View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12792_high_2 (Length: 388)
Name: NF12792_high_2
Description: NF12792
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12792_high_2 |
 | |
|
| [»] chr6 (26 HSPs) |
| |
|
| [»] scaffold0294 (1 HSPs) |
| | |
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| [»] chr4 (23 HSPs) |
| |
|
| [»] chr3 (6 HSPs) |
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| [»] chr2 (2 HSPs) |
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| [»] scaffold0813 (2 HSPs) |
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| [»] scaffold0286 (2 HSPs) |
| | |
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| [»] scaffold0552 (2 HSPs) |
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| [»] scaffold0373 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 310; Significance: 1e-174; HSPs: 26)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 19 - 388
Target Start/End: Original strand, 5096380 - 5096749
Alignment:
| Q |
19 |
agtgagtcattgtaattgtttccatttattttttgatgagtcttccttaagtttacgtttgacatgtctgttcttgcagaggatggaaaaactgaaaatt |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5096380 |
agtgagtcattgtaattgtttccatttattttttgaagagtcttccttaagtttatctttgacatgtctgttcttgcagaggatggaaaaactgaaaatt |
5096479 |
T |
|
| Q |
119 |
ctaaatcttagtcattctcattgtctgatacacaccccagacttttcatacatgcctaatcttgagaagctggtacttaaagattgtccaatgttgtctg |
218 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5096480 |
ctaaatcttagtcattctcattgtctgacacacaccccagacttttcatacatgcctaatcttgagaagctggtacttaaagattgtccaatgttgtctg |
5096579 |
T |
|
| Q |
219 |
aggtttctcctaccattggagatctcactgaaatacttctaatagatttggaagattgtgttggccttcgtagccttccaggaagcatctataagttgaa |
318 |
Q |
| |
|
|||||||||||| ||||||| |||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5096580 |
aggtttctcctagcattggaaatctcagtgaaattcttctaatagatttggaagattgtgttagccttcgtagccttccaggaagcatctataagttgaa |
5096679 |
T |
|
| Q |
319 |
atctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttggaacaaatg |
388 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||| || |||||||||||||| | ||||||||| |
|
|
| T |
5096680 |
atctctgaaaactctcattctttctgggtgtataatgattgacgagttggaagaggacatagaacaaatg |
5096749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 25 - 388
Target Start/End: Complemental strand, 5103017 - 5102654
Alignment:
| Q |
25 |
tcattgtaattgtttccatttattttttgatgagtcttccttaagtttacgtttgacatgtctgttcttgcagaggatggaaaaactgaaaattctaaat |
124 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||| |
|
|
| T |
5103017 |
tcattgtaattgtttccatttattttttgaagagtcttccttaagtttacctttgacatgtctgttcttgcagaggttggaaaagctgaaaattctaaat |
5102918 |
T |
|
| Q |
125 |
cttagtcattctcattgtctgatacacaccccagacttttcatacatgcctaatcttgagaagctggtacttaaagattgtccaatgttgtctgaggttt |
224 |
Q |
| |
|
|||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
5102917 |
cttagtcattctcattgtctgacgcacacccctgacttttcatacttgcctaatcttgagaagctggtactcaaagattgtccaatgttgtctgaggttt |
5102818 |
T |
|
| Q |
225 |
ctcctaccattggagatctcactgaaatacttctaatagatttggaagattgtgttggccttcgtagccttccaggaagcatctataagttgaaatctct |
324 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| | |
|
|
| T |
5102817 |
gtcctaccattggagatctcactgaaatacttctaatagatttggaagattgtgttagccttcgtagccttccaagaagcatctataagttgaaatcttt |
5102718 |
T |
|
| Q |
325 |
gaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttggaacaaatg |
388 |
Q |
| |
|
||||| ||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| |
|
|
| T |
5102717 |
gaaaatactcattctttctgggtgtttaatgattgacaagttggaagacgacttggaacaaatg |
5102654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 26 - 376
Target Start/End: Complemental strand, 5158031 - 5157680
Alignment:
| Q |
26 |
cattgtaattgtttccatttatttttt-gatgagtcttccttaagtttacgtttgacatgtctgttcttgcagaggatggaaaaactgaaaattctaaat |
124 |
Q |
| |
|
|||||| || ||||||||| |||||| || | ||||||||||||||| | ||||||||||||||||||||||| ||||||||| || |||||||||||| |
|
|
| T |
5158031 |
cattgttatcgtttccattatttttttcgaagtgtcttccttaagtttccctttgacatgtctgttcttgcagatgatggaaaagctaaaaattctaaat |
5157932 |
T |
|
| Q |
125 |
cttagtcattctcattgtctgatacacaccccagacttttcatacatgcctaatcttgagaagctggtacttaaagattgtccaatgttgtctgaggttt |
224 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
5157931 |
cttagtcattctcattgtctgacgcacaccccagacttttcatacatgcctaatcttgagaagctggtactcaaagattgtccaatgttgtctgaggttt |
5157832 |
T |
|
| Q |
225 |
ctcctaccattggagatctcactgaaatacttctaatagatttggaagattgtgttggccttcgtagccttccaggaagcatctataagttgaaatctct |
324 |
Q |
| |
|
|||||| ||||||| |||||| |||||| ||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||| |
|
|
| T |
5157831 |
ctcctagcattggaaatctcagtgaaattcttctaatagatttggaagattgtgttagccttcgaagccttccaagaagcatctataagttgaaatctct |
5157732 |
T |
|
| Q |
325 |
gaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggac |
376 |
Q |
| |
|
||||| | | |||||||| |||||| ||||||| ||||||||||||||||| |
|
|
| T |
5157731 |
gaaaattttaattctttcagggtgtataatgattgacaagttggaagaggac |
5157680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 33 - 388
Target Start/End: Complemental strand, 5067089 - 5066734
Alignment:
| Q |
33 |
attgtttccatttattttttgatgagtcttccttaagtttacgtttgacatgtctgttcttgcagaggatggaaaaactgaaaattctaaatcttagtca |
132 |
Q |
| |
|
|||| |||||||||||||| || ||||| ||||||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |
|
|
| T |
5067089 |
attgcttccatttatttttcgaagagtcgtccttaagtttccctttgacatgtctgttcttgcagaggatggaaaagctgaaaattctaaatcttagcca |
5066990 |
T |
|
| Q |
133 |
ttctcattgtctgatacacaccccagacttttcatacatgcctaatcttgagaagctggtacttaaagattgtccaatgttgtctgaggtttctcctacc |
232 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||| ||||| |||||||||||||| ||||| |||||||||||||| |
|
|
| T |
5066989 |
ttctcattgtctgatgcacacccctgacttttcatatatgcctaatcttgaaaagctagtactcaaagattgtccaatattgtccgaggtttctcctaca |
5066890 |
T |
|
| Q |
233 |
attggagatctcactgaaatacttctaatagatttggaagattgtgttggccttcgtagccttccaggaagcatctataagttgaaatctctgaaaactc |
332 |
Q |
| |
|
|| ||| | |||| |||||| ||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||| ||||||| |
|
|
| T |
5066889 |
ataggaaaactcagtgaaattcttctaatagatttggaagattgtgttagccttcgtaaccttccaagaagcatctataagttgaaatctcttaaaactc |
5066790 |
T |
|
| Q |
333 |
tcattctttctgggtgttcaatgattcacaagttggaagaggacttggaacaaatg |
388 |
Q |
| |
|
||||||||||||||||| ||||||| ||||||| ||||||||| | ||||||||| |
|
|
| T |
5066789 |
tcattctttctgggtgtataatgattgacaagttagaagaggacatagaacaaatg |
5066734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 18 - 388
Target Start/End: Original strand, 5425581 - 5425951
Alignment:
| Q |
18 |
aagtgagtcattgtaattgtttccatttattttttgatgagtcttccttaagtttacgtttgacatgtctgttcttgcagaggatggaaaaactgaaaat |
117 |
Q |
| |
|
||||||| |||||| |||| |||||||||||||| | ||||| ||||||||||| | ||||||||| ||||| |||||| |||||||||| |||||||| |
|
|
| T |
5425581 |
aagtgagacattgttattgcttccatttatttttcaaagagtcgtccttaagtttccttttgacatgactgtttttgcagtggatggaaaagctgaaaat |
5425680 |
T |
|
| Q |
118 |
tctaaatcttagtcattctcattgtctgatacacaccccagacttttcatacatgcctaatcttgagaagctggtacttaaagattgtccaatgttgtct |
217 |
Q |
| |
|
||||||||||||||||||||||||||||| | |||||| |||||| ||| ||||||||||||||| |||||||| || ||||||||||||||||||||| |
|
|
| T |
5425681 |
tctaaatcttagtcattctcattgtctgacgcgcacccctgactttacattcatgcctaatcttgaaaagctggtgctcaaagattgtccaatgttgtct |
5425780 |
T |
|
| Q |
218 |
gaggtttctcctaccattggagatctcactgaaatacttctaatagatttggaagattgtgttggccttcgtagccttccaggaagcatctataagttga |
317 |
Q |
| |
|
||| ||||||||| ||||||| |||||| ||||| ||||||||| |||| |||||||||||| |||||| ||||||||| ||| |||||||||||||| |
|
|
| T |
5425781 |
gagatttctcctagcattggaaatctcagagaaattcttctaataaatttagaagattgtgttcgccttcaaagccttccaagaaacatctataagttga |
5425880 |
T |
|
| Q |
318 |
aatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttggaacaaatg |
388 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| | ||||||||| |
|
|
| T |
5425881 |
aatctctgaaaactctcattctttctgggtgtgtaatgattgacaagttggaagaggacatagaacaaatg |
5425951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 26 - 388
Target Start/End: Original strand, 5350075 - 5350435
Alignment:
| Q |
26 |
cattgtaattgtttccatttattttttgatgagtcttccttaagtttacgtttgacatgtctgttcttgcagaggatggaaaaactgaaaattctaaatc |
125 |
Q |
| |
|
|||||| |||| |||||||||||||| || |||| ||||||||||| | |||||||| |||||| || || |||||||||| |||||||||||||||| |
|
|
| T |
5350075 |
cattgttattgcttccatttatttttcgaagagttgtccttaagtttccctttgacatttctgtttttaaagtggatggaaaagctgaaaattctaaatc |
