View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12791_low_5 (Length: 281)
Name: NF12791_low_5
Description: NF12791
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12791_low_5 |
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Alignment Details
Target: chr5 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 21 - 270
Target Start/End: Complemental strand, 15946032 - 15945783
Alignment:
| Q |
21 |
cttccctcaccaattgcaattccttctcagcattttcaagaaagtggttcatctctctcacaaactttcctcctttaccattatttccacactgcaaaac |
120 |
Q |
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| T |
15946032 |
cttccctcaccaattgcaattccttctcagcattttcaagaaagtggttcatctctctcacaaactttcctcctttaccattatttccacactgcaaaac |
15945933 |
T |
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| Q |
121 |
aagttgtcgaatttcaactatccttgctgagagtgctgagatagaaccaacaaaactattgtaatctgttagagcaactttctttacattggaaaactcg |
220 |
Q |
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| T |
15945932 |
tagttgtcgaatatcaactatccttgctgagagtgctgagatagaaccaacaaagctattgtaatctgttagagcaactttctttacattggaaaactcg |
15945833 |
T |
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| Q |
221 |
gaactgacccctcctacaattgctaatcctagtgttgtatattccctttg |
270 |
Q |
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| T |
15945832 |
gaactgacccctcctacaattgctaatcctagtgttgtatattccctttg |
15945783 |
T |
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