View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12794_low_4 (Length: 312)

Name: NF12794_low_4
Description: NF12794
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12794_low_4
NF12794_low_4
[»] chr4 (32 HSPs)
chr4 (18-273)||(6209149-6209410)
chr4 (22-116)||(36729159-36729253)
chr4 (22-117)||(43793701-43793796)
chr4 (22-117)||(13826489-13826584)
chr4 (22-116)||(51291240-51291334)
chr4 (24-117)||(19232413-19232506)
chr4 (22-114)||(24626293-24626385)
chr4 (22-118)||(35475428-35475524)
chr4 (22-117)||(5304417-5304512)
chr4 (22-117)||(13397745-13397840)
chr4 (22-113)||(15058892-15058983)
chr4 (22-116)||(4098796-4098890)
chr4 (18-120)||(20919401-20919502)
chr4 (22-117)||(27018353-27018448)
chr4 (29-115)||(15795463-15795549)
chr4 (22-117)||(4357391-4357486)
chr4 (22-117)||(6789028-6789123)
chr4 (22-117)||(25011874-25011969)
chr4 (22-117)||(45633576-45633670)
chr4 (22-117)||(25618698-25618792)
chr4 (152-196)||(20919589-20919633)
chr4 (67-118)||(13394605-13394656)
chr4 (152-193)||(36729316-36729357)
chr4 (22-97)||(2715807-2715882)
chr4 (41-116)||(41877099-41877174)
chr4 (22-59)||(9195792-9195829)
chr4 (22-59)||(55780525-55780562)
chr4 (22-59)||(55844705-55844742)
chr4 (196-236)||(10620772-10620812)
chr4 (196-236)||(10677016-10677056)
chr4 (196-236)||(10890656-10890696)
chr4 (72-116)||(33621110-33621154)
[»] scaffold0002 (2 HSPs)
scaffold0002 (22-120)||(455166-455264)
scaffold0002 (155-199)||(454925-454969)
[»] chr5 (30 HSPs)
chr5 (22-118)||(38476539-38476634)
chr5 (19-118)||(2373281-2373380)
chr5 (22-117)||(40428709-40428804)
chr5 (22-117)||(16901067-16901162)
chr5 (22-117)||(18695142-18695237)
chr5 (22-117)||(25556945-25557040)
chr5 (22-118)||(34125199-34125295)
chr5 (22-117)||(245733-245828)
chr5 (22-117)||(31055384-31055479)
chr5 (22-120)||(37961315-37961413)
chr5 (22-117)||(16307546-16307641)
chr5 (22-120)||(17825564-17825662)
chr5 (22-117)||(10379420-10379515)
chr5 (22-117)||(26639107-26639202)
chr5 (22-117)||(38408767-38408861)
chr5 (29-120)||(41663590-41663681)
chr5 (22-59)||(23040076-23040113)
chr5 (22-113)||(10293161-10293252)
chr5 (152-190)||(17825755-17825793)
chr5 (152-198)||(20653817-20653863)
chr5 (152-197)||(23040297-23040342)
chr5 (22-116)||(36641282-36641376)
chr5 (152-196)||(31576620-31576664)
chr5 (74-117)||(31648175-31648218)
chr5 (26-118)||(35301984-35302075)
chr5 (155-198)||(38476741-38476784)
chr5 (152-195)||(41663783-41663826)
chr5 (152-198)||(2373144-2373190)
chr5 (79-117)||(8645946-8645984)
chr5 (22-58)||(462905-462941)
[»] chr1 (33 HSPs)
chr1 (22-116)||(16551714-16551808)
chr1 (22-117)||(19077995-19078090)
chr1 (22-117)||(19125885-19125980)
chr1 (22-117)||(4059592-4059687)
chr1 (22-117)||(24196400-24196495)
chr1 (22-117)||(43706724-43706819)
chr1 (22-120)||(4455109-4455207)
chr1 (22-117)||(3616938-3617033)
chr1 (22-117)||(46432286-46432381)
chr1 (22-117)||(48471933-48472028)
chr1 (22-120)||(29182067-29182165)
chr1 (24-120)||(2260445-2260541)
chr1 (22-118)||(18606753-18606848)
chr1 (26-117)||(2425367-2425458)
chr1 (22-118)||(9387833-9387931)
chr1 (22-117)||(24962092-24962187)
chr1 (22-117)||(27092922-27093017)
chr1 (153-197)||(21185206-21185250)
chr1 (22-120)||(21185343-21185440)
chr1 (22-117)||(2657583-2657677)
chr1 (22-117)||(9554271-9554366)
chr1 (22-117)||(24749937-24750032)
chr1 (22-116)||(28920727-28920822)
chr1 (67-120)||(21148131-21148184)
chr1 (29-118)||(16971997-16972086)
chr1 (22-116)||(22786169-22786260)
chr1 (22-118)||(29676218-29676314)
chr1 (152-194)||(2260635-2260677)
chr1 (22-117)||(47685240-47685335)
chr1 (22-116)||(31084683-31084777)
chr1 (22-54)||(10684933-10684965)
chr1 (154-200)||(11190380-11190426)
chr1 (196-237)||(27276998-27277039)
[»] chr7 (50 HSPs)
chr7 (22-120)||(9822167-9822264)
chr7 (22-120)||(10724092-10724189)
chr7 (22-118)||(5087135-5087231)
chr7 (22-118)||(6650649-6650745)
chr7 (26-120)||(3403118-3403212)
chr7 (22-120)||(15681769-15681867)
chr7 (24-118)||(36746572-36746666)
chr7 (22-118)||(26385400-26385496)
chr7 (22-118)||(39182073-39182169)
chr7 (22-117)||(41452319-41452414)
chr7 (22-117)||(48176033-48176128)
chr7 (24-117)||(10655470-10655563)
chr7 (22-117)||(19195283-19195378)
chr7 (22-117)||(20636758-20636852)
chr7 (22-117)||(21224422-21224517)
chr7 (22-117)||(31494049-31494144)
chr7 (22-118)||(42303286-42303381)
chr7 (22-118)||(27869264-27869360)
chr7 (22-117)||(7365362-7365457)
chr7 (22-117)||(33237484-33237578)
chr7 (22-117)||(35337592-35337687)
chr7 (22-118)||(5348166-5348263)
chr7 (22-118)||(17305903-17306000)
chr7 (74-117)||(11843248-11843291)
chr7 (74-117)||(13577856-13577899)
chr7 (22-118)||(25002846-25002942)
chr7 (22-118)||(42271471-42271567)
chr7 (22-113)||(2331152-2331243)
chr7 (22-117)||(3562503-3562598)
chr7 (22-117)||(19493458-19493552)
chr7 (22-117)||(24597586-24597680)
chr7 (22-117)||(26126393-26126488)
chr7 (22-117)||(10023855-10023949)
chr7 (26-108)||(39440199-39440281)
chr7 (22-118)||(24464715-24464811)
chr7 (22-55)||(5111578-5111611)
chr7 (22-115)||(44077942-44078036)
chr7 (78-118)||(15093820-15093860)
chr7 (22-54)||(29051757-29051789)
chr7 (22-52)||(4571478-4571508)
chr7 (22-55)||(6798014-6798047)
chr7 (155-196)||(9822330-9822371)
chr7 (155-196)||(10724255-10724296)
chr7 (78-115)||(24448114-24448151)
chr7 (69-117)||(8526981-8527029)
chr7 (78-118)||(9157098-9157138)
chr7 (22-54)||(9157183-9157215)
chr7 (196-236)||(18561726-18561766)
chr7 (196-236)||(24850998-24851038)
chr7 (196-236)||(29328512-29328552)
[»] chr2 (24 HSPs)
chr2 (24-117)||(28365651-28365744)
chr2 (22-117)||(15700886-15700981)
chr2 (22-117)||(15735203-15735298)
chr2 (22-117)||(30714344-30714439)
chr2 (22-117)||(38716332-38716427)
chr2 (22-118)||(9787698-9787794)
chr2 (22-117)||(18537898-18537993)
chr2 (22-117)||(22191185-22191279)
chr2 (38-118)||(4104893-4104973)
chr2 (24-116)||(25884248-25884340)
chr2 (22-117)||(2986825-2986920)
chr2 (22-117)||(11176046-11176141)
chr2 (22-117)||(17368355-17368450)
chr2 (26-117)||(25298871-25298962)
chr2 (25-118)||(21773401-21773493)
chr2 (22-118)||(36464412-36464507)
chr2 (22-117)||(6763787-6763882)
chr2 (67-113)||(22387141-22387187)
chr2 (22-117)||(9051098-9051192)
chr2 (22-116)||(26829160-26829254)
chr2 (152-196)||(26829346-26829390)
chr2 (196-237)||(36270887-36270928)
chr2 (152-200)||(28365507-28365555)
chr2 (196-236)||(41662000-41662040)
[»] scaffold0291 (1 HSPs)
scaffold0291 (23-119)||(10061-10157)
[»] chr6 (34 HSPs)
chr6 (22-118)||(34528287-34528383)
chr6 (22-118)||(32451865-32451961)
chr6 (22-117)||(14572248-14572343)
chr6 (22-113)||(23124794-23124885)
chr6 (22-117)||(35102561-35102656)
chr6 (22-116)||(25819823-25819917)
chr6 (22-120)||(26240096-26240194)
chr6 (22-117)||(20863798-20863893)
chr6 (22-117)||(24051147-24051242)
chr6 (22-117)||(31210933-31211028)
chr6 (22-104)||(19282296-19282376)
chr6 (22-118)||(2636916-2637013)
chr6 (22-118)||(4597474-4597570)
chr6 (22-118)||(24603500-24603596)
chr6 (30-117)||(2058904-2058991)
chr6 (22-117)||(12291487-12291582)
chr6 (22-116)||(16415403-16415495)
chr6 (22-117)||(18791496-18791591)
chr6 (22-113)||(22269545-22269636)
chr6 (22-120)||(3118818-3118916)
chr6 (67-116)||(24615764-24615813)
chr6 (67-118)||(4371076-4371127)
chr6 (22-113)||(9241791-9241882)
chr6 (39-118)||(12427389-12427468)
chr6 (152-202)||(16415591-16415641)
chr6 (22-117)||(18749166-18749261)
chr6 (26-118)||(22968225-22968316)
chr6 (26-118)||(23820077-23820168)
chr6 (22-117)||(26710378-26710472)
chr6 (67-117)||(34834109-34834159)
chr6 (22-55)||(4013798-4013831)
chr6 (22-59)||(8412897-8412934)
chr6 (196-237)||(28755685-28755726)
chr6 (196-236)||(16558911-16558951)
[»] scaffold0607 (1 HSPs)
scaffold0607 (22-117)||(2119-2214)
[»] scaffold0174 (1 HSPs)
scaffold0174 (22-117)||(29855-29950)
[»] chr8 (26 HSPs)
chr8 (22-113)||(18252960-18253051)
chr8 (22-118)||(3208119-3208214)
chr8 (22-117)||(8802470-8802565)
chr8 (22-117)||(19391457-19391552)
chr8 (22-117)||(38630194-38630289)
chr8 (24-118)||(7117183-7117277)
chr8 (22-116)||(19924404-19924498)
chr8 (22-118)||(23565228-23565324)
chr8 (22-117)||(5192341-5192436)
chr8 (22-117)||(18881573-18881668)
chr8 (28-118)||(1824750-1824839)
chr8 (28-118)||(1859195-1859284)
chr8 (67-116)||(22452244-22452293)
chr8 (22-95)||(41688202-41688275)
chr8 (22-118)||(4423099-4423194)
chr8 (67-118)||(31268463-31268514)
chr8 (22-117)||(4518938-4519032)
chr8 (22-113)||(17648382-17648473)
chr8 (67-117)||(21929917-21929967)
chr8 (32-116)||(15869408-15869493)
chr8 (22-117)||(4807670-4807765)
chr8 (22-117)||(12723331-12723426)
chr8 (75-117)||(21666344-21666386)
chr8 (68-117)||(33895558-33895607)
chr8 (22-58)||(17857061-17857097)
chr8 (155-196)||(3207982-3208023)
[»] chr3 (40 HSPs)
chr3 (28-120)||(23320506-23320597)
chr3 (22-117)||(26628095-26628190)
chr3 (22-117)||(3328883-3328978)
chr3 (22-117)||(13081033-13081128)
chr3 (22-117)||(48907362-48907457)
chr3 (22-115)||(23428691-23428784)
chr3 (24-117)||(36311292-36311385)
chr3 (22-118)||(22416473-22416569)
chr3 (22-117)||(4522093-4522188)
chr3 (22-117)||(6927609-6927704)
chr3 (22-117)||(8339010-8339105)
chr3 (26-117)||(25022733-25022824)
chr3 (22-117)||(28154952-28155047)
chr3 (22-117)||(28173799-28173894)
chr3 (22-117)||(1743388-1743483)
chr3 (22-117)||(10743546-10743641)
chr3 (21-116)||(31039048-31039143)
chr3 (22-117)||(32960713-32960807)
chr3 (22-118)||(30155214-30155310)
chr3 (22-118)||(32315059-32315154)
chr3 (39-115)||(40836250-40836326)
chr3 (22-117)||(46673117-46673213)
chr3 (22-117)||(8542749-8542844)
chr3 (22-104)||(3821021-3821103)
chr3 (22-117)||(27852822-27852916)
chr3 (38-96)||(43668583-43668641)
chr3 (25-117)||(20001851-20001943)
chr3 (22-117)||(25179717-25179810)
chr3 (29-117)||(26177026-26177114)
chr3 (29-120)||(20626789-20626880)
chr3 (69-117)||(33279655-33279703)
chr3 (25-117)||(26126976-26127068)
chr3 (155-197)||(31039253-31039295)
chr3 (67-117)||(33105125-33105175)
chr3 (67-117)||(34878599-34878649)
chr3 (22-104)||(3781017-3781099)
chr3 (196-233)||(9250146-9250183)
chr3 (196-237)||(17197193-17197234)
chr3 (68-117)||(22500665-22500714)
chr3 (196-236)||(17137081-17137121)
[»] scaffold1875 (1 HSPs)
scaffold1875 (22-117)||(826-921)
[»] scaffold0171 (1 HSPs)
scaffold0171 (22-120)||(9171-9270)
[»] scaffold0062 (2 HSPs)
scaffold0062 (22-117)||(49798-49893)
scaffold0062 (22-117)||(62337-62432)
[»] scaffold0025 (2 HSPs)
scaffold0025 (22-117)||(19421-19516)
scaffold0025 (67-117)||(62000-62050)
[»] scaffold0014 (1 HSPs)
scaffold0014 (22-120)||(112266-112364)
[»] scaffold0406 (1 HSPs)
scaffold0406 (22-117)||(2130-2225)
[»] scaffold0060 (1 HSPs)
scaffold0060 (22-117)||(66313-66408)
[»] scaffold0103 (1 HSPs)
scaffold0103 (22-118)||(2996-3093)
[»] scaffold0150 (1 HSPs)
scaffold0150 (22-117)||(5971-6065)
[»] scaffold0087 (1 HSPs)
scaffold0087 (67-117)||(25034-25084)
[»] scaffold0001 (1 HSPs)
scaffold0001 (22-117)||(142017-142112)
[»] scaffold0179 (1 HSPs)
scaffold0179 (22-117)||(5720-5814)
[»] scaffold0419 (1 HSPs)
scaffold0419 (67-117)||(3030-3080)
[»] scaffold0007 (1 HSPs)
scaffold0007 (22-117)||(250588-250683)
[»] scaffold0683 (1 HSPs)
scaffold0683 (78-117)||(5191-5230)
[»] scaffold0187 (1 HSPs)
scaffold0187 (71-117)||(4934-4981)
[»] scaffold1202 (1 HSPs)
scaffold1202 (22-59)||(1902-1939)
[»] scaffold0390 (1 HSPs)
scaffold0390 (196-236)||(13389-13429)
[»] scaffold0063 (1 HSPs)
scaffold0063 (196-236)||(6250-6290)