5350174 |
T |
|
| Q |
126 |
ttagtcattctcattgtctgatacacaccccagacttttcatacatgcctaatcttgagaagctggtacttaaagattgtccaatgttgtctgaggtttc |
225 |
Q |
| |
|
||||||||||| |||||||| |||||||| |||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||| |||||||| |
|
|
| T |
5350175 |
ttagtcattcttgttgtctgacacacaccc--gacttttcatacatgcctaatcttgaaaagctagtactcaaagattgtccaatgttgtccgaggtttc |
5350272 |
T |
|
| Q |
226 |
tcctaccattggagatctcactgaaatacttctaatagatttggaagattgtgttggccttcgtagccttccaggaagcatctataagttgaaatctctg |
325 |
Q |
| |
|
||||| |||||||||||||| |||||| ||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||| ||||||||||||||| |
|
|
| T |
5350273 |
tcctagcattggagatctcagtgaaattcttctaatagatttggaggattgtgttagccttcaaagccttccaagaagcatctttaagttgaaatctctc |
5350372 |
T |
|
| Q |
326 |
aaaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttggaacaaatg |
388 |
Q |
| |
|
||||||||||||||||| |||||| ||||||| ||||||||||||||||| | ||||||||| |
|
|
| T |
5350373 |
aaaactctcattctttcagggtgtataatgattgacaagttggaagaggacatagaacaaatg |
5350435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 77 - 385
Target Start/End: Complemental strand, 5244218 - 5243910
Alignment:
| Q |
77 |
ttgacatgtctgttcttgcagaggatggaaaaactgaaaattctaaatcttagtcattctcattgtctgatacacaccccagacttttcatacatgccta |
176 |
Q |
| |
|
|||||||||||||||||| || ||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | | |
|
|
| T |
5244218 |
ttgacatgtctgttcttgtggatgatggaaaagctaaaaattctaaatcttagtcattctcattgtctgacgcacaccccagacttttcatacatgtcaa |
5244119 |
T |
|
| Q |
177 |
atcttgagaagctggtacttaaagattgtccaatgttgtctgaggtttctcctaccattggagatctcactgaaatacttctaatagatttggaagattg |
276 |
Q |
| |
|
||||||| ||||| ||||| ||||||||| || ||||||| ||| ||||||||| |||||| |||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
5244118 |
atcttgaaaagctagtactcaaagattgttcagtgttgtccgagatttctcctagcattgggaatctcagtgaaattcttctaatagatttggaagattg |
5244019 |
T |
|
| Q |
277 |
tgttggccttcgtagccttccaggaagcatctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggac |
376 |
Q |
| |
|
|||| ||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||| || |||||| ||||||| | ||||||||||||||| |
|
|
| T |
5244018 |
tgttagccttcgaagccttccaagaagcatctataagttgaaatctctgaaaactttcattctctcagggtgtataatgattgagaagttggaagaggac |
5243919 |
T |
|
| Q |
377 |
ttggaacaa |
385 |
Q |
| |
|
||||||||| |
|
|
| T |
5243918 |
ttggaacaa |
5243910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 76 - 384
Target Start/End: Original strand, 5447316 - 5447624
Alignment:
| Q |
76 |
tttgacatgtctgttcttgcagaggatggaaaaactgaaaattctaaatcttagtcattctcattgtctgatacacaccccagacttttcatacatgcct |
175 |
Q |
| |
|
|||||||| | |||||||||||||||||||||| ||||||| ||| |||||||||||||||||| |||||| | ||| ||| |||||||||| | ||||| |
|
|
| T |
5447316 |
tttgacatttttgttcttgcagaggatggaaaatctgaaaaatctcaatcttagtcattctcatcgtctgacaaacatcccggacttttcatgcttgcct |
5447415 |
T |
|
| Q |
176 |
aatcttgagaagctggtacttaaagattgtccaatgttgtctgaggtttctcctaccattggagatctcactgaaatacttctaatagatttggaagatt |
275 |
Q |
| |
|
|||||||| ||||| ||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| | |||| ||||| ||| |||||||||||| |
|
|
| T |
5447416 |
aatcttgaaaagctagtactcaaagattgtccaatgttgtctgaggtttctcctagcattggacatctcaataaaattcttctgataaatttggaagatt |
5447515 |
T |
|
| Q |
276 |
gtgttggccttcgtagccttccaggaagcatctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagagga |
375 |
Q |
| |
|
|| ||||||| ||| ||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| |||| || |||| ||||| |||||||||| |
|
|
| T |
5447516 |
gtattggcctaggtaacctcccaagaagcatctataagttgaaatctttgaaaactctcattctttctggttgtttaaagattgacaagctggaagagga |
5447615 |
T |
|
| Q |
376 |
cttggaaca |
384 |
Q |
| |
|
||||||||| |
|
|
| T |
5447616 |
cttggaaca |
5447624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 58 - 375
Target Start/End: Original strand, 5370282 - 5370599
Alignment:
| Q |
58 |
gtcttccttaagtttacgtttgacatgtctgttcttgcagaggatggaaaaactgaaaattctaaatcttagtcattctcattgtctgatacacacccca |
157 |
Q |
| |
|
||||||||||||||| | |||||| ||| |||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
5370282 |
gtcttccttaagtttccctttgacttgtttgttcttgcagatgatggaaaagctaaaaattctaaatcttagtcattctcattgtctgacgcacacccca |
5370381 |
T |
|
| Q |
158 |
gacttttcatacatgcctaatcttgagaagctggtacttaaagattgtccaatgttgtctgaggtttctcctaccattggagatctcactgaaatacttc |
257 |
Q |
| |
|
|||||||||||| ||||||| ||||| ||| | ||||| ||||||||| ||||| |||||||||||||||||| |||||| ||||| ||||| |||| |
|
|
| T |
5370382 |
gacttttcatacttgcctaagcttgaaaagttagtactcaaagattgttcaatgctgtctgaggtttctcctagcattgggaatctcggcgaaattcttc |
5370481 |
T |
|
| Q |
258 |
taatagatttggaagattgtgttggccttcgtagccttccaggaagcatctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgat |
357 |
Q |
| |
|
|||||||||| |||||||||||| ||||||||| ||||||| ||||||| ||||||||||||||||| || ||||| |||||||| |||||| |||||| |
|
|
| T |
5370482 |
taatagattttgaagattgtgttagccttcgtaaccttccaagaagcatttataagttgaaatctctaaagactcttattctttcagggtgtgtaatgat |
5370581 |
T |
|
| Q |
358 |
tcacaagttggaagagga |
375 |
Q |
| |
|
| | |||||||||||||| |
|
|
| T |
5370582 |
tgagaagttggaagagga |
5370599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 87 - 388
Target Start/End: Complemental strand, 5128758 - 5128457
Alignment:
| Q |
87 |
tgttcttgcagaggatggaaaaactgaaaattctaaatcttagtcattctcattgtctgatacacaccccagacttttcatacatgcctaatcttgagaa |
186 |
Q |
| |
|
|||||||||||| |||||| || ||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||||||| || |
|
|
| T |
5128758 |
tgttcttgcagatgatggagaagctgaaaattctcaatcatagtcattctcattgtctgacacacaccccagacttttcatatttacctaatcttgaaaa |
5128659 |
T |
|
| Q |
187 |
gctggtacttaaagattgtccaatgttgtctgaggtttctcctaccattggagatctcactgaaatacttctaatagatttggaagattgtgttggcctt |
286 |
Q |
| |
|
||| ||||| ||||||||| |||||||||||||||||||| ||| ||| ||| |||||| | |||| ||||| ||| ||||||||||||| || |||| |
|
|
| T |
5128658 |
gctagtactcaaagattgttcaatgttgtctgaggtttctactagcatcggacatctcaataaaattcttctgataaatttggaagattgcattagccta |
5128559 |
T |
|
| Q |
287 |
cgtagccttccaggaagcatctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttggaacaaa |
386 |
Q |
| |
|
||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||| |
|
|
| T |
5128558 |
tgtagcctcccaagaagcatctataagttgaaatctttgaaaactctcattctttctggttgtataatgattgacaagttggaagaggacttggaacaaa |
5128459 |
T |
|
| Q |
387 |
tg |
388 |
Q |
| |
|
|| |
|
|
| T |
5128458 |
tg |
5128457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 87 - 388
Target Start/End: Original strand, 5278306 - 5278607
Alignment:
| Q |
87 |
tgttcttgcagaggatggaaaaactgaaaattctaaatcttagtcattctcattgtctgatacacaccccagacttttcatacatgcctaatcttgagaa |
186 |
Q |
| |
|
||||||||||||||||||| || ||||||||||| ||||||||||||||||||| ||||| | | ||||||||||||||| |||||||||||||||| || |
|
|
| T |
5278306 |
tgttcttgcagaggatggagaagctgaaaattcttaatcttagtcattctcattatctgacagagaccccagacttttcaaacatgcctaatcttgaaaa |
5278405 |
T |
|
| Q |
187 |
gctggtacttaaagattgtccaatgttgtctgaggtttctcctaccattggagatctcactgaaatacttctaatagatttggaagattgtgttggcctt |
286 |
Q |
| |
|
||| |||| | |||||| |||| ||||| ||||||||||| || ||||||| ||||| | |||| ||||| ||| | |||||||||||| || ||||| |
|
|
| T |
5278406 |
gcttatactcatagattgcccaaggttgtgtgaggtttctcatagcattggatatctcgataaaattcttctgataaacttggaagattgtattagcctt |
5278505 |
T |
|
| Q |
287 |
cgtagccttccaggaagcatctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttggaacaaa |
386 |
Q |
| |
|
| || |||||| |||| |||||||||||||||||| ||||||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |
|
|
| T |
5278506 |
cagagtcttccaagaagtatctataagttgaaatctttgaaaacactcattctttctgggtgttcgatgattgacaagttggaagaggacttggaacaaa |
5278605 |
T |
|
| Q |
387 |
tg |
388 |
Q |
| |
|
|| |
|
|
| T |
5278606 |
tg |
5278607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 89 - 388
Target Start/End: Complemental strand, 5690498 - 5690199
Alignment:
| Q |
89 |
ttcttgcagaggatggaaaaactgaaaattctaaatcttagtcattctcattgtctgatacacaccccagacttttcatacatgcctaatcttgagaagc |
188 |
Q |
| |
|
|||||| ||| |||||| || || |||||||| ||||||||||| ||||||| ||||| ||| ||||||||||||||| ||||||||||||||| |||| |
|
|
| T |
5690498 |
ttcttgtagatgatggagaagcttaaaattctcaatcttagtcactctcattatctgacacagaccccagacttttcaatcatgcctaatcttgaaaagc |
5690399 |
T |
|
| Q |
189 |
tggtacttaaagattgtccaatgttgtctgaggtttctcctaccattggagatctcactgaaatacttctaatagatttggaagattgtgttggccttcg |
288 |
Q |
| |
|
| |||| ||||||||||||| |||| ||||||||| | || ||||||| ||||| |||| ||||| ||| |||||||||||||| || ||||| |
|
|
| T |
5690398 |
