View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12792_low_1 (Length: 698)

Name: NF12792_low_1
Description: NF12792
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12792_low_1
NF12792_low_1
[»] chr3 (86 HSPs)
chr3 (263-694)||(42198944-42199379)
chr3 (492-693)||(42211516-42211717)
chr3 (492-693)||(42223732-42223933)
chr3 (88-180)||(42199436-42199528)
chr3 (133-180)||(4322039-4322086)
chr3 (133-180)||(36732822-36732869)
chr3 (133-180)||(38232346-38232393)
chr3 (133-180)||(46724624-46724671)
chr3 (133-180)||(47005369-47005416)
chr3 (249-283)||(48924207-48924241)
chr3 (246-283)||(1721416-1721453)
chr3 (246-283)||(14772210-14772247)
chr3 (246-283)||(47336227-47336264)
chr3 (133-178)||(53113598-53113643)
chr3 (246-282)||(15979338-15979374)
chr3 (251-283)||(20644845-20644877)
chr3 (246-282)||(26089730-26089766)
chr3 (246-282)||(45313827-45313863)
chr3 (132-180)||(50009134-50009182)
chr3 (133-180)||(1721302-1721349)
chr3 (249-292)||(22008857-22008900)
chr3 (133-180)||(25609847-25609894)
chr3 (137-180)||(54767389-54767432)
chr3 (246-280)||(2486866-2486900)
chr3 (249-283)||(9262122-9262156)
chr3 (249-283)||(9603886-9603920)
chr3 (249-283)||(19844548-19844582)
chr3 (246-292)||(20611010-20611056)
chr3 (133-171)||(20644720-20644758)
chr3 (249-283)||(21553888-21553922)
chr3 (249-283)||(25615974-25616008)
chr3 (249-283)||(26799887-26799921)
chr3 (134-180)||(27681533-27681579)
chr3 (249-283)||(28552020-28552054)
chr3 (249-283)||(28552350-28552384)
chr3 (133-167)||(29490494-29490528)
chr3 (249-283)||(31480135-31480169)
chr3 (249-283)||(45002020-45002054)
chr3 (249-283)||(51550081-51550115)
chr3 (249-283)||(52342194-52342228)
chr3 (133-167)||(53113648-53113682)
chr3 (249-283)||(54608517-54608551)
chr3 (250-283)||(474043-474076)
chr3 (250-283)||(474376-474409)
chr3 (250-283)||(3417819-3417852)
chr3 (249-282)||(4035020-4035053)
chr3 (246-283)||(5345653-5345690)
chr3 (246-283)||(9597059-9597096)
chr3 (250-283)||(12740906-12740939)
chr3 (250-283)||(12741239-12741272)
chr3 (249-282)||(16123139-16123172)
chr3 (133-162)||(19297803-19297832)
chr3 (133-162)||(19297839-19297868)
chr3 (246-283)||(28452340-28452377)
chr3 (250-283)||(29490711-29490744)
chr3 (137-178)||(29678127-29678168)
chr3 (250-283)||(39132874-39132907)
chr3 (249-294)||(39288865-39288910)
chr3 (246-283)||(40277821-40277858)
chr3 (133-162)||(40278037-40278066)
chr3 (249-282)||(40370556-40370589)
chr3 (250-283)||(40545563-40545596)
chr3 (250-283)||(47005153-47005186)
chr3 (250-283)||(47336549-47336582)
chr3 (249-282)||(49323782-49323815)
chr3 (250-279)||(49324114-49324143)
chr3 (250-283)||(51550414-51550447)
chr3 (246-283)||(51834906-51834943)
chr3 (250-283)||(53113442-53113475)
chr3 (250-283)||(54608831-54608864)
chr3 (246-282)||(275797-275833)
chr3 (249-289)||(3152078-3152118)
chr3 (250-282)||(4034717-4034749)
chr3 (251-283)||(20405192-20405224)
chr3 (249-281)||(25610097-25610129)
chr3 (132-180)||(25710589-25710637)
chr3 (250-282)||(26090046-26090078)
chr3 (251-279)||(27499059-27499087)
chr3 (251-283)||(30106189-30106221)
chr3 (134-162)||(35533488-35533516)
chr3 (134-162)||(39132663-39132691)
chr3 (251-283)||(39820632-39820664)
chr3 (250-282)||(43441270-43441302)
chr3 (251-283)||(47005488-47005520)
chr3 (251-283)||(47433837-47433869)
chr3 (132-180)||(52342274-52342322)
[»] scaffold0160 (2 HSPs)
scaffold0160 (133-177)||(27214-27258)
scaffold0160 (250-289)||(27332-27371)
[»] chr6 (43 HSPs)
chr6 (132-180)||(30037938-30037986)
chr6 (133-180)||(19267668-19267715)
chr6 (246-282)||(19267565-19267601)
chr6 (133-180)||(19690610-19690657)
chr6 (133-180)||(23628900-23628947)
chr6 (246-283)||(1007123-1007160)
chr6 (250-283)||(3414720-3414753)
chr6 (250-283)||(30479062-30479095)
chr6 (249-289)||(6412546-6412586)
chr6 (133-180)||(8169891-8169938)
chr6 (133-180)||(12419810-12419857)
chr6 (249-288)||(13268103-13268142)
chr6 (137-180)||(30479276-30479319)
chr6 (249-284)||(33808618-33808653)
chr6 (249-283)||(1007476-1007510)
chr6 (249-283)||(3414386-3414420)
chr6 (249-283)||(3968976-3969010)
chr6 (249-283)||(12299107-12299141)
chr6 (249-283)||(19321098-19321132)
chr6 (249-283)||(20467685-20467719)
chr6 (249-283)||(21147403-21147437)
chr6 (249-283)||(21385551-21385585)
chr6 (249-283)||(21994370-21994404)
chr6 (249-283)||(22543353-22543387)
chr6 (250-288)||(22543686-22543724)
chr6 (249-283)||(23502236-23502270)
chr6 (249-283)||(25137324-25137358)
chr6 (250-283)||(3276322-3276355)
chr6 (250-283)||(3968644-3968677)
chr6 (250-283)||(6412217-6412250)
chr6 (250-283)||(8170119-8170152)
chr6 (250-283)||(10910932-10910965)
chr6 (250-283)||(12757609-12757642)
chr6 (246-283)||(14655378-14655415)
chr6 (250-283)||(17765008-17765041)
chr6 (250-283)||(18024343-18024376)
chr6 (250-283)||(19267880-19267913)
chr6 (250-283)||(19690392-19690425)
chr6 (250-283)||(21385250-21385283)
chr6 (247-283)||(6468309-6468345)
chr6 (246-282)||(17771911-17771947)
chr6 (250-282)||(24901239-24901271)
chr6 (250-282)||(31198615-31198647)
[»] chr8 (75 HSPs)
chr8 (133-180)||(23939762-23939809)
chr8 (133-180)||(13155101-13155148)
chr8 (133-180)||(13779274-13779321)
chr8 (133-180)||(30969497-30969544)
chr8 (137-180)||(33652293-33652336)
chr8 (283-381)||(37767485-37767586)
chr8 (249-283)||(25702511-25702545)
chr8 (246-283)||(9496687-9496724)
chr8 (246-283)||(10540746-10540783)
chr8 (135-180)||(17073907-17073951)
chr8 (135-180)||(17574319-17574363)
chr8 (249-289)||(28346387-28346427)
chr8 (249-293)||(28346725-28346769)
chr8 (246-282)||(37536383-37536419)
chr8 (250-289)||(3512234-3512273)
chr8 (133-180)||(3680631-3680678)
chr8 (133-180)||(6146697-6146744)
chr8 (250-289)||(11019513-11019552)
chr8 (133-180)||(14848040-14848087)
chr8 (133-168)||(24090334-24090369)
chr8 (133-180)||(28497469-28497516)
chr8 (133-180)||(33652271-33652318)
chr8 (246-280)||(2811437-2811471)
chr8 (249-283)||(4710187-4710221)
chr8 (249-279)||(9175338-9175368)
chr8 (249-283)||(10337416-10337450)
chr8 (249-283)||(11019824-11019858)
chr8 (249-283)||(11976372-11976406)
chr8 (132-162)||(13796450-13796480)
chr8 (249-291)||(16643652-16643694)
chr8 (249-283)||(20277691-20277725)
chr8 (249-283)||(21064318-21064352)
chr8 (249-283)||(27117943-27117977)
chr8 (249-283)||(32726238-32726272)
chr8 (249-283)||(34963299-34963333)
chr8 (249-283)||(37536085-37536119)
chr8 (249-282)||(2728564-2728597)
chr8 (246-283)||(4375974-4376011)
chr8 (249-282)||(7326388-7326421)
chr8 (250-283)||(7420229-7420262)
chr8 (250-283)||(8298943-8298976)
chr8 (250-283)||(9496340-9496373)
chr8 (250-283)||(10337118-10337151)
chr8 (249-282)||(13232529-13232562)
chr8 (250-283)||(17073806-17073839)
chr8 (250-283)||(17574431-17574464)
chr8 (246-283)||(18549200-18549237)
chr8 (250-283)||(20984145-20984178)
chr8 (250-283)||(25600229-25600262)
chr8 (250-283)||(25702777-25702810)
chr8 (249-282)||(30969684-30969717)
chr8 (250-283)||(32725906-32725939)
chr8 (246-283)||(33636321-33636358)
chr8 (250-283)||(35097327-35097360)
chr8 (249-282)||(35097659-35097692)
chr8 (250-283)||(35346966-35346999)
chr8 (250-283)||(38930301-38930334)
chr8 (246-282)||(1162909-1162945)
chr8 (250-282)||(1778564-1778596)
chr8 (250-282)||(3031570-3031602)
chr8 (250-282)||(7185972-7186004)
chr8 (250-282)||(8298587-8298619)
chr8 (133-161)||(9175129-9175157)
chr8 (250-282)||(14489041-14489073)
chr8 (249-281)||(24090455-24090487)
chr8 (132-180)||(32195516-32195564)
chr8 (246-282)||(33526052-33526088)
chr8 (250-282)||(34963632-34963664)
chr8 (250-282)||(35346629-35346661)
chr8 (133-161)||(36044518-36044546)
chr8 (246-282)||(40844156-40844192)
chr8 (250-282)||(42132864-42132896)
chr8 (250-282)||(42133122-42133154)
chr8 (136-180)||(42429858-42429902)
chr8 (250-282)||(42430088-42430120)
[»] chr7 (55 HSPs)
chr7 (133-180)||(2945583-2945630)
chr7 (133-180)||(6892131-6892178)
chr7 (133-176)||(22540035-22540078)
chr7 (133-180)||(28262794-28262841)
chr7 (249-283)||(5354767-5354801)
chr7 (316-378)||(11669615-11669677)
chr7 (133-171)||(19005716-19005754)
chr7 (249-283)||(39438740-39438774)
chr7 (246-283)||(5233807-5233844)
chr7 (246-283)||(11767239-11767276)
chr7 (135-180)||(44841572-44841617)
chr7 (249-289)||(38486757-38486797)
chr7 (249-288)||(3975805-3975844)
chr7 (250-289)||(46828937-46828976)
chr7 (249-283)||(1614871-1614905)
chr7 (249-283)||(3975548-3975582)
chr7 (246-280)||(6847083-6847117)
chr7 (249-283)||(8144625-8144659)
chr7 (249-283)||(9659656-9659690)
chr7 (249-283)||(23399611-23399645)
chr7 (249-283)||(23676419-23676453)
chr7 (249-283)||(25092515-25092549)
chr7 (249-283)||(25988716-25988750)
chr7 (249-283)||(26878038-26878072)
chr7 (249-283)||(28262712-28262746)
chr7 (249-283)||(29198629-29198663)
chr7 (249-283)||(41053841-41053875)
chr7 (249-283)||(41054203-41054237)
chr7 (249-283)||(45228885-45228919)
chr7 (249-283)||(48192455-48192489)
chr7 (249-283)||(48852443-48852477)
chr7 (250-283)||(1614558-1614591)
chr7 (249-282)||(6589021-6589054)
chr7 (250-283)||(8144294-8144327)
chr7 (250-283)||(14543709-14543742)
chr7 (246-283)||(14738968-14739005)
chr7 (249-282)||(16853556-16853589)
chr7 (249-290)||(20388266-20388307)
chr7 (250-283)||(23399944-23399977)
chr7 (133-162)||(24717383-24717412)
chr7 (250-283)||(25092159-25092192)
chr7 (250-283)||(25988384-25988417)
chr7 (249-282)||(27037593-27037626)
chr7 (250-283)||(27458398-27458431)
chr7 (250-279)||(34877777-34877806)
chr7 (250-283)||(35837923-35837956)
chr7 (250-283)||(35838305-35838338)
chr7 (250-283)||(38486477-38486510)
chr7 (250-283)||(42254957-42254990)
chr7 (250-283)||(46759657-46759690)
chr7 (250-282)||(19005598-19005630)
chr7 (250-282)||(28528905-28528937)
chr7 (251-283)||(29198302-29198334)
chr7 (251-283)||(44568325-44568357)
chr7 (133-180)||(46829047-46829095)
[»] chr5 (53 HSPs)
chr5 (133-180)||(5103727-5103774)
chr5 (135-180)||(42596670-42596715)
chr5 (133-177)||(1286788-1286832)
chr5 (136-180)||(42553861-42553905)
chr5 (246-283)||(35876687-35876724)
chr5 (133-180)||(5103749-5103796)
chr5 (137-180)||(5904111-5904154)
chr5 (249-288)||(5917427-5917466)
chr5 (133-180)||(35609487-35609534)
chr5 (249-283)||(1104857-1104891)
chr5 (249-283)||(1105115-1105149)
chr5 (249-283)||(1381578-1381612)
chr5 (249-283)||(12144906-12144940)
chr5 (249-283)||(19565798-19565832)
chr5 (249-283)||(19685347-19685381)
chr5 (249-283)||(20660947-20660981)
chr5 (249-283)||(20986056-20986090)
chr5 (249-283)||(24443379-24443413)
chr5 (249-283)||(24443711-24443745)
chr5 (249-283)||(28213372-28213406)
chr5 (250-292)||(31037709-31037751)
chr5 (250-288)||(32108802-32108840)
chr5 (249-283)||(34125599-34125633)
chr5 (249-283)||(35928063-35928097)
chr5 (249-283)||(38170513-38170547)
chr5 (249-283)||(40764414-40764448)
chr5 (250-279)||(1287013-1287042)
chr5 (250-283)||(1381246-1381279)
chr5 (250-283)||(4736510-4736543)
chr5 (250-283)||(5917125-5917158)
chr5 (249-282)||(6912497-6912530)
chr5 (250-283)||(17070534-17070567)
chr5 (250-283)||(18258161-18258194)
chr5 (250-283)||(18258495-18258528)
chr5 (250-283)||(19565466-19565499)
chr5 (250-283)||(19685016-19685049)
chr5 (250-283)||(20690732-20690765)
chr5 (133-162)||(20690947-20690976)
chr5 (246-283)||(25779126-25779163)
chr5 (250-283)||(35877020-35877053)
chr5 (250-283)||(37271674-37271707)
chr5 (246-283)||(38786158-38786195)
chr5 (246-283)||(39379574-39379611)
chr5 (250-283)||(40029140-40029173)
chr5 (250-282)||(45138-45170)
chr5 (249-281)||(2636960-2636992)
chr5 (246-282)||(20661275-20661311)
chr5 (250-282)||(30888160-30888192)
chr5 (134-162)||(32888896-32888924)
chr5 (250-282)||(35928426-35928458)
chr5 (250-282)||(36973678-36973710)
chr5 (250-282)||(38962806-38962838)
chr5 (249-293)||(40764747-40764791)
[»] chr4 (64 HSPs)
chr4 (133-180)||(54903214-54903261)
chr4 (133-170)||(14594315-14594352)
chr4 (133-180)||(12791712-12791759)
chr4 (133-180)||(50754025-50754072)
chr4 (249-282)||(8905201-8905234)
chr4 (250-283)||(13764775-13764808)
chr4 (137-180)||(8904973-8905016)
chr4 (133-180)||(23779097-23779144)
chr4 (248-283)||(35119291-35119326)
chr4 (133-180)||(44925587-44925634)
chr4 (246-289)||(45474560-45474603)
chr4 (249-283)||(4211560-4211594)
chr4 (132-162)||(5827868-5827898)
chr4 (249-283)||(13530680-13530714)
chr4 (249-283)||(14487801-14487835)
chr4 (250-288)||(14488155-14488193)
chr4 (249-283)||(24774044-24774078)
chr4 (249-283)||(29499181-29499215)
chr4 (249-283)||(30046759-30046793)
chr4 (249-283)||(30061100-30061134)
chr4 (249-283)||(35415298-35415332)
chr4 (249-283)||(41620223-41620257)
chr4 (249-283)||(43231356-43231390)
chr4 (249-283)||(53915682-53915716)
chr4 (134-180)||(54208543-54208589)
chr4 (249-283)||(54903442-54903476)
chr4 (250-283)||(5827941-5827974)
chr4 (250-283)||(11693089-11693122)
chr4 (250-283)||(12152153-12152186)
chr4 (250-283)||(12152461-12152494)
chr4 (250-283)||(13631227-13631260)
chr4 (250-283)||(13631567-13631600)
chr4 (250-283)||(14594205-14594238)
chr4 (135-168)||(14791616-14791649)
chr4 (250-283)||(14791774-14791807)
chr4 (133-162)||(19903476-19903505)
chr4 (249-282)||(23245231-23245264)
chr4 (250-283)||(25423923-25423956)
chr4 (250-283)||(25424280-25424313)
chr4 (250-283)||(29420505-29420538)
chr4 (246-283)||(31560330-31560367)
chr4 (250-283)||(35464017-35464050)
chr4 (249-282)||(35464349-35464382)
chr4 (249-282)||(42848358-42848391)
chr4 (250-283)||(43231087-43231120)
chr4 (249-282)||(46115414-46115447)
chr4 (249-282)||(46128548-46128581)
chr4 (249-282)||(46292392-46292425)
chr4 (133-162)||(51738258-51738287)
chr4 (250-283)||(53916015-53916048)
chr4 (246-283)||(55072388-55072425)
chr4 (250-282)||(5827655-5827687)
chr4 (250-282)||(13073759-13073791)
chr4 (133-161)||(13073975-13074003)
chr4 (251-283)||(13074094-13074126)
chr4 (250-282)||(13764613-13764645)
chr4 (250-282)||(19321827-19321859)
chr4 (250-290)||(22099880-22099920)
chr4 (250-282)||(25358508-25358540)
chr4 (250-282)||(26412552-26412584)
chr4 (334-378)||(27433007-27433051)
chr4 (250-282)||(31560663-31560695)
chr4 (250-282)||(42824059-42824091)
chr4 (250-282)||(53308036-53308068)
[»] chr2 (49 HSPs)
chr2 (133-180)||(29832004-29832051)
chr2 (133-180)||(34963900-34963947)
chr2 (133-178)||(1138198-1138243)
chr2 (133-180)||(3172381-3172428)
chr2 (133-180)||(5164051-5164098)
chr2 (133-180)||(13215163-13215210)
chr2 (133-180)||(37228894-37228941)
chr2 (246-283)||(14003408-14003445)
chr2 (246-283)||(30215421-30215458)
chr2 (246-283)||(37911084-37911121)
chr2 (246-283)||(43671933-43671970)
chr2 (250-293)||(4424153-4424196)
chr2 (249-283)||(2481524-2481558)
chr2 (249-283)||(4423894-4423928)
chr2 (249-283)||(14003709-14003743)
chr2 (249-283)||(15842790-15842824)
chr2 (249-283)||(16522990-16523024)
chr2 (249-283)||(16523292-16523326)
chr2 (249-283)||(16673738-16673772)
chr2 (249-283)||(18113088-18113122)
chr2 (249-283)||(24358615-24358649)
chr2 (249-283)||(25705416-25705450)
chr2 (249-283)||(29859839-29859873)
chr2 (249-283)||(31909445-31909479)
chr2 (135-180)||(1295285-1295330)
chr2 (249-282)||(5334751-5334784)
chr2 (249-282)||(5335007-5335040)
chr2 (250-283)||(13215059-13215092)
chr2 (250-283)||(16673410-16673443)
chr2 (250-283)||(20131316-20131349)
chr2 (249-282)||(20131648-20131681)
chr2 (250-283)||(25705084-25705117)
chr2 (250-283)||(31644840-31644873)
chr2 (250-283)||(33576085-33576118)
chr2 (250-283)||(35155587-35155620)
chr2 (246-279)||(35686302-35686335)
chr2 (250-283)||(37228732-37228765)
chr2 (249-282)||(40124966-40124999)
chr2 (250-283)||(41451836-41451869)
chr2 (250-283)||(44559061-44559094)
chr2 (250-282)||(146658-146690)
chr2 (251-283)||(10671629-10671661)
chr2 (246-282)||(18113418-18113454)
chr2 (250-282)||(19604946-19604978)
chr2 (251-283)||(30215840-30215872)
chr2 (250-282)||(34964127-34964159)
chr2 (247-283)||(39367725-39367761)
chr2 (246-282)||(41791276-41791312)
chr2 (250-282)||(42695868-42695900)
[»] chr1 (69 HSPs)
chr1 (133-180)||(19198687-19198734)
chr1 (133-180)||(39025233-39025280)
chr1 (133-180)||(24510157-24510204)
chr1 (133-180)||(34002791-34002838)
chr1 (133-180)||(49073794-49073841)
chr1 (250-283)||(15211510-15211543)
chr1 (246-283)||(49074017-49074054)
chr1 (249-289)||(31258332-31258372)
chr1 (247-283)||(42483236-42483272)
chr1 (246-282)||(45638580-45638616)
chr1 (133-180)||(12322820-12322867)
chr1 (133-180)||(12360818-12360865)
chr1 (133-180)||(12360840-12360887)
chr1 (249-296)||(16060852-16060899)
chr1 (133-180)||(32035530-32035577)
chr1 (133-180)||(33234762-33234809)
chr1 (249-283)||(3753539-3753573)
chr1 (133-167)||(8364697-8364731)
chr1 (249-283)||(12360602-12360636)
chr1 (249-283)||(15516581-15516615)
chr1 (249-283)||(16026905-16026939)
chr1 (249-283)||(24507810-24507844)
chr1 (249-283)||(33045657-33045691)
chr1 (249-283)||(33234545-33234579)
chr1 (249-283)||(38164262-38164296)
chr1 (250-288)||(45380266-45380304)
chr1 (246-280)||(46183686-46183720)
chr1 (249-283)||(47819231-47819265)
chr1 (249-283)||(47819563-47819597)
chr1 (250-283)||(3247197-3247230)
chr1 (250-283)||(7867325-7867358)
chr1 (250-283)||(8140433-8140466)
chr1 (250-283)||(10631496-10631529)
chr1 (250-283)||(10887232-10887265)
chr1 (250-283)||(10887566-10887599)
chr1 (250-283)||(12360936-12360969)
chr1 (133-162)||(15211615-15211644)
chr1 (250-283)||(15526330-15526363)
chr1 (249-286)||(18302354-18302391)
chr1 (250-283)||(19720711-19720744)
chr1 (250-283)||(24611144-24611177)
chr1 (249-282)||(24653802-24653835)
chr1 (250-283)||(24654135-24654168)
chr1 (135-180)||(29688152-29688197)
chr1 (250-283)||(30322928-30322961)
chr1 (250-283)||(32035756-32035789)
chr1 (249-282)||(33000305-33000338)
chr1 (250-283)||(33000637-33000670)
chr1 (251-288)||(35722313-35722350)
chr1 (250-283)||(36912852-36912885)
chr1 (249-282)||(38151179-38151212)
chr1 (250-283)||(39747803-39747836)
chr1 (249-282)||(40718441-40718474)
chr1 (249-282)||(41738796-41738829)
chr1 (250-283)||(42482978-42483011)