Alignment Details
Target: chr4 (Bit Score: 143; Significance: 4e-75; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 18 - 273
Target Start/End: Complemental strand, 6209410 - 6209149
Alignment:
Q  18 cttatgaccccttatcttctcaaaaagttgcgattatgacc--cnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaat 115  Q
    ||||||||||||||||||||||||||||||| | |||| ||  |       |||||| |||| ||||||||||||||||||| |||||||||||||||||    
T  6209410 cttatgaccccttatcttctcaaaaagttgcaactatggccacctttttttgggacacgtggtgtcttctcagcaattttggaacgaaaggggccaaaat 6209311  T
Q  116 tgtaannnnnnna---aaactatggg-tgaaaataagtattcgcaactttttaaaacttatgggatgaaaaatgcactttagcctaatattaaatgtgta 211  Q
    |||||       |   |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||     
T  6209310 tgtaaaaaaaaaattaaaactatggggtgaaaataagtattcgcaactttttaaaacttatgggatgaaaaatacactttagcctaatattaaatgtgtg 6209211  T
Q  212 atttgatattattgtcaacgttacgaaatcttattatataacacctcaaattcctaaataca 273  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||    
T  6209210 atttgatattattgtcaacgttaagaaatcttatgatataacacctcaaattactaaataca 6209149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 36729253 - 36729159
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaatt 116  Q
    ||||||||||||||||||||||||| |||||||||||        |||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  36729253 tgaccccttatcttctcaaaaagtttcgattatgaccttttttttgggacatgtggcgtcttctcagtaattttgggatgaaaggggccaaaatt 36729159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 43793796 - 43793701
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||| ||  ||||||||||||| ||||||||       |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  43793796 tgaccccttatatttacaaaaagttgcgaatatgaccccttttttgggacatgtggcgtcttctcagcaattttgggacgaaatgggccaaaattg 43793701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 13826584 - 13826489
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||||||||||||||  |||       |||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  13826584 tgaccccttatctttacaaaaagttgcgattatagccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaattg 13826489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 51291334 - 51291240
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaatt 116  Q
    |||||||||||||||||||||||||| ||||||| |||       ||||||||||||||||||||| |||||||| ||||||| |||| ||||||    
T  51291334 tgaccccttatcttctcaaaaagttgtgattatggccccttttttgggacatgtggcgtcttctcaccaattttgtgacgaaatgggcaaaaatt 51291240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 19232506 - 19232413
Alignment:
Q  24 accccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||  ||||||||||||||||||||||       |||||| ||||| |||||| ||||||||||||| |||||||||||||||||    
T  19232506 accccttatctttacaaaaagttgcgattatgaccccttttctgggacacgtggcatcttctgagcaattttgggatgaaaggggccaaaattg 19232413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 114
Target Start/End: Complemental strand, 24626385 - 24626293
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaa 114  Q
    |||| ||||||||||||||||||||| |||||||||||       ||||||||||| ||||||| | ||||||||||||||| ||||||||||    
T  24626385 tgactccttatcttctcaaaaagttgtgattatgacccatgttttgggacatgtggtgtcttcttaacaattttgggacgaatggggccaaaa 24626293  T

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Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 35475428 - 35475524
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    ||||||||||||||  |||||||| |||||||||||||       |||||| |||||||||||||||||||||| ||| |||| |||||||||||||    
T  35475428 tgaccccttatctttacaaaaagtagcgattatgaccccttttttgggacacgtggcgtcttctcagcaattttaggatgaaatgggccaaaattgt 35475524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 5304512 - 5304417
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||||||||||||||| |||       |||||| ||||||||||||||||||||||| || ||| |||||||||||||    
T  5304512 tgaccccttatctttacaaaaagttgcgattatggcccattttttgggacacgtggcgtcttctcagcaattttgcgatgaagggggccaaaattg 5304417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 13397840 - 13397745
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||||||||||||||| |||       |||||| |||||||||||||||||||||| ||| ||| |||||||||||||    
T  13397840 tgaccccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcagcaattttcggatgaagggggccaaaattg 13397745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 113
Target Start/End: Complemental strand, 15058983 - 15058892
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaa 113  Q
    ||||||||||||||  |||||||||||||||||  |||       |||||| |||||||||||||||||||||||||| |||||||||||||    
T  15058983 tgaccccttatctttacaaaaagttgcgattatagccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaa 15058892  T

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Target: chr4; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 4098796 - 4098890
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaatt 116  Q
    ||||||||||||||||||||||||||| |||| | |||       |||||| |||||||||||||  ||||||||||||||||||||||| ||||    
T  4098796 tgaccccttatcttctcaaaaagttgcaattaaggccccttttttgggacacgtggcgtcttctcgtcaattttgggacgaaaggggccataatt 4098890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 20919502 - 20919401
Alignment:
Q  18 cttatgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    |||| |||||||||||||||||||| |||| |||||||| ||       |||||||||| |||||||||||||||||||||||||||   ||||||||||    
T  20919502 cttaggaccccttatcttctcaaaa-gttgtgattatgatccctcttttgggacatgtgacgtcttctcagcaattttgggacgaaactagccaaaattg 20919404  T
Q  118 taa 120  Q
    |||    
T  20919403 taa 20919401  T

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Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 27018353 - 27018448
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    |||||||||||| |  ||||||||||| |||||| |||       |||||| |||||||||||||||||||||||||| |||| ||||||||||||    
T  27018353 tgaccccttatccttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaatgggccaaaattg 27018448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 29 - 115
Target Start/End: Original strand, 15795463 - 15795549
Alignment:
Q  29 ttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaat 115  Q
    ||||||| ||||||||||| |||||||||||        |||||||||||||||||||| ||||||||||||||||| ||| |||||    
T  15795463 ttatcttttcaaaaagttgggattatgacccattttttaggacatgtggcgtcttctcatcaattttgggacgaaagaggctaaaat 15795549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 4357391 - 4357486
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||||||||||||||| |||       ||||||  ||||||||||||||||||||| | | ||| |||||||||||||    
T  4357391 tgaccccttatctttacaaaaagttgcgattatggccctttttttgggacacctggcgtcttctcagcaattttagaatgaagggggccaaaattg 4357486  T

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Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 6789123 - 6789028
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    |||||| |||||||  |||||| ||||||||||| |||       |||||| |||||||||||| ||||||||||||| ||| |||||||||||||    
T  6789123 tgacccgttatctttacaaaaaattgcgattatgcccctttttttgggacacgtggcgtcttcttagcaattttgggatgaagggggccaaaattg 6789028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 25011874 - 25011969
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||||||| |||||||| ||       |||||| ||||| |||||| ||||||||||| | |||||||||||||||||    
T  25011874 tgaccccttatctttacaaaaagttgggattatgatcccttttttgggacacgtggcatcttctgagcaattttggaatgaaaggggccaaaattg 25011969  T

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Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 45633576 - 45633670
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    |||||||||||||| | ||||||||| |||||||||||        ||||| ||||||| |||||| |||||||||||| ||||||||||||||||    
T  45633576 tgaccccttatcttttaaaaaagttgtgattatgaccctttttttaggacacgtggcgt-ttctcaacaattttgggacaaaaggggccaaaattg 45633670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 25618792 - 25618698
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||||| ||||||||| |||       |||||| |||||||||||||||||||||| ||| ||||||| |||||||||    
T  25618792 tgaccccttatctttacaaaaagtggcgattatggccccttttt-gggacacgtggcgtcttctcagcaatttttggatgaaagggaccaaaattg 25618698  T

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Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 20919589 - 20919633
Alignment:
Q  152 tcgcaactttttaaaacttatgggatgaaaaatgcactttagcct 196  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||    
T  20919589 tcgcaactttttaaaacttaaggggtgaaaaatgcactttagcct 20919633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 118
Target Start/End: Complemental strand, 13394656 - 13394605
Alignment:
Q  67 gggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    |||||| |||||||||||||||||||||| ||| ||| ||||||||||||||    
T  13394656 gggacacgtggcgtcttctcagcaattttcggatgaagggggccaaaattgt 13394605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 36729316 - 36729357
Alignment:
Q  152 tcgcaactttttaaaacttatgggatgaaaaatgcactttag 193  Q
    |||||||||||||||||||| ||| |||||||||||||||||    
T  36729316 tcgcaactttttaaaacttaaggggtgaaaaatgcactttag 36729357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 2715882 - 2715807
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgg 97  Q
    ||||||||||||||  |||||||||||||||||| |||       |||||| |||||||||||||| | |||||||    
T  2715882 tgaccccttatctttacaaaaagttgcgattatggcccattttttgggacacgtggcgtcttctcatccattttgg 2715807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 116
Target Start/End: Complemental strand, 41877174 - 41877099
Alignment:
Q  41 aaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaatt 116  Q
    |||||||||||||||||||        ||||| |||||||||| |||||||||||  || ||||||||||||||||    
T  41877174 aaagttgcgattatgaccccttttttaggacacgtggcgtcttttcagcaattttttgatgaaaggggccaaaatt 41877099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 9195829 - 9195792
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgaccc 59  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  9195829 tgaccccttatctttacaaaaagttgcgattatgaccc 9195792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 55780525 - 55780562
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgaccc 59  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  55780525 tgaccccttatctttacaaaaagttgcgattatgaccc 55780562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 55844705 - 55844742
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgaccc 59  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  55844705 tgaccccttatctttacaaaaagttgcgattatgaccc 55844742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 10620812 - 10620772
Alignment:
Q  196 taatattaaatgtgtaatttgatattattgtcaacgttacg 236  Q
    ||||||||||| ||| |||| ||||||||||||||||||||    
T  10620812 taatattaaatatgtgatttaatattattgtcaacgttacg 10620772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 10677056 - 10677016
Alignment:
Q  196 taatattaaatgtgtaatttgatattattgtcaacgttacg 236  Q
    ||||||||||| ||| |||| ||||||||||||||||||||    
T  10677056 taatattaaatatgtgatttaatattattgtcaacgttacg 10677016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 10890696 - 10890656
Alignment:
Q  196 taatattaaatgtgtaatttgatattattgtcaacgttacg 236  Q
    ||||||||||| ||| |||| ||||||||||||||||||||    
T  10890696 taatattaaatatgtgatttaatattattgtcaacgttacg 10890656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 116
Target Start/End: Complemental strand, 33621154 - 33621110
Alignment:
Q  72 atgtggcgtcttctcagcaattttgggacgaaaggggccaaaatt 116  Q
    |||||||||||||||| ||||||||| | |||| |||||||||||    
T  33621154 atgtggcgtcttctcatcaattttggaatgaaacgggccaaaatt 33621110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 22 - 120
Target Start/End: Original strand, 455166 - 455264
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgtaa 120  Q
    ||||||||||||||||| ||||||||||||||||||||       ||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  455166 tgaccccttatcttctctaaaagttgcgattatgacccattttttgggacatgtggcgtcttctcagcaattttgggatgaaaggggccgaaattgtaa 455264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 454969 - 454925
Alignment:
Q  155 caactttttaaaacttatgggatgaaaaatgcactttagcctaat 199  Q
    |||||||||||||||||  || |||||| ||||||||||||||||    
T  454969 caactttttaaaacttaatgggtgaaaagtgcactttagcctaat 454925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 118
Target Start/End: Complemental strand, 38476634 - 38476539
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    ||||||||||||||||||||||||||||||||||||||       |||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  38476634 tgaccccttatcttctcaaaaagttgcgattatgaccctttttt-gggacacgtggcgtcttctcagcaattttgggacgaaatgggccaaaattgt 38476539  T