taatactcaaagattgtccaaggttgcgtgaggtttcccatagcattggacatctcgacaaaattcttctgataaatttggaagattgtattagcctttc |
5690299 |
T |
|
| Q |
289 |
tagccttccaggaagcatctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttggaacaaatg |
388 |
Q |
| |
|
|| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
5690298 |
taaccttccaagaagcatctataagttgaaatctctgaaaactctcattctttccgggtgttcaatgattaacaagttggaagaggacttggaacaaatg |
5690199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 87 - 388
Target Start/End: Original strand, 5176479 - 5176780
Alignment:
| Q |
87 |
tgttcttgcagaggatggaaaaactgaaaattctaaatcttagtcattctcattgtctgatacacaccccagacttttcatacatgcctaatcttgagaa |
186 |
Q |
| |
|
||||||||||||||||||| || ||||||||||| ||||||||||||||||||| ||||| | | ||||||||||||||| |||||||||||||||| || |
|
|
| T |
5176479 |
tgttcttgcagaggatggagaagctgaaaattcttaatcttagtcattctcattatctgacagagaccccagacttttcaaacatgcctaatcttgaaaa |
5176578 |
T |
|
| Q |
187 |
gctggtacttaaagattgtccaatgttgtctgaggtttctcctaccattggagatctcactgaaatacttctaatagatttggaagattgtgttggcctt |
286 |
Q |
| |
|
||| |||| | |||||| |||| |||| ||||||||| | || ||||||| ||||| | |||| ||||| ||| | |||||||||||| || ||||| |
|
|
| T |
5176579 |
gcttatactcatagattgcccaaggttgcgtgaggtttcccatagcattggacatctcgataaaattcttctgataaacttggaagattgtattagcctt |
5176678 |
T |
|
| Q |
287 |
cgtagccttccaggaagcatctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttggaacaaa |
386 |
Q |
| |
|
| || |||||| |||| |||||||||||||||||| ||||||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |
|
|
| T |
5176679 |
cagagtcttccaagaagtatctataagttgaaatctttgaaaacactcattctttctgggtgttcgatgattgacaagttggaagaggacttggaacaaa |
5176778 |
T |
|
| Q |
387 |
tg |
388 |
Q |
| |
|
|| |
|
|
| T |
5176779 |
tg |
5176780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 87 - 388
Target Start/End: Original strand, 5383066 - 5383367
Alignment:
| Q |
87 |
tgttcttgcagaggatggaaaaactgaaaattctaaatcttagtcattctcattgtctgatacacaccccagacttttcatacatgcctaatcttgagaa |
186 |
Q |
| |
|
||||||||||||||||||| | ||||||||| ||||| |||||||||||||||| ||| | || ||||||||||| ||| | ||||||||||||| || |
|
|
| T |
5383066 |
tgttcttgcagaggatggagatactgaaaatcctaaaccttagtcattctcattacctggtgcagaccccagacttctcaaatttgcctaatcttgaaaa |
5383165 |
T |
|
| Q |
187 |
gctggtacttaaagattgtccaatgttgtctgaggtttctcctaccattggagatctcactgaaatacttctaatagatttggaagattgtgttggcctt |
286 |
Q |
| |
|
||| ||||| ||||||||| | |||||| ||||||||||||| |||||||||||||| |||| ||||| || |||||||||| |||||| |||| |
|
|
| T |
5383166 |
gctagtactcgcagattgtccgaggttgtccgaggtttctcctagcattggagatctcaagaaaattcttctgattaatttggaagactgtgttagccta |
5383265 |
T |
|
| Q |
287 |
cgtagccttccaggaagcatctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttggaacaaa |
386 |
Q |
| |
|
||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||| |||| || |||| |||||||||||||||| | ||||||| |
|
|
| T |
5383266 |
tgtagcctcccaagaagcatttataagttgaaatctctgaaaactctcattctttctggttgtttaaagattaccaagttggaagaggacatagaacaaa |
5383365 |
T |
|
| Q |
387 |
tg |
388 |
Q |
| |
|
|| |
|
|
| T |
5383366 |
tg |
5383367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 82 - 385
Target Start/End: Complemental strand, 5354960 - 5354657
Alignment:
| Q |
82 |
atgtctgttcttgcagaggatggaaaaactgaaaattctaaatcttagtcattctcattgtctgatacacaccccagacttttcatacatgcctaatctt |
181 |
Q |
| |
|
|||| ||||||||||||| ||||| | ||||||||||| |||||||||||||| |||||||||| ||| ||||| |||||||| ||||||||||||||| |
|
|
| T |
5354960 |
atgtatgttcttgcagagaatggagcatctgaaaattctcaatcttagtcattcacattgtctgacacatacccctgacttttcttacatgcctaatctt |
5354861 |
T |
|
| Q |
182 |
gagaagctggtacttaaagattgtccaatgttgtctgaggtttctcctaccattggagatctcactgaaatacttctaatagatttggaagattgtgttg |
281 |
Q |
| |
|
|| ||||| ||||| ||||||||||||||||| ||||| |||||||| | ||||||| |||||| | |||| ||||| ||| |||| |||| || || |
|
|
| T |
5354860 |
gaaaagcttgtactcaaagattgtccaatgttatctgaagtttctccaagcattggacatctcaataaaattcttctgataaatttcaaagactgcatta |
5354761 |
T |
|
| Q |
282 |
gccttcgtagccttccaggaagcatctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttgga |
381 |
Q |
| |
|
|||| |||||| ||| |||||||||| |||||||||||| |||||||||||||||||||||| ||| || | | |||||||||||||||||||||| |
|
|
| T |
5354760 |
acctttctagcctcccaagaagcatctacaagttgaaatctttgaaaactctcattctttctggttgtaaaaagttagacaagttggaagaggacttgga |
5354661 |
T |
|
| Q |
382 |
acaa |
385 |
Q |
| |
|
|||| |
|
|
| T |
5354660 |
acaa |
5354657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 95 - 384
Target Start/End: Complemental strand, 5074241 - 5073952
Alignment:
| Q |
95 |
cagaggatggaaaaactgaaaattctaaatcttagtcattctcattgtctgatacacaccccagacttttcatacatgcctaatcttgagaagctggtac |
194 |
Q |
| |
|
|||||| |||| || |||||||| || ||||||||||||||||||| ||||| || || ||||| |||||| || ||||||||||||| | || |||| |
|
|
| T |
5074241 |
cagaggttggagaagctgaaaatactcaatcttagtcattctcattatctgacgcaaactccagatttttcaaacttgcctaatcttgaacaactagtac |
5074142 |
T |
|
| Q |
195 |
ttaaagattgtccaatgttgtctgaggtttctcctaccattggagatctcactgaaatacttctaatagatttggaagattgtgttggccttcgtagcct |
294 |
Q |
| |
|
| | ||||||||||| |||||| |||||||||| || |||| | |||||| | |||| ||||| ||| |||||||||||||| |||| |||| ||||| |
|
|
| T |
5074141 |
tcacagattgtccaaggttgtcagaggtttctcatagtattgaacatctcaataaaattcttctgataaatttggaagattgtattggtcttcagagcct |
5074042 |
T |
|
| Q |
295 |
tccaggaagcatctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttggaaca |
384 |
Q |
| |
|
|||| |||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||| |
|
|
| T |
5074041 |
tccaagaagtatctataagttgaaatctctaaaaactctcattctttccgggtgttcaatgattgacaagttggaagaggacttagaaca |
5073952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 80 - 388
Target Start/End: Complemental strand, 5182275 - 5181967
Alignment:
| Q |
80 |
acatgtctgttcttgcagaggatggaaaaactgaaaattctaaatcttagtcattctcattgtctgatacacaccccagacttttcatacatgcctaatc |
179 |
Q |
| |
|
|||| |||||||||||||||| |||| || ||||||||||| ||||||||||||||||||| |||| | | || |||||||||||| || ||||||| | |
|
|
| T |
5182275 |
acatttctgttcttgcagaggctggagaagctgaaaattctcaatcttagtcattctcattttctgtcaaagactccagacttttcaaacttgcctaacc |
5182176 |
T |
|
| Q |
180 |
ttgagaagctggtacttaaagattgtccaatgttgtctgaggtttctcctaccattggagatctcactgaaatacttctaatagatttggaagattgtgt |
279 |
Q |
| |
|
|||| || | ||||| | ||||||||| | ||||||||| ||||| | | ||||||||||||| | |||||||| | ||| ||||||||||||| | |
|
|
| T |
5182175 |
ttgaacagttagtactcacagattgtccgaagttgtctgaagtttcccaaagtattggagatctcaataaaatacttttgataaatttggaagattgcat |
5182076 |
T |
|
| Q |
280 |
tggccttcgtagccttccaggaagcatctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttg |
379 |
Q |
| |
|
| |||||| ||||||||| ||||||||||||| |||||||| | || |||||||||||||||||||||| ||||||| |||||||||||||||| ||| |
|
|
| T |
5182075 |
tagccttcaaagccttccaagaagcatctataatttgaaatcattaaacactctcattctttctgggtgtttaatgattgacaagttggaagaggatttg |
5181976 |
T |
|
| Q |
380 |
gaacaaatg |
388 |
Q |
| |
|
||||||||| |
|
|
| T |
5181975 |
gaacaaatg |
5181967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 87 - 384
Target Start/End: Complemental strand, 5284730 - 5284433
Alignment:
| Q |
87 |
tgttcttgcagaggatggaaaaactgaaaattctaaatcttagtcattctcattgtctgatacacaccccagacttttcatacatgcctaatcttgagaa |
186 |
Q |
| |
|
||||||||||||||||||| || ||||||||||| |||||||||||||| |||| ||| | || | ||| |||||||| |||||||||||||||| || |
|
|
| T |
5284730 |
tgttcttgcagaggatggagaagctgaaaattctcaatcttagtcattcccattatctcacacgaagccctgacttttcgaacatgcctaatcttgaaaa |
5284631 |
T |
|
| Q |
187 |
gctggtacttaaagattgtccaatgttgtctgaggtttctcctaccattggagatctcactgaaatacttctaatagatttggaagattgtgttggcctt |
286 |
Q |
| |
|
||| || || ||||||||||||| | | ||||||||||| |||| ||||||| |||||| | |||| | | ||| |||| |||| |||| || || | |
|
|
| T |
5284630 |
gctagtgctcaaagattgtccaaggctatctgaggtttcacctagcattggaaatctcaataaaattgctttgataaattttgaaggttgtattagctta |
5284531 |
T |
|
| Q |
287 |
cgtagccttccaggaagcatctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttggaaca |
384 |
Q |
| |
|
||||||| ||| ||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||| ||||||||||||||||||| ||||| |
|
|
| T |
5284530 |
tgtagcctcccacgaagcatctataagttgaaatctctaaaaactttcattctttttgggtgttcaatgattgacaagttggaagaggacttagaaca |
5284433 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 87 - 388
Target Start/End: Original strand, 5344601 - 5344902
Alignment:
| Q |
87 |
tgttcttgcagaggatggaaaaactgaaaattctaaatcttagtcattctcattgtctgatacacaccccagacttttcatacatgcctaatcttgagaa |
186 |
Q |
| |
|
||||||| |||| |||||| || ||||||||||| ||||||||||||||||||| |||||||| ||||| |||||||| ||| | ||||||||||| || |
|
|
| T |