chr1 (250-283)||(45638862-45638895)
chr1 (250-283)||(48588988-48589021)
chr1 (250-283)||(48594075-48594108)
chr1 (250-283)||(48598686-48598719)
chr1 (134-162)||(4789524-4789552)
chr1 (250-282)||(10631164-10631196)
chr1 (250-282)||(12322938-12322970)
chr1 (250-282)||(24510276-24510308)
chr1 (250-282)||(24977778-24977810)
chr1 (246-282)||(26191359-26191395)
chr1 (250-282)||(31060787-31060819)
chr1 (250-282)||(35056530-35056562)
chr1 (250-282)||(40718110-40718142)
chr1 (249-281)||(44157696-44157728)
[»] scaffold0005 (4 HSPs)
scaffold0005 (133-170)||(223026-223063)
scaffold0005 (135-176)||(48082-48123)
scaffold0005 (250-283)||(47924-47957)
scaffold0005 (250-283)||(223140-223173)
[»] scaffold0078 (1 HSPs)
scaffold0078 (247-283)||(3751-3787)
[»] scaffold0024 (1 HSPs)
scaffold0024 (249-289)||(75731-75771)
[»] scaffold0085 (1 HSPs)
scaffold0085 (133-176)||(34802-34845)
[»] scaffold0684 (1 HSPs)
scaffold0684 (249-283)||(2627-2661)
[»] scaffold0026 (1 HSPs)
scaffold0026 (249-283)||(82673-82707)
[»] scaffold0007 (3 HSPs)
scaffold0007 (246-283)||(2500-2537)
scaffold0007 (134-162)||(2718-2746)
scaffold0007 (250-282)||(2851-2883)
[»] scaffold0106 (1 HSPs)
scaffold0106 (251-283)||(30935-30967)
[»] scaffold0008 (1 HSPs)
scaffold0008 (246-282)||(44170-44206)
[»] scaffold0001 (1 HSPs)
scaffold0001 (250-282)||(148250-148282)


Alignment Details
Target: chr3 (Bit Score: 389; Significance: 0; HSPs: 86)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 389; E-Value: 0
Query Start/End: Original strand, 263 - 694
Target Start/End: Complemental strand, 42199379 - 42198944
Alignment:
Q  263 accaaaaccatattttagcctcaatttaataacaaaataattgagt---atgtctagttaaaaattggagaggatgtttgtgttgtttaagaaaacctta 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42199379 accaaaaccatattttagcctcaatttaataacaaaataattgagtttaatgtctagttaaaaattggagaggatgtttgtgttgtttaagaaaacctta 42199280  T
Q  360 tcagaggttagtgtaatttacctttataaaactaatcctactggactattatggagttatttggataagnnnnnnn-gaagaaaaacaaacagtttttcg 458  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||    
T  42199279 tcagaggttagtgtaatttacctttataaaactaatcctactggactattatggagttatttggataagaaaaaagagaagaaaaacaaacagtttttcg 42199180  T
Q  459 attcactatggttataatgatataaaaaggttacaacaacttgaaaaacctcactcatttgactcttggttataactatctcacttccaccacatcattg 558  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42199179 attcactatggttataatgatataaaaaggttacaacaacttgaaaaacctcactcatttgactcttggttataactatctcacttccaccacatcattg 42199080  T
Q  559 aattttcagttctttgattcccttaaaaactcaactcagttgcaagttcttatggtcaattataacaacttgactggggaacttccaaattctgttgaat 658  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42199079 aattttcagttctttgattcccttaaaaactcaactcagttgcaagttcttatggtcaattataacaacttgactggggaacttccaaattctgttgaat 42198980  T
Q  659 atctgtgaggcaatctacaacagttctgtgctgctc 694  Q
    |||||||||||||||||||||||||||||| |||||    
T  42198979 atctgtgaggcaatctacaacagttctgtgttgctc 42198944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 492 - 693
Target Start/End: Complemental strand, 42211717 - 42211516
Alignment:
Q  492 caacaacttgaaaaacctcactcatttgactcttggttataactatctcacttccaccacatcattgaattttcagttctttgattcccttaaaaactca 591  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||| ||||||  |||||||    
T  42211717 caacaacttgaaaaacctcactcatttgactcttggtaaaaactatctcacttccaacacatcattgaattttcagttctttgaatcccttcgaaactca 42211618  T
Q  592 actcagttgcaagttcttatggtcaattataacaacttgactggggaacttccaaattctgttgaatatctgtgaggcaatctacaacagttctgtgctg 691  Q
    |||||||||||  |||||||| ||||| ||||||||||||| ||||||||||||| ||| ||||| ||||| | | |||||||||||||||| |||| ||    
T  42211617 actcagttgcagattcttatgatcaatgataacaacttgaccggggaacttccaagttcggttgattatctttcaagcaatctacaacagttttgtgttg 42211518  T
Q  692 ct 693  Q
    ||    
T  42211517 ct 42211516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 492 - 693
Target Start/End: Complemental strand, 42223933 - 42223732
Alignment:
Q  492 caacaacttgaaaaacctcactcatttgactcttggttataactatctcacttccaccacatcattgaattttcagttctttgattcccttaaaaactca 591  Q
    ||||||||||||||||||||||||||||  |||  || | ||  ||||||||||||| |||||||||||||||||||||||||||||||||  |||||||    
T  42223933 caacaacttgaaaaacctcactcatttgtatctcagtaagaataatctcacttccactacatcattgaattttcagttctttgattcccttcgaaactca 42223834  T
Q  592 actcagttgcaagttcttatggtcaattataacaacttgactggggaacttccaaattctgttgaatatctgtgaggcaatctacaacagttctgtgctg 691  Q
    |||||||| ||| |||||||||||||| ||||||||||||| ||||||||||||| ||| ||||| ||||| | | |||||||||||||||| |||| ||    
T  42223833 actcagttacaaattcttatggtcaatgataacaacttgaccggggaacttccaagttcggttgattatctttcaagcaatctacaacagttttgtgttg 42223734  T
Q  692 ct 693  Q
    ||    
T  42223733 ct 42223732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 88 - 180
Target Start/End: Complemental strand, 42199528 - 42199436
Alignment:
Q  88 catagaatgaaaaacagtattggccacagttcgaagaaaacagctcctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  42199528 catagaatgaaaaacagtattggccacagttcgaagaaaacagctcctgcaaaatattttacttttgaaaatagtccctggaggtactatttt 42199436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 4322039 - 4322086
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    ||||||||||||||||||||| |||||||| |||||||| ||||||||    
T  4322039 cctgcaaaatattttacttttaaaaatagtccctggagggactatttt 4322086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 36732822 - 36732869
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    ||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  36732822 cctgcaaaatattttacttttgaaaatagtatctggagggactatttt 36732869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 38232393 - 38232346
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||||||||||||||||||||||| |||||||  ||||||||    
T  38232393 cctgcaaaatattttacttttgaaaatagtccctggagagactatttt 38232346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 46724624 - 46724671
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||||||||| ||||||||||||||| |||||| ||||||||    
T  46724624 cctgcaaaatattttatttttgaaaatagttcatggagggactatttt 46724671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 47005369 - 47005416
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||||||||||||||||||||||| ||||||||  |||||||    
T  47005369 cctgcaaaatattttacttttgaaaatagtccctggaggggctatttt 47005416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 48924207 - 48924241
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||||||||||||||||||||||||||||||    
T  48924207 gcatatttacagggaccaaaaccatattttagcct 48924241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 246 - 283
Target Start/End: Original strand, 1721416 - 1721453
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcct 283  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  1721416 gaagcatatttgcagggaccaaaaccatattttagcct 1721453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 246 - 283
Target Start/End: Complemental strand, 14772247 - 14772210
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcct 283  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  14772247 gaagcatatttgcagggaccaaaaccatattttagcct 14772210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 246 - 283
Target Start/End: Complemental strand, 47336264 - 47336227
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcct 283  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  47336264 gaagcatatttgcagggaccaaaaccatattttagcct 47336227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 53113598 - 53113643
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatt 178  Q
    |||||||||||||||||||||||||||||| |||| ||| ||||||    
T  53113598 cctgcaaaatattttacttttgaaaatagtccctgaagggactatt 53113643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 246 - 282
Target Start/End: Complemental strand, 15979374 - 15979338
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcc 282  Q
    ||||||||||| |||||||||||||||||||||||||    
T  15979374 gaagcatatttgcagggaccaaaaccatattttagcc 15979338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 251 - 283
Target Start/End: Original strand, 20644845 - 20644877
Alignment:
Q  251 atatttacagggaccaaaaccatattttagcct 283  Q
    |||||||||||||||||||||||||||||||||    
T  20644845 atatttacagggaccaaaaccatattttagcct 20644877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 246 - 282
Target Start/End: Complemental strand, 26089766 - 26089730
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcc 282  Q
    ||||||||||| |||||||||||||||||||||||||    
T  26089766 gaagcatatttgcagggaccaaaaccatattttagcc 26089730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 246 - 282
Target Start/End: Original strand, 45313827 - 45313863
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcc 282  Q
    ||||||||||| |||||||||||||||||||||||||    
T  45313827 gaagcatatttgcagggaccaaaaccatattttagcc 45313863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 50009134 - 50009182
Alignment:
Q  132 tcctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||||||||||||||||||||||||   |||||| ||||||||    
T  50009134 tcctgcaaaatattttacttttgaaaatagtctttggagggactatttt 50009182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 1721302 - 1721349
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    ||||||||||||||||||| |||||||||| |||||||| | ||||||    
T  1721302 cctgcaaaatattttacttctgaaaatagtccctggagggattatttt 1721349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 249 - 292
Target Start/End: Original strand, 22008857 - 22008900
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcctcaatttaat 292  Q
    |||||||| |||||||||||||||||||||||||  ||||||||    
T  22008857 gcatatttgcagggaccaaaaccatattttagccaaaatttaat 22008900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 25609847 - 25609894
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||||||||  ||||||||||||| |||||||| ||||||||    
T  25609847 cctgcaaaatattttgtttttgaaaatagtccctggagggactatttt 25609894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 180
Target Start/End: Original strand, 54767389 - 54767432
Alignment:
Q  137 caaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    ||||||||||||||||| |||||||| |||||||| ||||||||    
T  54767389 caaaatattttacttttaaaaatagtccctggagggactatttt 54767432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 246 - 280
Target Start/End: Original strand, 2486866 - 2486900
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttag 280  Q
    ||||||||||| |||||||||||||||||||||||    
T  2486866 gaagcatatttgcagggaccaaaaccatattttag 2486900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 9262122 - 9262156
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  9262122 gcatatttgcagggaccaaaaccatattttagcct 9262156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 9603886 - 9603920
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  9603886 gcatatttgcagggaccaaaaccatattttagcct 9603920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 19844548 - 19844582
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  19844548 gcatatttgcagggaccaaaaccatattttagcct 19844582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 20611056 - 20611010
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcctcaatttaat 292  Q
    ||||||||||| ||||||| |||||||||||||||||| | ||||||    
T  20611056 gaagcatatttgcagggactaaaaccatattttagccttattttaat 20611010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 133 - 171
Target Start/End: Original strand, 20644720 - 20644758
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggagg 171  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  20644720 cctgcaaaatattttacttctgaaaatagtccctggagg 20644758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 21553922 - 21553888
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  21553922 gcatatttgcagggaccaaaaccatattttagcct 21553888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 25616008 - 25615974
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  25616008 gcatatttgcagggaccaaaaccatattttagcct 25615974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 26799921 - 26799887
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||||||||||| ||||||||||||||||||    
T  26799921 gcatatttacagggactaaaaccatattttagcct 26799887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 27681533 - 27681579
Alignment:
Q  134 ctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    ||||||||||||||||||||||||||||| |||| | | ||||||||    
T  27681533 ctgcaaaatattttacttttgaaaatagtccctgaatggactatttt 27681579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 28552054 - 28552020
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  28552054 gcatatttgcagggaccaaaaccatattttagcct 28552020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 28552350 - 28552384
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  28552350 gcatatttgcagggaccaaaaccatattttagcct 28552384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 133 - 167
Target Start/End: Complemental strand, 29490528 - 29490494
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctg 167  Q
    |||||||||||||||||||||||||||||| ||||    
T  29490528 cctgcaaaatattttacttttgaaaatagtccctg 29490494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 31480169 - 31480135
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  31480169 gcatatttgcagggaccaaaaccatattttagcct 31480135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 45002054 - 45002020
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  45002054 gcatatttgcagggaccaaaaccatattttagcct 45002020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 51550115 - 51550081
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  51550115 gcatatttgcagggaccaaaaccatattttagcct 51550081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 52342228 - 52342194
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  52342228 gcatatttgcagggaccaaaaccatattttagcct 52342194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 133 - 167
Target Start/End: Complemental strand, 53113682 - 53113648
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctg 167  Q
    |||||||||||||||||||||||||||||| ||||    
T  53113682 cctgcaaaatattttacttttgaaaatagtccctg 53113648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 54608551 - 54608517
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  54608551 gcatatttgcagggaccaaaaccatattttagcct 54608517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 474076 - 474043
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  474076 catatttgcagggaccaaaaccatattttagcct 474043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 474376 - 474409
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  474376 catatttgcagggaccaaaaccatattttagcct 474409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 3417819 - 3417852
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    |||||||||||||||||||| |||||||||||||    
T  3417819 catatttacagggaccaaaaacatattttagcct 3417852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 282
Target Start/End: Original strand, 4035020 - 4035053
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcc 282  Q
    |||||||| |||||||||||||||||||||||||    
T  4035020 gcatatttgcagggaccaaaaccatattttagcc 4035053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 283
Target Start/End: Original strand, 5345653 - 5345690
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcct 283  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  5345653 gaagcatatttgcagggactaaaaccatattttagcct 5345690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 283
Target Start/End: Original strand, 9597059 - 9597096
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcct 283  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  9597059 gaagcatatttgcagggaacaaaaccatattttagcct 9597096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 12740939 - 12740906
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  12740939 catatttgcagggaccaaaaccatattttagcct 12740906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 12741239 - 12741272
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  12741239 catatttgcagggaccaaaaccatattttagcct 12741272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 282
Target Start/End: Complemental strand, 16123172 - 16123139
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcc 282  Q
    |||||||||||||||| |||||||||||||||||    
T  16123172 gcatatttacagggactaaaaccatattttagcc 16123139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 162
Target Start/End: Original strand, 19297803 - 19297832
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagt 162  Q
    ||||||||||||||||||||||||||||||    
T  19297803 cctgcaaaatattttacttttgaaaatagt 19297832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 162
Target Start/End: Complemental strand, 19297868 - 19297839
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagt 162  Q
    ||||||||||||||||||||||||||||||    
T  19297868 cctgcaaaatattttacttttgaaaatagt 19297839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 283
Target Start/End: Original strand, 28452340 - 28452377
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||||||  |||||||||||||||||||||||||    
T  28452340 gaagcatatttgtagggaccaaaaccatattttagcct 28452377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 29490711 - 29490744
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  29490711 catatttgcagggaccaaaaccatattttagcct 29490744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 29678168 - 29678127
Alignment:
Q  137 caaaatattttacttttgaaaatagttcctggaggtactatt 178  Q
    |||||||||||||||||||||||||| | |||||| ||||||    
T  29678168 caaaatattttacttttgaaaatagtccttggagggactatt 29678127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 39132874 - 39132907