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Target: chr5; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 2373281 - 2373380
Alignment:
Q  19 ttatgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    |||||||||||||| |||||||||| |||||||||||||||       |||||| |||||||||||| |||||||||||||||| |||||||||||||||    
T  2373281 ttatgaccccttattttctcaaaaatttgcgattatgacccctttttggggacacgtggcgtcttcttagcaattttgggacgacaggggccaaaattgt 2373380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 40428804 - 40428709
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||| |||||||||||||||       |||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  40428804 tgaccccttatctttacaaaaaattgcgattatgaccccttttttgggacacgtggcgtcttctcagcaattttgggacgaagggggccaaaattg 40428709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 16901162 - 16901067
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||||||||||||||| |||       |||||| |||||||||||||||||||||||||| |||| ||||||||||||    
T  16901162 tgaccccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaatgggccaaaattg 16901067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 18695142 - 18695237
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||||||||||||||| |||       |||||| ||||||||||||||||||||||| || |||||||||||||||||    
T  18695142 tgaccccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcagcaattttgagatgaaaggggccaaaattg 18695237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 25557040 - 25556945
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  ||||||||||| |||||| |||       |||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  25557040 tgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaattg 25556945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 34125199 - 34125295
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    ||||| ||||||||||||||||||||||||||||||||       || ||| ||||||| ||||||| |||||||||| ||| ||||||||||||||    
T  34125199 tgacctcttatcttctcaaaaagttgcgattatgacccatgttttggaacacgtggcgtattctcagtaattttgggatgaagggggccaaaattgt 34125295  T

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Target: chr5; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 245733 - 245828
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||||||||||||||| |||       |||||| |||||||||||||||||||||| ||| ||| |||||||||||||    
T  245733 tgaccccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcagcaattttcggatgaagggggccaaaattg 245828  T

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Target: chr5; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 31055479 - 31055384
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||| |||||||||||||||       |||||| ||||| |||||| ||||||||||||| |||||||||||||||||    
T  31055479 tgaccccttatctttacaaaaaattgcgattatgaccccttttctgggacacgtggcatcttctgagcaattttgggatgaaaggggccaaaattg 31055384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 120
Target Start/End: Complemental strand, 37961413 - 37961315
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgtaa 120  Q
    |||||||||| |||||||||||||||| |||||| |||       |||||| |||| ||||||||||||||||||||| ||||||| |||| |||||||    
T  37961413 tgaccccttaacttctcaaaaagttgcaattatggccccttttaagggacacgtggtgtcttctcagcaattttgggatgaaagggaccaagattgtaa 37961315  T

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Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 16307641 - 16307546
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    |||| |||||||||  ||||||||||| ||||||||||        ||||||||||||||||||||||||||||  || |||||||||||||||||    
T  16307641 tgactccttatctttacaaaaagttgcaattatgacccctttttttggacatgtggcgtcttctcagcaattttaagatgaaaggggccaaaattg 16307546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 22 - 120
Target Start/End: Complemental strand, 17825662 - 17825564
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgtaa 120  Q
    |||||| ||||||| ||||||||||||||||||| |||       |||||| |||||||||||| |  ||||||| || ||||||||||||||||||||    
T  17825662 tgaccctttatcttgtcaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctaaaaaattttgagatgaaaggggccaaaattgtaa 17825564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 10379420 - 10379515
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  ||||||||||||||||||||||       | |||| ||||| |||||| || |||||||||| ||||||| |||||||||    
T  10379420 tgaccccttatctttacaaaaagttgcgattatgaccccttttctgagacaagtggcatcttctgagaaattttgggatgaaagggaccaaaattg 10379515  T

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Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 26639202 - 26639107
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  ||||||||||| |||||| ||        |||||| |||||||||||||| ||||||||||| ||| |||||||||||||    
T  26639202 tgaccccttatctttacaaaaagttgcaattatggcctcttttttgggacacgtggcgtcttctcaacaattttgggatgaagggggccaaaattg 26639107  T

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Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 38408767 - 38408861
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  ||||||||||| ||||||||||       |||||| ||||| |||||| ||||||||||||| |||| ||||||||||||    
T  38408767 tgaccccttatctttacaaaaagttgctattatgacccattttctgggacacgtggcatcttctgagcaattttgggatgaaa-gggccaaaattg 38408861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 41663681 - 41663590
Alignment:
Q  29 ttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgtaa 120  Q
    |||| |||||||||| ||||||||||| |||       |||||| ||||| |||||| |||||||||||||||||| ||| |||||||||||    
T  41663681 ttattttctcaaaaaattgcgattatggccccttttttgggacacgtggcatcttcttagcaattttgggacgaaatgggtcaaaattgtaa 41663590  T

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Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 23040113 - 23040076
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgaccc 59  Q
    ||||||||||||||||||||||||||||||||||||||    
T  23040113 tgaccccttatcttctcaaaaagttgcgattatgaccc 23040076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 113
Target Start/End: Complemental strand, 10293252 - 10293161
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaa 113  Q
    |||| |||||||||  |||||||||||||||||||||          |||||||||||||||||||||| |||| |||||||| ||||||||    
T  10293252 tgactccttatctttccaaaaagttgcgattatgacctcttttttaagacatgtggcgtcttctcagcatttttaggacgaaatgggccaaa 10293161  T

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Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 190
Target Start/End: Original strand, 17825755 - 17825793
Alignment:
Q  152 tcgcaactttttaaaacttatgggatgaaaaatgcactt 190  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  17825755 tcgcaactttttaaaacttatgggatgaaaagtgcactt 17825793  T

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Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 20653863 - 20653817
Alignment:
Q  152 tcgcaactttttaaaacttatgggatgaaaaatgcactttagcctaa 198  Q
    |||||||||||||||||||| | |||||||| |||||||||||||||    
T  20653863 tcgcaactttttaaaacttaagagatgaaaagtgcactttagcctaa 20653817  T

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Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 23040297 - 23040342
Alignment:
Q  152 tcgcaactttttaaaacttatgggatgaaaaatgcactttagccta 197  Q
    |||||||||||||||||||| |||||||||| || |||||||||||    
T  23040297 tcgcaactttttaaaacttaagggatgaaaagtgtactttagccta 23040342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 36641282 - 36641376
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaatt 116  Q
    |||||| |||||||   |||||||||||||||||| ||       ||||||  |||||||||||||||||||||  || ||||||||||||||||    
T  36641282 tgacccgttatctttataaaaagttgcgattatgatcccttttttgggacacatggcgtcttctcagcaattttttgatgaaaggggccaaaatt 36641376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 31576620 - 31576664
Alignment:
Q  152 tcgcaactttttaaaacttatgggatgaaaaatgcactttagcct 196  Q
    |||||||||||||||||||| ||| |||||| |||||||||||||    
T  31576620 tcgcaactttttaaaacttaaggggtgaaaagtgcactttagcct 31576664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 74 - 117
Target Start/End: Original strand, 31648175 - 31648218
Alignment:
Q  74 gtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||||| |||||||| |||||||| ||||||||    
T  31648175 gtggcgtcttctcagcagttttgggatgaaaggggtcaaaattg 31648218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 118
Target Start/End: Complemental strand, 35302075 - 35301984
Alignment:
Q  26 cccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    |||||||||||| |||||| |||||||||| |||       |||||| ||||||||| |||| ||| |||||||| || ||||||||||||||    
T  35302075 cccttatcttctaaaaaagctgcgattatggcccctgttctgggacacgtggcgtctgctcaacaa-tttgggacaaagggggccaaaattgt 35301984  T

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Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 155 - 198
Target Start/End: Original strand, 38476741 - 38476784
Alignment:
Q  155 caactttttaaaacttatgggatgaaaaatgcactttagcctaa 198  Q
    ||||||||||||||||| ||| |||||| |||||||||||||||    
T  38476741 caactttttaaaacttaaggggtgaaaagtgcactttagcctaa 38476784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 152 - 195
Target Start/End: Original strand, 41663783 - 41663826
Alignment:
Q  152 tcgcaactttttaaaacttatgggatgaaaaatgcactttagcc 195  Q
    ||||||||||||||||||||  || |||||||||||||||||||    
T  41663783 tcgcaactttttaaaacttaaagggtgaaaaatgcactttagcc 41663826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 2373190 - 2373144
Alignment:
Q  152 tcgcaactttttaaaacttatgggatgaaaaatgcactttagcctaa 198  Q
    |||||||||||||||||||| ||| |||||| |||||||||| ||||    
T  2373190 tcgcaactttttaaaacttaaggggtgaaaagtgcactttagtctaa 2373144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 117
Target Start/End: Original strand, 8645946 - 8645984
Alignment:
Q  79 gtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||| ||||||||||| |||||||||||||||||    
T  8645946 gtcttctcaacaattttgggatgaaaggggccaaaattg 8645984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 462905 - 462941
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacc 58  Q
    ||||||||||||||  |||||||||||||||||||||    
T  462905 tgaccccttatctttacaaaaagttgcgattatgacc 462941  T

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Target: chr1 (Bit Score: 62; Significance: 9e-27; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 16551808 - 16551714
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaatt 116  Q
    |||||||||||||||||||||||||||||||||| |||       |||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  16551808 tgaccccttatcttctcaaaaagttgcgattatggcccttgttttgggacacgtggcgtcttctcagcaattttgggacgaaaggtgccaaaatt 16551714  T

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Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 19078090 - 19077995
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  ||||||||||||||||||||||       |||||| |||||||||||||||||||||| ||| |||||||||||||||||    
T  19078090 tgaccccttatctttacaaaaagttgcgattatgaccccttttttgggacacgtggcgtcttctcagcaatttttggatgaaaggggccaaaattg 19077995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 19125980 - 19125885
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  ||||||||||||||||||||||       |||||| |||||||||||||||||||||| ||| |||||||||||||||||    
T  19125980 tgaccccttatctttacaaaaagttgcgattatgaccccttttttgggacacgtggcgtcttctcagcaatttttggatgaaaggggccaaaattg 19125885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 4059687 - 4059592
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  ||||||||||||||||||  ||       |||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  4059687 tgaccccttatctttacaaaaagttgcgattatggtccattttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaattg 4059592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 24196400 - 24196495
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  ||||||||||||| |||| |||       |||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  24196400 tgaccccttatctttacaaaaagttgcgaatatggccccttttttgggacacgtggcgtcttctcagcaatttttggacgaaaggggccaaaattg 24196495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 43706819 - 43706724
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  ||||||||||||||||||||||       |||||| ||||| |||||| ||||||||||||| |||||||||||||||||    
T  43706819 tgaccccttatctttacaaaaagttgcgattatgaccccttttccgggacacgtggcatcttctgagcaattttgggatgaaaggggccaaaattg 43706724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 120
Target Start/End: Complemental strand, 4455207 - 4455109
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgtaa 120  Q
    ||||| |||||||||||||||||||||||||||| ||        |||||||||||| |||||||||||||||||||||||||  | ||||||||||||    
T  4455207 tgaccacttatcttctcaaaaagttgcgattatggccatttttttgggacatgtggcatcttctcagcaattttgggacgaaaaagaccaaaattgtaa 4455109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 3616938 - 3617033
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||||||||||||||| |||       |||||| |||||||||||||||||||||| |||  ||||||||||||||||    
T  3616938 tgaccccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcagcaatttttggataaaaggggccaaaattg 3617033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 46432381 - 46432286
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  ||||||||||||||||||||||       |||||| ||||| |||||  ||||||||||||| |||||||||||||||||    
T  46432381 tgaccccttatctttacaaaaagttgcgattatgaccccttttctgggacacgtggcatcttccgagcaattttgggatgaaaggggccaaaattg 46432286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 48472028 - 48471933
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  ||||||||||||||||||  ||       |||||| |||||||||||||||||||||||||| ||| |||||||||||||    
T  48472028 tgaccccttatctttacaaaaagttgcgattatggtcccttttttgggacacgtggcgtcttctcagcaattttgggatgaagggggccaaaattg 48471933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 120
Target Start/End: Complemental strand, 29182165 - 29182067
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgtaa 120  Q
    |||||||||||||||||| ||||||||||||||| |||       | |||| || |||||||||||||||||||| |||||||| ||||||||| ||||    
T  29182165 tgaccccttatcttctcataaagttgcgattatggcccattttttgagacacgttgcgtcttctcagcaattttgagacgaaagaggccaaaatagtaa 29182067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 120
Target Start/End: Complemental strand, 2260541 - 2260445
Alignment:
Q  24 accccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgtaa 120  Q
    ||||||||||||||||||||||||||||| ||||||       |||| | ||||||||||||||| |||||| | |||||| || ||||||||||||    
T  2260541 accccttatcttctcaaaaagttgcgattctgaccccttttttgggatacgtggcgtcttctcagtaattttagaacgaaatggaccaaaattgtaa 2260445  T

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Target: chr1; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 118
Target Start/End: Complemental strand, 18606848 - 18606753
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    |||||||||||||||||||||||||| |||||| ||||       |||||| || |||||| |||||||| || |||||||||||||||||||||||    
T  18606848 tgaccccttatcttctcaaaaagttgtgattatcacccttgttttgggacacgtagcgtctgctcagcaa-ttcgggacgaaaggggccaaaattgt 18606753  T

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Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 2425367 - 2425458
Alignment:
Q  26 cccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||  ||||||||||||||||||||||       |||||| ||||| |||||| ||||||||||||| |||| ||||||||||||    
T  2425367 cccttatctttacaaaaagttgcgattatgacccattttctgggacacgtggcatcttctgagcaattttgggatgaaatgggccaaaattg 2425458  T

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Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 9387833 - 9387931
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtct--tctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    |||||| ||||||||||||||| ||||||||||||| |       ||||||||||||||||  ||||| ||||||||||||||||||  ||||||||||    
T  9387833 tgaccctttatcttctcaaaaatttgcgattatgacacctgttttgggacatgtggcgtctcttctcatcaattttgggacgaaaggaaccaaaattgt 9387931  T

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Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 24962092 - 24962187
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||||||||||||||| |||       |||||| ||||||||||||||||||||||  || ||||||| |||||||||    
T  24962092 tgaccccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcagcaattttttgatgaaagggaccaaaattg 24962187  T