5344601 |
tgttcttacagatgatggagaagctgaaaattctcaatcttagtcattctcattacctgatacaaaccccggacttttcttacttacctaatcttgaaaa |
5344700 |
T |
|
| Q |
187 |
gctggtacttaaagattgtccaatgttgtctgaggtttctcctaccattggagatctcactgaaatacttctaatagatttggaagattgtgttggcctt |
286 |
Q |
| |
|
| | ||||| |||||||||| |||| |||| |||||| || |||||||||||||| |||| ||||| || |||||||||| ||| || |||| |
|
|
| T |
5344701 |
gttagtactcgtggattgtccaagtttgtgtgagatttctcatagcattggagatctcaagaaaattcttctcattaatttggaagactgtattagccta |
5344800 |
T |
|
| Q |
287 |
cgtagccttccaggaagcatctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttggaacaaa |
386 |
Q |
| |
|
||||||| ||| ||||||||||||||||||| ||||| ||||||||||||||||| || |||| || |||| ||||||||||||||||||| ||||||| |
|
|
| T |
5344801 |
tgtagcctgccaagaagcatctataagttgaattctctaaaaactctcattctttcgggttgtttaaagattgacaagttggaagaggacttagaacaaa |
5344900 |
T |
|
| Q |
387 |
tg |
388 |
Q |
| |
|
|| |
|
|
| T |
5344901 |
tg |
5344902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 87 - 384
Target Start/End: Original strand, 5433775 - 5434072
Alignment:
| Q |
87 |
tgttcttgcagaggatggaaaaactgaaaattctaaatcttagtcattctcattgtctgatacacaccccagacttttcatacatgcctaatcttgagaa |
186 |
Q |
| |
|
||||||||||||| ||||| || ||||||||||| || |||||||||| ||||| ||||| ||| || |||||||||||| | ||||||||||||| || |
|
|
| T |
5433775 |
tgttcttgcagagaatggagaagctgaaaattcttaaccttagtcattgtcattatctgacacaaacaccagacttttcaaatttgcctaatcttgaaaa |
5433874 |
T |
|
| Q |
187 |
gctggtacttaaagattgtccaatgttgtctgaggtttctcctaccattggagatctcactgaaatacttctaatagatttggaagattgtgttggcctt |
286 |
Q |
| |
|
| | ||||| | ||||||||||| | |||||| ||||||||| |||||| |||||| |||||| ||||| ||| |||||||||||||| ||||||| |
|
|
| T |
5433875 |
gttagtactcacagattgtccaagtctttctgagatttctcctagcattggccatctcaatgaaattcttctgataaatttggaagattgtattggccta |
5433974 |
T |
|
| Q |
287 |
cgtagccttccaggaagcatctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttggaaca |
384 |
Q |
| |
|
||| ||| ||| ||||||| ||||||||||||||| ||||||||||||| ||| |||| |||| || |||| |||| |||||||| ||||||||||| |
|
|
| T |
5433975 |
tgtaacctcccaagaagcatatataagttgaaatctttgaaaactctcatccttactggctgtttaaagattgacaatttggaagatgacttggaaca |
5434072 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 87 - 384
Target Start/End: Complemental strand, 5257675 - 5257378
Alignment:
| Q |
87 |
tgttcttgcagaggatggaaaaactgaaaattctaaatcttagtcattctcattgtctgatacacaccccagacttttcatacatgcctaatcttgagaa |
186 |
Q |
| |
|
||||||||||||||||||| || ||||||||||| |||||||||||||| | |||||| | | | ||| |||||||| |||||||||||||||| || |
|
|
| T |
5257675 |
tgttcttgcagaggatggagaagctgaaaattctcaatcttagtcattcccgttgtctcacaagaagccctgacttttccaacatgcctaatcttgaaaa |
5257576 |
T |
|
| Q |
187 |
gctggtacttaaagattgtccaatgttgtctgaggtttctcctaccattggagatctcactgaaatacttctaatagatttggaagattgtgttggcctt |
286 |
Q |
| |
|
| | ||||| ||||||||||||||| | ||| ||||||| | | ||||||| |||||| |||| || | ||| |||||||||||||| || || | |
|
|
| T |
5257575 |
gttagtactcaaagattgtccaatgctatctagggtttcttcaagcattggaaatctcaagaaaattgttttgataaatttggaagattgtattagctta |
5257476 |
T |
|
| Q |
287 |
cgtagccttccaggaagcatctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttggaaca |
384 |
Q |
| |
|
| || ||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||| |
|
|
| T |
5257475 |
tgcgaactcccaagaagcatctataagttgaaatctctaaaaactttcattctttctgggtgttcaatgattgacaagttggaagaggacttagaaca |
5257378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 87 - 378
Target Start/End: Original strand, 5446897 - 5447188
Alignment:
| Q |
87 |
tgttcttgcagaggatggaaaaactgaaaattctaaatcttagtcattctcattgtctgatacacaccccagacttttcatacatgcctaatcttgagaa |
186 |
Q |
| |
|
||||||||||||||||||| || || |||||||| |||||||| ||||| || | ||| | ||| | ||| ||||||||| ||| |||||||||| | || |
|
|
| T |
5446897 |
tgttcttgcagaggatggagaagctaaaaattctcaatcttagccattcgcactatctcacacaaagccctgacttttcaaacacgcctaatcttcaaaa |
5446996 |
T |
|
| Q |
187 |
gctggtacttaaagattgtccaatgttgtctgaggtttctcctaccattggagatctcactgaaatacttctaatagatttggaagattgtgttggcctt |
286 |
Q |
| |
|
|| ||||| |||||||| ||| |||||||||||||||| |||| ||| || |||||| | |||| ||||| ||| | |||||||| || || |||| |
|
|
| T |
5446997 |
actagtactcaaagattgcccactgttgtctgaggtttcacctagcatcagacatctcaataaaattcttctgataaacttggaagactgcattagccta |
5447096 |
T |
|
| Q |
287 |
cgtagccttccaggaagcatctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggactt |
378 |
Q |
| |
|
||||||| ||| |||||||||||||||||||||| ||||||||||| |||||||||| |||| || |||| ||||| ||||||||||||| |
|
|
| T |
5447097 |
tgtagcctcccaaaaagcatctataagttgaaatctttgaaaactctcgttctttctggttgtttaaagattgacaaggtggaagaggactt |
5447188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 87 - 384
Target Start/End: Original strand, 5396690 - 5396987
Alignment:
| Q |
87 |
tgttcttgcagaggatggaaaaactgaaaattctaaatcttagtcattctcattgtctgatacacaccccagacttttcatacatgcctaatcttgagaa |
186 |
Q |
| |
|
|||||||||||||| |||| || ||||||||||| ||||||||||||||||||| | ||| ||| ||||||||||||||| |||||||||||||||| | |
|
|
| T |
5396690 |
tgttcttgcagaggctggagaagctgaaaattctcaatcttagtcattctcattatttgacacagaccccagacttttcaaacatgcctaatcttgaaca |
5396789 |
T |
|
| Q |
187 |
gctggtacttaaagattgtccaatgttgtctgaggtttctcctaccattggagatctcactgaaatacttctaatagatttggaagattgtgttggcctt |
286 |
Q |
| |
|
|| ||| | | |||||||||| |||||| || ||||| | || ||||||||||| | |||||||||||||| ||||||| ||||| || ||| |
|
|
| T |
5396790 |
actagtagtcactgattgtccaaagttgtcagaagtttcccataatattggagatctgaaaaaaatacttctaataaatttggagaattgtattaagctt |
5396889 |
T |
|
| Q |
287 |
cgtagccttccaggaagcatctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttggaaca |
384 |
Q |
| |
|
| ||||||||| |||| || |||||||||||||| || ||||||| ||||||||||||||| | ||||| |||| |||||||| || |||||||| |
|
|
| T |
5396890 |
caaagccttccaagaagtatttataagttgaaatcactacaaactcttcttctttctgggtgtttactgattgacaaattggaagaagatttggaaca |
5396987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 87 - 320
Target Start/End: Complemental strand, 5147237 - 5147004
Alignment:
| Q |
87 |
tgttcttgcagaggatggaaaaactgaaaattctaaatcttagtcattctcattgtctgatacacaccccagacttttcatacatgcctaatcttgagaa |
186 |
Q |
| |
|
||||||||||||||||||| || || |||||||| || |||||||| ||||||| | ||| ||| |||||| |||||| | || ||||||||||||| | |
|
|
| T |
5147237 |
tgttcttgcagaggatggagaagctaaaaattctcaagcttagtcactctcattatttgacacagaccccaaactttttaaacttgcctaatcttgaaca |
5147138 |
T |
|
| Q |
187 |
gctggtacttaaagattgtccaatgttgtctgaggtttctcctaccattggagatctcactgaaatacttctaatagatttggaagattgtgttggcctt |
286 |
Q |
| |
|
|| ||||| |||||||||||||||||||| ||||||| || |||||| |||||| | |||| ||||| ||| |||||||||||||| | ||||| |
|
|
| T |
5147137 |
actagtactctctgattgtccaatgttgtctgaagtttctcatagtattggatatctcaataaaattcttctgataaatttggaagattgtactagcctt |
5147038 |
T |
|
| Q |
287 |
cgtagccttccaggaagcatctataagttgaaat |
320 |
Q |
| |
|
|| || |||||| |||| || |||| |||||||| |
|
|
| T |
5147037 |
cgaagtcttccaagaagtatatataggttgaaat |
5147004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 327 - 388
Target Start/End: Original strand, 5281280 - 5281341
Alignment:
| Q |
327 |
aaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttggaacaaatg |
388 |
Q |
| |
|
||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
5281280 |
aaactctgattctttctgggtgttcaatgattaacaagttagaagaggacttggaacaaatg |
5281341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 327 - 388
Target Start/End: Original strand, 5179521 - 5179582
Alignment:
| Q |
327 |
aaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttggaacaaatg |
388 |
Q |
| |
|
||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||| ||||| |
|
|
| T |
5179521 |
aaactctgattctttctgggtgttcaaagattaacaagttggaagaggacttggaagaaatg |
5179582 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0294 (Bit Score: 191; Significance: 1e-103; HSPs: 1)
Name: scaffold0294
Description:
Target: scaffold0294; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 90 - 376
Target Start/End: Complemental strand, 9238 - 8952
Alignment:
| Q |
90 |
tcttgcagaggatggaaaaactgaaaattctaaatcttagtcattctcattgtctgatacacaccccagacttttcatacatgcctaatcttgagaagct |
189 |
Q |
| |
|
||||||||||| ||| || ||||||||||| ||||||||||||||||||| | |||| || ||||||||||||||||| ||||||||||||| ||||| |
|
|
| T |
9238 |
tcttgcagaggctggcgaagctgaaaattctcaatcttagtcattctcattatttgatgcataccccagacttttcatatttgcctaatcttgaaaagct |
9139 |
T |
|
| Q |
190 |
ggtacttaaagattgtccaatgttgtctgaggtttctcctaccattggagatctcactgaaatacttctaatagatttggaagattgtgttggccttcgt |
289 |
Q |
| |
|
||||| |||||||||||||||||| | |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