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  39132874 catatttgcagggaccaaaaccatattttagcct 39132907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 294
Target Start/End: Original strand, 39288865 - 39288910
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcctcaatttaataa 294  Q
    |||||||| ||||||  |||||||||||||||||| ||||||||||    
T  39288865 gcatatttgcagggattaaaaccatattttagcctaaatttaataa 39288910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 283
Target Start/End: Complemental strand, 40277858 - 40277821
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcct 283  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  40277858 gaagcatatttgcagggaccaaaaccacattttagcct 40277821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 162
Target Start/End: Original strand, 40278037 - 40278066
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagt 162  Q
    ||||||||||||||||||||||||||||||    
T  40278037 cctgcaaaatattttacttttgaaaatagt 40278066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 282
Target Start/End: Original strand, 40370556 - 40370589
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcc 282  Q
    |||||||| |||||||||||||||||||||||||    
T  40370556 gcatatttgcagggaccaaaaccatattttagcc 40370589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 40545596 - 40545563
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  40545596 catatttgcagggaccaaaaccatattttagcct 40545563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 47005186 - 47005153
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  47005186 catatttgcagggaccaaaaccatattttagcct 47005153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 47336549 - 47336582
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  47336549 catatttgcagggaccaaaaccatattttagcct 47336582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 282
Target Start/End: Complemental strand, 49323815 - 49323782
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcc 282  Q
    |||||||| |||||||||||||||||||||||||    
T  49323815 gcatatttgcagggaccaaaaccatattttagcc 49323782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 279
Target Start/End: Original strand, 49324114 - 49324143
Alignment:
Q  250 catatttacagggaccaaaaccatatttta 279  Q
    ||||||||||||||||||||||||||||||    
T  49324114 catatttacagggaccaaaaccatatttta 49324143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 51550414 - 51550447
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  51550414 catatttgcagggaccaaaaccatattttagcct 51550447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 283
Target Start/End: Original strand, 51834906 - 51834943
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcct 283  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  51834906 gaagcatatttgcagggactaaaaccatattttagcct 51834943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 53113475 - 53113442
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  53113475 catatttgcagggaccaaaaccatattttagcct 53113442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 54608831 - 54608864
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  54608831 catatttgcagggaccaaaaccatattttagcct 54608864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 246 - 282
Target Start/End: Original strand, 275797 - 275833
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcc 282  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  275797 gaagcatatttacagggactaaaatcatattttagcc 275833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 249 - 289
Target Start/End: Original strand, 3152078 - 3152118
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcctcaattt 289  Q
    |||||||| ||||||| |||||||||||||||||| |||||    
T  3152078 gcatatttgcagggactaaaaccatattttagcctaaattt 3152118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Complemental strand, 4034749 - 4034717
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    ||||||| |||||||||||||||||||||||||    
T  4034749 catatttgcagggaccaaaaccatattttagcc 4034717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 251 - 283
Target Start/End: Original strand, 20405192 - 20405224
Alignment:
Q  251 atatttacagggaccaaaaccatattttagcct 283  Q
    |||||| ||||||||||||||||||||||||||    
T  20405192 atatttgcagggaccaaaaccatattttagcct 20405224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 249 - 281
Target Start/End: Original strand, 25610097 - 25610129
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagc 281  Q
    |||||||| ||||||||||||||||||||||||    
T  25610097 gcatatttgcagggaccaaaaccatattttagc 25610129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 25710589 - 25710637
Alignment:
Q  132 tcctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    ||||||||||| ||||  ||||||||||||| |||||||| ||||||||    
T  25710589 tcctgcaaaattttttgtttttgaaaatagtccctggagggactatttt 25710637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Original strand, 26090046 - 26090078
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    ||||||| |||||||||||||||||||||||||    
T  26090046 catatttgcagggaccaaaaccatattttagcc 26090078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 251 - 279
Target Start/End: Original strand, 27499059 - 27499087
Alignment:
Q  251 atatttacagggaccaaaaccatatttta 279  Q
    |||||||||||||||||||||||||||||    
T  27499059 atatttacagggaccaaaaccatatttta 27499087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 251 - 283
Target Start/End: Original strand, 30106189 - 30106221
Alignment:
Q  251 atatttacagggaccaaaaccatattttagcct 283  Q
    |||||| ||||||||||||||||||||||||||    
T  30106189 atatttgcagggaccaaaaccatattttagcct 30106221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 134 - 162
Target Start/End: Complemental strand, 35533516 - 35533488
Alignment:
Q  134 ctgcaaaatattttacttttgaaaatagt 162  Q
    |||||||||||||||||||||||||||||    
T  35533516 ctgcaaaatattttacttttgaaaatagt 35533488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 134 - 162
Target Start/End: Complemental strand, 39132691 - 39132663
Alignment:
Q  134 ctgcaaaatattttacttttgaaaatagt 162  Q
    |||||||||||||||||||||||||||||    
T  39132691 ctgcaaaatattttacttttgaaaatagt 39132663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 251 - 283
Target Start/End: Original strand, 39820632 - 39820664
Alignment:
Q  251 atatttacagggaccaaaaccatattttagcct 283  Q
    |||||| ||||||||||||||||||||||||||    
T  39820632 atatttgcagggaccaaaaccatattttagcct 39820664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Complemental strand, 43441302 - 43441270
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    ||||||| |||||||||||||||||||||||||    
T  43441302 catatttgcagggaccaaaaccatattttagcc 43441270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 251 - 283
Target Start/End: Original strand, 47005488 - 47005520
Alignment:
Q  251 atatttacagggaccaaaaccatattttagcct 283  Q
    |||||| ||||||||||||||||||||||||||    
T  47005488 atatttgcagggaccaaaaccatattttagcct 47005520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 251 - 283
Target Start/End: Original strand, 47433837 - 47433869
Alignment:
Q  251 atatttacagggaccaaaaccatattttagcct 283  Q
    |||||| ||||||||||||||||||||||||||    
T  47433837 atatttgcagggaccaaaaccatattttagcct 47433869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 52342274 - 52342322
Alignment:
Q  132 tcctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    ||||||||||||||||  ||||||||||||| |||| ||| ||||||||    
T  52342274 tcctgcaaaatattttgtttttgaaaatagtccctgcagggactatttt 52342322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 2)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 27214 - 27258
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactat 177  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  27214 cctgcaaaatattttacttttgaaaatagttcctggagggactat 27258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 289
Target Start/End: Original strand, 27332 - 27371
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcctcaattt 289  Q
    ||||||| |||||||||||||||||||||||||| |||||    
T  27332 catatttgcagggaccaaaaccatattttagcctaaattt 27371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 30037938 - 30037986
Alignment:
Q  132 tcctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  30037938 tcctgcaaaatattttacttttgaaaatagtccctggagggactatttt 30037986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 19267715 - 19267668
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||    
T  19267715 cctgcaaaatattttacttttgaaaatagtccctggagggactatttt 19267668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 246 - 282
Target Start/End: Complemental strand, 19267601 - 19267565
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcc 282  Q
    |||||||||||||||||||||||||||||||||||||    
T  19267601 gaagcatatttacagggaccaaaaccatattttagcc 19267565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 19690610 - 19690657
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    ||||||||| |||||||||||||||||||| |||||||| ||||||||    
T  19690610 cctgcaaaaaattttacttttgaaaatagtccctggagggactatttt 19690657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 23628947 - 23628900
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    ||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  23628947 cctgcaaaatattttacttttgaaaatagtcactggagggactatttt 23628900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 246 - 283
Target Start/End: Complemental strand, 1007160 - 1007123
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcct 283  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  1007160 gaagcatatttgcagggaccaaaaccatattttagcct 1007123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 3414720 - 3414753
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||||||||||||||||||||||||||||||    
T  3414720 catatttacagggaccaaaaccatattttagcct 3414753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 30479095 - 30479062
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||||||||||||||||||||||||||||||    
T  30479095 catatttacagggaccaaaaccatattttagcct 30479062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 289
Target Start/End: Original strand, 6412546 - 6412586
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcctcaattt 289  Q
    |||||||| |||||||||||||||||||||||||| |||||    
T  6412546 gcatatttgcagggaccaaaaccatattttagccttaattt 6412586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 8169938 - 8169891
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    ||||||||||||||||||||||||||| || |||| ||| ||||||||    
T  8169938 cctgcaaaatattttacttttgaaaattgtccctgtagggactatttt 8169891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 12419857 - 12419810
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||||||||  ||||||||||||| |||||||| ||||||||    
T  12419857 cctgcaaaatattttgtttttgaaaatagtccctggagggactatttt 12419810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 13268142 - 13268103
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcctcaatt 288  Q
    |||||||| |||||||||||||||||||||||||| ||||    
T  13268142 gcatatttgcagggaccaaaaccatattttagccttaatt 13268103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 180
Target Start/End: Original strand, 30479276 - 30479319
Alignment:
Q  137 caaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||||||||||||||||||| |||||||  ||||||||    
T  30479276 caaaatattttacttttgaaaatagtccctggagagactatttt 30479319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 249 - 284
Target Start/End: Complemental strand, 33808653 - 33808618
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcctc 284  Q
    |||||||||||||||| |||||||||||||||||||    
T  33808653 gcatatttacagggactaaaaccatattttagcctc 33808618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 1007476 - 1007510
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  1007476 gcatatttgcagggaccaaaaccatattttagcct 1007510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 3414420 - 3414386
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  3414420 gcatatttgcagggaccaaaaccatattttagcct 3414386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 3968976 - 3969010
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  3968976 gcatatttgcagggaccaaaaccatattttagcct 3969010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 12299107 - 12299141
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  12299107 gcatatttgcagggaccaaaaccatattttagcct 12299141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 19321098 - 19321132
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  19321098 gcatatttgcagggaccaaaaccatattttagcct 19321132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 20467685 - 20467719
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  20467685 gcatatttgcagggaccaaaaccatattttagcct 20467719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 21147437 - 21147403
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  21147437 gcatatttgcagggaccaaaaccatattttagcct 21147403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 21385551 - 21385585
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  21385551 gcatatttgcagggaccaaaaccatattttagcct 21385585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 21994370 - 21994404
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  21994370 gcatatttgcagggaccaaaaccatattttagcct 21994404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 22543387 - 22543353
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  22543387 gcatatttgcagggaccaaaaccatattttagcct 22543353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 250 - 288
Target Start/End: Original strand, 22543686 - 22543724
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcctcaatt 288  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  22543686 catatttgcagggaccaaaaccatattttagcctaaatt 22543724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 23502270 - 23502236
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  23502270 gcatatttgcagggaccaaaaccatattttagcct 23502236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 25137324 - 25137358
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  25137324 gcatatttgcagggaccaaaaccatattttagcct 25137358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 3276322 - 3276355
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  3276322 catatttgcagggaccaaaaccatattttagcct 3276355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 3968677 - 3968644
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  3968677 catatttgcagggaccaaaaccatattttagcct 3968644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 6412250 - 6412217
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  6412250 catatttgcagggaccaaaaccatattttagcct 6412217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 8170119 - 8170152
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  8170119 catatttgcagggaccaaaaccatattttagcct 8170152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 10910932 - 10910965
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  10910932 catatttgcagggaccaaaaccatattttagcct 10910965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 12757642 - 12757609
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  12757642 catatttgcagggaccaaaaccatattttagcct 12757609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 283
Target Start/End: Complemental strand, 14655415 - 14655378
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcct 283  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  14655415 gaagcatatttgcagggactaaaaccatattttagcct 14655378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 17765041 - 17765008
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  17765041 catatttgcagggaccaaaaccatattttagcct 17765008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 18024343 - 18024376
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  18024343 catatttgcagggaccaaaaccatattttagcct 18024376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 19267880 - 19267913
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    |||||||||||| |||||||||||||||||||||    
T  19267880 catatttacaggaaccaaaaccatattttagcct 19267913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 19690425 - 19690392
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  19690425 catatttgcagggaccaaaaccatattttagcct 19690392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 21385283 - 21385250
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  21385283 catatttgcagggaccaaaaccatattttagcct 21385250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 247 - 283
Target Start/End: Complemental strand, 6468345 - 6468309
Alignment:
Q  247 aagcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  6468345 aagcatatttgcagggactaaaaccatattttagcct 6468309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 246 - 282
Target Start/End: Complemental strand, 17771947 - 17771911
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcc 282  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  17771947 gaagcatatttgcagggactaaaaccatattttagcc 17771911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Complemental strand, 24901271 - 24901239
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    ||||||| |||||||||||||||||||||||||    
T  24901271 catatttgcagggaccaaaaccatattttagcc 24901239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Complemental strand, 31198647 - 31198615
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    ||||||| |||||||||||||||||||||||||    
T  31198647 catatttgcagggaccaaaaccatattttagcc 31198615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 75)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 23939762 - 23939809