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Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 27093017 - 27092922
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  ||||||||||| |||||| |||       || ||| |||||||||||||||||||||||||| |||| ||||||||||||    
T  27093017 tgaccccttatctttacaaaaagttgcaattatggccccttttttggaacacgtggcgtcttctcagcaattttgggatgaaatgggccaaaattg 27092922  T

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Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 21185250 - 21185206
Alignment:
Q  153 cgcaactttttaaaacttatgggatgaaaaatgcactttagccta 197  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  21185250 cgcaactttttaaaacttaagggatgaaaaatgcactttagccta 21185206  T

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Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 120
Target Start/End: Original strand, 21185343 - 21185440
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgtaa 120  Q
    ||||||| ||||||||||||||||||||||||||||||       || ||| | |||| |||||||||||||||| | | |||||||||||||||||||    
T  21185343 tgaccccctatcttctcaaaaagttgcgattatgaccc-ttttttggaacacgaggcggcttctcagcaattttgagccaaaaggggccaaaattgtaa 21185440  T

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Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 2657677 - 2657583
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    |||||||||||||| | ||||||||| |||||||||||        ||||| ||||||| |||||| |||||||||||| ||||||||||||||||    
T  2657677 tgaccccttatcttttaaaaaagttgtgattatgaccctttttttaggacacgtggcgt-ttctcaacaattttgggacaaaaggggccaaaattg 2657583  T

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Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 9554366 - 9554271
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||||||||||||||||| |||| |||       | |||| |||||| ||||||  |||||||||||||||||  ||||||||||    
T  9554366 tgaccccttatcttctcaaaaagttgcgactatggcccctgttttgagacacgtggcgccttctctacaattttgggacgaaagaagccaaaattg 9554271  T

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Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 24749937 - 24750032
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||||||||||||||| |||       || ||| |||||||||||| |||||||||  || |||||||||||||||||    
T  24749937 tgaccccttatctttacaaaaagttgcgattatggcccattttttggaacacgtggcgtcttcttagcaatttttagatgaaaggggccaaaattg 24750032  T

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Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 28920822 - 28920727
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnn-gggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaatt 116  Q
    ||||||||||||||  |||||||| ||||||||| |||        ||||||||||||||||||||||||||||| ||| |||||||| |||||||    
T  28920822 tgaccccttatctttacaaaaagtggcgattatggcccccttttttgggacatgtggcgtcttctcagcaatttttggatgaaaggggtcaaaatt 28920727  T

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Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 21148131 - 21148184
Alignment:
Q  67 gggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgtaa 120  Q
    |||||| ||||||| ||||||||| |||||||||||||||||||| ||||||||    
T  21148131 gggacacgtggcgttttctcagcagttttgggacgaaaggggccataattgtaa 21148184  T

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Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 29 - 118
Target Start/End: Original strand, 16971997 - 16972086
Alignment:
Q  29 ttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    ||||||||||||||  |||||||||||||||       ||||||  |||||| |||| ||||||||||| |||||| |||||||||||||    
T  16971997 ttatcttctcaaaatattgcgattatgacccctattttgggacacatggcgttttcttagcaattttggaacgaaatgggccaaaattgt 16972086  T

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Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 22786169 - 22786260
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaatt 116  Q
    |||||||||||||||||||||||||| |||   | |||       ||||||  |||||||||||||||||||||| ||||||| |||||||||||    
T  22786169 tgaccccttatcttctcaaaaagttgtgat---ggcccctgttttgggacacttggcgtcttctcagcaattttgagacgaaatgggccaaaatt 22786260  T

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Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 29676218 - 29676314
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    ||||||||||||||   ||||||||||||||||| |||       |||||| |||||| ||||||| |||||||  || ||||||||||||||||||    
T  29676218 tgaccccttatctttataaaaagttgcgattatggccccttttttgggacacgtggcgccttctcaacaattttttgatgaaaggggccaaaattgt 29676314  T

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Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 2260635 - 2260677
Alignment:
Q  152 tcgcaactttttaaaacttatgggatgaaaaatgcactttagc 194  Q
    |||||||||||||||||||| |||||||||| |||||||||||    
T  2260635 tcgcaactttttaaaacttaagggatgaaaagtgcactttagc 2260677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 47685240 - 47685335
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    |||||||||| |||  |||||||||||||| ||||||         ||||| |||||||||||| |||||||||||| |||||||||| |||||||    
T  47685240 tgaccccttacctttacaaaaagttgcgataatgacctcttttttaggacacgtggcgtcttcttagcaattttgggccgaaaggggcaaaaattg 47685335  T

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Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 31084777 - 31084683
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaatt 116  Q
    ||||||||||||||  ||||||||| ||||||||||||       ||||||||||| |  |||||| ||||||||| ||||||  ||||||||||    
T  31084777 tgaccccttatctttacaaaaagtttcgattatgaccccctttttgggacatgtggggctttctcaacaattttggaacgaaataggccaaaatt 31084683  T

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Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 10684933 - 10684965
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattat 54  Q
    |||||||||||||||||||||||||||||||||    
T  10684933 tgaccccttatcttctcaaaaagttgcgattat 10684965  T

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Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 11190426 - 11190380
Alignment:
Q  154 gcaactttttaaaacttatgggatgaaaaatgcactttagcctaata 200  Q
    |||||||||||||| ||| ||| |||||| |||||||||||||||||    
T  11190426 gcaactttttaaaatttaaggggtgaaaagtgcactttagcctaata 11190380  T

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Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 27277039 - 27276998
Alignment:
Q  196 taatattaaatgtgtaatttgatattattgtcaacgttacga 237  Q
    ||||||||||| ||| |||| |||||||||||||||||||||    
T  27277039 taatattaaatatgtgatttaatattattgtcaacgttacga 27276998  T

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Target: chr7 (Bit Score: 61; Significance: 3e-26; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 22 - 120
Target Start/End: Complemental strand, 9822264 - 9822167
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgtaa 120  Q
    ||||||||||||||||||||||||||||||||||||||       ||||||  ||||||||||||||||||||||||||||||||||| ||||||||||    
T  9822264 tgaccccttatcttctcaaaaagttgcgattatgaccccttttt-gggacacatggcgtcttctcagcaattttgggacgaaaggggctaaaattgtaa 9822167  T

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Target: chr7; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 22 - 120
Target Start/End: Complemental strand, 10724189 - 10724092
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgtaa 120  Q
    ||||||||||||||||||||||||||||||||||||||       ||||||  ||||||||||||||||||||||||||||||||||| ||||||||||    
T  10724189 tgaccccttatcttctcaaaaagttgcgattatgaccccttttt-gggacacatggcgtcttctcagcaattttgggacgaaaggggctaaaattgtaa 10724092  T

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Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 5087135 - 5087231
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    |||||||||||||| |||||||||||||||||||| ||       |||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  5087135 tgaccccttatcttttcaaaaagttgcgattatgatccctattttgggacacgtggcgtcttctcatcaattttgggacgaaaggggccaaaattgt 5087231  T

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Target: chr7; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 6650649 - 6650745
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    |||||||||||||||||||||||||||||||||| |||       | ||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  6650649 tgaccccttatcttctcaaaaagttgcgattatggcccctgttttgagacatgtggcgtcttctcatcaattttgggacgaaaggggctaaaattgt 6650745  T

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Target: chr7; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 120
Target Start/End: Complemental strand, 3403212 - 3403118
Alignment:
Q  26 cccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgtaa 120  Q
    ||||||| |||||||||| ||||||||||||||        |||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  3403212 cccttatgttctcaaaaacttgcgattatgaccacttttttgggacatgtggcgtctcctcaggaattttgggacgaaaggggccaaaattgtaa 3403118  T

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Target: chr7; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 22 - 120
Target Start/End: Original strand, 15681769 - 15681867
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgtaa 120  Q
    |||||||||||||| ||||||||||||||||||| ||        |||||| ||||||||||||||  |||||||||||||||||||||||||||||||    
T  15681769 tgaccccttatcttgtcaaaaagttgcgattatggcctcttttttgggacacgtggcgtcttctcataaattttgggacgaaaggggccaaaattgtaa 15681867  T

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Target: chr7; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 36746666 - 36746572
Alignment:
Q  24 accccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    ||||||||||||  ||||||||||||||||||||||       |||||| |||||||||||||| ||||||||||| ||||||||||||||||||    
T  36746666 accccttatctttacaaaaagttgcgattatgaccccttttttgggacacgtggcgtcttctcaacaattttgggatgaaaggggccaaaattgt 36746572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 26385400 - 26385496
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    ||||| |||||||||||||||||||||||||||| |||       ||||||||||||||||| | ||||||||| |||| |||||||||||||||||    
T  26385400 tgacctcttatcttctcaaaaagttgcgattatggcccatgttttgggacatgtggcgtcttattagcaattttaggacaaaaggggccaaaattgt 26385496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 39182073 - 39182169
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    |||||||||||||||||||||||||||||||||| ||        |||||| |||| || ||||||||||||||||||| |||||||||||||||||    
T  39182073 tgaccccttatcttctcaaaaagttgcgattatggcctctgttttgggacacgtggtgttttctcagcaattttgggacaaaaggggccaaaattgt 39182169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 41452414 - 41452319
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  ||||||||||||||||||||||       |||||| ||| |||||||||||||||||| ||| |||||||||||||||||    
T  41452414 tgaccccttatctttacaaaaagttgcgattatgaccccttttttgggacacgtgtcgtcttctcagcaatttttggatgaaaggggccaaaattg 41452319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 48176128 - 48176033
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  ||||||||||||||||||||||       |||||| ||||| |||||| ||||||||||||| |||||||||||||||||    
T  48176128 tgaccccttatctttacaaaaagttgcgattatgaccccttttctgggacacgtggcatcttctgagcaattttgggatgaaaggggccaaaattg 48176033  T

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Target: chr7; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 10655470 - 10655563
Alignment:
Q  24 accccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||  ||||||||||||||||||||||       |||||| ||||| |||||| ||||||||||||| |||||||||||||||||    
T  10655470 accccttatctttacaaaaagttgcgattatgacccattttctgggacacgtggcatcttctgagcaattttgggatgaaaggggccaaaattg 10655563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 19195378 - 19195283
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||||||| ||||||| |||       ||||||||||||||||||||| ||||||| ||| |||||||||||||||||    
T  19195378 tgaccccttatctttacaaaaagttgtgattatggccccttttttgggacatgtggcgtcttctcaacaatttttggatgaaaggggccaaaattg 19195283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 20636758 - 20636852
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  ||||||||||||||||||||||       |||||| ||||||| |||||||||||||||||| | |||||||||||||||    
T  20636758 tgaccccttatctttacaaaaagttgcgattatgaccccttttttgggacacgtggcgttttctcagcaattttgggatg-aaggggccaaaattg 20636852  T

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Target: chr7; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 21224517 - 21224422
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||||||||||||||| |||       | |||| |||||||||||||||||||||| ||| |||||||||||||||||    
T  21224517 tgaccccttatctttacaaaaagttgcgattatggccctttttttgagacacgtggcgtcttctcagcaatttttggatgaaaggggccaaaattg 21224422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 31494049 - 31494144
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||||||||||||||| |||       || ||| |||||||||||||||||||||| ||| |||||||||||||||||    
T  31494049 tgaccccttatctttacaaaaagttgcgattatggccccttttttggaacacgtggcgtcttctcagcaattttaggatgaaaggggccaaaattg 31494144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 42303286 - 42303381
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    |||||||||||||||||||||| ||||||| |||||||       |||||| |||| |||||||||||||||||| ||| |||||||||||||||||    
T  42303286 tgaccccttatcttctcaaaaacttgcgatcatgaccccttttt-gggacacgtggtgtcttctcagcaattttgagacaaaaggggccaaaattgt 42303381  T