9138 |
agtactcaaagattgtccaatgttgaccgaggtttctcataccattggagatctcggtgaaatacttctaatagatttggaagattgtgttagccttcgt |
9039 |
T |
|
| Q |
290 |
agccttccaggaagcatctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggac |
376 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
9038 |
agccttccaagaagcatctataagttgaaatctctgaaaactctcattctttctgggtgtataatgattgacaagttggaagaggac |
8952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 133; Significance: 5e-69; HSPs: 23)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 88 - 388
Target Start/End: Original strand, 4344387 - 4344687
Alignment:
| Q |
88 |
gttcttgcagaggatggaaaaactgaaaattctaaatcttagtcattctcattgtctgatacacaccccagacttttcatacatgcctaatcttgagaag |
187 |
Q |
| |
|
|||||||||||||||||| | ||||||||||| ||||| ||||||||||||||||||| ||| || || |||||||||||| ||||||||||||| ||| |
|
|
| T |
4344387 |
gttcttgcagaggatggatcagctgaaaattctcaatctcagtcattctcattgtctgacacagacgcctgacttttcatacttgcctaatcttgaaaag |
4344486 |
T |
|
| Q |
188 |
ctggtacttaaagattgtccaatgttgtctgaggtttctcctaccattggagatctcactgaaatacttctaatagatttggaagattgtgttggccttc |
287 |
Q |
| |
|
|| ||||| ||||||||||||| | |||||||| |||| | | |||||| |||||| |||| ||| | ||| ||||| || ||||| || ||||| |
|
|
| T |
4344487 |
ctagtactcaaagattgtccaaggctgtctgagatttcccaaagtattggacatctcaacaaaattcttttgataaatttgaaaaattgtattagccttt |
4344586 |
T |
|
| Q |
288 |
gtagccttccaggaagcatctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttggaacaaat |
387 |
Q |
| |
|
||| ||||||| ||| |||||||| ||||||||||||||||||||||||||| ||||| |||| ||||||| |||||||||||||||||||||||||||| |
|
|
| T |
4344587 |
gtaaccttccaagaaacatctatacgttgaaatctctgaaaactctcattctatctggatgtttaatgattgacaagttggaagaggacttggaacaaat |
4344686 |
T |
|
| Q |
388 |
g |
388 |
Q |
| |
|
| |
|
|
| T |
4344687 |
g |
4344687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 110 - 388
Target Start/End: Original strand, 4360840 - 4361118
Alignment:
| Q |
110 |
ctgaaaattctaaatcttagtcattctcattgtctgatacacaccccagacttttcatacatgcctaatcttgagaagctggtacttaaagattgtccaa |
209 |
Q |
| |
|
||||||||||| ||||||||||||||||| | ||||| ||| || || |||||||||||| ||||||||||||| ||||| ||||||||||||||||||| |
|
|
| T |
4360840 |
ctgaaaattctcaatcttagtcattctcaatatctgacacagacgcctgacttttcatacttgcctaatcttgaaaagctagtacttaaagattgtccaa |
4360939 |
T |
|
| Q |
210 |
tgttgtctgaggtttctcctaccattggagatctcactgaaatacttctaatagatttggaagattgtgttggccttcgtagccttccaggaagcatcta |
309 |
Q |
| |
|
| |||||||| |||| | | |||||| |||||| |||| ||| | ||| ||||| ||||||| || ||||| ||| ||||||| ||| |||||| |
|
|
| T |
4360940 |
ggctgtctgagatttcccaaagtattggacatctcaagaaaattcttttgataaatttgaaagattgcattagcctttgtaaccttccaagaaacatcta |
4361039 |
T |
|
| Q |
310 |
taagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttggaacaaatg |
388 |
Q |
| |
|
|| ||||||||||||||||||||||||||| ||||| |||||||||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
4361040 |
tacgttgaaatctctgaaaactctcattctatctggatgttcaatgattgacacgttggaagaggacttggaacaaatg |
4361118 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 85 - 388
Target Start/End: Complemental strand, 4124282 - 4123979
Alignment:
| Q |
85 |
tctgttcttgcagaggatggaaaaactgaaaattctaaatcttagtcattctcattgtctgatacacaccccagacttttcatacatgcctaatcttgag |
184 |
Q |
| |
|
||||||||||||||| ||||| | ||||||||||| ||||||||||||||||||| ||||| ||| ||||| |||||||||||| ||||||| ||||| |
|
|
| T |
4124282 |
tctgttcttgcagagaatggagcagctgaaaattctcaatcttagtcattctcattatctgacacagacccctgacttttcatacttgcctaaccttgaa |
4124183 |
T |
|
| Q |
185 |
aagctggtacttaaagattgtccaatgttgtctgaggtttctcctaccattggagatctcactgaaatacttctaatagatttggaagattgtgttggcc |
284 |
Q |
| |
|
||||||||||| ||||||||||||| | |||||||||| || | ||| |||||| |||| | || | ||| | ||| ||||| |||||||| | ||| |
|
|
| T |
4124182 |
aagctggtactcaaagattgtccaaggctgtctgaggtatcccatacaattggacatcttaagaaagttcttttgataaatttgaaagattgtactagcc |
4124083 |
T |
|
| Q |
285 |
ttcgtagccttccaggaagcatctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttggaaca |
384 |
Q |
| |
|
|| || ||||||| ||| ||| ||| ||||||||||||||||||||||||||| || || |||| ||||||| |||||||||||||||| |||||||| |
|
|
| T |
4124082 |
tttctaaccttccaagaaacatttattcgttgaaatctctgaaaactctcattctatcgggatgtttaatgattgacaagttggaagaggagttggaaca |
4123983 |
T |
|
| Q |
385 |
aatg |
388 |
Q |
| |
|
|||| |
|
|
| T |
4123982 |
aatg |
4123979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 92 - 388
Target Start/End: Complemental strand, 4320955 - 4320659
Alignment:
| Q |
92 |
ttgcagaggatggaaaaactgaaaattctaaatcttagtcattctcattgtctgatacacaccccagacttttcatacatgcctaatcttgagaagctgg |
191 |
Q |
| |
|
|||||||||||||| | ||||| |||||||||||||||||||||||| | ||| ||| ||||| |||||||||||| ||||||||||||| ||||| | |
|
|
| T |
4320955 |
ttgcagaggatggagcagctgaagattctaaatcttagtcattctcatcatttgacacagacccctgacttttcatacttgcctaatcttgaaaagctag |
4320856 |
T |
|
| Q |
192 |
tacttaaagattgtccaatgttgtctgaggtttctcctaccattggagatctcactgaaatacttctaatagatttggaagattgtgttggccttcgtag |
291 |
Q |
| |
|
| || ||||||| |||| | ||||| ||||||| | || ||||||| |||||| || | || | ||| ||||| |||||||| || ||||| |||| |
|
|
| T |
4320855 |
tgctcgaagattgcccaaggctgtctcaggtttcccatagcattggacatctcaaaaaagttgttttgataaatttgaaagattgtattagcctttgtag |
4320756 |
T |
|
| Q |
292 |
ccttccaggaagcatctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttggaacaaatg |
388 |
Q |
| |
|
||||||| ||| |||||||| ||||||| ||||||| ||||||||||| || || |||| ||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
4320755 |
ccttccaagaaacatctatacgttgaaaactctgaatactctcattctatcgggatgtttaatgattgacaagttggaagaggacttggaacaaatg |
4320659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 89 - 388
Target Start/End: Original strand, 4335087 - 4335386
Alignment:
| Q |
89 |
ttcttgcagaggatggaaaaactgaaaattctaaatcttagtcattctcattgtctgatacacaccccagacttttcatacatgcctaatcttgagaagc |
188 |
Q |
| |
|
||||||||||||||||| | |||||||||| ||||||||||||||||||| ||| | ||| ||||| || ||||||||| ||||||||||||| || | |
|
|
| T |
4335087 |
ttcttgcagaggatggagcagttgaaaattctcaatcttagtcattctcattatctaacacagacccctgatttttcatacttgcctaatcttgaaaacc |
4335186 |
T |
|
| Q |
189 |
tggtacttaaagattgtccaatgttgtctgaggtttctcctaccattggagatctcactgaaatacttctaatagatttggaagattgtgttggccttcg |
288 |
Q |
| |
|
| ||||| ||||||||||| | | |||||||||| || | ||| |||||| |||| | || | ||| | ||| ||||| ||||||| || ||||| | |
|
|
| T |
4335187 |
tagtactcaaagattgtccgaggctgtctgaggtatcccatacaattggacatcttaagaaagttcttttgataaatttgaaagattgcattagcctttg |
4335286 |
T |
|
| Q |
289 |
tagccttccaggaagcatctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttggaacaaatg |
388 |
Q |
| |
|
|| ||||||| ||| |||||||| |||||| |||||||||||||||||||| || || |||| || |||| ||||||||||||||||||||||||||||| |
|
|
| T |
4335287 |
taaccttccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggacttggaacaaatg |
4335386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 87 - 388
Target Start/End: Complemental strand, 4133764 - 4133465
Alignment:
| Q |
87 |
tgttcttgcagaggatggaaaaactgaaaattctaaatcttagtcattctcattgtctgatacacaccccagacttttcatacatgcctaatcttgagaa |
186 |
Q |
| |
|
|||||||||||||| |||| || || ||| |||| ||||||||||||||||||||||| |||| |||||||| |||||| ||||||||||||| || || |
|
|
| T |
4133764 |
tgttcttgcagaggctggagaatctaaaatttctcaatcttagtcattctcattgtctagtacagaccccagatttttcacacatgcctaatctagaaaa |
4133665 |
T |
|
| Q |
187 |
gctggtacttaaagattgtccaatgttgtctgaggtttctcctaccattggagatctcactgaaatacttctaatagatttggaagattgtgttggcctt |
286 |
Q |
| |
|
|| |||| ||||||||||||| | ||||||||||||| | ||||||||| ||||| | || | || | ||| ||||| |||| ||| | ||||| |
|
|
| T |
4133664 |
actaatactcaaagattgtccaaggctgtctgaggtttcccataccattggtcatctccataaagttctcattataaatttgaaagactgtactagcctt |
4133565 |
T |
|
| Q |
287 |
cgtagccttccaggaagcatctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttggaacaaa |
386 |
Q |
| |
|
|||| ||||||| ||| ||||||| ||||||||||||||||||||| ||||||||||| |||| ||| ||| |||| ||||| ||||||||||||||| |
|
|
| T |
4133564 |
cgtaaccttccaagaaccatctattcgttgaaatctctgaaaactcttattctttctggctgtttaattattgacaaattgga--aggacttggaacaaa |
4133467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 384
Target Start/End: Complemental strand, 6621651 - 6621551
Alignment:
| Q |
284 |
cttcgtagccttccaggaagcatctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttggaac |
383 |
Q |
| |
|
||||||| |||||| ||||||||||||| || |||||||| ||||| | |||||||| || ||||| |||||| |||| ||||| ||||||||||||| |
|
|
| T |
6621651 |
cttcgtaaacttccaagaagcatctataaattaaaatctctagaaactttaattctttcaggatgttccatgattgacaaattggaggaggacttggaac |
