 (Bit Score: 200; Significance: 1e-109; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 19 - 247
Target Start/End: Complemental strand, 34120165 - 34119937
Alignment:
Q  19 aaacaccgttattagagtggaatatacgttacggtggataatgagtgcattagtgatttgttatatagttcagtcgtttatgataagttcgattccattt 118  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34120165 aaacaccgttattagagtggtatatacgttacggtggataatgagtgcattagtgatttgttatatagttcagtcgtttatgataagttcgattccattt 34120066  T
Q  119 ttgttaaaaaatttacttcaaatacatttttataatagtttttaatgaacctctaccaataaaatacaataactctaaccgtcnnnnnnnactcatgaaa 218  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||    
T  34120065 ttgttaaaaaaattacttcaaatacatttttataatagtttttaatgaacctctaccaataaaatacaataactctaaccgtctttttttactcatgaaa 34119966  T
Q  219 tcgcatttaaatatttgttttgaatttta 247  Q
    |||||||||||||||||||||||||||||    
T  34119965 tcgcatttaaatatttgttttgaatttta 34119937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 335 - 523
Target Start/End: Complemental strand, 34119847 - 34119659
Alignment:
Q  335 gcaaatagaactattaagaaagaattatgttttaattgttttcttaaacatgacaaaatcataagacaacttcttc-nnnnnnngtcaatttaagacttt 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        | |||||| |||||||    
T  34119847 gcaaatagaactattaagaaagaattatgttttaattgttttcttaaacatgacaaaatcataagacaacttcttcttttttttgacaattt-agacttt 34119749  T
Q  434 gtctaatcctatatatnnnnnnnnnnnnnnnttatatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||               ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  34119748 gtctaatcctatatataaaaaaaataaaaaattatatttgaacatccatattgtaacaacttttacgacaactttctctctcatactcac 34119659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 9194437 - 9194493
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  ||| |||||||||| ||||||||||||||||||||||||    
T  9194437 atatttgaacatccattttgtgacaacttttatgacaactttctctctcatactcac 9194493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 30977897 - 30977953
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  ||| |||||||||| ||||||||||||||||||||||||    
T  30977897 atatttgaacatccattttgtgacaacttttatgacaactttctctctcatactcac 30977953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 5031931 - 5031987
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||| ||| ||||  ||||||||||||| |||||||||||||||||||||||||    
T  5031931 atatttgtacaaccattttgtaacaacttttgcgacaactttctctctcatactcac 5031987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 36802904 - 36802960
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  ||| ||||||||| | |||||||||||||||||||||||    
T  36802904 atatttgaacatccattttgtgacaacttttgctacaactttctctctcatactcac 36802960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 6999131 - 6999075
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  | | |||||||||  ||||||||||||||||||||||||    
T  6999131 atatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcac 6999075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 12889895 - 12889839
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    |||| |||||||||||  ||| ||||||||| | |||||||||||||||||||||||    
T  12889895 atatatgaacatccattttgtgacaacttttgctacaactttctctctcatactcac 12889839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 13347878 - 13347822
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  ||| |||| |||| | |||||||||||||||||||||||    
T  13347878 atatttgaacatccattttgtgacaatttttgcaacaactttctctctcatactcac 13347822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 519
Target Start/End: Original strand, 28679324 - 28679376
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatac 519  Q
    ||||||||||||||||   || ||||||||| |||||||||||||||||||||    
T  28679324 atatttgaacatccatttggtgacaacttttgcgacaactttctctctcatac 28679376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 487 - 523
Target Start/End: Original strand, 29449239 - 29449275
Alignment:
Q  487 taacaacttttacgacaactttctctctcatactcac 523  Q
    |||||||||||| ||||||||||||||||||||||||    
T  29449239 taacaacttttatgacaactttctctctcatactcac 29449275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 35589450 - 35589394
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  ||| ||||||||| | |||| ||||||||||||||||||    
T  35589450 atatttgaacatccattttgtgacaacttttgcaacaattttctctctcatactcac 35589394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 467 - 522
Target Start/End: Original strand, 13765408 - 13765463
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactca 522  Q
    ||||||||||||||||  | | |||||||||  |||||||||||||||||||||||    
T  13765408 atatttgaacatccattttatgacaacttttgtgacaactttctctctcatactca 13765463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 467 - 522
Target Start/End: Complemental strand, 14233782 - 14233727
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactca 522  Q
    ||||||||||||||||  ||| |||||||||  ||||| |||||||||||||||||    
T  14233782 atatttgaacatccattttgtgacaacttttgtgacaaatttctctctcatactca 14233727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 467 - 522
Target Start/End: Original strand, 39449275 - 39449330
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactca 522  Q
    ||||||||| ||||||  ||| ||||||||| | ||||||||||||||||||||||    
T  39449275 atatttgaatatccattttgtgacaacttttgcaacaactttctctctcatactca 39449330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 467 - 521
Target Start/End: Complemental strand, 4299589 - 4299535
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactc 521  Q
    |||||||||||| |||  ||| ||||||||| | |||||||||||||||||||||    
T  4299589 atatttgaacattcattttgtgacaactttttctacaactttctctctcatactc 4299535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 523
Target Start/End: Complemental strand, 23690551 - 23690517
Alignment:
Q  489 acaacttttacgacaactttctctctcatactcac 523  Q
    |||||||||| ||||||||||||||||||||||||    
T  23690551 acaacttttatgacaactttctctctcatactcac 23690517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 467 - 521
Target Start/End: Original strand, 44254607 - 44254661
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactc 521  Q
    |||||||||||| ||| |||| |||||||||   |||||||||||||||||||||    
T  44254607 atatttgaacattcattctgtgacaacttttgttacaactttctctctcatactc 44254661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 467 - 520
Target Start/End: Original strand, 2563712 - 2563765
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatact 520  Q
    ||||||||||||||||  | | |||||||||  |||||||||||||||||||||    
T  2563712 atatttgaacatccattttatgacaacttttgtgacaactttctctctcatact 2563765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 6170638 - 6170694
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    |||||| |||||||||  | | |||||||||  ||||||||||||||||||||||||    
T  6170638 atatttcaacatccattttatgacaacttttgtgacaactttctctctcatactcac 6170694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 18176948 - 18177004
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||| ||   || ||||||||| | |||||||||||||||||||||||    
T  18176948 atatttgaacatctatttagtgacaacttttgcaacaactttctctctcatactcac 18177004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 18723602 - 18723658
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  ||| |||| ||||   |||||||||||||||||||||||    
