View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12797_high_31 (Length: 219)
Name: NF12797_high_31
Description: NF12797
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12797_high_31 |
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Alignment Details
Target: chr6 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 16 - 202
Target Start/End: Original strand, 59705 - 59891
Alignment:
| Q |
16 |
agaatataaggaatagttatgcctcttggttgatgagaaaattgaacaactctaaactttactaccacaaataaaggtctgtttgtgtaaaagtataggt |
115 |
Q |
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| T |
59705 |
agaatataaggaatagttatgcctcttggttgatgagaaaattgaacaactctaaactttactaccacaaataaaggtctgtttgtgtaaaagtataggt |
59804 |
T |
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| Q |
116 |
atatgccagctcacacaaagtacaagttgcctcatattgtcatctcaatctaaaagctccatggataagctagcttatggtacaagc |
202 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
59805 |
atatgccagctcacacaaagtacaagtttcctcatattgtcatctcaatctaaaagctccatggataagctagcttatggtacaagc |
59891 |
T |
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