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Target: chr7; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 118
Target Start/End: Complemental strand, 27869360 - 27869264
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    ||||||||||||||  |||||||||||||||||| |||       ||||||  ||||||||||||||||||||||||| ||| | ||||||||||||    
T  27869360 tgaccccttatctttacaaaaagttgcgattatggccccttttttgggacacatggcgtcttctcagcaattttgggatgaaggaggccaaaattgt 27869264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 7365362 - 7365457
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    |||| ||||||||||||||||||||||||||||  ||        |||||| ||| | ||||||||||||||||||||||||| ||||||||||||    
T  7365362 tgactccttatcttctcaaaaagttgcgattattgcctctgttttgggacacgtgacatcttctcagcaattttgggacgaaaagggccaaaattg 7365457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 33237578 - 33237484
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    |||||||||| ||||| ||||||||| ||||||||||        |||||| |||||||||||||||||||||||||| |||| ||||||||||||    
T  33237578 tgaccccttaccttctaaaaaagttgtgattatgaccactgttttgggacacgtggcgtcttctcagcaattttgggatgaaa-gggccaaaattg 33237484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 35337687 - 35337592
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  ||||||||||||||||||||||       |||||| ||||||||||||||  ||||||  || |||||||||||||||||    
T  35337687 tgaccccttatctttacaaaaagttgcgattatgaccccttttttgggacacgtggcgtcttctcaataattttttgatgaaaggggccaaaattg 35337592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 5348166 - 5348263
Alignment:
Q  22 tgaccccttatcttctcaaaaa-gttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    |||||||||||||||| ||||| |||||||||||| | |       |||| ||||| |||||||||||||||||||||||||||| || |||||||||    
T  5348166 tgaccccttatcttctaaaaaaagttgcgattatggctcctgttttgggatatgtgacgtcttctcagcaattttgggacgaaagaggtcaaaattgt 5348263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 17305903 - 17306000
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnn-gggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    ||||||||||| ||  |||||||||| |||||||||||        ||||||||||||||||||||| ||||||||||| ||||||| ||||||||||    
T  17305903 tgaccccttatttttacaaaaagttgtgattatgacccccttttttgggacatgtggcgtcttctcatcaattttgggatgaaagggcccaaaattgt 17306000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 117
Target Start/End: Complemental strand, 11843291 - 11843248
Alignment:
Q  74 gtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  11843291 gtggcgtcttctcagcaattttgggatgaaaggggccaaaattg 11843248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 117
Target Start/End: Complemental strand, 13577899 - 13577856
Alignment:
Q  74 gtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  13577899 gtggcgtcttctcagcaattttgggatgaaaggggccaaaattg 13577856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 25002846 - 25002942
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    |||||||||||||||||| ||| |||||||||||||||       ||||||  ||||||| ||| ||||| |||||||  |||||||||||||||||    
T  25002846 tgaccccttatcttctcataaatttgcgattatgacccgtgttttgggacacatggcgtcctcttagcaactttgggataaaaggggccaaaattgt 25002942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 42271471 - 42271567
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    ||||||||||| ||  |||||||||||||||||| |||       || ||| |||||||||||||||||||||| ||| ||| ||||||||||||||    
T  42271471 tgaccccttatgtttacaaaaagttgcgattatggccctttttttggaacacgtggcgtcttctcagcaattttcggatgaagggggccaaaattgt 42271567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 113
Target Start/End: Original strand, 2331152 - 2331243
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaa 113  Q
    |||| |||||||||  |||||||||||||||||| ||        |||||| |||||||||||||||||||||| ||| |||||||||||||    
T  2331152 tgactccttatctttacaaaaagttgcgattatggcctattttttgggacaagtggcgtcttctcagcaatttttggatgaaaggggccaaa 2331243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 3562598 - 3562503
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||||||||||||||| |||        ||||| |||||||||||||||||| ||| ||| ||| |||||||||||||    
T  3562598 tgaccccttatctttacaaaaagttgcgattatggccccttttttaggacacgtggcgtcttctcagcaagtttaggatgaagggggccaaaattg 3562503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 19493458 - 19493552
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    |||||| ||||||||||||||||| | ||||||| |||        ||||| |||||||||||||||| ||||||||| |||||||||||||||||    
T  19493458 tgaccctttatcttctcaaaaagt-gtgattatggcccctgttttaggacacgtggcgtcttctcagccattttgggatgaaaggggccaaaattg 19493552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 24597680 - 24597586
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||| ||||  |||||||||||||||||| |||       | |||| |||||||||||||||||||||||||| | |||||||||||||||    
T  24597680 tgaccccttctctttacaaaaagttgcgattatggccccttgtttgagacacgtggcgtcttctcagcaattttgggatg-aaggggccaaaattg 24597586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 26126393 - 26126488
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    |||||||||||||||||||||||||||||||||| |||       |||||| | | | ||||||| |||||||||| || ||||||||| ||||||    
T  26126393 tgaccccttatcttctcaaaaagttgcgattatggcccctgttttgggacacgagacatcttctctgcaattttggaacaaaaggggccgaaattg 26126488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 10023949 - 10023855
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  ||||||||||||| |||| |||       |||||| |||| |||||||||||||||||| ||| ||||||||||||||||    
T  10023949 tgaccccttatctttacaaaaagttgcgaatatggccccttttt-gggacacgtggtgtcttctcagcaattttgagacaaaaggggccaaaattg 10023855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 39440281 - 39440199
Alignment:
Q  26 cccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaagggg 108  Q
    |||||||||| |||||||||||||||||||||||        |||||||||||||||||||| |||||||   ||||||||||    
T  39440281 cccttatcttttcaaaaagttgcgattatgacccctgttttaggacatgtggcgtcttctcaacaattttaaaacgaaagggg 39440199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 24464715 - 24464811
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    ||||||||||||||||||||| ||||||||||||  |        | ||||||||||||||||||||||||||| | | ||| |||| |||||||||    
T  24464715 tgaccccttatcttctcaaaatgttgcgattatggtcattgttttgtgacatgtggcgtcttctcagcaattttagaatgaagggggacaaaattgt 24464811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 55
Target Start/End: Original strand, 5111578 - 5111611
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatg 55  Q
    ||||||||||||||||||||||||||||||||||    
T  5111578 tgaccccttatcttctcaaaaagttgcgattatg 5111611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 115
Target Start/End: Complemental strand, 44078036 - 44077942
Alignment:
Q  22 tgaccccttatcttctcaaaaa-gttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaat 115  Q
    ||||||||||||||  |||||| ||||||||||||||         ||||||  ||||||||||| ||||||||||||||||||||| |||||||    
T  44078036 tgaccccttatctttacaaaaaagttgcgattatgacatcctttttgggacacatggcgtcttcttagcaattttgggacgaaagggaccaaaat 44077942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 15093860 - 15093820
Alignment:
Q  78 cgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    |||||||||||||||||||| ||||||||| ||||||||||    
T  15093860 cgtcttctcagcaattttggaacgaaagggaccaaaattgt 15093820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 29051757 - 29051789
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattat 54  Q
    |||||||||||||||||||||||||||||||||    
T  29051757 tgaccccttatcttctcaaaaagttgcgattat 29051789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 52
Target Start/End: Complemental strand, 4571508 - 4571478
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgatt 52  Q
    |||||||||||||||||||||||||||||||    
T  4571508 tgaccccttatcttctcaaaaagttgcgatt 4571478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 55
Target Start/End: Complemental strand, 6798047 - 6798014
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatg 55  Q
    |||||||||||||||| |||||||||||||||||    
T  6798047 tgaccccttatcttctaaaaaagttgcgattatg 6798014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 9822330 - 9822371
Alignment:
Q  155 caactttttaaaacttatgggatgaaaaatgcactttagcct 196  Q
    ||||||||||||||||| ||| |||||| |||||||||||||    
T  9822330 caactttttaaaacttaaggggtgaaaagtgcactttagcct 9822371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 10724255 - 10724296
Alignment:
Q  155 caactttttaaaacttatgggatgaaaaatgcactttagcct 196  Q
    ||||||||||||||||| ||| |||||| |||||||||||||    
T  10724255 caactttttaaaacttaaggggtgaaaagtgcactttagcct 10724296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 115
Target Start/End: Complemental strand, 24448151 - 24448114
Alignment:
Q  78 cgtcttctcagcaattttgggacgaaaggggccaaaat 115  Q
    |||||||||||||||||||| ||||||||| |||||||    
T  24448151 cgtcttctcagcaattttggaacgaaagggaccaaaat 24448114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 8526981 - 8527029
Alignment:
Q  69 gacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    |||| ||||| |||||||||||||||||||| |||  ||||||||||||    
T  8526981 gacacgtggcatcttctcagcaattttgggatgaagagggccaaaattg 8527029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 9157138 - 9157098
Alignment:
Q  78 cgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    ||||||||||||||||||| |||||||| | ||||||||||    
T  9157138 cgtcttctcagcaattttgagacgaaagagaccaaaattgt 9157098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 9157215 - 9157183
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattat 54  Q
    ||||| |||||||||||||||||||||||||||    
T  9157215 tgaccacttatcttctcaaaaagttgcgattat 9157183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 236
Target Start/End: Original strand, 18561726 - 18561766
Alignment:
Q  196 taatattaaatgtgtaatttgatattattgtcaacgttacg 236  Q
    ||||||||||| ||| |||| ||||||||||||||||||||    
T  18561726 taatattaaatatgtgatttaatattattgtcaacgttacg 18561766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 24851038 - 24850998
Alignment:
Q  196 taatattaaatgtgtaatttgatattattgtcaacgttacg 236  Q
    ||||||||||| ||| |||| ||||||||||||||||||||    
T  24851038 taatattaaatatgtgatttaatattattgtcaacgttacg 24850998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 236
Target Start/End: Original strand, 29328512 - 29328552
Alignment:
Q  196 taatattaaatgtgtaatttgatattattgtcaacgttacg 236  Q
    ||||||||||| ||| |||| ||||||||||||||||||||    
T  29328512 taatattaaatatgtgatttaatattattgtcaacgttacg 29328552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 8e-24; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 28365651 - 28365744
Alignment:
Q  24 accccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||||||||||||||||||||||||       |||||   |||||||||||||||||||||||||||||||||| ||||||||    
T  28365651 accccttatcttctcaaaaagttgcgattatgaccctttttttgggacgcatggcgtcttctcagcaattttgggacgaaagggggcaaaattg 28365744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 15700886 - 15700981
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  ||||||||||||||||||||||       |||||| ||||| |||||| ||||||||||||| |||||||||||||||||    
T  15700886 tgaccccttatctttacaaaaagttgcgattatgaccccttttctgggacacgtggcatcttctgagcaattttgggatgaaaggggccaaaattg 15700981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 15735203 - 15735298
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||||||||||||||| |||       |||||| |||||||||||||| ||||||||||| |||||||||||||||||    
T  15735203 tgaccccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcaacaattttgggatgaaaggggccaaaattg 15735298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 30714439 - 30714344
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    |||||| |||||||  |||||||||| ||||||| |||       ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  30714439 tgacccgttatctttacaaaaagttgtgattatggccccttttttgggacatgtggcgtcttctcagcaattttgggatgaaaggggccaaaattg 30714344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 38716332 - 38716427
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||||||||||||||| |||       |||||| |||||||||||||||||||||| ||| |||||||||||||||||    
T  38716332 tgaccccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcagcaatttttggatgaaaggggccaaaattg 38716427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 9787698 - 9787794
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    ||||||||||||||  ||||||||| |||||||| |||       |||||| |||||||||||||||||||||| ||| ||||||||||||||||||    
T  9787698 tgaccccttatctttacaaaaagttacgattatggccccttttttgggacacgtggcgtcttctcagcaatttttggatgaaaggggccaaaattgt 9787794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 18537993 - 18537898
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  ||||||||||| |||||| |||       |||||| |||||||||||||||||||||| ||| |||||||||||||||||    
T  18537993 tgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatttttggatgaaaggggccaaaattg 18537898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 22191185 - 22191279
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  ||||||||| ||||||||||||       |||||| |||||| ||||||||||||||||||| |||||||||||||||||    
T  22191185 tgaccccttatctttacaaaaagttacgattatgaccctttttt-gggacacgtggcgccttctcagcaattttgggatgaaaggggccaaaattg 22191279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 38 - 118
Target Start/End: Complemental strand, 4104973 - 4104893
Alignment:
Q  38 caaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    ||||||||||||||||||||||       || ||| ||||||||||||||||||||||||||||||| ||| |||||||||    
T  4104973 caaaaagttgcgattatgacccctttttaggaacacgtggcgtcttctcagcaattttgggacgaaatgggtcaaaattgt 4104893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 116
Target Start/End: Complemental strand, 25884340 - 25884248
Alignment:
Q  24 accccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaatt 116  Q
    |||||||||||||||||||||||||||||||  |||       ||||| ||| | || ||||||||||||||||||||||| |||||||||||    
T  25884340 accccttatcttctcaaaaagttgcgattattgcccctgttttgggacgtgtagtgttttctcagcaattttgggacgaaaagggccaaaatt 25884248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 2986825 - 2986920
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||||||||||||||| |||        |||||  ||||||||||||||||||||||||| ||| |||||||||||||    
T  2986825 tgaccccttatctttacaaaaagttgcgattatggcccctttttttggacacatggcgtcttctcagcaattttgggatgaagggggccaaaattg 2986920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 11176046 - 11176141
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||||||| ||||||| |||       |||||| |||||||||||||||||||||||||| |||||||  ||||||||    
T  11176046 tgaccccttatctttacaaaaagttgtgattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaagggatcaaaattg 11176141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 17368355 - 17368450
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  ||||||||||| |||||| |||       |||||| |||||||||||||| || |||| ||| |||||||||||||||||    
T  17368355 tgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcaacattttttggatgaaaggggccaaaattg 17368450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 25298962 - 25298871
Alignment:
Q  26 cccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||  |||||||||||||||||| |||       |||||| ||||| |||||||| ||||||||||| ||| |||||||||||||    
T  25298962 cccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcatcttctcaacaattttgggatgaagggggccaaaattg 25298871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 118
Target Start/End: Complemental strand, 21773493 - 21773401
Alignment:
Q  25 ccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    ||||||||||||| |||||||||||||| |  |||       |||||| ||||| |||||||| |||||||||||||||| |||||||||||||    
T  21773493 ccccttatcttctaaaaaagttgcgattttagcccctgttctgggacacgtggcttcttctcaacaattttgggacgaaa-gggccaaaattgt 21773401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 36464412 - 36464507
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    |||| ||||||||||||||||||||||||| ||| |||       | |||| ||| | ||||||||||||||||||||||||| || ||||||||||    
T  36464412 tgactccttatcttctcaaaaagttgcgat-atggccccttttttgagacacgtgacatcttctcagcaattttgggacgaaatggaccaaaattgt 36464507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 6763882 - 6763787
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||||| ||||||| | |||       |||||| ||||||||||||||||||||||||||  ||| || |||||||||    
T  6763882 tgaccccttatctttacaaaaagtagcgattacggccccttttttgggacacgtggcgtcttctcagcaattttgggataaaatggaccaaaattg 6763787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 22387187 - 22387141
Alignment:
Q  67 gggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaa 113  Q
    |||||| ||||||||||||||||||||||| ||||||||||| ||||    
T  22387187 gggacaagtggcgtcttctcagcaattttgagacgaaaggggtcaaa 22387141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 9051192 - 9051098
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||| ||||||||  |||||||||||||||||| |||       |||||| | ||||||||||||||||||||| || ||| |||||||||||||    
T  9051192 tgacctcttatctttacaaaaagttgcgattatggccctttttt-gggacacggggcgtcttctcagcaattttgagatgaagggggccaaaattg 9051098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 26829254 - 26829160
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaatt 116  Q
    |||||||||||| ||||||||||||| ||||||| |||        ||  | || ||||||||||| |||||||| |||||||||||||||||||    
T  26829254 tgaccccttatcatctcaaaaagttgtgattatggcccccttttttgggaacgtagcgtcttctcaacaattttgagacgaaaggggccaaaatt 26829160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 26829346 - 26829390
Alignment:
Q  152 tcgcaactttttaaaacttatgggatgaaaaatgcactttagcct 196  Q
    ||||||| |||||||||||| |||||||||| |||||||||||||    
T  26829346 tcgcaacattttaaaacttaagggatgaaaagtgcactttagcct 26829390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 237
Target Start/End: Original strand, 36270887 - 36270928
Alignment:
Q  196 taatattaaatgtgtaatttgatattattgtcaacgttacga 237  Q
    ||||||||||| |||||||| |||||||||||||| ||||||    
T  36270887 taatattaaatatgtaatttaatattattgtcaacattacga 36270928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 28365555 - 28365507
Alignment:
Q  152 tcgcaactttttaaaacttatgggatgaaaaatgcactttagcctaata 200  Q
    |||||||||||||||| ||| ||| |||||| |||| ||||||||||||    
T  28365555 tcgcaactttttaaaatttaaggggtgaaaagtgcattttagcctaata 28365507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 236
Target Start/End: Original strand, 41662000 - 41662040
Alignment:
Q  196 taatattaaatgtgtaatttgatattattgtcaacgttacg 236  Q
    ||||||||||| ||| |||| ||||||||||||||||||||    
T  41662000 taatattaaatatgtgatttaatattattgtcaacgttacg 41662040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 119
Target Start/End: Original strand, 10061 - 10157
Alignment:
Q  23 gaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgta 119  Q
    ||||||||||||||||||||||||||||||||  |||       | ||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  10061 gaccccttatcttctcaaaaagttgcgattatttccccttttttgtgacatgtggcgtcttctcaacaattttgggacgaaagggaccaaaattgta 10157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 3e-23; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 34528287 - 34528383
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    |||||||||||||||||||||||||||||||||| |         ||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  34528287 tgaccccttatcttctcaaaaagttgcgattatggcgactgttttgggacatgtgatgtcttctcagcaattttgggacgaaaggggccaaaattgt 34528383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 32451865 - 32451961
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    ||||||||||||||  ||||||||||||||||||||||       | ||||||||||||||||||| ||||||| ||| ||||||||||||||||||    
T  32451865 tgaccccttatctttacaaaaagttgcgattatgaccccttttttgagacatgtggcgtcttctcaacaatttttggatgaaaggggccaaaattgt 32451961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 14572343 - 14572248
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||   ||||||||||||||||| |||       |||||||||||| |||||||||||||||| ||| |||||||||||||||||    
T  14572343 tgaccccttatctttataaaaagttgcgattatggccctttttttgggacatgtggcatcttctcagcaatttttggatgaaaggggccaaaattg 14572248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 113
Target Start/End: Complemental strand, 23124885 - 23124794
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaa 113  Q
    ||||||||||||||  ||||||||||||||||||||||        |||||||||||||||||||||||| ||||||||||| | |||||||    
T  23124885 tgaccccttatctttacaaaaagttgcgattatgacccctttttgaggacatgtggcgtcttctcagcaagtttgggacgaacgaggccaaa 23124794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 35102656 - 35102561
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  ||||||||||| |||||| |||       |||||| |||||||||||||||||||||||||| ||| |||||||||||||    
T  35102656 tgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaagggggccaaaattg 35102561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 25819823 - 25819917
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaatt 116  Q
    ||||||||||||||  ||||||||||||||||||||||       |||||| ||||||||||||||||||||||  ||  |||||||||||||||    
T  25819823 tgaccccttatctttacaaaaagttgcgattatgaccccttttttgggacacgtggcgtcttctcagcaattttttgataaaaggggccaaaatt 25819917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 120
Target Start/End: Original strand, 26240096 - 26240194
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgtaa 120  Q
    |||||||||||||||| |||||||||| ||||||||||        ||||| ||||||||||||| ||| |||||| |||||| |||||||||||||||    
T  26240096 tgaccccttatcttctaaaaaagttgcaattatgaccccttttataggacacgtggcgtcttctcggcagttttggaacgaaatgggccaaaattgtaa 26240194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 20863893 - 20863798
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||||||||||||||| |||       ||||||  ||||||||||||||||||||||| |||||| ||||| ||||||    
T  20863893 tgaccccttatctttacaaaaagttgcgattatggccccttttttgggacacatggcgtcttctcagcaattttggaacgaaaagggccgaaattg 20863798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 24051147 - 24051242
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||| ||  |||||||||||||||||||||        |||||| |||||||||||||| ||||||||||| |||| ||||||||||||    
T  24051147 tgaccccttatatttacaaaaagttgcgattatgacctcttttttgggacacgtggcgtcttctcatcaattttgggatgaaatgggccaaaattg 24051242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 31210933 - 31211028
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||||||||||||||  | |       |||||| |||| ||||||||||||||||||||| |||||||||||||||||    
T  31210933 tgaccccttatctttacaaaaagttgcgattatagcaccttttttgggacacgtggtgtcttctcagcaattttgggatgaaaggggccaaaattg 31211028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 19282376 - 19282296
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaa 104  Q
    |||||||||||||| |||||||||||||||||||||||        ||||||||| | |||||||||||||||||||||||||    
T  19282376 tgaccccttatcttttcaaaaagttgcgattatgaccccttttt--ggacatgtgacttcttctcagcaattttgggacgaaa 19282296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 2636916 - 2637013
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnnggga-catgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    ||||||||||| ||  ||||||||||||||||||||||        ||| ||||||||||||||||  ||||||| ||||||||||||||||||||||    
T  2636916 tgaccccttatttttacaaaaagttgcgattatgaccccctttctaggaacatgtggcgtcttctcttcaattttaggacgaaaggggccaaaattgt 2637013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 118
Target Start/End: Complemental strand, 4597570 - 4597474
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    ||||||||||||||  ||||||||||| |||||| |||       ||||||||||||||||| |||| |||||||||  ||| ||||||||||||||    
T  4597570 tgaccccttatctttacaaaaagttgcaattatggccccttttttgggacatgtggcgtcttttcagtaattttgggttgaagggggccaaaattgt 4597474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 24603500 - 24603596
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    ||||||||||||||  |||||||||||||||||| |||        |||||  ||||||||||||||||||||||||| ||| ||||||||| ||||    
T  24603500 tgaccccttatctttacaaaaagttgcgattatggcccctttttttggacacatggcgtcttctcagcaattttgggatgaagggggccaaagttgt 24603596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 2058991 - 2058904
Alignment:
Q  30 tatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    |||||||| ||||||||| |||||||||||        |||||||| |||||||||||||||||||| |||||||  |||||||||||    
T  2058991 tatcttctaaaaaagttgggattatgacccctgttttaggacatgtagcgtcttctcagcaattttgagacgaaaatggccaaaattg 2058904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 12291582 - 12291487
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    |||||| |||||||||||||||||||||||||||||         ||||||  ||||||||||||| |||||||| ||||||| || |||||||||    
T  12291582 tgaccctttatcttctcaaaaagttgcgattatgacatctgttttgggacacatggcgtcttctcaacaattttgtgacgaaatggaccaaaattg 12291487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 16415495 - 16415403
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaatt 116  Q
    ||||| |||||||||| |||||||||||||||| ||||        | ||||||  |||||||||||||||||||||||||||||| ||||||||    
T  16415495 tgaccgcttatcttctaaaaaagttgcgattataacccattttttagaacatgt--cgtcttctcagcaattttgggacgaaagggaccaaaatt 16415403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 18791496 - 18791591
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    |||||||| |||||  |||||||||||||||||| |||        ||||| |||||||||||||| ||||||||||| ||| |||||||||||||    
T  18791496 tgacccctcatctttacaaaaagttgcgattatggccccttttttaggacacgtggcgtcttctcaacaattttgggatgaagggggccaaaattg 18791591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 113
Target Start/End: Original strand, 22269545 - 22269636
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaa 113  Q
    ||||||||||||||  |||||||||| | ||||| |||       |||||| |||||||||||||| |||||||| ||||||||||||||||    
T  22269545 tgaccccttatctttacaaaaagttgtgtttatggccccttttttgggacacgtggcgtcttctcaacaattttgagacgaaaggggccaaa 22269636  T