T  18723602 atatttgaacatccattttgtgacaatttttgttacaactttctctctcatactcac 18723658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 487 - 523
Target Start/End: Complemental strand, 23358622 - 23358587
Alignment:
Q  487 taacaacttttacgacaactttctctctcatactcac 523  Q
    |||||||||||| ||||||||||||||||||||||||    
T  23358622 taacaactttta-gacaactttctctctcatactcac 23358587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 28245736 - 28245792
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||| ||  ||  |||||||||  ||||||||||||||||||||||||    
T  28245736 atatttgaacatctattttgcgacaacttttgtgacaactttctctctcatactcac 28245792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 39449180 - 39449124
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  ||| |||||||||   |||||||||||| ||||||||||    
T  39449180 atatttgaacatccattttgtgacaacttttgttacaactttctctttcatactcac 39449124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 44712052 - 44711996
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  ||| |||| |||| | |||||||||||| ||||||||||    
T  44712052 atatttgaacatccattttgtgacaatttttgctacaactttctctttcatactcac 44711996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 29163039 - 29162983
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||   |||||||||||||| |||||||||||||||||||||||    
T  29163039 atatttgaacatccatttagtaacaacttttacaacaactttctctctcatactcac 29162983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 21559806 - 21559862
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    |||||||||||||||| |||| ||||||||| | |||||||| ||||||||||||||    
T  21559806 atatttgaacatccattctgtgacaacttttgctacaactttatctctcatactcac 21559862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 1471354 - 1471298
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||| ||| ||||  |||||||||||||  ||||||||||||||||||||||||    
T  1471354 atatttgtacaaccattttgtaacaacttttgtgacaactttctctctcatactcac 1471298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 13729734 - 13729790
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  ||| ||||||||| | |||||||||| ||||||||||||    
T  13729734 atatttgaacatccattttgtgacaacttttgcaacaactttctttctcatactcac 13729790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 32777770 - 32777714
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||| ||||  | | |||||||||| ||||||||||||||||||||||||    
T  32777770 atatttgaacaaccattttttgacaacttttatgacaactttctctctcatactcac 32777714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 33180773 - 33180717
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    |||||||||||| |||  ||| |||||||||| ||||| ||||||||||||||||||    
T  33180773 atatttgaacattcattttgtgacaacttttatgacaattttctctctcatactcac 33180717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 37899331 - 37899387
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  ||| |||||||||  ||||||||| ||||||||||||||    
T  37899331 atatttgaacatccattttgtgacaacttttgtgacaactttatctctcatactcac 37899387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 523
Target Start/End: Complemental strand, 44495138 - 44495104
Alignment:
Q  489 acaacttttacgacaactttctctctcatactcac 523  Q
    |||||||||| ||||||||||||||||||||||||    
T  44495138 acaacttttatgacaactttctctctcatactcac 44495104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 467 - 520
Target Start/End: Complemental strand, 37899276 - 37899223
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatact 520  Q
    ||||||||||||||||  ||| |||| ||||  |||||||||||||||||||||    
T  37899276 atatttgaacatccattttgtgacaatttttgtgacaactttctctctcatact 37899223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 12007249 - 12007193
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||| ||||  | | |||||||||  ||||||||||||||||||||||||    
T  12007249 atatttgaacaaccattttttgacaacttttgtgacaactttctctctcatactcac 12007193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 16980305 - 16980361
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    |||||||||||| |||  ||| ||||||||| | |||||||||||||| ||||||||    
T  16980305 atatttgaacattcattttgtgacaacttttgcaacaactttctctcttatactcac 16980361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 17002344 - 17002400
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||| ||||  | |||||||||||| || |||||||||| ||||||||||    
T  17002344 atatttgaacaaccattttttaacaacttttatgataactttctctttcatactcac 17002400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 19786142 - 19786086
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||   || ||||||||| | ||||||||||||| |||||||||    
T  19786142 atatttgaacatccatttagtgacaacttttgcaacaactttctctcacatactcac 19786086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 487 - 523
Target Start/End: Original strand, 21204357 - 21204393
Alignment:
Q  487 taacaacttttacgacaactttctctctcatactcac 523  Q
    |||||||||||  ||||||||||||||||||||||||    
T  21204357 taacaacttttgtgacaactttctctctcatactcac 21204393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 28036752 - 28036808
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    |||||||||||| |||  ||| ||||||||| | |||||||||||||| ||||||||    
T  28036752 atatttgaacattcatgttgtgacaacttttgcaacaactttctctcttatactcac 28036808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 35192337 - 35192281
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  ||| |||||||||| || || ||| ||||||||||||||    
T  35192337 atatttgaacatccattttgtgacaacttttatgataattttttctctcatactcac 35192281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 35586836 - 35586780
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  | | | |||||||  ||||||||||||||||||||||||    
T  35586836 atatttgaacatccattttatgataacttttgtgacaactttctctctcatactcac 35586780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 39231791 - 39231735
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    |||||||||||||||    || ||||||||| | |||||||||||||||||||||||    
T  39231791 atatttgaacatccagttagtgacaacttttgcaacaactttctctctcatactcac 39231735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 41893923 - 41893979
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  | | |||||||||  ||||||||||||| ||||||||||    
T  41893923 atatttgaacatccattttatgacaacttttgtgacaactttctctttcatactcac 41893979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 487 - 523
Target Start/End: Original strand, 42584830 - 42584866
Alignment:
Q  487 taacaacttttacgacaactttctctctcatactcac 523  Q
    |||||||||||  ||||||||||||||||||||||||    
T  42584830 taacaacttttgtgacaactttctctctcatactcac 42584866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 43573606 - 43573550
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||| ||  ||| ||||||||| | |||||||||||||||||| ||||    
T  43573606 atatttgaacatctattttgtgacaacttttgcaacaactttctctctcatattcac 43573550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 44184622 - 44184566
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||| ||  ||  |||||||||  ||||||||||||||||||||||||    
T  44184622 atatttgaacatctattttgcgacaacttttgtgacaactttctctctcatactcac 44184566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 46829487 - 46829543
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||| ||| ||||  |||||||| ||||  ||||||||||||||||||||||||    
T  46829487 atatttgtacaaccattttgtaacaatttttgtgacaactttctctctcatactcac 46829543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 47448834 - 47448890
