View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1279_low_12 (Length: 280)
Name: NF1279_low_12
Description: NF1279
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1279_low_12 |
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Alignment Details
Target: chr7 (Bit Score: 149; Significance: 9e-79; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 48159583 - 48159770
Alignment:
| Q |
1 |
aagaaatgcaatcgtgtaggcaatactttgaacactgccaaccttgttgttgttgttcggcgaaatcttatatcatttttaattataatatttgaatttg |
100 |
Q |
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| T |
48159583 |
aagaaatgcaatcgtgtaggcaatactttgaacactgccaaccttgttgttgttgttcggcgaaatcttatatcatttttaattataatatttgaatttg |
48159682 |
T |
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| Q |
101 |
cacccaatgttgccatatacattctatatctatattcaaatcctcaatattagaatgaagcaattccaccttgcaaattggaggtgcagtggaataataa |
200 |
Q |
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| T |
48159683 |
cacccaatgttgccatatacattctatatct---------------atattagaatgaagcaattccacctttcaaattggaggtgcagtggaataataa |
48159767 |
T |
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