6621552 |
T |
|
| Q |
384 |
a |
384 |
Q |
| |
|
| |
|
|
| T |
6621551 |
a |
6621551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 209
Target Start/End: Original strand, 6650872 - 6650929
Alignment:
| Q |
152 |
accccagacttttcatacatgcctaatcttgagaagctggtacttaaagattgtccaa |
209 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| ||||| ||||| ||||| ||||||| |
|
|
| T |
6650872 |
accccagacttttcattcatgcctaatcttgaaaagctagtactcaaagactgtccaa |
6650929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 6752726 - 6752822
Alignment:
| Q |
113 |
aaaattctaaatcttagtcattctcattgtctgatacacaccccagacttttcatacatgcctaatcttgagaagctggtacttaaagattgtccaa |
209 |
Q |
| |
|
|||||||| ||||||||||||||||| | ||| | || |||||||||||||| |||||||||||||| ||||| ||||| ||||| ||||||| |
|
|
| T |
6752726 |
aaaattcttaatcttagtcattctcaggatttgaccgaaactccagacttttcatatatgcctaatcttgaaaagcttgtactcaaagactgtccaa |
6752822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 293 - 384
Target Start/End: Original strand, 6815416 - 6815507
Alignment:
| Q |
293 |
cttccaggaagcatctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttggaaca |
384 |
Q |
| |
|
|||||| |||||| |||||| || |||||||| ||||| | ||||||||||| ||||| |||||| | || ||||| |||||||||||||| |
|
|
| T |
6815416 |
cttccaagaagcaactataaattaaaatctctagaaactttgattctttctggatgttccatgattgaaaaattggaggaggacttggaaca |
6815507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 6752916 - 6752997
Alignment:
| Q |
303 |
gcatctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttggaaca |
384 |
Q |
| |
|
|||| ||||| || |||||||| ||||| | ||||||||||| ||||| |||||| |||| ||||| |||||||||||||| |
|
|
| T |
6752916 |
gcatatataaattaaaatctctagaaactttgattctttctggatgttccatgattgacaaattggaggaggacttggaaca |
6752997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 384
Target Start/End: Complemental strand, 6498654 - 6498570
Alignment:
| Q |
300 |
gaagcatctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttggaaca |
384 |
Q |
| |
|
||||||||||||| || |||||||| ||||| | ||||||||||| ||||| | |||| |||| ||||| |||||| ||||||| |
|
|
| T |
6498654 |
gaagcatctataaattaaaatctctagaaactttgattctttctggatgttccaagattgacaaattggaggaggacgtggaaca |
6498570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 209
Target Start/End: Complemental strand, 6498841 - 6498745
Alignment:
| Q |
113 |
aaaattctaaatcttagtcattctcattgtctgatacacaccccagacttttcatacatgcctaatcttgagaagctggtacttaaagattgtccaa |
209 |
Q |
| |
|
|||||||| ||||||||||||||||| | |||| | |||||||||||| | ||| |||||||| |||| ||||| ||||| ||||| ||||||| |
|
|
| T |
6498841 |
aaaattcttaatcttagtcattctcagaatttgattgaaaccccagactttacgtacttgcctaatattgaaaagctagtactcaaagactgtccaa |
6498745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 384
Target Start/End: Original strand, 6651020 - 6651104
Alignment:
| Q |
300 |
gaagcatctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttggaaca |
384 |
Q |
| |
|
||||||| ||||| || |||||||| ||||| | ||||||||||| ||||| | |||| |||| ||||| |||||||||||||| |
|
|
| T |
6651020 |
gaagcatatataaattaaaatctctagaaactttgattctttctggatgttccaagattgacaaattggaggaggacttggaaca |
6651104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 6772870 - 6772966
Alignment:
| Q |
113 |
aaaattctaaatcttagtcattctcattgtctgatacacaccccagacttttcatacatgcctaatcttgagaagctggtacttaaagattgtccaa |
209 |
Q |
| |
|
|||||||| |||||||||||||| ||| | ||| | |||||||||||||||||| |||| |||||||| ||||| ||||| || ||||||||| |
|
|
| T |
6772870 |
aaaattcttaatcttagtcattcccatgatttgaccgaaaccccagacttttcatacttgccgaatcttgaaaagctagtactcaagaattgtccaa |
6772966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 384
Target Start/End: Original strand, 6796592 - 6796824
Alignment:
| Q |
152 |
accccagacttttcatacatgcctaatcttgagaagctggtacttaaagattgtccaatgttgtctgaggtttctcctaccattggagatctcactgaaa |
251 |
Q |
| |
|
|||||||||||| ||||| | || |||||||| ||||| ||||| ||| ||||||||| |||||| ||| || | || ||||||| ||| | ||| |
|
|
| T |
6796592 |
accccagactttacatacttaccaaatcttgaaaagctagtactaaaaaattgtccaagtttgtctacggtctcccatagcattggatctctacataaaa |
6796691 |
T |
|
| Q |
252 |
tacttctaatagatttggaagattgtgttggccttcgtagccttccaggaagcatctataagttgaaatctctgaaaactctcattctttctgggtgttc |
351 |
Q |
| |
|
| ||||| ||| ||||| ||| || | || ||||| | |||||| |||||||||||| || |||||||| ||||| | ||||||||||| ||| | |
|
|
| T |
6796692 |
ttcttctcataaatttgacagactgcataggtcttcggaaacttccaagaagcatctatacattaaaatctctagaaactttgattctttctggatgtac |
6796791 |
T |
|
| Q |
352 |
aatgattcacaagttggaagaggacttggaaca |
384 |
Q |
| |
|
|||||| | || ||||| |||||||||||||| |
|
|
| T |
6796792 |
catgattgaaaaattggaggaggacttggaaca |
6796824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 301 - 384
Target Start/End: Complemental strand, 6545575 - 6545492
Alignment:
| Q |
301 |
aagcatctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttggaaca |
384 |
Q |
| |
|
|||||||||||| || |||||||| ||||| | |||||||| || ||||| | |||| |||| ||||| |||||||||||||| |
|
|
| T |
6545575 |
aagcatctataaattaaaatctctagaaactttgattctttcgggatgttccaagattaacaaattggaggaggacttggaaca |
6545492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 218
Target Start/End: Complemental strand, 6532508 - 6532442
Alignment:
| Q |
152 |
accccagacttttcatacatgcctaatcttgagaagctggtacttaaagattgtccaatgttgtctg |
218 |
Q |
| |
|
|||||| |||||||||| |||||||||||||| ||| | ||||| ||||| ||||||| ||||||| |
|
|
| T |
6532508 |
accccaaacttttcatatatgcctaatcttgaaaagttagtactcaaagactgtccaagtttgtctg |
6532442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 209
Target Start/End: Complemental strand, 6545724 - 6545667
Alignment:
| Q |
152 |
accccagacttttcatacatgcctaatcttgagaagctggtacttaaagattgtccaa |
209 |
Q |
| |
|
||||||||||||||||| |||||||||||||| ||| | ||||| |||| ||||||| |
|
|
| T |
6545724 |
accccagacttttcatatatgcctaatcttgaaaagatagtactcaaaggctgtccaa |
6545667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 6621783 - 6621718
Alignment:
| Q |
152 |
accccagacttttcatacatgcctaatcttgagaagctggtacttaaagattgtccaatgttgtct |
217 |
Q |
| |
|
|||||||| |||||||||||||||||||| || ||||| || || ||||| ||||||| |||||| |
|
|
| T |
6621783 |
accccagatttttcatacatgcctaatctcgaaaagctagtgctcaaagactgtccaagtttgtct |
6621718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 209
Target Start/End: Original strand, 6675508 - 6675565
Alignment:
| Q |
152 |
accccagacttttcatacatgcctaatcttgagaagctggtacttaaagattgtccaa |
209 |
Q |
| |
|
|||||||||||||||||| |||| ||| |||| |||||||| || ||||| ||||||| |
|
|
| T |
6675508 |
accccagacttttcatacttgcccaatattgaaaagctggtgctcaaagactgtccaa |
6675565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 209
Target Start/End: Original strand, 6815275 - 6815332
Alignment:
| Q |
152 |
accccagacttttcatacatgcctaatcttgagaagctggtacttaaagattgtccaa |
209 |
Q |
| |
|
|||||||||||| ||||| |||| |||||||| ||||| ||||| ||| ||||||||| |
|
|
| T |
6815275 |
accccagactttacatacttgccaaatcttgaaaagctagtactcaaaaattgtccaa |
6815332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 380
Target Start/End: Original strand, 6837227 - 6837307
Alignment:
| Q |
300 |
gaagcatctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttgg |
380 |
Q |
| |
|
|||||||||||| || |||||||| ||||| | ||||||||||| ||||| |||||| |||| ||||| ||||| |||| |
|
|
| T |
6837227 |
gaagcatctatacattaaaatctctacaaactttgattctttctggatgttccatgattgacaaattggaggaggatttgg |
6837307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 116; Significance: 6e-59; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 26 - 384
Target Start/End: Complemental strand, 36214231 - 36213873
Alignment:
| Q |
26 |
cattgtaattgtttccatttattttttgatgagtcttccttaagtttacgtt-tgacatgtctgttcttgcagaggatggaaaaactgaaaattctaaat |
124 |
Q |
| |
|
|||||||||| ||||||||||||||| ||| ||||| ||||||| | || | |||| |||||||||||||||| ||||||| ||||||||||| ||| |
|
|
| T |
36214231 |
cattgtaatttcttccatttatttttt-atgtttcttctctaagttttctttataacatttctgttcttgcagaggctggaaaagctgaaaattctcaat |
36214133 |
T |
|
| Q |
125 |
cttagtcattctcattgtctgatacacaccccagacttttcatacatgcctaatcttgagaagctggtacttaaagattgtccaatgttgtctgaggttt |
224 |
Q |
| |
|
|||||||||||||||| ||||| | | || ||||| |||||| |||||||||| ||||| || || ||||| | ||||||||||| ||||||||||||| |
|
|
| T |
36214132 |
cttagtcattctcattatctgacaaagactccagatttttcaaacatgcctaaccttgaaaaactagtactcacagattgtccaagattgtctgaggttt |
36214033 |
T |
|
| Q |
225 |
ctcctaccattggagatctcactgaaatacttctaatagatttggaagattgtgttggccttcgtagccttccaggaagcatctataagttgaaatctct |
324 |
Q |
| |
|
| | | |||||| |||||| | || | ||||||||| |||||||||||||| || |||||| |||||||| | | ||||||||||| |||| || |