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||| ||||  | | |||||||||  ||||||||||||||||||||||||    
T  47448834 atatttgaacaaccattttttgacaacttttgtgacaactttctctctcatactcac 47448890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 43441746 - 43441802
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  ||||||||||||| | |||||||||||||||||||||||    
T  43441746 atatttgaacatccattttgtaacaacttttgcaacaactttctctctcatactcac 43441802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 8920086 - 8920142
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  ||| |||||||||  ||||||||||||||||||||||||    
T  8920086 atatttgaacatccattttgtgacaacttttgtgacaactttctctctcatactcac 8920142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 6517720 - 6517776
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  | | |||||||||  ||||||||||||||||||||||||    
T  6517720 atatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcac 6517776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 18695326 - 18695382
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||| ||| ||||  |||||||||||||  ||||||||||||||||||||||||    
T  18695326 atatttgtacaaccattttgtaacaacttttgtgacaactttctctctcatactcac 18695382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 21922208 - 21922152
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  ||| ||||| |||  ||||||||||||||||||||||||    
T  21922208 atatttgaacatccattttgtgacaacgtttgtgacaactttctctctcatactcac 21922152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 487 - 523
Target Start/End: Original strand, 40364596 - 40364632
Alignment:
Q  487 taacaacttttacgacaactttctctctcatactcac 523  Q
    |||||||||||| ||||||||||||||||||||||||    
T  40364596 taacaacttttatgacaactttctctctcatactcac 40364632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 523
Target Start/End: Original strand, 33037549 - 33037583
Alignment:
Q  489 acaacttttacgacaactttctctctcatactcac 523  Q
    |||||||||| ||||||||||||||||||||||||    
T  33037549 acaacttttatgacaactttctctctcatactcac 33037583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 189766 - 189710
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  | | | |||||||  ||||||||||||||||||||||||    
T  189766 atatttgaacatccattttatgataacttttgtgacaactttctctctcatactcac 189710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 214 - 246
Target Start/End: Original strand, 1422877 - 1422909
Alignment:
Q  214 tgaaatcgcatttaaatatttgttttgaatttt 246  Q
    ||||||| |||||||||||||||||||||||||    
T  1422877 tgaaatcacatttaaatatttgttttgaatttt 1422909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 4088451 - 4088507
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||| ||||||||  | |||||||||||  ||||||||||||| ||||||||||    
T  4088451 atatttgtacatccattttataacaacttttgtgacaactttctctttcatactcac 4088507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 4430999 - 4430943
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||   || ||||||||| | |||||||| ||||||||||||||    
T  4430999 atatttgaacatccatttagtgacaacttttgcaacaactttttctctcatactcac 4430943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 8267883 - 8267827
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||   || |||| |||| | |||||||||||||||||||||||    
T  8267883 atatttgaacatccatttagtgacaatttttgcaacaactttctctctcatactcac 8267827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 8675496 - 8675440
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  ||| | ||||||| | |||| ||||||||||||||||||    
T  8675496 atatttgaacatccattttgtgataacttttgcaacaattttctctctcatactcac 8675440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 10649443 - 10649499
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  | | |||||||||  ||||||||||||| ||||||||||    
T  10649443 atatttgaacatccattttatgacaacttttgtgacaactttctctttcatactcac 10649499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 487 - 523
Target Start/End: Complemental strand, 11881030 - 11880995
Alignment:
Q  487 taacaacttttacgacaactttctctctcatactcac 523  Q
    |||||||||||| ||||||||||||||||||||||||    
T  11881030 taacaactttta-gacaactttctctctcatactcac 11880995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 18842384 - 18842328
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||   || | ||||||| | |||||||||||||||||||||||    
T  18842384 atatttgaacatccatttagtgataacttttgcaacaactttctctctcatactcac 18842328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 19271867 - 19271922
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||| ||| ||||  ||||||||| |||| ||||||||||||||||||||||||    
T  19271867 atatttgtacaaccattttgtaacaacgttta-gacaactttctctctcatactcac 19271922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 19481245 - 19481189
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  | | | |||||||  ||||||||||||||||||||||||    
T  19481245 atatttgaacatccattttatgataacttttgtgacaactttctctctcatactcac 19481189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 214 - 246
Target Start/End: Original strand, 20271307 - 20271339
Alignment:
Q  214 tgaaatcgcatttaaatatttgttttgaatttt 246  Q
    ||||||| |||||||||||||||||||||||||    
T  20271307 tgaaatcacatttaaatatttgttttgaatttt 20271339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 21064289 - 21064233
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    |||||||||||| |||   || ||||||||| | |||||||||||||||||||||||    
T  21064289 atatttgaacattcatttagtgacaacttttgcaacaactttctctctcatactcac 21064233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 487 - 523
Target Start/End: Original strand, 22098283 - 22098319
Alignment:
Q  487 taacaacttttacgacaactttctctctcatactcac 523  Q
    |||||||||||  ||||||||||||||||||||||||    
T  22098283 taacaacttttgtgacaactttctctctcatactcac 22098319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 28903999 - 28904054
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||| ||| ||| | ||| |||||||||| ||||||||||||||||||||||||    
T  28903999 atatttgtacaaccacattgtgacaactttta-gacaactttctctctcatactcac 28904054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 28940394 - 28940449
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||| ||| ||| | ||| |||||||||| ||||||||||||||||||||||||    
T  28940394 atatttgtacaaccacattgtgacaactttta-gacaactttctctctcatactcac 28940449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 35099068 - 35099012
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||| ||   || ||||||||| | |||||||||||||||||||||||    
T  35099068 atatttgaacatctatttagtgacaacttttgcaacaactttctctctcatactcac 35099012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 487 - 523
Target Start/End: Complemental strand, 35172376 - 35172340
Alignment:
Q  487 taacaacttttacgacaactttctctctcatactcac 523  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  35172376 taacaacttttatgacaactttctttctcatactcac 35172340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 41173260 - 41173316
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    |||||| |||||||||  ||| |||||||||   |||||||||||||||||||||||    
T  41173260 atatttaaacatccattttgtgacaacttttgtaacaactttctctctcatactcac 41173316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.00000000001; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 3946248 - 3946304
