View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12795_low_15 (Length: 242)
Name: NF12795_low_15
Description: NF12795
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12795_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 28647756 - 28647978
Alignment:
| Q |
1 |
ttagtttagttataatatacatctataactaaactaggaaaagtaggaatatgagattatggaaacatgttgatgaaacaagtaaccaaatttcggagag |
100 |
Q |
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| T |
28647756 |
ttagtttagttataatatacatctataactaaactaggaaaagtaggaatatgagattgtggaaacatgttgatgaaacaaataaccaaatttcggagag |
28647855 |
T |
|
| Q |
101 |
agctacccctcttcttgaagtttggagattgaccaaggtggtgaaagcaaatggacatagcagtttgaatactataaatggtgtgcatcaatagcagaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28647856 |
agctacccctcttcttgaagtttggagattgaccaaggtggtgaaagcaaatggacatagcagtttgaatactataaatggtgtgcatcaatagcagaat |
28647955 |
T |
|
| Q |
201 |
ggtgctaggggaagagacggtcg |
223 |
Q |
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|||||||||||||||||| |||| |
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| T |
28647956 |
ggtgctaggggaagagacagtcg |
28647978 |
T |
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