View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12797_high_17 (Length: 290)
Name: NF12797_high_17
Description: NF12797
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12797_high_17 |
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Alignment Details
Target: chr3 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 19 - 272
Target Start/End: Original strand, 26080209 - 26080461
Alignment:
| Q |
19 |
cttatagggttgtggttgggcctcattatgctaaagttgcatgaatattcagtttgaactatgacagaatcgcatggtgaatatgctaaacataatttag |
118 |
Q |
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| T |
26080209 |
cttatagggttgtggttgggcctcattatgctaaagttgcatgaatattcagtatgaactgtgacagaatcgcatggtgaacatgctaaacataatttag |
26080308 |
T |
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| Q |
119 |
agtaatagaatgttttttaggccacatttaaggcatacctatgtaaaagggtgtaccggtcctccatcacttatttaccattagatttaatttgtttaac |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |
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| T |
26080309 |
agtaatagaatgttttttaggccacatttaaggcatacctatgtaaaagggtgtaccgat-ctccatcacttatttaccattagatttaatttgtttaac |
26080407 |
T |
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| Q |
219 |
tgatgagtcagatttaaaagggtatatttggtaacatttcttgtcccttcccct |
272 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26080408 |
tgatgagtcagatttaaaagggtatatttggtaacatttcttgtcccttcccct |
26080461 |
T |
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