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  ||| |||||||||  ||||||||||||||||||||||||    
T  3946248 atatttgaacatccattttgtgacaacttttgtgacaactttctctctcatactcac 3946304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 12707157 - 12707213
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  | | ||||||||| |||||||||||||||||||||||||    
T  12707157 atatttgaacatccattttatgacaacttttgcgacaactttctctctcatactcac 12707213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 1633953 - 1633897
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||   || ||||||||| | |||||||||||||||||||||||    
T  1633953 atatttgaacatccatttagtgacaacttttgcaacaactttctctctcatactcac 1633897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 9549262 - 9549206
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  ||| |||||||||  ||||| ||||||||||||||||||    
T  9549262 atatttgaacatccattttgtgacaacttttgtgacaattttctctctcatactcac 9549206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 16872219 - 16872163
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  ||| ||||||||| | |||||||||||| ||||||||||    
T  16872219 atatttgaacatccattttgtgacaacttttgcaacaactttctctatcatactcac 16872163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 16966793 - 16966849
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||   || ||||||||| | |||||||||||||||||||||||    
T  16966793 atatttgaacatccatttagtgacaacttttgcaacaactttctctctcatactcac 16966849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 33100532 - 33100476
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||| ||||  | |||||||||||  ||||||||||||||||||||||||    
T  33100532 atatttgaacaaccattttataacaacttttgtgacaactttctctctcatactcac 33100476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 34718123 - 34718179
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  ||| |||||||||   |||||||||||||||||||||||    
T  34718123 atatttgaacatccattttgtgacaacttttgttacaactttctctctcatactcac 34718179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 466 - 522
Target Start/End: Complemental strand, 37784035 - 37783979
Alignment:
Q  466 tatatttgaacatccatactgtaacaacttttacgacaactttctctctcatactca 522  Q
    |||||||||||||||||   || ||||||||| | ||||||||||||||||||||||    
T  37784035 tatatttgaacatccatttagtgacaacttttgcaacaactttctctctcatactca 37783979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 523
Target Start/End: Complemental strand, 16327193 - 16327159
Alignment:
Q  489 acaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||| |||||||||||||||||||||||||    
T  16327193 acaacttttgcgacaactttctctctcatactcac 16327159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 5277767 - 5277711
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  ||| ||||| ||| | |||| ||||||||||||||||||    
T  5277767 atatttgaacatccattttgtgacaacctttgctacaattttctctctcatactcac 5277711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 10644865 - 10644809
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||| ||| ||||  |||||||||||||  ||||||||||||||||||| ||||    
T  10644865 atatttgtacaaccattttgtaacaacttttgtgacaactttctctctcataatcac 10644809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 11017813 - 11017869
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||    | ||||||||| | |||||||||||||||||||||||    
T  11017813 atatttgaacatccatttaatgacaacttttgcaacaactttctctctcatactcac 11017869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 18651378 - 18651434
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||| ||   ||||||||||||  ||||| ||||||||||||||||||    
T  18651378 atatttgaacatctatttggtaacaacttttgtgacaattttctctctcatactcac 18651434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 23793153 - 23793097
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  ||| ||||||| |  |||||| |||||||||||||||||    
T  23793153 atatttgaacatccattttgtgacaacttatgtgacaacattctctctcatactcac 23793097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 487 - 523
Target Start/End: Complemental strand, 25830289 - 25830253
Alignment:
Q  487 taacaacttttacgacaactttctctctcatactcac 523  Q
    |||||||||||  ||||||||||||||||||||||||    
T  25830289 taacaacttttgtgacaactttctctctcatactcac 25830253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 29991420 - 29991476
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  ||| |||||||||   |||||||||||| ||||||||||    
T  29991420 atatttgaacatccattttgtgacaacttttgttacaactttctctttcatactcac 29991476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 487 - 523
Target Start/End: Original strand, 35067188 - 35067224
Alignment:
Q  487 taacaacttttacgacaactttctctctcatactcac 523  Q
    |||||||||||  ||||||||||||||||||||||||    
T  35067188 taacaacttttgtgacaactttctctctcatactcac 35067224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 40528756 - 40528812
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||| | ||  ||| |||||||||| ||||||||||||| ||||||||||    
T  40528756 atatttgaacaactattttgtgacaacttttatgacaactttctctttcatactcac 40528812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000001; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 4915736 - 4915680
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  ||| |||| ||||| ||||||||||||||||||||||||    
T  4915736 atatttgaacatccattttgtgacaatttttatgacaactttctctctcatactcac 4915680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 22819657 - 22819713
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  ||| ||||||||| | |||||||||||||||||||||||    
T  22819657 atatttgaacatccattttgtgacaacttttgcaacaactttctctctcatactcac 22819713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 37514195 - 37514139
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||| ||||||||  |||||||||||||  ||||||||||||||||||||||||    
T  37514195 atatttgtacatccattttgtaacaacttttgtgacaactttctctctcatactcac 37514139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 467 - 522
Target Start/End: Original strand, 51887671 - 51887726
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactca 522  Q
    ||||||||||||||||  ||| ||||||||| | ||||||||||||||||||||||    
T  51887671 atatttgaacatccattttgtgacaacttttgctacaactttctctctcatactca 51887726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 2268570 - 2268515
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  | |||||||||||  ||||||||||||||||||||||||    
T  2268570 atatttgaacatccatttt-taacaacttttgtgacaactttctctctcatactcac 2268515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 2401618 - 2401674
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  ||| |||||||||  ||||||||| ||||||||||||||    
T  2401618 atatttgaacatccattttgtgacaacttttgtgacaactttatctctcatactcac 2401674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 14527652 - 14527708
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  ||| ||||||||| | ||||||||| |||||||||||||    
T  14527652 atatttgaacatccattttgtgacaacttttgctacaactttcactctcatactcac 14527708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 30079854 - 30079910
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||   || ||||||||| | |||||||||||||||||||||||    
T  30079854 atatttgaacatccatttagtgacaacttttgcaacaactttctctctcatactcac 30079910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 31076062 - 31076118