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Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 120
Target Start/End: Original strand, 3118818 - 3118916
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgtaa 120  Q
    ||||| ||||||||  |||||| |||||||||||||||       |||||| ||| | |||||| | ||||||||||| ||||||||||||||||||||    
T  3118818 tgacctcttatctttacaaaaatttgcgattatgaccccttttctgggacacgtgacatcttctgatcaattttgggatgaaaggggccaaaattgtaa 3118916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 116
Target Start/End: Complemental strand, 24615813 - 24615764
Alignment:
Q  67 gggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaatt 116  Q
    |||||||||||||| |||||||||||||| ||||||||| ||||||||||    
T  24615813 gggacatgtggcgttttctcagcaatttttggacgaaagaggccaaaatt 24615764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 118
Target Start/End: Original strand, 4371076 - 4371127
Alignment:
Q  67 gggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    ||||||| |||||| ||||||||||||||| || ||||||||||||||||||    
T  4371076 gggacatatggcgttttctcagcaattttgagatgaaaggggccaaaattgt 4371127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 113
Target Start/End: Original strand, 9241791 - 9241882
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaa 113  Q
    |||||||||||||||||||||||||||||||||| ||        ||||||  ||||| |||||||| |||||||| | |||||||| ||||    
T  9241791 tgaccccttatcttctcaaaaagttgcgattatgccctctgttttgggacacatggcgccttctcagtaattttggaatgaaaggggtcaaa 9241882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 118
Target Start/End: Original strand, 12427389 - 12427468
Alignment:
Q  39 aaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    |||||||||||||| ||||||       |||||| ||| | ||||||||||||||||| |||||||| ||||||||||||    
T  12427389 aaaaagttgcgattttgacccattctttgggacacgtgccatcttctcagcaattttgcgacgaaagaggccaaaattgt 12427468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 202
Target Start/End: Original strand, 16415591 - 16415641
Alignment:
Q  152 tcgcaactttttaaaacttatgggatgaaaaatgcactttagcctaatatt 202  Q
    |||||||||||||||| ||| ||| |||||| |||||||||||||||||||    
T  16415591 tcgcaactttttaaaatttaaggggtgaaaagtgcactttagcctaatatt 16415641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 18749261 - 18749166
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||||||| ||||||| |||       |||||||||||| |||||| | ||||||| | | |||||||||||||||||    
T  18749261 tgaccccttatctttacaaaaagttgtgattatgtccccttttttgggacatgtggcttcttcttatcaatttttgtatgaaaggggccaaaattg 18749166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 118
Target Start/End: Complemental strand, 22968316 - 22968225
Alignment:
Q  26 cccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    ||||||||||  ||||||||||||||||||||||       | |||| ||| | |||||| ||||||||||||| ||||||||||||||||||    
T  22968316 cccttatctttacaaaaagttgcgattatgacccttttct-gagacacgtgacatcttctgagcaattttgggatgaaaggggccaaaattgt 22968225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 118
Target Start/End: Original strand, 23820077 - 23820168
Alignment:
Q  26 cccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    ||||||||||  ||||||||||||||||||||||       | |||| ||| | |||||| ||||||||||||| ||||||||||||||||||    
T  23820077 cccttatctttacaaaaagttgcgattatgacccttttct-gagacacgtgacatcttctgagcaattttgggatgaaaggggccaaaattgt 23820168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 26710472 - 26710378
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||||||||||||||| |||       |||||| ||||| ||||||||| |||||||||| | |||||||| ||||||    
T  26710472 tgaccccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcatcttctcagtaattttgggatg-aaggggccgaaattg 26710378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 117
Target Start/End: Original strand, 34834109 - 34834159
Alignment:
Q  67 gggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    |||||| |||||||||||||||||||||||||| |||  ||||||||||||    
T  34834109 gggacacgtggcgtcttctcagcaattttgggatgaagtgggccaaaattg 34834159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 55
Target Start/End: Complemental strand, 4013831 - 4013798
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatg 55  Q
    ||||||||||||||||||||| ||||||||||||    
T  4013831 tgaccccttatcttctcaaaatgttgcgattatg 4013798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 8412897 - 8412934
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgaccc 59  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  8412897 tgaccccttatctttacaaaaagttgcgattatgaccc 8412934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 28755726 - 28755685
Alignment:
Q  196 taatattaaatgtgtaatttgatattattgtcaacgttacga 237  Q
    ||||||||||| |||||||| || ||||||||||||||||||    
T  28755726 taatattaaatatgtaatttaatgttattgtcaacgttacga 28755685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 16558951 - 16558911
Alignment:
Q  196 taatattaaatgtgtaatttgatattattgtcaacgttacg 236  Q
    ||||||||||| ||| |||| ||||||||||||||||||||    
T  16558951 taatattaaatatgtgatttaatattattgtcaacgttacg 16558911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 2214 - 2119
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  ||||||||||||||||||||||       |||||| |||||||||||||||||||||| ||| |||||||||||||||||    
T  2214 tgaccccttatctttacaaaaagttgcgattatgaccccttttttgggacacgtggcgtcttctcagcaatttttggatgaaaggggccaaaattg 2119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 29855 - 29950
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||||||||||||||| |||||| ||        || || |||||||||||||||||||||||||||||||||||||||||||||    
T  29855 tgaccccttatcttctcaaaaagttgcaattatggcctctgatttggaacctgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 29950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 113
Target Start/End: Complemental strand, 18253051 - 18252960
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaa 113  Q
    |||||||||||||||||||||||||| ||||||| ||        |||||| ||||||||||||||||||||||||||||||||||||||||    
T  18253051 tgaccccttatcttctcaaaaagttgtgattatggccactgttttgggacacgtggcgtcttctcagcaattttgggacgaaaggggccaaa 18252960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 3208119 - 3208214
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    |||||||||||||||| |||||||||||||||||||||       |||||| ||||||||||||||| ||||||||||||||| | |||||||||||    
T  3208119 tgaccccttatcttcttaaaaagttgcgattatgacccattttttgggacacgtggcgtcttctcagtaattttgggacgaaa-gagccaaaattgt 3208214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 8802565 - 8802470
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||||||||||||||| |||       || |||||||||||||||||||||||||||||| ||| |||||||||||||    
T  8802565 tgaccccttatctttacaaaaagttgcgattatggccccttttttggaacatgtggcgtcttctcagcaattttgggatgaagggggccaaaattg 8802470  T