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||    
T  23939762 cctgcaaaatattttacttttgaaaatagtccctggaggaactatttt 23939809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 13155101 - 13155148
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||||||||| ||||||||||||| |||||||| ||||||||    
T  13155101 cctgcaaaatattttaattttgaaaatagtccctggagggactatttt 13155148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 13779321 - 13779274
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    ||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  13779321 cctgcaaaatattttacttttgaaaatagtctctggagggactatttt 13779274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 30969544 - 30969497
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||||||||||||| ||||||||| |||||||| ||||||||    
T  30969544 cctgcaaaatattttactttagaaaatagtccctggagggactatttt 30969497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 33652336 - 33652293
Alignment:
Q  137 caaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||    
T  33652336 caaaatattttacgtttgaaaatagttcctggaggaactatttt 33652293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 283 - 381
Target Start/End: Original strand, 37767485 - 37767586
Alignment:
Q  283 tcaatttaataacaaaataattgag---tatgtctagttaaaaattggagaggatgtttgtgttgtttaagaaaaccttatcagaggttagtgtaattta 379  Q
    ||||||||||||||||||||  |||   ||||| |||||||||| | ||| ||||||||||||| ||||| || |||| |   |||||||||||||||||    
T  37767485 tcaatttaataacaaaataagggaggtttatgtttagttaaaaactagaggggatgtttgtgttatttaacaatacctcaggggaggttagtgtaattta 37767584  T
Q  380 cc 381  Q
    ||    
T  37767585 cc 37767586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 25702545 - 25702511
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||||||||||||||||||||||||||||||    
T  25702545 gcatatttacagggaccaaaaccatattttagcct 25702511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 246 - 283
Target Start/End: Original strand, 9496687 - 9496724
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcct 283  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  9496687 gaagcatatttgcagggaccaaaaccatattttagcct 9496724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 246 - 283
Target Start/End: Original strand, 10540746 - 10540783
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcct 283  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  10540746 gaagcatatttgcagggaccaaaaccatattttagcct 10540783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 17073951 - 17073907
Alignment:
Q  135 tgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||    
T  17073951 tgcaaaatattttacttttgaaaatagtt-ctggagggactatttt 17073907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 17574319 - 17574363
Alignment:
Q  135 tgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||    
T  17574319 tgcaaaatattttacttttgaaaatagtt-ctggagggactatttt 17574363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 289
Target Start/End: Complemental strand, 28346427 - 28346387
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcctcaattt 289  Q
    |||||||| |||||||||||||||||||||||||| |||||    
T  28346427 gcatatttgcagggaccaaaaccatattttagccttaattt 28346387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 28346725 - 28346769
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcctcaatttaata 293  Q
    |||||||| |||||||||||||||||||||||||| || ||||||    
T  28346725 gcatatttgcagggaccaaaaccatattttagcctaaaattaata 28346769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 246 - 282
Target Start/End: Original strand, 37536383 - 37536419
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcc 282  Q
    ||||||||||| |||||||||||||||||||||||||    
T  37536383 gaagcatatttgcagggaccaaaaccatattttagcc 37536419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 289
Target Start/End: Original strand, 3512234 - 3512273
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcctcaattt 289  Q
    ||||||| |||||||||||||||||||||||||| |||||    
T  3512234 catatttgcagggaccaaaaccatattttagcctaaattt 3512273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 3680678 - 3680631
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||||||||||||||||||| ||| |||||||| || |||||    
T  3680678 cctgcaaaatattttacttttgaaaaaagtccctggagggacgatttt 3680631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 6146697 - 6146744
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||| ||||  |||||||||||||||||||||| ||||||||    
T  6146697 cctgcaaaattttttgtttttgaaaatagttcctggagggactatttt 6146744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 289
Target Start/End: Complemental strand, 11019552 - 11019513
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcctcaattt 289  Q
    ||||||| |||||||||||||||||||||||||| |||||    
T  11019552 catatttgcagggaccaaaaccatattttagccttaattt 11019513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 14848040 - 14848087
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    ||||||||||||||||||| | |||||||| |||||||| ||||||||    
T  14848040 cctgcaaaatattttacttctaaaaatagtccctggagggactatttt 14848087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 168
Target Start/End: Original strand, 24090334 - 24090369
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctgg 168  Q
    |||||||||||||||||||||||||||||| |||||    
T  24090334 cctgcaaaatattttacttttgaaaatagtccctgg 24090369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 28497469 - 28497516
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||||||||||||||||||||||| |||  ||| ||||||||    
T  28497469 cctgcaaaatattttacttttgaaaatagtccctccagggactatttt 28497516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 33652271 - 33652318
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||||||||| |||||||||||||||||  ||| ||||||||    
T  33652271 cctgcaaaatattttatttttgaaaatagttcctccaggaactatttt 33652318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 246 - 280
Target Start/End: Complemental strand, 2811471 - 2811437
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttag 280  Q
    ||||||||||||||| |||||||||||||||||||    
T  2811471 gaagcatatttacagagaccaaaaccatattttag 2811437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 4710187 - 4710221
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  4710187 gcatatttgcagggaccaaaaccatattttagcct 4710221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 279
Target Start/End: Original strand, 9175338 - 9175368
Alignment:
Q  249 gcatatttacagggaccaaaaccatatttta 279  Q
    |||||||||||||||||||||||||||||||    
T  9175338 gcatatttacagggaccaaaaccatatttta 9175368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 10337416 - 10337450
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  10337416 gcatatttgcagggaccaaaaccatattttagcct 10337450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 11019824 - 11019858
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  11019824 gcatatttgcagggaccaaaaccatattttagcct 11019858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 11976406 - 11976372
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  11976406 gcatatttgcagggaccaaaaccatattttagcct 11976372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 132 - 162
Target Start/End: Original strand, 13796450 - 13796480
Alignment:
Q  132 tcctgcaaaatattttacttttgaaaatagt 162  Q
    |||||||||||||||||||||||||||||||    
T  13796450 tcctgcaaaatattttacttttgaaaatagt 13796480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 291
Target Start/End: Complemental strand, 16643694 - 16643652
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcctcaatttaa 291  Q
    |||||||| ||||||| |||||||||||||||||| |||||||    
T  16643694 gcatatttgcagggactaaaaccatattttagcctaaatttaa 16643652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 20277725 - 20277691
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  20277725 gcatatttgcagggaccaaaaccatattttagcct 20277691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 21064352 - 21064318
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  21064352 gcatatttgcagggaccaaaaccatattttagcct 21064318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 27117943 - 27117977
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  27117943 gcatatttgcagggaccaaaaccatattttagcct 27117977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 32726238 - 32726272
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  32726238 gcatatttgcagggaccaaaaccatattttagcct 32726272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 34963333 - 34963299
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  34963333 gcatatttgcagggaccaaaaccatattttagcct 34963299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 37536119 - 37536085
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  37536119 gcatatttgcagggaccaaaaccatattttagcct 37536085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 282
Target Start/End: Original strand, 2728564 - 2728597
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcc 282  Q
    |||||||| |||||||||||||||||||||||||    
T  2728564 gcatatttgcagggaccaaaaccatattttagcc 2728597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 283
Target Start/End: Original strand, 4375974 - 4376011
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcct 283  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  4375974 gaagcatatttgcagggactaaaaccatattttagcct 4376011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 282
Target Start/End: Original strand, 7326388 - 7326421
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcc 282  Q
    |||||||| |||||||||||||||||||||||||    
T  7326388 gcatatttgcagggaccaaaaccatattttagcc 7326421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 7420262 - 7420229
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  7420262 catatttgcagggaccaaaaccatattttagcct 7420229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 8298943 - 8298976
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  8298943 catatttgcagggaccaaaaccatattttagcct 8298976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 9496373 - 9496340
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  9496373 catatttgcagggaccaaaaccatattttagcct 9496340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 10337151 - 10337118
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  10337151 catatttgcagggaccaaaaccatattttagcct 10337118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 282
Target Start/End: Original strand, 13232529 - 13232562
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcc 282  Q
    |||||||| |||||||||||||||||||||||||    
T  13232529 gcatatttgcagggaccaaaaccatattttagcc 13232562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 17073839 - 17073806
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  17073839 catatttgcagggaccaaaaccatattttagcct 17073806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 17574431 - 17574464
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  17574431 catatttgcagggaccaaaaccatattttagcct 17574464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 283
Target Start/End: Complemental strand, 18549237 - 18549200
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcct 283  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  18549237 gaagcatatttgcagggactaaaaccatattttagcct 18549200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 20984178 - 20984145
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  20984178 catatttgcagggaccaaaaccatattttagcct 20984145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 25600262 - 25600229
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  25600262 catatttgcagggaccaaaaccatattttagcct 25600229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 25702777 - 25702810
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  25702777 catatttgcagggaccaaaaccatattttagcct 25702810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 282
Target Start/End: Original strand, 30969684 - 30969717
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcc 282  Q
    |||||||| |||||||||||||||||||||||||    
T  30969684 gcatatttgcagggaccaaaaccatattttagcc 30969717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 32725939 - 32725906
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  32725939 catatttgcagggaccaaaaccatattttagcct 32725906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 283
Target Start/End: Complemental strand, 33636358 - 33636321
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcct 283  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  33636358 gaagcatatttgcagggactaaaaccatattttagcct 33636321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 35097360 - 35097327
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  35097360 catatttgcagggaccaaaaccatattttagcct 35097327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 282
Target Start/End: Original strand, 35097659 - 35097692
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcc 282  Q
    |||||||| |||||||||||||||||||||||||    
T  35097659 gcatatttgcagggaccaaaaccatattttagcc 35097692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 35346966 - 35346999
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  35346966 catatttgcagggaccaaaaccatattttagcct 35346999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 38930334 - 38930301
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||||||||||| ||||||||||||||||||    
T  38930334 catatttacagggactaaaaccatattttagcct 38930301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 246 - 282
Target Start/End: Complemental strand, 1162945 - 1162909
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcc 282  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  1162945 gaagcatatttgcagggactaaaaccatattttagcc 1162909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Complemental strand, 1778596 - 1778564
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    ||||||| |||||||||||||||||||||||||    
T  1778596 catatttgcagggaccaaaaccatattttagcc 1778564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Original strand, 3031570 - 3031602
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    |||||||||||||||||||| ||||||||||||    
T  3031570 catatttacagggaccaaaaacatattttagcc 3031602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Original strand, 7185972 - 7186004
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    ||||||| |||||||||||||||||||||||||    
T  7185972 catatttgcagggaccaaaaccatattttagcc 7186004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Complemental strand, 8298619 - 8298587
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    ||||||| |||||||||||||||||||||||||    
T  8298619 catatttgcagggaccaaaaccatattttagcc 8298587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 133 - 161
Target Start/End: Complemental strand, 9175157 - 9175129
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatag 161  Q
    |||||||||||||||||||||||||||||    
T  9175157 cctgcaaaatattttacttttgaaaatag 9175129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Original strand, 14489041 - 14489073
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    ||||||| |||||||||||||||||||||||||    
T  14489041 catatttgcagggaccaaaaccatattttagcc 14489073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 249 - 281
Target Start/End: Original strand, 24090455 - 24090487
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagc 281  Q
    |||||||| ||||||||||||||||||||||||    
T  24090455 gcatatttgcagggaccaaaaccatattttagc 24090487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 32195564 - 32195516
Alignment:
Q  132 tcctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    ||||||||||||||||  ||||||||||||| |||| ||| ||||||||    
T  32195564 tcctgcaaaatattttgtttttgaaaatagtccctgaagggactatttt 32195516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 246 - 282
Target Start/End: Complemental strand, 33526088 - 33526052
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcc 282  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  33526088 gaagcatatttgcagggactaaaaccatattttagcc 33526052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Original strand, 34963632 - 34963664
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    ||||||| |||||||||||||||||||||||||    
T  34963632 catatttgcagggaccaaaaccatattttagcc 34963664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Complemental strand, 35346661 - 35346629
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    ||||||| |||||||||||||||||||||||||    
T  35346661 catatttgcagggaccaaaaccatattttagcc 35346629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 133 - 161
Target Start/End: Original strand, 36044518 - 36044546
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatag 161  Q
    |||||||||||||||||||||||||||||    
T  36044518 cctgcaaaatattttacttttgaaaatag 36044546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 246 - 282
Target Start/End: Complemental strand, 40844192 - 40844156
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcc 282  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  40844192 gaagcatatttgcagggactaaaaccatattttagcc 40844156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Complemental strand, 42132896 - 42132864
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    ||||||| |||||||||||||||||||||||||    
T  42132896 catatttgcagggaccaaaaccatattttagcc 42132864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Original strand, 42133122 - 42133154
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    ||||||| |||||||||||||||||||||||||    
T  42133122 catatttgcagggaccaaaaccatattttagcc 42133154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 42429902 - 42429858