|
|
| T |
36214032 |
cccacagtattggacatctcaataaagttcttctaataaatttggaagattgtattagccttcaaagccttcctaaaggtatctataagttaaaattact |
36213933 |
T |
|
| Q |
325 |
gaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttggaaca |
384 |
Q |
| |
|
|||||||||||||||||||| ||||||| |||| |||| |||||||||||| ||||||| |
|
|
| T |
36213932 |
taaaactctcattctttctggatgttcaaagattgacaaattggaagaggacatggaaca |
36213873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 110 - 388
Target Start/End: Complemental strand, 34724904 - 34724626
Alignment:
| Q |
110 |
ctgaaaattctaaatcttagtcattctcattgtctgatacacaccccagacttttcatacatgcctaatcttgagaagctggtacttaaagattgtccaa |
209 |
Q |
| |
|
|||||| |||| |||||||||||||||||| ||| ||| || ||||||||||||||| |||| |||||||| ||| | |||| ||||||||||||| |
|
|
| T |
34724904 |
ctgaaatttcttaatcttagtcattctcataacttgaaacaaacaccagacttttcatacttgccaaatcttgaaaagttaatactcaaagattgtccaa |
34724805 |
T |
|
| Q |
210 |
tgttgtctgaggtttctcctaccattggagatctcactgaaatacttctaatagatttggaagattgtgttggccttcgtagccttccaggaagcatcta |
309 |
Q |
| |
|
||||| |||||||||| || ||| |||||| |||| || | ||| ||||| |||| ||| |||||| || |||||| |||||||||| |
|
|
| T |
34724804 |
atttgtcctcagtttctcctaatataggaaatctcaagaaaattctattgataaatttgaaagactgtacaggcctttgtgagcttccaagaagcatcta |
34724705 |
T |
|
| Q |
310 |
taagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttggaacaaatg |
388 |
Q |
| |
|
||| ||||| || | |||||||||||| | ||||| ||| ||| ||| ||||||||||||||||| | ||||||||| |
|
|
| T |
34724704 |
taaattgaagtcagtaaaaactctcattgtgtctggatgtacaaaaattgacaagttggaagaggacatagaacaaatg |
34724626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 110; Significance: 2e-55; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 87 - 388
Target Start/End: Complemental strand, 47987193 - 47986892
Alignment:
| Q |
87 |
tgttcttgcagaggatggaaaaactgaaaattctaaatcttagtcattctcattgtctgatacacaccccagacttttcatacatgcctaatcttgagaa |
186 |
Q |
| |
|
|||||||||||| ||||||||| || |||||||| ||||||||||||||||||| ||| | || | || ||||||||| ||||||||||||| || || |
|
|
| T |
47987193 |
tgttcttgcagaagatggaaaagctaaaaattctcaatcttagtcattctcattatctcacacgaagccttgacttttcaaacatgcctaatctcgaaaa |
47987094 |
T |
|
| Q |
187 |
gctggtacttaaagattgtccaatgttgtctgaggtttctcctaccattggagatctcactgaaatacttctaatagatttggaagattgtgttggcctt |
286 |
Q |
| |
|
||| ||||| |||||||| |||||||| |||||| ||||||||| ||||||| ||||| |||| ||||| ||| |||||||||| ||| || |||| |
|
|
| T |
47987093 |
gctagtactcaaagattgcccaatgttatctgagatttctcctagcattggacatctcgacaaaattcttctgataaatttggaagactgtattagccta |
47986994 |
T |
|
| Q |
287 |
cgtagccttccaggaagcatctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttggaacaaa |
386 |
Q |
| |
|
||||||| ||| |||||| || || || |||||||| |||||||||||||||||||| |||| || |||| ||||||||||||||||| ||||| ||| |
|
|
| T |
47986993 |
tgtagcctcccaagaagcacatacaaattaaaatctctaaaaactctcattctttctggctgtttaaagattaacaagttggaagaggacatggaataaa |
47986894 |
T |
|
| Q |
387 |
tg |
388 |
Q |
| |
|
|| |
|
|
| T |
47986893 |
tg |
47986892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 87 - 388
Target Start/End: Complemental strand, 47996480 - 47996179
Alignment:
| Q |
87 |
tgttcttgcagaggatggaaaaactgaaaattctaaatcttagtcattctcattgtctgatacacaccccagacttttcatacatgcctaatcttgagaa |
186 |
Q |
| |
|
|||||||||||| ||||||||| || |||||||| ||||||||||||||||||| ||| | || | || ||||||||| ||||||||||||| || || |
|
|
| T |
47996480 |
tgttcttgcagaagatggaaaagctaaaaattctcaatcttagtcattctcattatctcacacgaagccttgacttttcaaacatgcctaatctcgaaaa |
47996381 |
T |
|
| Q |
187 |
gctggtacttaaagattgtccaatgttgtctgaggtttctcctaccattggagatctcactgaaatacttctaatagatttggaagattgtgttggcctt |
286 |
Q |
| |
|
||| ||||| |||||||| |||||||| |||||| ||||||||| ||||||| ||||| |||| ||||| ||| |||||||||| ||| || |||| |
|
|
| T |
47996380 |
gctagtactcaaagattgcccaatgttatctgagatttctcctagcattggacatctcgacaaaattcttctgataaatttggaagactgtattagccta |
47996281 |
T |
|
| Q |
287 |
cgtagccttccaggaagcatctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttggaacaaa |
386 |
Q |
| |
|
||||||| ||| |||||| || || || |||||||| |||||||||||||||||||| |||| || |||| ||||||||||||||||| ||||| ||| |
|
|
| T |
47996280 |
tgtagcctcccaagaagcacatacaaattaaaatctctaaaaactctcattctttctggctgtttaaagattaacaagttggaagaggacatggaataaa |
47996181 |
T |
|
| Q |
387 |
tg |
388 |
Q |
| |
|
|| |
|
|
| T |
47996180 |
tg |
47996179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 87 - 388
Target Start/End: Complemental strand, 48005767 - 48005466
Alignment:
| Q |
87 |
tgttcttgcagaggatggaaaaactgaaaattctaaatcttagtcattctcattgtctgatacacaccccagacttttcatacatgcctaatcttgagaa |
186 |
Q |
| |
|
|||||||||||| ||||||||| || |||||||| ||||||||||||||||||| ||| | || | || ||||||||| ||||||||||||| || || |
|
|
| T |
48005767 |
tgttcttgcagaagatggaaaagctaaaaattctcaatcttagtcattctcattatctcacacgaagccttgacttttcaaacatgcctaatctcgaaaa |
48005668 |
T |
|
| Q |
187 |
gctggtacttaaagattgtccaatgttgtctgaggtttctcctaccattggagatctcactgaaatacttctaatagatttggaagattgtgttggcctt |
286 |
Q |
| |
|
||| ||||| |||||||| |||||||| |||||| ||||||||| ||||||| ||||| |||| ||||| ||| |||||||||| ||| || |||| |
|
|
| T |
48005667 |
gctagtactcaaagattgcccaatgttatctgagatttctcctagcattggacatctcgacaaaattcttctgataaatttggaagactgtattagccta |
48005568 |
T |
|
| Q |
287 |
cgtagccttccaggaagcatctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttggaacaaa |
386 |
Q |
| |
|
||||||| ||| |||||| || || || |||||||| |||||||||||||||||||| |||| || |||| ||||||||||||||||| ||||| ||| |
|
|
| T |
48005567 |
tgtagcctcccaagaagcacatacaaattaaaatctctaaaaactctcattctttctggctgtttaaagattaacaagttggaagaggacatggaataaa |
48005468 |
T |
|
| Q |
387 |
tg |
388 |
Q |
| |
|
|| |
|
|
| T |
48005467 |
tg |
48005466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 87 - 388
Target Start/End: Complemental strand, 48015052 - 48014751
Alignment:
| Q |
87 |
tgttcttgcagaggatggaaaaactgaaaattctaaatcttagtcattctcattgtctgatacacaccccagacttttcatacatgcctaatcttgagaa |
186 |
Q |
| |
|
|||||||||||| ||||||||| || |||||||| ||||||||||||||||||| ||| | || | || ||||||||| ||||||||||||| || || |
|
|
| T |
48015052 |
tgttcttgcagaagatggaaaagctaaaaattctcaatcttagtcattctcattatctcacacgaagccttgacttttcaaacatgcctaatctcgaaaa |
48014953 |
T |
|
| Q |
187 |
gctggtacttaaagattgtccaatgttgtctgaggtttctcctaccattggagatctcactgaaatacttctaatagatttggaagattgtgttggcctt |
286 |
Q |
| |
|
||| ||||| |||||||| |||||||| |||||| ||||||||| ||||||| ||||| |||| ||||| ||| |||||||||| ||| || |||| |
|
|
| T |
48014952 |
gctagtactcaaagattgcccaatgttatctgagatttctcctagcattggacatctcgacaaaattcttctgataaatttggaagactgtattagccta |
48014853 |
T |
|
| Q |
287 |
cgtagccttccaggaagcatctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttggaacaaa |
386 |
Q |
| |
|
||||||| ||| |||||| || || || |||||||| |||||||||||||||||||| |||| || |||| ||||||||||||||||| ||||| ||| |
|
|
| T |
48014852 |
tgtagcctcccaagaagcacatacaaattaaaatctctaaaaactctcattctttctggctgtttaaagattaacaagttggaagaggacatggaataaa |
48014753 |
T |
|
| Q |
387 |
tg |
388 |
Q |
| |
|
|| |
|
|
| T |
48014752 |
tg |
48014751 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 372
Target Start/End: Complemental strand, 32411314 - 32411256
Alignment:
| Q |
314 |
ttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaaga |
372 |
Q |
| |
|
||||||||| ||||||||||||| |||||||| ||||||| |||| | || |||||||| |
|
|
| T |
32411314 |
ttgaaatctttgaaaactctcatcctttctggttgttcaaagattgaaaacttggaaga |
32411256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 369
Target Start/End: Complemental strand, 6906049 - 6905985
Alignment:
| Q |
305 |
atctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttgga |
369 |
Q |
| |
|
|||||| || ||| |||| |||||||||||||||||| ||| ||||||| |||| |||| ||||| |
|
|
| T |
6906049 |
atctatcagctgatatctgtgaaaactctcattctttttggttgttcaaagattgacaaattgga |
6905985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 102; Significance: 1e-50; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 87 - 384
Target Start/End: Original strand, 8877349 - 8877646
Alignment:
| Q |
87 |
tgttcttgcagaggatggaaaaactgaaaattctaaatcttagtcattctcattgtctgatacacaccccagacttttcatacatgcctaatcttgagaa |
186 |
Q |
| |
|
||||||||||||||||||| || || |||||||| |||||||| || |||||| ||||| ||| || |||||||||| | || ||||||||||||| || |
|
|
| T |
8877349 |
tgttcttgcagaggatggagaagctaaaaattctcaatcttagccactctcatcatctgacacaaactccagactttttaaacttgcctaatcttgaaaa |
8877448 |
T |
|
| Q |
187 |
gctggtacttaaagattgtccaatgttgtctgaggtttctcctaccattggagatctcactgaaatacttctaatagatttggaagattgtgttggcctt |
286 |
Q |
| |
|