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||   |||||||||| |  ||||||||||||||||||||||||    
T  31076062 atatttgaacatccatttggtaacaacttctgggacaactttctctctcatactcac 31076118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 36111459 - 36111403
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||   |||||||||||| | |||||||| ||||||||||||||    
T  36111459 atatttgaacatccatttagtaacaacttttgcaacaactttatctctcatactcac 36111403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 39345043 - 39344987
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  ||| |||| |||| | |||||||||||||||||||||||    
T  39345043 atatttgaacatccattttgtgacaatttttgcaacaactttctctctcatactcac 39344987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 51194277 - 51194333
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||   || ||||||||||| |||||||||||| ||||||||||    
T  51194277 atatttgaacatccatttagtgacaacttttacaacaactttctctttcatactcac 51194333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 467 - 522
Target Start/End: Complemental strand, 14010181 - 14010126
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactca 522  Q
    ||||||||||||||||  ||| ||||||||||| | |||||| |||||||||||||    
T  14010181 atatttgaacatccattttgtgacaacttttacaataactttttctctcatactca 14010126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 485 - 523
Target Start/End: Complemental strand, 3078953 - 3078915
Alignment:
Q  485 tgtaacaacttttacgacaactttctctctcatactcac 523  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  3078953 tgtaacaacttttgtgacaactttctctctcatactcac 3078915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 523
Target Start/End: Complemental strand, 30170085 - 30170027
Alignment:
Q  465 ttatatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||| ||  | | |||||||||  ||||||||||||||||||||||||    
T  30170085 ttatatttgaacatctattttatgacaacttttgtgacaactttctctctcatactcac 30170027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 485 - 523
Target Start/End: Original strand, 42815430 - 42815468
Alignment:
Q  485 tgtaacaacttttacgacaactttctctctcatactcac 523  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  42815430 tgtaacaacttttgtgacaactttctctctcatactcac 42815468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 520
Target Start/End: Complemental strand, 36123503 - 36123470
Alignment:
Q  487 taacaacttttacgacaactttctctctcatact 520  Q
    |||||||||||| |||||||||||||||||||||    
T  36123503 taacaacttttatgacaactttctctctcatact 36123470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 624375 - 624319
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||| ||   || ||||||||| | |||||||||||||||||||||||    
T  624375 atatttgaacatctatttagtgacaacttttgcaacaactttctctctcatactcac 624319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 5932220 - 5932164
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    |||||| |||||||||   || ||||||||| | |||||||||||||||||||||||    
T  5932220 atatttaaacatccatttagtgacaacttttgcaacaactttctctctcatactcac 5932164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 13139156 - 13139212
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  | | | || ||||| ||||||||||||||||||||||||    
T  13139156 atatttgaacatccattttatgataatttttatgacaactttctctctcatactcac 13139212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 13263460 - 13263404
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||| ||  ||| ||||||||| | |||||||||||||| ||||||||    
T  13263460 atatttgaacatctattttgtgacaacttttgctacaactttctctcttatactcac 13263404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 14451401 - 14451457
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||   || ||||||||  | |||||||||||||||||||||||    
T  14451401 atatttgaacatccatttagtgacaactttagcaacaactttctctctcatactcac 14451457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 21617191 - 21617247
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  ||| |||| ||||   |||||||||||||||||||||||    
T  21617191 atatttgaacatccattttgtgacaatttttgttacaactttctctctcatactcac 21617247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 33860655 - 33860711
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||   || |||| ||||  ||||||||||||||||||||||||    
T  33860655 atatttgaacatccatttggtgacaatttttgtgacaactttctctctcatactcac 33860711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 491 - 523
Target Start/End: Original strand, 41082350 - 41082382
Alignment:
Q  491 aacttttacgacaactttctctctcatactcac 523  Q
    |||||||| ||||||||||||||||||||||||    
T  41082350 aacttttatgacaactttctctctcatactcac 41082382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 41486206 - 41486150
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||   || | ||||||| | |||||||||||||||||||||||    
T  41486206 atatttgaacatccatttagtgataacttttgcaacaactttctctctcatactcac 41486150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 46566937 - 46566992
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||| |||||||   ||| |||||||||| ||||||||||||||||||||||||    
T  46566937 atatttgtacatccactttgtgacaactttta-gacaactttctctctcatactcac 46566992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 47519783 - 47519728
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||| ||||||||  |||||||||||||   |||||||||||||||||||||||    
T  47519783 atatttgtacatccattttgtaacaacttttga-acaactttctctctcatactcac 47519728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 51255754 - 51255810
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||| ||||  | | |||||||||  ||||||||||||||||||||||||    
T  51255754 atatttgaacaaccattttttgacaacttttgtgacaactttctctctcatactcac 51255810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 491 - 523
Target Start/End: Original strand, 51986073 - 51986105
Alignment:
Q  491 aacttttacgacaactttctctctcatactcac 523  Q
    |||||||| ||||||||||||||||||||||||    
T  51986073 aacttttatgacaactttctctctcatactcac 51986105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.00000000001; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 24483026 - 24482970
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  ||| ||||||||| | |||||||||||||||||||||||    
T  24483026 atatttgaacatccattttgtgacaacttttgcaacaactttctctctcatactcac 24482970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 50207033 - 50206977
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  ||| ||||||||| | |||||||||||||||||||||||    
T  50207033 atatttgaacatccattttgtgacaacttttgcaacaactttctctctcatactcac 50206977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 10207036 - 10206980
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||   || ||||||||| | |||||||||||||||||||||||    
T  10207036 atatttgaacatccatttagtgacaacttttgcaacaactttctctctcatactcac 10206980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 14207321 - 14207265
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||| | ||  |||||||||||||  ||||||||||||||||||||||||    
T  14207321 atatttgaacaacgattttgtaacaacttttgtgacaactttctctctcatactcac 14207265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 14215069 - 14215013
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||| | ||  |||||||||||||  ||||||||||||||||||||||||    
T  14215069 atatttgaacaacgattttgtaacaacttttgtgacaactttctctctcatactcac 14215013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 29573419 - 29573363