Alignment:
Q  136 gcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    ||||||||||||||||||||||||||| || ||||| | ||||||    
T  42429902 gcaaaatattttacttttgaaaatagtccccggagggattatttt 42429858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Original strand, 42430088 - 42430120
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    ||||||| |||||||||||||||||||||||||    
T  42430088 catatttgcagggaccaaaaccatattttagcc 42430120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 2945630 - 2945583
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||    
T  2945630 cctgcaaaatattttacttttgaatatagttcctggagggactatttt 2945583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 6892178 - 6892131
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||||||||||||||||||| ||| |||||||| ||||||||    
T  6892178 cctgcaaaatattttacttttgaaaagagtccctggagggactatttt 6892131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 22540078 - 22540035
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtacta 176  Q
    |||||||||||||||||||||||||||||| |||||||| ||||    
T  22540078 cctgcaaaatattttacttttgaaaatagtccctggagggacta 22540035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 28262794 - 28262841
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||||||||||||||||||||||| ||| |||| ||||||||    
T  28262794 cctgcaaaatattttacttttgaaaatagtccctagagggactatttt 28262841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 5354801 - 5354767
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||||||||||||||||||||||||||||||    
T  5354801 gcatatttacagggaccaaaaccatattttagcct 5354767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 316 - 378
Target Start/End: Complemental strand, 11669677 - 11669615
Alignment:
Q  316 gttaaaaattggagaggatgtttgtgttgtttaagaaaaccttatcagaggttagtgtaattt 378  Q
    |||||||| | ||| ||||||||||||| |||||||| |||||||  ||||||||||||||||    
T  11669677 gttaaaaaatagagtggatgtttgtgttatttaagaagaccttatgggaggttagtgtaattt 11669615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 171
Target Start/End: Complemental strand, 19005754 - 19005716
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggagg 171  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  19005754 cctgcaaaatattttacttttgaaaatagtccctggagg 19005716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 39438774 - 39438740
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||||||||||||||||||||||||||||||    
T  39438774 gcatatttacagggaccaaaaccatattttagcct 39438740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 246 - 283
Target Start/End: Complemental strand, 5233844 - 5233807
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcct 283  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  5233844 gaagcatatttgcagggaccaaaaccatattttagcct 5233807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 246 - 283
Target Start/End: Original strand, 11767239 - 11767276
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcct 283  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  11767239 gaagcatatttgcagggaccaaaaccatattttagcct 11767276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 44841572 - 44841617
Alignment:
Q  135 tgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    ||||||||||||||||||||||||||||  ||||||| ||||||||    
T  44841572 tgcaaaatattttacttttgaaaatagtcgctggagggactatttt 44841617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 289
Target Start/End: Original strand, 38486757 - 38486797
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcctcaattt 289  Q
    ||||||||||||||| ||||||||||||||||||| |||||    
T  38486757 gcatatttacagggatcaaaaccatattttagcctaaattt 38486797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 3975805 - 3975844
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcctcaatt 288  Q
    |||||||| |||||||||||||||||||||||||| ||||    
T  3975805 gcatatttgcagggaccaaaaccatattttagcctaaatt 3975844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 289
Target Start/End: Complemental strand, 46828976 - 46828937
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcctcaattt 289  Q
    ||||||| |||||||||||||||||||||||||| |||||    
T  46828976 catatttgcagggaccaaaaccatattttagccttaattt 46828937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 1614871 - 1614905
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  1614871 gcatatttgcagggaccaaaaccatattttagcct 1614905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 3975582 - 3975548
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  3975582 gcatatttgcagggaccaaaaccatattttagcct 3975548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 246 - 280
Target Start/End: Original strand, 6847083 - 6847117
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttag 280  Q
    ||||||||||| |||||||||||||||||||||||    
T  6847083 gaagcatatttgcagggaccaaaaccatattttag 6847117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 8144625 - 8144659
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  8144625 gcatatttgcagggaccaaaaccatattttagcct 8144659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 9659656 - 9659690
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  9659656 gcatatttgcagggaccaaaaccatattttagcct 9659690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 23399645 - 23399611
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  23399645 gcatatttgcagggaccaaaaccatattttagcct 23399611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 23676419 - 23676453
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  23676419 gcatatttgcagggaccaaaaccatattttagcct 23676453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 25092515 - 25092549
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  25092515 gcatatttgcagggaccaaaaccatattttagcct 25092549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 25988716 - 25988750
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  25988716 gcatatttgcagggaccaaaaccatattttagcct 25988750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 26878038 - 26878072
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  26878038 gcatatttgcagggaccaaaaccatattttagcct 26878072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 28262746 - 28262712
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  28262746 gcatatttgcagggaccaaaaccatattttagcct 28262712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 29198629 - 29198663
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  29198629 gcatatttgcagggaccaaaaccatattttagcct 29198663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 41053875 - 41053841
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  41053875 gcatatttgcagggaccaaaaccatattttagcct 41053841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 41054203 - 41054237
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  41054203 gcatatttgcagggaccaaaaccatattttagcct 41054237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 45228885 - 45228919
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  45228885 gcatatttgcagggaccaaaaccatattttagcct 45228919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 48192455 - 48192489
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  48192455 gcatatttgcagggaccaaaaccatattttagcct 48192489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 48852477 - 48852443
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  48852477 gcatatttgcagggaccaaaaccatattttagcct 48852443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 1614591 - 1614558
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  1614591 catatttgcagggaccaaaaccatattttagcct 1614558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 282
Target Start/End: Complemental strand, 6589054 - 6589021
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcc 282  Q
    |||||||| |||||||||||||||||||||||||    
T  6589054 gcatatttgcagggaccaaaaccatattttagcc 6589021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 8144327 - 8144294
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  8144327 catatttgcagggaccaaaaccatattttagcct 8144294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 14543742 - 14543709
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  14543742 catatttgcagggaccaaaaccatattttagcct 14543709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 283
Target Start/End: Original strand, 14738968 - 14739005
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcct 283  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  14738968 gaagcatatttgcagggactaaaaccatattttagcct 14739005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 282
Target Start/End: Original strand, 16853556 - 16853589
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcc 282  Q
    |||||||| |||||||||||||||||||||||||    
T  16853556 gcatatttgcagggaccaaaaccatattttagcc 16853589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 290
Target Start/End: Complemental strand, 20388307 - 20388266
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcctcaattta 290  Q
    |||||||| ||||||| |||||||||||||||||| ||||||    
T  20388307 gcatatttgcagggactaaaaccatattttagcctaaattta 20388266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 23399944 - 23399977
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  23399944 catatttgcagggaccaaaaccatattttagcct 23399977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 162
Target Start/End: Original strand, 24717383 - 24717412
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagt 162  Q
    ||||||||||||||||||||||||||||||    
T  24717383 cctgcaaaatattttacttttgaaaatagt 24717412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 25092192 - 25092159
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  25092192 catatttgcagggaccaaaaccatattttagcct 25092159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 25988417 - 25988384
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  25988417 catatttgcagggaccaaaaccatattttagcct 25988384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 282
Target Start/End: Complemental strand, 27037626 - 27037593
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcc 282  Q
    |||||||| |||||||||||||||||||||||||    
T  27037626 gcatatttgcagggaccaaaaccatattttagcc 27037593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 27458431 - 27458398
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  27458431 catatttgcagggaccaaaaccatattttagcct 27458398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 279
Target Start/End: Complemental strand, 34877806 - 34877777
Alignment:
Q  250 catatttacagggaccaaaaccatatttta 279  Q
    ||||||||||||||||||||||||||||||    
T  34877806 catatttacagggaccaaaaccatatttta 34877777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 35837956 - 35837923
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  35837956 catatttgcagggaccaaaaccatattttagcct 35837923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 35838305 - 35838338
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  35838305 catatttgcagggaccaaaaccatattttagcct 35838338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 38486510 - 38486477
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    |||||||||||||||||||| |||||||||||||    
T  38486510 catatttacagggaccaaaatcatattttagcct 38486477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 42254990 - 42254957
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    |||||||||||||||||||| |||||||||||||    
T  42254990 catatttacagggaccaaaagcatattttagcct 42254957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 46759690 - 46759657
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  46759690 catatttgcagggaccaaaaccatattttagcct 46759657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Complemental strand, 19005630 - 19005598
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    ||||||||||||||||||||| |||||||||||    
T  19005630 catatttacagggaccaaaactatattttagcc 19005598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Complemental strand, 28528937 - 28528905
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    |||||||||||| ||||||||||||||||||||    
T  28528937 catatttacaggaaccaaaaccatattttagcc 28528905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 251 - 283
Target Start/End: Complemental strand, 29198334 - 29198302
Alignment:
Q  251 atatttacagggaccaaaaccatattttagcct 283  Q
    |||||| ||||||||||||||||||||||||||    
T  29198334 atatttgcagggaccaaaaccatattttagcct 29198302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 251 - 283
Target Start/End: Complemental strand, 44568357 - 44568325
Alignment:
Q  251 atatttacagggaccaaaaccatattttagcct 283  Q
    |||||| ||||||||||||||||||||||||||    
T  44568357 atatttgcagggaccaaaaccatattttagcct 44568325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 46829095 - 46829047
Alignment:
Q  133 cctgcaaaatattttactttt-gaaaatagttcctggaggtactatttt 180  Q
    ||||||||||||||||||||| ||||| |||||||||||| || |||||    
T  46829095 cctgcaaaatattttacttttggaaaaaagttcctggagggacgatttt 46829047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 5103727 - 5103774
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||    
T  5103727 cctgcaaaatattttatttttgaaaatagttcctggagggactatttt 5103774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 42596670 - 42596715
Alignment:
Q  135 tgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||    
T  42596670 tgcaaaatattttacttttgaaaatagtccctggagggactatttt 42596715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 1286832 - 1286788
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactat 177  Q
    |||||||||||||||||||||||||||||| |||||||| |||||    
T  1286832 cctgcaaaatattttacttttgaaaatagtccctggagggactat 1286788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 42553861 - 42553905
Alignment:
Q  136 gcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||    
T  42553861 gcaaaatattttacttttgaaaatagttcttggagggactatttt 42553905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 246 - 283
Target Start/End: Complemental strand, 35876724 - 35876687
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcct 283  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  35876724 gaagcatatttgcagggaccaaaaccatattttagcct 35876687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 5103796 - 5103749
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||||||||||||||||||||||| |||  ||| ||||||||    
T  5103796 cctgcaaaatattttacttttgaaaatagtccctccaggaactatttt 5103749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 5904154 - 5904111
Alignment:
Q  137 caaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||||||||||||||||||| ||| |||| ||||||||    
T  5904154 caaaatattttacttttgaaaatagtccctagagggactatttt 5904111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 5917427 - 5917466
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcctcaatt 288  Q
    |||||||| |||||||||||||||||||||||||| ||||    
T  5917427 gcatatttgcagggaccaaaaccatattttagccttaatt 5917466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 35609487 - 35609534
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||||||||||||||||||||||| | |||||| | ||||||    
T  35609487 cctgcaaaatattttacttttgaaaatagtccttggagggattatttt 35609534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 1104891 - 1104857
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  1104891 gcatatttgcagggaccaaaaccatattttagcct 1104857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 1105115 - 1105149
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  1105115 gcatatttgcagggaccaaaaccatattttagcct 1105149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 1381578 - 1381612
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  1381578 gcatatttgcagggaccaaaaccatattttagcct 1381612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 12144940 - 12144906
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||||||||||| ||||||||||||||||||    
T  12144940 gcatatttacagggacaaaaaccatattttagcct 12144906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 19565798 - 19565832
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  19565798 gcatatttgcagggaccaaaaccatattttagcct 19565832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 19685347 - 19685381
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  19685347 gcatatttgcagggaccaaaaccatattttagcct 19685381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 20660981 - 20660947
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  20660981 gcatatttgcagggaccaaaaccatattttagcct 20660947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 20986056 - 20986090
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  20986056 gcatatttgcagggaccaaaaccatattttagcct 20986090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 24443413 - 24443379
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  24443413 gcatatttgcagggaccaaaaccatattttagcct 24443379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 24443711 - 24443745
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  24443711 gcatatttgcagggaccaaaaccatattttagcct 24443745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 28213406 - 28213372
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  28213406 gcatatttgcagggaccaaaaccatattttagcct 28213372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 250 - 292
Target Start/End: Original strand, 31037709 - 31037751
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcctcaatttaat 292  Q
    ||||||| ||||||| |||||||||||||||||| ||||||||    
T  31037709 catatttgcagggactaaaaccatattttagcctaaatttaat 31037751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 250 - 288
Target Start/End: Complemental strand, 32108840 - 32108802