||| ||||| ||||||||||| | |||| ||| |||| | ||| || ||| ||| | | || | ||| | ||| |||||||||||||| || ||||| |
|
|
| T |
8877449 |
gctagtactcaaagattgtccgaggttgatagagatttcgcatactataggacttctgaataaagttcttttgataaatttggaagattgtattagcctt |
8877548 |
T |
|
| Q |
287 |
cgtagccttccaggaagcatctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttggaaca |
384 |
Q |
| |
|
|| ||||||||| |||| || || |||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||| |||||||| ||||| |
|
|
| T |
8877549 |
cggagccttccaagaagtatatacaagttgaaatctctaaaatctctcattctttctgggtgttcaatgattgacaagttggaggaggacttagaaca |
8877646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 305 - 372
Target Start/End: Original strand, 20812235 - 20812302
Alignment:
| Q |
305 |
atctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaaga |
372 |
Q |
| |
|
|||||||| |||| ||| |||||||||| ||||||||||| ||||||| |||| | ||||||||||| |
|
|
| T |
20812235 |
atctataaattgatatcggtgaaaactcttattctttctggttgttcaaagattgagaagttggaaga |
20812302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 254 - 388
Target Start/End: Complemental strand, 22584388 - 22584254
Alignment:
| Q |
254 |
cttctaatagatttggaagattgtgttggccttcgtagccttccaggaagcatctataagttgaaatctctgaaaactctcattctttctgggtgttcaa |
353 |
Q |
| |
|
||||||||| ||||| |||| ||| | ||||| ||||||| ||| ||| |||||| |||||||||||| |||||||||||||||||||||| |||| || |
|
|
| T |
22584388 |
cttctaataaatttgcaagactgtttaagcctttgtagcctcccaagaaacatctacaagttgaaatctttgaaaactctcattctttctggctgttaaa |
22584289 |
T |
|
| Q |
354 |
tgattcacaagttggaagaggacttggaacaaatg |
388 |
Q |
| |
|
|| | ||||||||||||||||||||||||||| |
|
|
| T |
22584288 |
aactttataagttggaagaggacttggaacaaatg |
22584254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 305 - 372
Target Start/End: Complemental strand, 14767190 - 14767123
Alignment:
| Q |
305 |
atctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaaga |
372 |
Q |
| |
|
|||||| | ||||||||| ||||||||||||| ||||| || ||||||| |||| |||| |||||||| |
|
|
| T |
14767190 |
atctatcaattgaaatctttgaaaactctcatcctttccggctgttcaaagattgacaaattggaaga |
14767123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0813 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0813
Description:
Target: scaffold0813; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 209
Target Start/End: Complemental strand, 5102 - 5045
Alignment:
| Q |
152 |
accccagacttttcatacatgcctaatcttgagaagctggtacttaaagattgtccaa |
209 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| ||||| ||||| ||||| ||||||| |
|
|
| T |
5102 |
accccagacttttcattcatgcctaatcttgaaaagctagtactcaaagactgtccaa |
5045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0813; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 384
Target Start/End: Complemental strand, 4954 - 4870
Alignment:
| Q |
300 |
gaagcatctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttggaaca |
384 |
Q |
| |
|
||||||| ||||| || |||||||| ||||| | ||||||||||| ||||| | |||| |||| ||||| |||||||||||||| |
|
|
| T |
4954 |
gaagcatatataaattaaaatctctagaaactttgattctttctggatgttccaagattgacaaattggaggaggacttggaaca |
4870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0286 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0286
Description:
Target: scaffold0286; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 209
Target Start/End: Original strand, 6464 - 6521
Alignment:
| Q |
152 |
accccagacttttcatacatgcctaatcttgagaagctggtacttaaagattgtccaa |
209 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| ||||| ||||| ||||| ||||||| |
|
|
| T |
6464 |
accccagacttttcattcatgcctaatcttgaaaagctagtactcaaagactgtccaa |
6521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0286; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 384
Target Start/End: Original strand, 6612 - 6696
Alignment:
| Q |
300 |
gaagcatctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttggaaca |
384 |
Q |
| |
|
||||||| ||||| || |||||||| ||||| | ||||||||||| ||||| | |||| |||| ||||| |||||||||||||| |
|
|
| T |
6612 |
gaagcatatataaattaaaatctctagaaactttgattctttctggatgttccaagattgacaaattggaggaggacttggaaca |
6696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0552 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0552
Description:
Target: scaffold0552; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 293 - 384
Target Start/End: Complemental strand, 8420 - 8329
Alignment:
| Q |
293 |
cttccaggaagcatctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttggaaca |
384 |
Q |
| |
|
|||||| |||||| |||||| || |||||||| ||||| | ||||||||||| ||||| |||||| | || ||||| |||||||||||||| |
|
|
| T |
8420 |
cttccaagaagcaactataaattaaaatctctagaaactttgattctttctggatgttccatgattgaaaaattggaggaggacttggaaca |
8329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0552; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 209
Target Start/End: Complemental strand, 8561 - 8504
Alignment:
| Q |
152 |
accccagacttttcatacatgcctaatcttgagaagctggtacttaaagattgtccaa |
209 |
Q |
| |
|
|||||||||||| ||||| |||| |||||||| ||||| ||||| ||| ||||||||| |
|
|
| T |
8561 |
accccagactttacatacttgccaaatcttgaaaagctagtactcaaaaattgtccaa |
8504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 34; Significance: 0.0000000006; HSPs: 7)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 315 - 372
Target Start/End: Complemental strand, 3286748 - 3286691
Alignment:
| Q |
315 |
tgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaaga |
372 |
Q |
| |
|
|||||||| |||| |||||||| |||||||| ||||||| |||| ||||||||||||| |
|
|
| T |
3286748 |
tgaaatctttgaacactctcatcctttctggttgttcaaagattgacaagttggaaga |
3286691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 372
Target Start/End: Original strand, 31175824 - 31175872
Alignment:
| Q |
324 |
tgaaaactctcattctttctgggtgttcaatgattcacaagttggaaga |
372 |
Q |
| |
|
|||||| ||||||||||||||| |||||||||||| |||| |||||||| |
|
|
| T |
31175824 |
tgaaaagtctcattctttctggttgttcaatgattgacaaattggaaga |
31175872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 305 - 372
Target Start/End: Complemental strand, 3398763 - 3398696
Alignment:
| Q |
305 |
atctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaaga |
372 |
Q |
| |
|
|||||| | |||||||| |||||||||||||| ||||||| ||||||| |||| |||| |||||||| |
|
|
| T |
3398763 |
atctatcaattgaaatcagtgaaaactctcattatttctggttgttcaaagattgacaaattggaaga |
3398696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 372
Target Start/End: Complemental strand, 3262860 - 3262802
Alignment:
| Q |
314 |
ttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaaga |
372 |
Q |
| |
|
||||||||| ||||||||||||| |||||||| || |||| |||| |||| |||||||| |
|
|
| T |
3262860 |
ttgaaatctttgaaaactctcatactttctggttgctcaaagattgacaaattggaaga |
3262802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 372
Target Start/End: Complemental strand, 7164889 - 7164828
Alignment:
| Q |
311 |
aagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaaga |
372 |
Q |
| |
|
||||||||||| ||||||||||||| |||||||| ||||||| |||| | |||||||||| |
|
|
| T |
7164889 |
aagttgaaatcattgaaaactctcatcctttctggttgttcaaagattgcctagttggaaga |
7164828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 324 - 372
Target Start/End: Original strand, 3375055 - 3375103
Alignment:
| Q |
324 |
tgaaaactctcattctttctgggtgttcaatgattcacaagttggaaga |
372 |
Q |
| |
|
|||||||||| || |||||||| ||||||| |||| ||||||||||||| |
|
|
| T |
3375055 |
tgaaaactcttatactttctggttgttcaaagattaacaagttggaaga |
3375103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 372
Target Start/End: Original strand, 13808670 - 13808730
Alignment:
| Q |
312 |
agttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaaga |
372 |
Q |
| |
|
|||||||||| |||||||||| || ||||||| ||||||| |||| ||||||||||||| |
|
|
| T |
13808670 |
agttgaaatcattgaaaactctaatcttttctggttgttcaaagattgacaagttggaaga |
13808730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0373 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0373
Description:
Target: scaffold0373; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 380
Target Start/End: Original strand, 9643 - 9723
Alignment:
| Q |
300 |
gaagcatctataagttgaaatctctgaaaactctcattctttctgggtgttcaatgattcacaagttggaagaggacttgg |
380 |
Q |
| |
|
|||||||||||| || |||||||| ||||| | ||||||||||| ||||| |||||| |||| ||||| ||||| |||| |
|
|
| T |
9643 |
gaagcatctatacattaaaatctctacaaactttgattctttctggatgttccatgattgacaaattggaggaggatttgg |
9723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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