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||| ||| ||||  |||||||||||||  ||||||||||||||||||||||||    
T  29573419 atatttgtacaaccattttgtaacaacttttgtgacaactttctctctcatactcac 29573363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 37927268 - 37927212
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||   || |||||||||  ||||||||||||||||||||||||    
T  37927268 atatttgaacatccatttggtgacaacttttgtgacaactttctctctcatactcac 37927212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 49363314 - 49363258
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||   || ||||||||| | |||||||||||||||||||||||    
T  49363314 atatttgaacatccatttagtgacaacttttgcaacaactttctctctcatactcac 49363258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 55400007 - 55400063
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  | | |||||||||  ||||||||||||||||||||||||    
T  55400007 atatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcac 55400063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 467 - 522
Target Start/End: Original strand, 48353004 - 48353059
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactca 522  Q
    ||||||| ||||||||  | |||||||||||  |||||||||||||||||||||||    
T  48353004 atatttgtacatccattttttaacaacttttgtgacaactttctctctcatactca 48353059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 467 - 522
Target Start/End: Complemental strand, 54773817 - 54773762
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactca 522  Q
    ||||||||||||||||   || ||||||||||  ||||||||||||||||||||||    
T  54773817 atatttgaacatccatttagtgacaacttttataacaactttctctctcatactca 54773762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 485 - 523
Target Start/End: Complemental strand, 27718831 - 27718793
Alignment:
Q  485 tgtaacaacttttacgacaactttctctctcatactcac 523  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  27718831 tgtaacaacttttgtgacaactttctctctcatactcac 27718793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 467 - 521
Target Start/End: Complemental strand, 31931082 - 31931028
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactc 521  Q
    ||||||||||||||||  | |||||||||||  ||||| ||||||||||||||||    
T  31931082 atatttgaacatccattttttaacaacttttgtgacaattttctctctcatactc 31931028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 467 - 521
Target Start/End: Complemental strand, 49983414 - 49983360
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactc 521  Q
    ||||||||||||||||   || |||||||||  ||||||||||||||||||||||    
T  49983414 atatttgaacatccatttggttacaacttttgggacaactttctctctcatactc 49983360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 467 - 520
Target Start/End: Original strand, 21196132 - 21196185
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatact 520  Q
    ||||||||||||||||  ||| ||||||| |  |||||||||||||||||||||    
T  21196132 atatttgaacatccattttgtgacaacttctgtgacaactttctctctcatact 21196185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 462464 - 462409
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||| ||| ||||  ||| |||||||||| ||||||||||||||||||||||||    
T  462464 atatttgtacaaccattttgtgacaactttta-gacaactttctctctcatactcac 462409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 3347185 - 3347129
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  ||| | ||||||| | |||||||||||||||||| ||||    
T  3347185 atatttgaacatccattttgtgataacttttgctacaactttctctctcatattcac 3347129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 5244237 - 5244292
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||| ||||| | || ||||||||  ||||||||||||||||||||||||    
T  5244237 atatttgaacaaccatatttta-caacttttgtgacaactttctctctcatactcac 5244292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 8846499 - 8846555
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||| || |  |||||||||||  ||||| ||||||||||||||||||    
T  8846499 atatttgaacatctattcgataacaacttttgtgacaattttctctctcatactcac 8846555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 10811143 - 10811199
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||| ||||  | | |||||||||  ||||||||||||||||||||||||    
T  10811143 atatttgaacaaccattttatgacaacttttgtgacaactttctctctcatactcac 10811199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 11633621 - 11633677
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||   | |||||||||| | |||||||||||||||||| ||||    
T  11633621 atatttgaacatccatttagcaacaacttttgcaacaactttctctctcatattcac 11633677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 26996324 - 26996380
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    |||||||||||| |||   ||||||||||||   |||||||||||||||||||||||    
T  26996324 atatttgaacattcatttagtaacaacttttgtaacaactttctctctcatactcac 26996380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 487 - 523
Target Start/End: Complemental strand, 29917067 - 29917031
Alignment:
Q  487 taacaacttttacgacaactttctctctcatactcac 523  Q
    |||||||||||  ||||||||||||||||||||||||    
T  29917067 taacaacttttgtgacaactttctctctcatactcac 29917031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 487 - 523
Target Start/End: Complemental strand, 29966220 - 29966184
Alignment:
Q  487 taacaacttttacgacaactttctctctcatactcac 523  Q
    |||||||||||  ||||||||||||||||||||||||    
T  29966220 taacaacttttgtgacaactttctctctcatactcac 29966184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 31376828 - 31376772
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  ||| |||||||||   |||||||||||| ||||||||||    
T  31376828 atatttgaacatccattttgtgacaacttttgttacaactttctctttcatactcac 31376772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 33375868 - 33375924
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    |||||| |||||||||   || ||||||||||| |||| ||||||||||||||||||    
T  33375868 atatttcaacatccatttagtgacaacttttacaacaattttctctctcatactcac 33375924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 34058016 - 34057960
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  | | | |||||||  ||||||||||||||||||||||||    
T  34058016 atatttgaacatccattttatgataacttttgtgacaactttctctctcatactcac 34057960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 37508561 - 37508505
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||   || | ||||||| | |||||||||||||||||||||||    
T  37508561 atatttgaacatccatttagtgataacttttgcaacaactttctctctcatactcac 37508505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 487 - 523
Target Start/End: Complemental strand, 37894286 - 37894250
Alignment:
Q  487 taacaacttttacgacaactttctctctcatactcac 523  Q
    |||||||||||  ||||||||||||||||||||||||    
T  37894286 taacaacttttgtgacaactttctctctcatactcac 37894250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 44677547 - 44677491
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||   || ||||||||| | |||| ||||||||||||||||||    
T  44677547 atatttgaacatccatttagtgacaacttttgcaacaattttctctctcatactcac 44677491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 46019470 - 46019526
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||| ||  ||  |||||||||  ||||||||||||||||||||||||    
T  46019470 atatttgaacatctattttgcgacaacttttgtgacaactttctctctcatactcac 46019526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 49417583 - 49417639
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||| ||  | | |||||||||  ||||||||||||||||||||||||    