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcctcaatt 288  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  32108840 catatttgcagggaccaaaaccatattttagcctaaatt 32108802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 34125599 - 34125633
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||||||||||| ||||||||||||||||||    
T  34125599 gcatatttacagggactaaaaccatattttagcct 34125633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 35928097 - 35928063
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  35928097 gcatatttgcagggaccaaaaccatattttagcct 35928063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 38170547 - 38170513
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  38170547 gcatatttgcagggaccaaaaccatattttagcct 38170513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 40764448 - 40764414
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  40764448 gcatatttgcagggaccaaaaccatattttagcct 40764414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 279
Target Start/End: Original strand, 1287013 - 1287042
Alignment:
Q  250 catatttacagggaccaaaaccatatttta 279  Q
    ||||||||||||||||||||||||||||||    
T  1287013 catatttacagggaccaaaaccatatttta 1287042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 1381279 - 1381246
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  1381279 catatttgcagggaccaaaaccatattttagcct 1381246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 4736510 - 4736543
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  4736510 catatttgcagggaccaaaaccatattttagcct 4736543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 5917158 - 5917125
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  5917158 catatttgcagggaccaaaaccatattttagcct 5917125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 282
Target Start/End: Complemental strand, 6912530 - 6912497
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcc 282  Q
    |||||||| |||||||||||||||||||||||||    
T  6912530 gcatatttgcagggaccaaaaccatattttagcc 6912497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 17070567 - 17070534
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  17070567 catatttgcagggaccaaaaccatattttagcct 17070534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 18258194 - 18258161
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  18258194 catatttgcagggaccaaaaccatattttagcct 18258161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 18258495 - 18258528
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  18258495 catatttgcagggaccaaaaccatattttagcct 18258528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 19565499 - 19565466
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  19565499 catatttgcagggaccaaaaccatattttagcct 19565466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 19685049 - 19685016
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  19685049 catatttgcagggaccaaaaccatattttagcct 19685016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 20690765 - 20690732
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  20690765 catatttgcagggaccaaaaccatattttagcct 20690732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 162
Target Start/End: Original strand, 20690947 - 20690976
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagt 162  Q
    ||||||||||||||||||||||||||||||    
T  20690947 cctgcaaaatattttacttttgaaaatagt 20690976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 283
Target Start/End: Original strand, 25779126 - 25779163
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcct 283  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  25779126 gaagcatatttgcagggactaaaaccatattttagcct 25779163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 35877020 - 35877053
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  35877020 catatttgcagggaccaaaaccatattttagcct 35877053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 37271674 - 37271707
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  37271674 catatttgcagggaccaaaaccatattttagcct 37271707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 283
Target Start/End: Complemental strand, 38786195 - 38786158
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcct 283  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  38786195 gaagcatatttgcagggactaaaaccatattttagcct 38786158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 283
Target Start/End: Original strand, 39379574 - 39379611
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcct 283  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  39379574 gaagcatatttgcagggactaaaaccatattttagcct 39379611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 40029173 - 40029140
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||||||||||| ||||||||||||||||||    
T  40029173 catatttacagggactaaaaccatattttagcct 40029140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Complemental strand, 45170 - 45138
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    ||||||| |||||||||||||||||||||||||    
T  45170 catatttgcagggaccaaaaccatattttagcc 45138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 249 - 281
Target Start/End: Original strand, 2636960 - 2636992
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagc 281  Q
    |||||||| ||||||||||||||||||||||||    
T  2636960 gcatatttgcagggaccaaaaccatattttagc 2636992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 246 - 282
Target Start/End: Original strand, 20661275 - 20661311
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcc 282  Q
    ||||||||||| || ||||||||||||||||||||||    
T  20661275 gaagcatatttgcacggaccaaaaccatattttagcc 20661311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Complemental strand, 30888192 - 30888160
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    ||||||| |||||||||||||||||||||||||    
T  30888192 catatttgcagggaccaaaaccatattttagcc 30888160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 134 - 162
Target Start/End: Original strand, 32888896 - 32888924
Alignment:
Q  134 ctgcaaaatattttacttttgaaaatagt 162  Q
    |||||||||||||||||||||||||||||    
T  32888896 ctgcaaaatattttacttttgaaaatagt 32888924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Original strand, 35928426 - 35928458
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    ||||||| |||||||||||||||||||||||||    
T  35928426 catatttgcagggaccaaaaccatattttagcc 35928458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Original strand, 36973678 - 36973710
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    ||||||| |||||||||||||||||||||||||    
T  36973678 catatttccagggaccaaaaccatattttagcc 36973710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Complemental strand, 38962838 - 38962806
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    ||||||||||||||| |||||||||||||||||    
T  38962838 catatttacagggactaaaaccatattttagcc 38962806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 40764747 - 40764791
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcctcaatttaata 293  Q
    |||||||| |||||| |||||||||||||||||||  ||||||||    
T  40764747 gcatatttgcagggagcaaaaccatattttagcctttatttaata 40764791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 54903261 - 54903214
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||    
T  54903261 cctgcaaaatattttacttttgaaaatagtccctggagggactatttt 54903214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 133 - 170
Target Start/End: Complemental strand, 14594352 - 14594315
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggag 170  Q
    ||||||||||||||||||||||||||||||||||||||    
T  14594352 cctgcaaaatattttacttttgaaaatagttcctggag 14594315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 12791759 - 12791712
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||||||||||||||||||||| | |||||||| ||||||||    
T  12791759 cctgcaaaatattttacttttgaaaatattccctggagggactatttt 12791712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 50754072 - 50754025
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    ||||||||||||||||||||| |||||||| |||||||| ||||||||    
T  50754072 cctgcaaaatattttacttttaaaaatagtccctggagggactatttt 50754025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 249 - 282
Target Start/End: Original strand, 8905201 - 8905234
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcc 282  Q
    ||||||||||||||||||||||||||||||||||    
T  8905201 gcatatttacagggaccaaaaccatattttagcc 8905234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 13764775 - 13764808
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||||||||||||||||||||||||||||||    
T  13764775 catatttacagggaccaaaaccatattttagcct 13764808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 8905016 - 8904973
Alignment:
Q  137 caaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||||||||||||||||||| ||||||||  |||||||    
T  8905016 caaaatattttacttttgaaaatagtccctggaggggctatttt 8904973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 23779144 - 23779097
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||||||||  ||||||||||||| |||||||| ||||||||    
T  23779144 cctgcaaaatattttgtttttgaaaatagtccctggagggactatttt 23779097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 35119326 - 35119291
Alignment:
Q  248 agcatatttacagggaccaaaaccatattttagcct 283  Q
    ||||||||| ||||||||||||||||||||||||||    
T  35119326 agcatatttgcagggaccaaaaccatattttagcct 35119291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 44925634 - 44925587
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    ||||||||||||||||||||||||||||||  || |||| ||||||||    
T  44925634 cctgcaaaatattttacttttgaaaatagtctctagagggactatttt 44925587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 45474560 - 45474603
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcctcaattt 289  Q
    ||||||||||| ||||||| |||||||||||||||||| |||||    
T  45474560 gaagcatatttgcagggactaaaaccatattttagccttaattt 45474603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 4211594 - 4211560
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  4211594 gcatatttgcagggaccaaaaccatattttagcct 4211560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 132 - 162
Target Start/End: Original strand, 5827868 - 5827898
Alignment:
Q  132 tcctgcaaaatattttacttttgaaaatagt 162  Q
    |||||||||||||||||||||||||||||||    
T  5827868 tcctgcaaaatattttacttttgaaaatagt 5827898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 13530680 - 13530714
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  13530680 gcatatttgcagggaccaaaaccatattttagcct 13530714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 14487835 - 14487801
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  14487835 gcatatttgcagggaccaaaaccatattttagcct 14487801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 250 - 288
Target Start/End: Original strand, 14488155 - 14488193
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcctcaatt 288  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  14488155 catatttgcagggaccaaaaccatattttagcctaaatt 14488193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 24774078 - 24774044
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  24774078 gcatatttgcagggaccaaaaccatattttagcct 24774044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 29499215 - 29499181
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  29499215 gcatatttgcagggaccaaaaccatattttagcct 29499181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 30046759 - 30046793
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  30046759 gcatatttgcagggaccaaaaccatattttagcct 30046793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 30061100 - 30061134
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  30061100 gcatatttgcagggaccaaaaccatattttagcct 30061134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 35415332 - 35415298
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||||||||||| ||||||||||||||||||    
T  35415332 gcatatttacagggactaaaaccatattttagcct 35415298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 41620223 - 41620257
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||||||||||| ||||||||||||||||||    
T  41620223 gcatatttacagggactaaaaccatattttagcct 41620257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 43231356 - 43231390
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  43231356 gcatatttgcagggaccaaaaccatattttagcct 43231390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 53915716 - 53915682
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  53915716 gcatatttgcagggaccaaaaccatattttagcct 53915682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 54208543 - 54208589
Alignment:
Q  134 ctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    ||||||||||||||  |||||||||||||||||| ||| ||||||||    
T  54208543 ctgcaaaatattttgattttgaaaatagttcctgcagggactatttt 54208589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 54903442 - 54903476
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  54903442 gcatatttgcagggaccaaaaccatattttagcct 54903476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 5827941 - 5827974
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  5827941 catatttgcagggaccaaaaccatattttagcct 5827974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 11693089 - 11693122
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  11693089 catatttgcagggaccaaaaccatattttagcct 11693122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 12152186 - 12152153
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  12152186 catatttgcagggaccaaaaccatattttagcct 12152153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 12152461 - 12152494
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  12152461 catatttgcagggaccaaaaccatattttagcct 12152494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 13631260 - 13631227
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  13631260 catatttgcagggaccaaaaccatattttagcct 13631227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 13631567 - 13631600
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  13631567 catatttgcagggaccaaaaccatattttagcct 13631600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 14594238 - 14594205
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  14594238 catatttgcagggaccaaaaccatattttagcct 14594205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 168
Target Start/End: Complemental strand, 14791649 - 14791616
Alignment:
Q  135 tgcaaaatattttacttttgaaaatagttcctgg 168  Q
    |||||||||||||||||||||||||||| |||||    
T  14791649 tgcaaaatattttacttttgaaaatagtccctgg 14791616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 14791774 - 14791807
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  14791774 catatttgcagggaccaaaaccatattttagcct 14791807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 162
Target Start/End: Original strand, 19903476 - 19903505
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagt 162  Q
    ||||||||||||||||||||||||||||||    
T  19903476 cctgcaaaatattttacttttgaaaatagt 19903505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 282
Target Start/End: Complemental strand, 23245264 - 23245231
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcc 282  Q
    |||||||| |||||||||||||||||||||||||    
T  23245264 gcatatttgcagggaccaaaaccatattttagcc 23245231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 25423956 - 25423923
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  25423956 catatttgcagggaccaaaaccatattttagcct 25423923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 25424280 - 25424313
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  25424280 catatttgcagggaccaaaaccatattttagcct 25424313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 29420505 - 29420538
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  29420505 catatttgcagggaccaaaaccatattttagcct 29420538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 283
Target Start/End: Complemental strand, 31560367 - 31560330
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcct 283  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  31560367 gaagcatatttgcagggatcaaaaccatattttagcct 31560330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 35464050 - 35464017
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  35464050 catatttgcagggaccaaaaccatattttagcct 35464017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 282
Target Start/End: Original strand, 35464349 - 35464382
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcc 282  Q
    |||||||| |||||||||||||||||||||||||    
T  35464349 gcatatttgcagggaccaaaaccatattttagcc 35464382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 282
Target Start/End: Original strand, 42848358 - 42848391
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcc 282  Q
    |||||||| |||||||||||||||||||||||||    
T  42848358 gcatatttgcagggaccaaaaccatattttagcc 42848391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 43231120 - 43231087
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  43231120 catatttgcagggaccaaaaccatattttagcct 43231087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 282
Target Start/End: Complemental strand, 46115447 - 46115414
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcc 282  Q
    |||||||| |||||||||||||||||||||||||    
T  46115447 gcatatttgcagggaccaaaaccatattttagcc 46115414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 282
Target Start/End: Complemental strand, 46128581 - 46128548
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcc 282  Q
    |||||||| |||||||||||||||||||||||||    
T  46128581 gcatatttgcagggaccaaaaccatattttagcc 46128548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 282