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Target: chr8; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 19391552 - 19391457
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||||||||||||||| |||       |||||| |||||||||||||||||||||| ||| |||||||||||||||||    
T  19391552 tgaccccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcagcaatttttggatgaaaggggccaaaattg 19391457  T

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Target: chr8; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 38630194 - 38630289
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  ||||||||||||||||||||||       |||||| ||||||||||||||||||||||| || ||| |||||||||||||    
T  38630194 tgaccccttatctttacaaaaagttgcgattatgaccccttttttgggacacgtggcgtcttctcagcaattttgagatgaagggggccaaaattg 38630289  T

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Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 7117277 - 7117183
Alignment:
Q  24 accccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    ||||||||||||  ||||||||||| |||||| |||       |||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  7117277 accccttatctttacaaaaagttgcaattatggccctttttttgggacatgtggcgtcttctcagcagttttaggacgaaaggggccaaaattgt 7117183  T

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Target: chr8; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 19924404 - 19924498
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaatt 116  Q
    ||||||||||||||  ||||||||||||||||||||||       |||||| ||||||||||||||||||||||  ||  |||||||||||||||    
T  19924404 tgaccccttatctttacaaaaagttgcgattatgaccccttttttgggacacgtggcgtcttctcagcaattttttgataaaaggggccaaaatt 19924498  T

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Target: chr8; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 23565228 - 23565324
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    ||||||||||||||  |||||||||||||||||| |||          |||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  23565228 tgaccccttatctttacaaaaagttgcgattatggcccttttttttaaacatgtggcgtcttctcagcaatttttggatgaaaggggccaaaattgt 23565324  T

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Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 5192436 - 5192341
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||| ||||||||  |||||||||||||||||| |||       |||||| |||||||||||||||||||||| |||  ||||||||||||||||    
T  5192436 tgacctcttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcagcaatttttggataaaaggggccaaaattg 5192341  T

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Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 18881668 - 18881573
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  ||||||||||| ||||||||||       ||||||  ||| ||||||||| ||||||||||||||| |||||||||||||    
T  18881668 tgaccccttatctttacaaaaagttgcaattatgaccccttatttgggacacttggtgtcttctcaacaattttgggacgaagggggccaaaattg 18881573  T

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Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 1824750 - 1824839
Alignment:
Q  28 cttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    ||||||||||||||||||||||| |||| ||        |||||| |||||||||||||| |||||||| |||||||||||||||||||||    
T  1824750 cttatcttctcaaaaagttgcgagtatggcc-ttgttttgggacacgtggcgtcttctcaacaattttgagacgaaaggggccaaaattgt 1824839  T

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Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 1859195 - 1859284
Alignment:
Q  28 cttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    ||||||||||||||||||||||| |||| ||        |||||| |||||||||||||| |||||||| |||||||||||||||||||||    
T  1859195 cttatcttctcaaaaagttgcgagtatggcc-ttgttttgggacacgtggcgtcttctcaacaattttgagacgaaaggggccaaaattgt 1859284  T

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Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 67 - 116
Target Start/End: Complemental strand, 22452293 - 22452244
Alignment:
Q  67 gggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaatt 116  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  22452293 gggacacgtggcgtcttctcagcaattttgggacgaaatgggccaaaatt 22452244  T

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Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 41688275 - 41688202
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaatttt 95  Q
    ||||||||||||||||||||||||||||||||||||||       |||||| || | |||||||||||||||||    
T  41688275 tgaccccttatcttctcaaaaagttgcgattatgacccatgttttgggacacgtagtgtcttctcagcaatttt 41688202  T

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Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 118
Target Start/End: Complemental strand, 4423194 - 4423099
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    |||||||||||||| ||||||| |||||||||||||||          ||||||||| |||||||||||||||||||||||| ||| ||||||||||    
T  4423194 tgaccccttatcttttcaaaaaattgcgattatgaccctttttttta-acatgtggcatcttctcagcaattttgggacgaaggggaccaaaattgt 4423099  T

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Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 118
Target Start/End: Original strand, 31268463 - 31268514
Alignment:
Q  67 gggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    |||||||| |||||||||| ||||||||| ||||||||||||||||||||||    
T  31268463 gggacatgcggcgtcttcttagcaattttaggacgaaaggggccaaaattgt 31268514  T

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Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 4519032 - 4518938
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||||||||||||||| |||       |||||| |||||||||||||| |||||||| || | |||||||||||||||    
T  4519032 tgaccccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcaacaattttgagatg-aaggggccaaaattg 4518938  T

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Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 113
Target Start/End: Original strand, 17648382 - 17648473
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaa 113  Q
    ||||||||||||||  |||||||||||||||||| |||        ||||| ||||| |||||||||||||||| ||| |||||||||||||    
T  17648382 tgaccccttatctttacaaaaagttgcgattatggccccctttttaggacacgtggcctcttctcagcaatttttggatgaaaggggccaaa 17648473  T

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Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 117
Target Start/End: Complemental strand, 21929967 - 21929917
Alignment:
Q  67 gggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    |||||| |||||||||||||||||||||||||| ||| |||||||||||||    
T  21929967 gggacacgtggcgtcttctcagcaattttgggatgaagggggccaaaattg 21929917  T

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Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 15869493 - 15869408
Alignment:
Q  32 tcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaa-ggggccaaaatt 116  Q
    ||||||||||||||||||||||||||||       |||||| |||||| ||||||||||||||| | | |||| ||||||||||||    
T  15869493 tcttctcaaaaagttgcgattatgacccctgttttgggacacgtggcgacttctcagcaattttagaatgaaagggggccaaaatt 15869408  T

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Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 4807765 - 4807670
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||||||||||||||| |||       || ||| ||||||||||||||| |||||| ||| |||| | ||||||||||    
T  4807765 tgaccccttatctttacaaaaagttgcgattatggccccttttttggaacacgtggcgtcttctcagtaatttttggatgaaatgtgccaaaattg 4807670  T

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Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 12723426 - 12723331
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    |||||| |||||||  ||||||||||||||||||  ||       ||||||  ||||||||||||||||||||| | | |||||||||||||||||    
T  12723426 tgacccgttatctttacaaaaagttgcgattatggtcccttttttgggacacatggcgtcttctcagcaatttttgcatgaaaggggccaaaattg 12723331  T

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Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 117
Target Start/End: Complemental strand, 21666386 - 21666344
Alignment:
Q  75 tggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    |||||||||||||||||||||| |||||| |||||||||||||    
T  21666386 tggcgtcttctcagcaattttgagacgaagggggccaaaattg 21666344  T

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Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 117
Target Start/End: Original strand, 33895558 - 33895607
Alignment:
Q  68 ggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||| ||||||||||||||| |||||| ||| |||||||||||||||||    
T  33895558 ggacacgtggcgtcttctcagaaatttttggatgaaaggggccaaaattg 33895607  T

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Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 17857097 - 17857061
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacc 58  Q
    |||||||||||||||||||||||||| ||||||||||    
T  17857097 tgaccccttatcttctcaaaaagttgtgattatgacc 17857061  T

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Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 3208023 - 3207982
Alignment:
Q  155 caactttttaaaacttatgggatgaaaaatgcactttagcct 196  Q
    ||||||||||||||||| | | ||||||||||||||||||||    
T  3208023 caactttttaaaacttaagaggtgaaaaatgcactttagcct 3207982  T

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Target: chr3 (Bit Score: 55; Significance: 1e-22; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 120
Target Start/End: Original strand, 23320506 - 23320597
Alignment:
Q  28 cttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgtaa 120  Q
    ||||||||||||||||||||| |||||| |||       ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23320506 cttatcttctcaaaaagttgctattatggccccttttt-gggacatgtggcgtcttttcagcaattttgggacgaaaggggccaaaattgtaa 23320597  T

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Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 26628190 - 26628095
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||||||||||||||| |||       |||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  26628190 tgaccccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaattg 26628095  T

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Target: chr3; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 3328978 - 3328883
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||||||||||||||| |||       |||||| |||||||||||||||||||||| ||| |||||||||||||||||    
T  3328978 tgaccccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcagcaatttttggatgaaaggggccaaaattg 3328883  T

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Target: chr3; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 13081033 - 13081128
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||||||||||||||| |||       ||||||||||| ||||||||||||||||||||| ||| |||||||||||||    
T  13081033 tgaccccttatctttacaaaaagttgcgattatggccccttttttgggacatgtggagtcttctcagcaattttgggatgaagggggccaaaattg 13081128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 48907457 - 48907362
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||   ||||||||||||||||| |||       |||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  48907457 tgaccccttatctttaaaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaattg 48907362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 22 - 115
Target Start/End: Complemental strand, 23428784 - 23428691
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaat 115  Q
    ||||||||||||||  ||||||||||||||||||||||       |||||| ||||| |||||| ||||||||||||| |||||||||||||||    
T  23428784 tgaccccttatctttacaaaaagttgcgattatgaccccttttctgggacacgtggcatcttctgagcaattttgggatgaaaggggccaaaat 23428691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 36311292 - 36311385
Alignment:
Q  24 accccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    |||||||||||||||||| ||||||||||| | |||       |||||| ||||| |||||||| |||||||||||||||||||||||||||||    
T  36311292 accccttatcttctcaaatagttgcgattacggcccatattttgggacacgtggcttcttctcaacaattttgggacgaaaggggccaaaattg 36311385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 22416473 - 22416569
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    |||||| |||||||  ||||||||||| ||||||||||       |||||| |||||||||||||| ||||||||||||||| ||||||||||||||    
T  22416473 tgacccattatctttacaaaaagttgcaattatgaccccttatttgggacacgtggcgtcttctcaacaattttgggacgaagggggccaaaattgt 22416569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 4522093 - 4522188
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||||||||||||||  |||       |||||| |||||||||||||||||||||| ||| |||||||||||||||||    
T  4522093 tgaccccttatctttacaaaaagttgcgattattgccccttttttgggacacgtggcgtcttctcagcaattttaggatgaaaggggccaaaattg 4522188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 6927609 - 6927704
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  ||||||||||||||||||||||       |||||| ||||| |||||| ||||||||||||| ||||||||| |||||||    
T  6927609 tgaccccttatctttacaaaaagttgcgattatgaccccttttttgggacacgtggcatcttctgagcaattttgggatgaaaggggctaaaattg 6927704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 8339105 - 8339010
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||||||||||||||| ||        |||||| |||||||||||||||||||||||||| ||| |||||||||||||    
T  8339105 tgaccccttatctttacaaaaagttgcgattatggcctcttttttgggacacgtggcgtcttctcagcaattttgggatgaagggggccaaaattg 8339010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 25022824 - 25022733
Alignment:
Q  26 cccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||  ||||||||||||||||||||||       |||||| ||||| |||||| ||||||||||||| |||||||||||||||||    
T  25022824 cccttatctttacaaaaagttgcgattatgaccccttttctgggacacgtggcatcttctgagcaattttgggatgaaaggggccaaaattg 25022733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 28155047 - 28154952
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||| ||||||||  |||||||||||||||||| |||       |||||| |||||||||||||||||||||| ||| |||||||||||||||||    
T  28155047 tgacctcttatctttacaaaaagttgcgattatggccctttttttgggacacgtggcgtcttctcagcaatttttggatgaaaggggccaaaattg 28154952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 28173894 - 28173799
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  ||||||||||||||||||||||       |||||| ||||| |||||  ||||||||||||| |||||||||||||||||    
T  28173894 tgaccccttatctttacaaaaagttgcgattatgaccccttttctgggacacgtggcatcttccgagcaattttgggatgaaaggggccaaaattg 28173799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 1743388 - 1743483
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    |||||||||||||||||||||||||||||| | | ||        |||||||||||||||||||||||||||||| ||| |||||| | |||||||    
T  1743388 tgaccccttatcttctcaaaaagttgcgataagggccattgttttgggacatgtggcgtcttctcagcaattttgtgacaaaagggactaaaattg 1743483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 10743546 - 10743641
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  ||||||||||||||||||||||       ||| || ||||| |||| | ||||||||||||| |||||||||||||||||    
T  10743546 tgaccccttatctttacaaaaagttgcgattatgaccccttttctgggtcacgtggcatcttttgagcaattttgggatgaaaggggccaaaattg 10743641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 31039143 - 31039048
Alignment:
Q  21 atgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaatt 116  Q
    ||||||| ||||||||| ||||||||||||||||  |||        | |||||||||||||||||||||||||| ||||||||| ||||||||||    
T  31039143 atgaccctttatcttcttaaaaagttgcgattatagccccttttttagaacatgtggcgtcttctcagcaatttttggacgaaagaggccaaaatt 31039048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 32960807 - 32960713
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||||||||||||||| ||        |||||| ||||||||||||||| |||||||||| |||||||||||||||||    
T  32960807 tgaccccttatctttacaaaaagttgcgattatggcc-tttttttgggacacgtggcgtcttctcagtaattttgggatgaaaggggccaaaattg 32960713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 118
Target Start/End: Complemental strand, 30155310 - 30155214
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    ||||||||||||||  |||||||||||||||||| |||       ||||||  |||||||||| ||||||||||  || ||||||||||||||||||    
T  30155310 tgaccccttatctttacaaaaagttgcgattatggccccttttttgggacacatggcgtcttcgcagcaattttttgatgaaaggggccaaaattgt 30155214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 32315059 - 32315154
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    ||||||||||||| ||||||||| |||||| ||| |||        |||||||||||||||||||| ||||||||||||||||||  ||||||||||    
T  32315059 tgaccccttatctcctcaaaaagctgcgat-atggcccatgttttaggacatgtggcgtcttctcaacaattttgggacgaaaggacccaaaattgt 32315154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 115
Target Start/End: Complemental strand, 40836326 - 40836250
Alignment:
Q  39 aaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaat 115  Q
    ||||||||||||||||| |||       |||||| |||||| ||||||||||||||||| |||||||||||||||||    
T  40836326 aaaaagttgcgattatggccccttttttgggacacgtggcggcttctcagcaattttggaacgaaaggggccaaaat 40836250  T