T  49417583 atatttgaacatctattttatgacaacttttgtgacaactttctctctcatactcac 49417639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 489 - 521
Target Start/End: Complemental strand, 52254180 - 52254148
Alignment:
Q  489 acaacttttacgacaactttctctctcatactc 521  Q
    |||||||||| ||||||||||||||||||||||    
T  52254180 acaacttttatgacaactttctctctcatactc 52254148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 522
Target Start/End: Original strand, 53718057 - 53718110
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactca 522  Q
    |||||| |||||||||  ||| |||||||||  |||||||||||||||||||||||    
T  53718057 atatttaaacatccattttgtgacaactttt--gacaactttctctctcatactca 53718110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 34040563 - 34040507
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  ||| | ||||||||| |||||||||||||||||||||||    
T  34040563 atatttgaacatccattttgtgataacttttacaacaactttctctctcatactcac 34040507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 36577475 - 36577419
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  ||| ||||||||| | |||||||||||||||||||||||    
T  36577475 atatttgaacatccattttgtgacaacttttgcaacaactttctctctcatactcac 36577419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 3603119 - 3603175
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||   || ||||||||| | |||||||||||||||||||||||    
T  3603119 atatttgaacatccatttagtgacaacttttgcaacaactttctctctcatactcac 3603175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 8411781 - 8411725
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||   || ||||||||| | |||||||||||||||||||||||    
T  8411781 atatttgaacatccatttagtgacaacttttgcaacaactttctctctcatactcac 8411725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 10890109 - 10890053
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  | | |||||||||  ||||||||||||||||||||||||    
T  10890109 atatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcac 10890053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 13489670 - 13489726
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  | | |||||||||  ||||||||||||||||||||||||    
T  13489670 atatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcac 13489726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 15705125 - 15705069
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  | | |||||||||  ||||||||||||||||||||||||    
T  15705125 atatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcac 15705069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 20565181 - 20565125
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||   ||||||| |||| | |||||||||||||||||||||||    
T  20565181 atatttgaacatccatttagtaacaatttttgcaacaactttctctctcatactcac 20565125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 33054151 - 33054095
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    |||||||||||| |||  ||| ||||||||| | |||||||||||||||||||||||    
T  33054151 atatttgaacattcattttgtgacaacttttgctacaactttctctctcatactcac 33054095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 35136852 - 35136908
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  ||| ||||||||| | |||||||||| ||||||||||||    
T  35136852 atatttgaacatccattttgtgacaacttttgcaacaactttctttctcatactcac 35136908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 43893265 - 43893321
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  ||| |||||||||| ||||| ||||||||||||| ||||    
T  43893265 atatttgaacatccattttgtcacaacttttatgacaattttctctctcatattcac 43893321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 52362490 - 52362546
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  | | |||||||||  ||||||||||||||||||||||||    
T  52362490 atatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcac 52362546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 649776 - 649832
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||| ||||  | | |||||||||  ||||||||||||||||||||||||    
T  649776 atatttgaacaaccatttttttacaacttttgtgacaactttctctctcatactcac 649832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 756864 - 756920
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||   || ||||||||| | |||||||||| ||||||||||||    
T  756864 atatttgaacatccatttagtgacaacttttgcaacaactttctttctcatactcac 756920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 902646 - 902702
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||| ||   || ||||||||||  |||||||||||||||||||||||    
T  902646 atatttgaacatctatttagtgacaacttttataacaactttctctctcatactcac 902702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 1853014 - 1852958
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||| ||   || ||||||||| | |||||||||||||||||||||||    
T  1853014 atatttgaacatctatttagtgacaacttttgcaacaactttctctctcatactcac 1852958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 9567024 - 9566968
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||| ||||  | | |||||||||  ||||||||||||||||||||||||    
T  9567024 atatttgaacaaccattttttgacaacttttgtgacaactttctctctcatactcac 9566968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 16658446 - 16658501
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||| ||| ||| | ||| |||||||||| ||||||||||||||||||||||||    
T  16658446 atatttgtacaaccacattgtgacaactttta-gacaactttctctctcatactcac 16658501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 20288403 - 20288347
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||| |||||||   ||| |||||||||  ||||||||||||||||||||||||    
T  20288403 atatttgtacatccaatttgtgacaactttttagacaactttctctctcatactcac 20288347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 21433464 - 21433408
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||| ||| ||||  |||||||||||||  ||||||||||||||| ||||||||    
T  21433464 atatttgtacaaccattttgtaacaacttttgtgacaactttctctcttatactcac 21433408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 26837460 - 26837516
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    |||||||||||||||    |||||||||||| | |||| ||||||||||||||||||    
T  26837460 atatttgaacatccacttagtaacaacttttgcaacaattttctctctcatactcac 26837516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 32915135 - 32915079
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||| ||  | | |||||||||  ||||||||||||||||||||||||    
T  32915135 atatttgaacatctattttatgacaacttttgtgacaactttctctctcatactcac 32915079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 33024634 - 33024578
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||| ||   || ||||||||| | |||||||||||||||||||||||    
T  33024634 atatttgaacatctatttagtgacaacttttgcaacaactttctctctcatactcac 33024578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 487 - 523
Target Start/End: Original strand, 33076147 - 33076183
Alignment:
Q  487 taacaacttttacgacaactttctctctcatactcac 523  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  33076147 taacaacttttatgacaactttctctatcatactcac 33076183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 44789206 - 44789150
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  ||| |||||||||   |||||||||||| ||||||||||    
T  44789206 atatttgaacatccattttgtgacaacttttgttacaactttctctttcatactcac 44789150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 491 - 523