Target Start/End: Complemental strand, 46292425 - 46292392
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcc 282  Q
    |||||||| |||||||||||||||||||||||||    
T  46292425 gcatatttgcagggaccaaaaccatattttagcc 46292392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 162
Target Start/End: Complemental strand, 51738287 - 51738258
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagt 162  Q
    ||||||||||||||||||||||||||||||    
T  51738287 cctgcaaaatattttacttttgaaaatagt 51738258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 53916015 - 53916048
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  53916015 catatttgcagggaccaaaaccatattttagcct 53916048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 283
Target Start/End: Complemental strand, 55072425 - 55072388
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcct 283  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  55072425 gaagcatatttgcagggactaaaaccatattttagcct 55072388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Complemental strand, 5827687 - 5827655
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    ||||||| |||||||||||||||||||||||||    
T  5827687 catatttgcagggaccaaaaccatattttagcc 5827655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Complemental strand, 13073791 - 13073759
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    ||||||| |||||||||||||||||||||||||    
T  13073791 catatttgcagggaccaaaaccatattttagcc 13073759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 133 - 161
Target Start/End: Original strand, 13073975 - 13074003
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatag 161  Q
    |||||||||||||||||||||||||||||    
T  13073975 cctgcaaaatattttacttttgaaaatag 13074003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 251 - 283
Target Start/End: Original strand, 13074094 - 13074126
Alignment:
Q  251 atatttacagggaccaaaaccatattttagcct 283  Q
    |||||| ||||||||||||||||||||||||||    
T  13074094 atatttgcagggaccaaaaccatattttagcct 13074126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Complemental strand, 13764645 - 13764613
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    ||||||| |||||||||||||||||||||||||    
T  13764645 catatttgcagggaccaaaaccatattttagcc 13764613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Original strand, 19321827 - 19321859
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    ||||||| |||||||||||||||||||||||||    
T  19321827 catatttgcagggaccaaaaccatattttagcc 19321859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 290
Target Start/End: Original strand, 22099880 - 22099920
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcctcaattta 290  Q
    ||||||| ||||||| |||||||||||||||||| ||||||    
T  22099880 catatttgcagggactaaaaccatattttagccttaattta 22099920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Original strand, 25358508 - 25358540
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    |||||||||||||||||||| ||||||||||||    
T  25358508 catatttacagggaccaaaatcatattttagcc 25358540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Original strand, 26412552 - 26412584
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    ||||||| |||||||||||||||||||||||||    
T  26412552 catatttgcagggaccaaaaccatattttagcc 26412584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 334 - 378
Target Start/End: Original strand, 27433007 - 27433051
Alignment:
Q  334 tgtttgtgttgtttaagaaaaccttatcagaggttagtgtaattt 378  Q
    |||||||||| |||||||||||||||   ||||||||||||||||    
T  27433007 tgtttgtgttatttaagaaaaccttacgggaggttagtgtaattt 27433051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Original strand, 31560663 - 31560695
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    ||||||| |||||||||||||||||||||||||    
T  31560663 catatttgcagggaccaaaaccatattttagcc 31560695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Original strand, 42824059 - 42824091
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    ||||||| |||||||||||||||||||||||||    
T  42824059 catatttgcagggaccaaaaccatattttagcc 42824091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Original strand, 53308036 - 53308068
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    ||||||| |||||||||||||||||||||||||    
T  53308036 catatttgcagggaccaaaaccatattttagcc 53308068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 29832004 - 29832051
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||    
T  29832004 cctgcaaaatattttacttttgaaaatagtccctggagggactatttt 29832051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 34963947 - 34963900
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||    
T  34963947 cctgcaaaatattttacttttgaaaatagttcttggagggactatttt 34963900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 1138198 - 1138243
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatt 178  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||    
T  1138198 cctgcaaaatattttacttttgaaaatagtccctggagggactatt 1138243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 3172381 - 3172428
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  3172381 cctgcaaaatattttacttttgtaaatagtccctggagggactatttt 3172428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 5164098 - 5164051
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||||||||||||||||||||||| ||| |||| ||||||||    
T  5164098 cctgcaaaatattttacttttgaaaatagtccctagagggactatttt 5164051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 13215210 - 13215163
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||||||||||||||||||||||| | |||||| ||||||||    
T  13215210 cctgcaaaatattttacttttgaaaatagtccttggagggactatttt 13215163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 37228894 - 37228941
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||||||||||||||||||||||| |||||| | ||||||||    
T  37228894 cctgcaaaatattttacttttgaaaatagtccctggatggactatttt 37228941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 246 - 283
Target Start/End: Complemental strand, 14003445 - 14003408
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcct 283  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  14003445 gaagcatatttgcagggaccaaaaccatattttagcct 14003408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 246 - 283
Target Start/End: Complemental strand, 30215458 - 30215421
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcct 283  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  30215458 gaagcatatttgcagggaccaaaaccatattttagcct 30215421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 246 - 283
Target Start/End: Original strand, 37911084 - 37911121
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcct 283  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  37911084 gaagcatatttgcagggaccaaaaccatattttagcct 37911121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 246 - 283
Target Start/End: Complemental strand, 43671970 - 43671933
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcct 283  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  43671970 gaagcatatttacagggacaaaaaccatattttagcct 43671933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 4424153 - 4424196
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcctcaatttaata 293  Q
    ||||||| ||||||||||||||||||||||||||  ||||||||    
T  4424153 catatttgcagggaccaaaaccatattttagccttgatttaata 4424196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 2481524 - 2481558
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  2481524 gcatatttgcagggaccaaaaccatattttagcct 2481558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 4423928 - 4423894
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  4423928 gcatatttgcagggaccaaaaccatattttagcct 4423894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 14003709 - 14003743
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  14003709 gcatatttgcagggaccaaaaccatattttagcct 14003743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 15842790 - 15842824
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  15842790 gcatatttgcagggaccaaaaccatattttagcct 15842824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 16523024 - 16522990
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  16523024 gcatatttgcagggaccaaaaccatattttagcct 16522990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 16523292 - 16523326
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  16523292 gcatatttgcagggaccaaaaccatattttagcct 16523326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 16673738 - 16673772
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  16673738 gcatatttgcagggaccaaaaccatattttagcct 16673772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 18113122 - 18113088
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  18113122 gcatatttgcagggaccaaaaccatattttagcct 18113088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 24358649 - 24358615
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  24358649 gcatatttgcagggaccaaaaccatattttagcct 24358615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 25705416 - 25705450
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  25705416 gcatatttgcagggaccaaaaccatattttagcct 25705450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 29859839 - 29859873
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  29859839 gcatatttgcagggaccaaaaccatattttagcct 29859873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 31909445 - 31909479
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  31909445 gcatatttgcagggaccaaaaccatattttagcct 31909479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 1295330 - 1295285
Alignment:
Q  135 tgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||||||| ||||||||||||| ||| |||| ||||||||    
T  1295330 tgcaaaatattttaattttgaaaatagtccctagaggaactatttt 1295285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 282
Target Start/End: Complemental strand, 5334784 - 5334751
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcc 282  Q
    |||||||| |||||||||||||||||||||||||    
T  5334784 gcatatttgcagggaccaaaaccatattttagcc 5334751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 282
Target Start/End: Original strand, 5335007 - 5335040
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcc 282  Q
    |||||||| |||||||||||||||||||||||||    
T  5335007 gcatatttgcagggaccaaaaccatattttagcc 5335040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 13215092 - 13215059
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  13215092 catatttgcagggaccaaaaccatattttagcct 13215059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 16673443 - 16673410
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  16673443 catatttgcagggaccaaaaccatattttagcct 16673410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 20131349 - 20131316
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  20131349 catatttgcagggaccaaaaccatattttagcct 20131316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 282
Target Start/End: Original strand, 20131648 - 20131681
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcc 282  Q
    |||||||| |||||||||||||||||||||||||    
T  20131648 gcatatttgcagggaccaaaaccatattttagcc 20131681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 25705117 - 25705084
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  25705117 catatttgcagggaccaaaaccatattttagcct 25705084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 31644873 - 31644840
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  31644873 catatttgcagggaccaaaaccatattttagcct 31644840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 33576085 - 33576118
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  33576085 catatttgcagggaccaaaaccatattttagcct 33576118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 35155587 - 35155620
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  35155587 catattttcagggaccaaaaccatattttagcct 35155620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 279
Target Start/End: Original strand, 35686302 - 35686335
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatatttta 279  Q
    |||||||||||||||||| |||||||||||||||    
T  35686302 gaagcatatttacagggatcaaaaccatatttta 35686335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 37228765 - 37228732
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  37228765 catatttgcagggaccaaaaccatattttagcct 37228732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 282
Target Start/End: Complemental strand, 40124999 - 40124966
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcc 282  Q
    |||||||| |||||||||||||||||||||||||    
T  40124999 gcatatttgcagggaccaaaaccatattttagcc 40124966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 41451869 - 41451836
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  41451869 catatttgcagggaccaaaaccatattttagcct 41451836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 44559094 - 44559061
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  44559094 catatttgcagggaccaaaaccatattttagcct 44559061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Original strand, 146658 - 146690
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    ||||||| |||||||||||||||||||||||||    
T  146658 catatttgcagggaccaaaaccatattttagcc 146690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 251 - 283
Target Start/End: Complemental strand, 10671661 - 10671629
Alignment:
Q  251 atatttacagggaccaaaaccatattttagcct 283  Q
    |||||| ||||||||||||||||||||||||||    
T  10671661 atatttgcagggaccaaaaccatattttagcct 10671629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 246 - 282
Target Start/End: Original strand, 18113418 - 18113454
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcc 282  Q
    |||||||||||  ||||||||||||||||||||||||    
T  18113418 gaagcatatttgtagggaccaaaaccatattttagcc 18113454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Original strand, 19604946 - 19604978
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    |||||||||||||||||||| ||||||||||||    
T  19604946 catatttacagggaccaaaaacatattttagcc 19604978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 251 - 283
Target Start/End: Original strand, 30215840 - 30215872
Alignment:
Q  251 atatttacagggaccaaaaccatattttagcct 283  Q
    |||||| ||||||||||||||||||||||||||    
T  30215840 atatttgcagggaccaaaaccatattttagcct 30215872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Original strand, 34964127 - 34964159
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    ||||||| |||||||||||||||||||||||||    
T  34964127 catatttgcagggaccaaaaccatattttagcc 34964159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 247 - 283
Target Start/End: Original strand, 39367725 - 39367761
Alignment:
Q  247 aagcatatttacagggaccaaaaccatattttagcct 283  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  39367725 aagcatatttacagggatcaagaccatattttagcct 39367761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 246 - 282
Target Start/End: Original strand, 41791276 - 41791312
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcc 282  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  41791276 gaagcatatttgcagggactaaaaccatattttagcc 41791312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Complemental strand, 42695900 - 42695868
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    ||||||| |||||||||||||||||||||||||    
T  42695900 catatttgcagggaccaaaaccatattttagcc 42695868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 19198734 - 19198687
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||    
T  19198734 cctgcaaaatattttacttttgaaaatagtccctggagggactatttt 19198687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 39025233 - 39025280
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||    
T  39025233 cctgcaaaatattttacttttgaaaatagtccctggagggactatttt 39025280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 24510157 - 24510204
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||||||||||||||||||||||| |||||||  ||||||||    
T  24510157 cctgcaaaatattttacttttgaaaatagtccctggagagactatttt 24510204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 34002791 - 34002838
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||||||||||||||||||||||| | |||||| ||||||||    
T  34002791 cctgcaaaatattttacttttgaaaatagtccttggagggactatttt 34002838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 49073841 - 49073794
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||||||||||||||||||||||| |||| ||| ||||||||    
T  49073841 cctgcaaaatattttacttttgaaaatagtccctgaagggactatttt 49073794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 15211543 - 15211510
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||||||||||||||||||||||||||||||    
T  15211543 catatttacagggaccaaaaccatattttagcct 15211510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 246 - 283
Target Start/End: Original strand, 49074017 - 49074054
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||||||||| |||||||||||||||||||||||    
T  49074017 gaagcatatttacaaggaccaaaaccatattttagcct 49074054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 289
Target Start/End: Complemental strand, 31258372 - 31258332
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcctcaattt 289  Q
    |||||||||||||||| |||||||||||||||||| |||||    
T  31258372 gcatatttacagggactaaaaccatattttagccttaattt 31258332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 247 - 283
Target Start/End: Original strand, 42483236 - 42483272
Alignment:
Q  247 aagcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||||| ||||||||||||||||||||||||||    
T  42483236 aagcatatttgcagggaccaaaaccatattttagcct 42483272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 246 - 282