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Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 46673213 - 46673117
Alignment:
Q  22 tgaccccttatcttctcaaaaa-gttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||| ||||||||||||||||        ||||| ||||| |||||| ||||||||||||| |||||||||||||||||    
T  46673213 tgaccccttatctttacaaaaaagttgcgattatgaccccttttctaggacacgtggcatcttctgagcaattttgggatgaaaggggccaaaattg 46673117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 8542749 - 8542844
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  ||||||||||| |||||| |||       | |||| |||||||||||||||||||||||||| ||| || ||||||||||    
T  8542749 tgaccccttatctttacaaaaagttgcaattatggccccttttttgtgacacgtggcgtcttctcagcaattttgggatgaagggagccaaaattg 8542844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 3821021 - 3821103
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaa 104  Q
    |||||| |||||||  ||||||||||||||||||||||       ||||||||||| ||||||||||||||||| ||| ||||    
T  3821021 tgaccctttatctttacaaaaagttgcgattatgaccccttttttgggacatgtggtgtcttctcagcaattttaggatgaaa 3821103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 27852916 - 27852822
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||||||||||||||| |||       |||||| |||||||||||||| ||||||||||  ||| |||||||||||||    
T  27852916 tgaccccttatctttacaaaaagttgcgattatggccccttttt-gggacacgtggcgtcttctcaacaattttgggctgaagggggccaaaattg 27852822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 43668583 - 43668641
Alignment:
Q  38 caaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttg 96  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||||||||    
T  43668583 caaaaagttgcgattatgacccctgttttgggacatgtggcgtcttctcagcaattttg 43668641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 20001851 - 20001943
Alignment:
Q  25 ccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    |||||||| ||||||||||||||||| |||| |||       || ||| |||||||||||||| ||||||||||| |||| ||| ||||||||    
T  20001851 ccccttatattctcaaaaagttgcgactatggcccctgttttggaacacgtggcgtcttctcaacaattttgggatgaaaaggggcaaaattg 20001943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 25179717 - 25179810
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||||||||||||||| |||       |||||| |  ||||||||||||||||||||||| ||| ||||||| |||||    
T  25179717 tgaccccttatctttacaaaaagttgcgattatggccccttttttgggacacg--gcgtcttctcagcaattttgggatgaagggggccataattg 25179810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 117
Target Start/End: Complemental strand, 26177114 - 26177026
Alignment:
Q  29 ttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    |||||||  |||||||||||||||||| ||        ||||| |||||| |||||||||||||||||||||||||  |||||||||||    
T  26177114 ttatctttacaaaaagttgcgattatggcctcttttttgggacttgtggcttcttctcagcaattttgggacgaaataggccaaaattg 26177026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 20626880 - 20626789
Alignment:
Q  29 ttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgtaa 120  Q
    |||||||  ||||||||| |||||||||| |       ||||||||||||||||||| | |||||||||  |||||||||||||||| ||||    
T  20626880 ttatctttacaaaaagttacgattatgactccttttttgggacatgtggcgtcttcttaacaattttggagcgaaaggggccaaaatcgtaa 20626789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 33279703 - 33279655
Alignment:
Q  69 gacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    |||| |||||||||||||||||||||| |||| ||||||| ||||||||    
T  33279703 gacacgtggcgtcttctcagcaatttttggaccaaaggggtcaaaattg 33279655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 26127068 - 26126976
Alignment:
Q  25 ccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    |||||||||||  |||||||||||||||||| ||         |||| |||||||||||||||||||||||| ||||||   |||||||||||    
T  26127068 ccccttatctttacaaaaagttgcgattatggcctctttttttggacttgtggcgtcttctcagcaattttgcgacgaagtaggccaaaattg 26126976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 31039253 - 31039295
Alignment:
Q  155 caactttttaaaacttatgggatgaaaaatgcactttagccta 197  Q
    ||||||||||||||||| ||| |||||| ||||||||||||||    
T  31039253 caactttttaaaacttaaggggtgaaaagtgcactttagccta 31039295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 117
Target Start/End: Original strand, 33105125 - 33105175
Alignment:
Q  67 gggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    |||||| |||||||||||||| ||||||||||| ||||  |||||||||||    
T  33105125 gggacacgtggcgtcttctcatcaattttgggatgaaataggccaaaattg 33105175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 117
Target Start/End: Complemental strand, 34878649 - 34878599
Alignment:
Q  67 gggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    |||||| ||||||||||||||||||||||| || |||| ||| ||||||||    
T  34878649 gggacacgtggcgtcttctcagcaattttgagatgaaatgggtcaaaattg 34878599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 3781017 - 3781099
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaa 104  Q
    |||||| |||||||  ||||||||||||| ||||||||       |||||| |||| ||||||||||||||||| ||| ||||    
T  3781017 tgaccctttatctttacaaaaagttgcgaatatgaccccttttttgggacacgtggtgtcttctcagcaattttaggatgaaa 3781099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 9250183 - 9250146
Alignment:
Q  196 taatattaaatgtgtaatttgatattattgtcaacgtt 233  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  9250183 taatattaaatgtgttatttaatattattgtcaacgtt 9250146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 17197234 - 17197193
Alignment:
Q  196 taatattaaatgtgtaatttgatattattgtcaacgttacga 237  Q
    ||||||||||| ||| |||| |||||||||||||||||||||    
T  17197234 taatattaaatatgtgatttaatattattgtcaacgttacga 17197193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 117
Target Start/End: Complemental strand, 22500714 - 22500665
Alignment:
Q  68 ggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||| ||||||||||||||| |||||| ||| ||||||||| |||||||    
T  22500714 ggacacgtggcgtcttctcagaaatttttggatgaaaggggctaaaattg 22500665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 236
Target Start/End: Original strand, 17137081 - 17137121
Alignment:
Q  196 taatattaaatgtgtaatttgatattattgtcaacgttacg 236  Q
    ||||||||||||||| |||| ||||||||| ||||||||||    
T  17137081 taatattaaatgtgtgatttaatattattgccaacgttacg 17137121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1875 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold1875
Description:

Target: scaffold1875; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 921 - 826
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  ||||||||||| ||||||||||       ||||||| ||||||||||||| ||||||||||||||| |||||||||||||    
T  921 tgaccccttatctttacaaaaagttgcaattatgaccccttatttgggacatctggcgtcttctcaacaattttgggacgaagggggccaaaattg 826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 120
Target Start/End: Original strand, 9171 - 9270
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnn-gggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgtaa 120  Q
    |||||| ||||||| |||||||||||||||||||||||        |||||| ||| |||||||| ||||||||||||||||||||||||||||||||||    
T  9171 tgacccattatcttttcaaaaagttgcgattatgacccccttttttgggacacgtgacgtcttctaagcaattttgggacgaaaggggccaaaattgtaa 9270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 49798 - 49893
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  ||||||||||||||||||||||       |||||| ||||| |||||| ||||||||||||| |||||||||||||||||    
T  49798 tgaccccttatctttacaaaaagttgcgattatgaccccttttctgggacacgtggcatcttctgagcaattttgggatgaaaggggccaaaattg 49893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 62337 - 62432
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  ||||||||||||||||||||||       |||||| ||||| |||||| ||||||||||||| |||||||||||||||||    
T  62337 tgaccccttatctttacaaaaagttgcgattatgaccccttttctgggacacgtggcatcttctgagcaattttgggatgaaaggggccaaaattg 62432  T

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Target: scaffold0025 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 19421 - 19516
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||||||||||||||| |||       |||||| |||||||||||||||||||||| ||| |||| ||||||||||||    
T  19421 tgaccccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcagcaatttttggatgaaatgggccaaaattg 19516  T

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Target: scaffold0025; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 117
Target Start/End: Original strand, 62000 - 62050
Alignment:
Q  67 gggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    |||||| |||||||||||||| ||||||| ||| |||||||||||||||||    
T  62000 gggacacgtggcgtcttctcaacaatttttggatgaaaggggccaaaattg 62050  T

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Target: scaffold0014 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 120
Target Start/End: Original strand, 112266 - 112364
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgtaa 120  Q
    |||| ||||||||||||||||||||||| |||||  ||       |||||||||||||||||||| |||||||| ||||||||  ||||||||||||||    
T  112266 tgactccttatcttctcaaaaagttgcggttatggtccattttttgggacatgtggcgtcttctctgcaattttaggacgaaaaaggccaaaattgtaa 112364  T

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Target: scaffold0406 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 2130 - 2225
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||| ||||||  |||||||||||||||||  |||       |||||| |||||||||||||||||||||| ||| |||||||||||||||||    
T  2130 tgaccccatatctttacaaaaagttgcgattatagccccttttttgggacacgtggcgtcttctcagcaatttttggatgaaaggggccaaaattg 2225  T

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Target: scaffold0060 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 66313 - 66408
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  ||||||||||||||||||||||        | ||| ||||||||||||||| |||||| ||| |||||||||||||||||    
T  66313 tgaccccttatctttacaaaaagttgcgattatgacccctttttttgaacacgtggcgtcttctcagaaatttttggatgaaaggggccaaaattg 66408  T

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Target: scaffold0103 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 118
Target Start/End: Complemental strand, 3093 - 2996
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnnggga-catgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgt 118  Q
    ||||||||||| ||  ||||||||||||||||||||||        ||| ||||||||||||||||  ||||||| ||||||||||||||||||||||    
T  3093 tgaccccttatttttacaaaaagttgcgattatgaccccctttctaggaacatgtggcgtcttctcttcaattttaggacgaaaggggccaaaattgt 2996  T

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Target: scaffold0150 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 5971 - 6065
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||   ||||||||||||||||||||        |||||| ||||| |||||||||||||||||||| ||| |||||||||||||    
T  5971 tgaccccttatctttataaaaagttgcgattatgacc-tttttttgggacacgtggcatcttctcagcaattttgggatgaagggggccaaaattg 6065  T

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Target: scaffold0087 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 117
Target Start/End: Complemental strand, 25084 - 25034
Alignment:
Q  67 gggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    |||||| |||||||||||||||||||||||| | |||||||||||||||||    
T  25084 gggacacgtggcgtcttctcagcaattttggtatgaaaggggccaaaattg 25034  T

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Target: scaffold0001 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 142112 - 142017
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||| ||||||||  |||||||||||||||||| |||       |||||| |||||||||||| |||||||||  || |||||||||||||||||    
T  142112 tgacctcttatctttacaaaaagttgcgattatggcccattttttgggacacgtggcgtcttctaagcaatttttagatgaaaggggccaaaattg 142017  T

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Target: scaffold0179 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 5814 - 5720
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||||||||||||||| |||       |||||| ||||||||||| ||||||||||||||  |||||| |||||||||    
T  5814 tgaccccttatctttacaaaaagttgcgattatggccctttttt-gggacacgtggcgtcttcgcagcaattttgggataaaagggaccaaaattg 5720  T

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Target: scaffold0419 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 117
Target Start/End: Complemental strand, 3080 - 3030
Alignment:
Q  67 gggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    |||||| |||||||||||||| ||||||||||| ||| |||||||||||||    
T  3080 gggacacgtggcgtcttctcatcaattttgggatgaagggggccaaaattg 3030  T

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Target: scaffold0007 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 250683 - 250588
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgacccnnnnnnngggacatgtggcgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    ||||||||||||||  |||||||||| ||||||| |||       ||| || ||||||||||||||||||||||  || ||| |||||||||||||    
T  250683 tgaccccttatctttacaaaaagttgtgattatggccccttttttggggcacgtggcgtcttctcagcaattttcagatgaagggggccaaaattg 250588  T

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Target: scaffold0683 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0683
Description:

Target: scaffold0683; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 117
Target Start/End: Complemental strand, 5230 - 5191
Alignment:
Q  78 cgtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    |||||||||||||||||| ||| |||||||||||||||||    
T  5230 cgtcttctcagcaatttttggatgaaaggggccaaaattg 5191  T

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Target: scaffold0187 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 71 - 117
Target Start/End: Original strand, 4934 - 4981
Alignment:
Q  71 catgtggc-gtcttctcagcaattttgggacgaaaggggccaaaattg 117  Q
    |||||||| ||||||||||||||||||||| |||||||| ||||||||    
T  4934 catgtggctgtcttctcagcaattttgggatgaaaggggtcaaaattg 4981  T

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Target: scaffold1202 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1202
Description:

Target: scaffold1202; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 1939 - 1902
Alignment:
Q  22 tgaccccttatcttctcaaaaagttgcgattatgaccc 59  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  1939 tgaccccttatctttacaaaaagttgcgattatgaccc 1902  T

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Target: scaffold0390 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 13429 - 13389
Alignment:
Q  196 taatattaaatgtgtaatttgatattattgtcaacgttacg 236  Q
    ||||||||||| ||| |||| ||||||||||||||||||||    
T  13429 taatattaaatatgtgatttaatattattgtcaacgttacg 13389  T

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Target: scaffold0063 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 236
Target Start/End: Original strand, 6250 - 6290
Alignment:
Q  196 taatattaaatgtgtaatttgatattattgtcaacgttacg 236  Q
    ||||||||||| ||| |||| ||||||||||||||||||||    
T  6250 taatattaaatatgtgatttaatattattgtcaacgttacg 6290  T

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