Target Start/End: Original strand, 45640332 - 45640364
Alignment:
Q  491 aacttttacgacaactttctctctcatactcac 523  Q
    |||||||| ||||||||||||||||||||||||    
T  45640332 aacttttatgacaactttctctctcatactcac 45640364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 46082184 - 46082128
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||   || ||||||||| | ||||||||||||| |||||||||    
T  46082184 atatttgaacatccatttagtgacaacttttgcaacaactttctctcgcatactcac 46082128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 47214216 - 47214272
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||| ||  | | |||||||||  ||||||||||||||||||||||||    
T  47214216 atatttgaacatctattttatgacaacttttgtgacaactttctctctcatactcac 47214272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 48983731 - 48983675
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||| ||||  | | |||||||||  ||||||||||||||||||||||||    
T  48983731 atatttgaacaaccattttttgacaacttttgtgacaactttctctctcatactcac 48983675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 50433777 - 50433833
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||| ||   || |||||||||| ||||||||||||||| ||||||||    
T  50433777 atatttgaacatcgatttggtcacaacttttatgacaactttctctcttatactcac 50433833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 52714964 - 52714908
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  | |||||||||||  ||||| ||||| ||||||||||||    
T  52714964 atatttgaacatccattttataacaacttttgtgacaattttctttctcatactcac 52714908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000008; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 467 - 520
Target Start/End: Complemental strand, 15368886 - 15368833
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatact 520  Q
    ||||||||||||||||  |||||||||||||   ||||||||||||||||||||    
T  15368886 atatttgaacatccattttgtaacaacttttgttacaactttctctctcatact 15368833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 2777379 - 2777323
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||   |||||||||||| | |||| ||||||||||||||||||    
T  2777379 atatttgaacatccatttagtaacaacttttgcaacaattttctctctcatactcac 2777323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 6531246 - 6531190
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  ||| ||||||| |  ||||||||||||||||||||||||    
T  6531246 atatttgaacatccattttgtgacaacttatgggacaactttctctctcatactcac 6531190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 20822931 - 20822875
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  | | |||||||||  ||||||||||||||||||||||||    
T  20822931 atatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcac 20822875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 467 - 522
Target Start/End: Complemental strand, 5327655 - 5327600
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactca 522  Q
    ||||||||||||||||   || ||||||||||  ||||||||||||||||||||||    
T  5327655 atatttgaacatccatttagtgacaacttttataacaactttctctctcatactca 5327600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 754501 - 754445
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    |||||||||||| |||  ||| ||||||||| | |||||||| ||||||||||||||    
T  754501 atatttgaacattcattttgtgacaacttttgcaacaactttttctctcatactcac 754445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 2075514 - 2075458
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||   || ||| ||||| | |||||||||||||||||||||||    
T  2075514 atatttgaacatccatttagtgacagcttttgcaacaactttctctctcatactcac 2075458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 4820259 - 4820315
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||   || | ||||||| | |||||||||||||||||||||||    
T  4820259 atatttgaacatccatttagtgataacttttgcaacaactttctctctcatactcac 4820315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 13143445 - 13143389
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    |||||||||||| |||  ||| |||| |||| | |||||||||||||||||||||||    
T  13143445 atatttgaacattcattttgtgacaatttttgcaacaactttctctctcatactcac 13143389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 15318251 - 15318195
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  ||| |||||||||   |||||||||||||||||| ||||    
T  15318251 atatttgaacatccattttgtgacaacttttgttacaactttctctctcatattcac 15318195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 22341237 - 22341181
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||   ||||||||||||  || ||| |||||||||||||||||    
T  22341237 atatttgaacatccatttggtaacaacttttgtgataacattctctctcatactcac 22341181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 30152593 - 30152537
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    |||||||||||| |||   || ||||||||| | |||||||||||||||||||||||    
T  30152593 atatttgaacattcatttagtgacaacttttgcaacaactttctctctcatactcac 30152537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 32046706 - 32046762
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||| ||  ||||||||||| |  |||||| |||||||||||||||||    
T  32046706 atatttgaacatcaattttgtaacaacttatgtgacaaccttctctctcatactcac 32046762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 32459580 - 32459524
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  | | |||||||||  ||||||||||||||||||| ||||    
T  32459580 atatttgaacatccattttatgacaacttttgtgacaactttctctctcatattcac 32459524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 33421768 - 33421824
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  ||| |||||||||   |||||||||||| ||||||||||    
T  33421768 atatttgaacatccattttgtgacaacttttgttacaactttctctttcatactcac 33421824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 34570658 - 34570602
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||| ||| ||||  ||||| |||||||  ||||||||||||||||||||||||    
T  34570658 atatttgtacaaccattttgtaataacttttgtgacaactttctctctcatactcac 34570602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Complemental strand, 35213624 - 35213568
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||| ||  ||| |||||||||   |||||||||||||||||||||||    
T  35213624 atatttgaacatctattttgtgacaacttttgtaacaactttctctctcatactcac 35213568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0532 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 10972 - 11028
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||  ||  |||||||||  ||||||||||||||||||||||||    
T  10972 atatttgaacatccattttgggacaacttttgtgacaactttctctctcatactcac 11028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 19644 - 19700
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    ||||||||||||||||   || ||||||||| | |||||||||||||||||||||||    
T  19644 atatttgaacatccatttagtgacaacttttgcaacaactttctctctcatactcac 19700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 8480 - 8536
Alignment:
Q  467 atatttgaacatccatactgtaacaacttttacgacaactttctctctcatactcac 523  Q
    |||||||||||  |||  | |||||| ||||| ||||||||||||||||||||||||    
T  8480 atatttgaacaatcattttttaacaatttttatgacaactttctctctcatactcac 8536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 491 - 523
Target Start/End: Original strand, 49326 - 49358
Alignment:
Q  491 aacttttacgacaactttctctctcatactcac 523  Q
    |||||||| ||||||||||||||||||||||||    
T  49326 aacttttatgacaactttctctctcatactcac 49358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University