Target Start/End: Complemental strand, 45638616 - 45638580
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcc 282  Q
    ||||||||||| |||||||||||||||||||||||||    
T  45638616 gaagcatatttgcagggaccaaaaccatattttagcc 45638580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 12322820 - 12322867
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    ||||||||||||||||||||||||| |||| |||  ||||||||||||    
T  12322820 cctgcaaaatattttacttttgaaattagtccctccaggtactatttt 12322867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 12360818 - 12360865
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||||||||||||||||||||||| |||  ||| ||||||||    
T  12360818 cctgcaaaatattttacttttgaaaatagtccctccagggactatttt 12360865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 12360887 - 12360840
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||||||||  ||||||||||||| |||||||| ||||||||    
T  12360887 cctgcaaaatattttgtttttgaaaatagtccctggagggactatttt 12360840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 16060852 - 16060899
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcctcaatttaataaca 296  Q
    |||||||| |||||||||||||||||||||||||  |||| |||||||    
T  16060852 gcatatttgcagggaccaaaaccatattttagccaaaattaaataaca 16060899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 32035577 - 32035530
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||||||||||||||||||||||||| |  ||||| ||||||||    
T  32035577 cctgcaaaatattttacttttgaaaatagtcctaggagggactatttt 32035530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 33234762 - 33234809
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||| |||||||||||| |||||||||| |||||||| ||||||||    
T  33234762 cctgcataatattttacttctgaaaatagtccctggagggactatttt 33234809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 3753539 - 3753573
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||||||||||| ||||||||||||||||||    
T  3753539 gcatatttacagggactaaaaccatattttagcct 3753573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 133 - 167
Target Start/End: Original strand, 8364697 - 8364731
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctg 167  Q
    |||||||||||||||||||||||||||||| ||||    
T  8364697 cctgcaaaatattttacttttgaaaatagtccctg 8364731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 12360636 - 12360602
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  12360636 gcatatttgcagggaccaaaaccatattttagcct 12360602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 15516615 - 15516581
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  15516615 gcatatttgcagggaccaaaaccatattttagcct 15516581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 16026905 - 16026939
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  16026905 gcatatttgcagggaccaaaaccatattttagcct 16026939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 24507810 - 24507844
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  24507810 gcatatttgcagggaccaaaaccatattttagcct 24507844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 33045657 - 33045691
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  33045657 gcatatttgcagggaccaaaaccatattttagcct 33045691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 33234579 - 33234545
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  33234579 gcatatttgcagggaccaaaaccatattttagcct 33234545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 38164262 - 38164296
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  38164262 gcatatttgcagggaccaaaaccatattttagcct 38164296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 250 - 288
Target Start/End: Complemental strand, 45380304 - 45380266
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcctcaatt 288  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  45380304 catatttgcagggaccaaaaccatattttagcctaaatt 45380266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 246 - 280
Target Start/End: Complemental strand, 46183720 - 46183686
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttag 280  Q
    ||||||||||| |||||||||||||||||||||||    
T  46183720 gaagcatatttgcagggaccaaaaccatattttag 46183686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 47819265 - 47819231
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  47819265 gcatatttgcagggaccaaaaccatattttagcct 47819231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 47819563 - 47819597
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  47819563 gcatatttgcagggaccaaaaccatattttagcct 47819597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 3247230 - 3247197
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  3247230 catatttgcagggaccaaaaccatattttagcct 3247197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 7867325 - 7867358
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  7867325 catatttgcagggaccaaaaccatattttagcct 7867358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 8140466 - 8140433
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  8140466 catatttgcagggaccaaaaccatattttagcct 8140433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 10631496 - 10631529
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  10631496 catatttgcagggaccaaaaccatattttagcct 10631529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 10887265 - 10887232
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  10887265 catatttgcagggaccaaaaccatattttagcct 10887232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 10887566 - 10887599
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  10887566 catatttgcagggaccaaaaccatattttagcct 10887599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 12360936 - 12360969
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  12360936 catatttgcagggaccaaaaccatattttagcct 12360969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 162
Target Start/End: Complemental strand, 15211644 - 15211615
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagt 162  Q
    ||||||||||||||||||||||||||||||    
T  15211644 cctgcaaaatattttacttttgaaaatagt 15211615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 15526330 - 15526363
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  15526330 catatttgcagggaccaaaaccatattttagcct 15526363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 286
Target Start/End: Original strand, 18302354 - 18302391
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcctcaa 286  Q
    |||||||| ||||||| |||||||||||||||||||||    
T  18302354 gcatatttgcagggactaaaaccatattttagcctcaa 18302391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 19720744 - 19720711
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  19720744 catatttgcagggaccaaaaccatattttagcct 19720711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 24611144 - 24611177
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    |||||||||||||||||||| |||||||||||||    
T  24611144 catatttacagggaccaaaaacatattttagcct 24611177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 282
Target Start/End: Complemental strand, 24653835 - 24653802
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcc 282  Q
    |||||||| |||||||||||||||||||||||||    
T  24653835 gcatatttgcagggaccaaaaccatattttagcc 24653802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 24654135 - 24654168
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  24654135 catatttgcagggaccaaaaccatattttagcct 24654168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 29688152 - 29688197
Alignment:
Q  135 tgcaaaatattttacttttgaaaatagttcctggaggtactatttt 180  Q
    |||||||| ||||| ||||||||||||| |||||||| ||||||||    
T  29688152 tgcaaaattttttatttttgaaaatagtccctggagggactatttt 29688197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 30322961 - 30322928
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  30322961 catatttgcagggaccaaaaccatattttagcct 30322928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 32035756 - 32035789
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  32035756 catatttgcagggaccaaaaccatattttagcct 32035789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 282
Target Start/End: Complemental strand, 33000338 - 33000305
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcc 282  Q
    |||||||| |||||||||||||||||||||||||    
T  33000338 gcatatttgcagggaccaaaaccatattttagcc 33000305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 33000637 - 33000670
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  33000637 catatttgcagggaccaaaaccatattttagcct 33000670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 288
Target Start/End: Original strand, 35722313 - 35722350
Alignment:
Q  251 atatttacagggaccaaaaccatattttagcctcaatt 288  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  35722313 atatttacagggaccaaaaacatattttagcctaaatt 35722350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 36912885 - 36912852
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  36912885 catatttgcagggaccaaaaccatattttagcct 36912852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 282
Target Start/End: Original strand, 38151179 - 38151212
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcc 282  Q
    |||||||| |||||||||||||||||||||||||    
T  38151179 gcatatttgcagggaccaaaaccatattttagcc 38151212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 39747803 - 39747836
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  39747803 catatttgcagggaccaaaaccatattttagcct 39747836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 282
Target Start/End: Original strand, 40718441 - 40718474
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcc 282  Q
    |||||||| |||||||||||||||||||||||||    
T  40718441 gcatatttgcagggaccaaaaccatattttagcc 40718474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 282
Target Start/End: Complemental strand, 41738829 - 41738796
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcc 282  Q
    |||||||| |||||||||||||||||||||||||    
T  41738829 gcatatttgcagggaccaaaaccatattttagcc 41738796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 42483011 - 42482978
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  42483011 catatttgcagggaccaaaaccatattttagcct 42482978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 45638862 - 45638895
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  45638862 catatttgcagggaccaaaaccatattttagcct 45638895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 48588988 - 48589021
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    |||||||||||||||||||| |||||||||||||    
T  48588988 catatttacagggaccaaaaacatattttagcct 48589021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 48594075 - 48594108
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    |||||||||||||||||||| |||||||||||||    
T  48594075 catatttacagggaccaaaaacatattttagcct 48594108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 48598686 - 48598719
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    |||||||||||||||||||| |||||||||||||    
T  48598686 catatttacagggaccaaaaacatattttagcct 48598719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 134 - 162
Target Start/End: Original strand, 4789524 - 4789552
Alignment:
Q  134 ctgcaaaatattttacttttgaaaatagt 162  Q
    |||||||||||||||||||||||||||||    
T  4789524 ctgcaaaatattttacttttgaaaatagt 4789552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Complemental strand, 10631196 - 10631164
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    ||||||| |||||||||||||||||||||||||    
T  10631196 catatttgcagggaccaaaaccatattttagcc 10631164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Original strand, 12322938 - 12322970
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    ||||||| |||||||||||||||||||||||||    
T  12322938 catatttgcagggaccaaaaccatattttagcc 12322970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Original strand, 24510276 - 24510308
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    ||||||| |||||||||||||||||||||||||    
T  24510276 catatttgcagggaccaaaaccatattttagcc 24510308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Complemental strand, 24977810 - 24977778
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    ||||||| |||||||||||||||||||||||||    
T  24977810 catatttgcagggaccaaaaccatattttagcc 24977778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 246 - 282
Target Start/End: Complemental strand, 26191395 - 26191359
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcc 282  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  26191395 gaagcatatttgcagggactaaaaccatattttagcc 26191359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Complemental strand, 31060819 - 31060787
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    ||||||| |||||||||||||||||||||||||    
T  31060819 catatttgcagggaccaaaaccatattttagcc 31060787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Complemental strand, 35056562 - 35056530
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    ||||||| |||||||||||||||||||||||||    
T  35056562 catatttgcagggaccaaaaccatattttagcc 35056530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Complemental strand, 40718142 - 40718110
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    ||||||| |||||||||||||||||||||||||    
T  40718142 catatttgcagggaccaaaaccatattttagcc 40718110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 249 - 281
Target Start/End: Complemental strand, 44157728 - 44157696
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagc 281  Q
    |||||||| ||||||||||||||||||||||||    
T  44157728 gcatatttgcagggaccaaaaccatattttagc 44157696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000004; HSPs: 4)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 133 - 170
Target Start/End: Original strand, 223026 - 223063
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggag 170  Q
    ||||||||||||||||||||||||||||||||||||||    
T  223026 cctgcaaaatattttacttttgaaaatagttcctggag 223063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 48082 - 48123
Alignment:
Q  135 tgcaaaatattttacttttgaaaatagttcctggaggtacta 176  Q
    |||||||||||||||||||||||||||| |||||||| ||||    
T  48082 tgcaaaatattttacttttgaaaatagtccctggagggacta 48123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 47957 - 47924
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  47957 catatttgcagggaccaaaaccatattttagcct 47924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 223140 - 223173
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcct 283  Q
    ||||||| ||||||||||||||||||||||||||    
T  223140 catatttgcagggaccaaaaccatattttagcct 223173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 247 - 283
Target Start/End: Complemental strand, 3787 - 3751
Alignment:
Q  247 aagcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||||| ||||||||||||||||||||||||||    
T  3787 aagcatatttgcagggaccaaaaccatattttagcct 3751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 289
Target Start/End: Original strand, 75731 - 75771
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcctcaattt 289  Q
    |||||||| |||||||||||||||||||||||||| |||||    
T  75731 gcatatttgcagggaccaaaaccatattttagcctaaattt 75771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 176
Target Start/End: Original strand, 34802 - 34845
Alignment:
Q  133 cctgcaaaatattttacttttgaaaatagttcctggaggtacta 176  Q
    |||||||||||||||||||||||||||||||  |||||| ||||    
T  34802 cctgcaaaatattttacttttgaaaatagtttttggagggacta 34845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0684 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0684
Description:

Target: scaffold0684; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 2627 - 2661
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  2627 gcatatttgcagggaccaaaaccatattttagcct 2661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 82673 - 82707
Alignment:
Q  249 gcatatttacagggaccaaaaccatattttagcct 283  Q
    |||||||| ||||||||||||||||||||||||||    
T  82673 gcatatttgcagggaccaaaaccatattttagcct 82707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 30; Significance: 0.0000002; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 283
Target Start/End: Complemental strand, 2537 - 2500
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcct 283  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  2537 gaagcatatttgcagggatcaaaaccatattttagcct 2500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 134 - 162
Target Start/End: Original strand, 2718 - 2746
Alignment:
Q  134 ctgcaaaatattttacttttgaaaatagt 162  Q
    |||||||||||||||||||||||||||||    
T  2718 ctgcaaaatattttacttttgaaaatagt 2746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Original strand, 2851 - 2883
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    ||||||| |||||||||||||||||||||||||    
T  2851 catatttgcagggaccaaaaccatattttagcc 2883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 251 - 283
Target Start/End: Original strand, 30935 - 30967
Alignment:
Q  251 atatttacagggaccaaaaccatattttagcct 283  Q
    |||||| ||||||||||||||||||||||||||    
T  30935 atatttgcagggaccaaaaccatattttagcct 30967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 246 - 282
Target Start/End: Original strand, 44170 - 44206
Alignment:
Q  246 gaagcatatttacagggaccaaaaccatattttagcc 282  Q
    ||||||||||| ||||||||||| |||||||||||||    
T  44170 gaagcatatttgcagggaccaaagccatattttagcc 44206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 282
Target Start/End: Original strand, 148250 - 148282
Alignment:
Q  250 catatttacagggaccaaaaccatattttagcc 282  Q
    ||||||| |||||||||||||||||||||||||    
T  148250 catatttgcagggaccaaaaccatattttagcc 148282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University