View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1279_low_9 (Length: 318)
Name: NF1279_low_9
Description: NF1279
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1279_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 176; Significance: 8e-95; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 115 - 294
Target Start/End: Complemental strand, 27778536 - 27778357
Alignment:
| Q |
115 |
tcttgagcaattctataactttgattcaactcagcacacatatttgatgaactaagacaactctttattccatcccatttatgtgaacttctaacccttc |
214 |
Q |
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| T |
27778536 |
tcttgagcaattctataactttgattcaactcagcacacatatttgatgaactaagacaactctttattccatcccatttatgtgaacttctaacccttc |
27778437 |
T |
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| Q |
215 |
tacgaagccaaaatgaaaaatcatccacacgatattctaaatatgacctattaggttcaatattcccatgacctctaagt |
294 |
Q |
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| T |
27778436 |
tacgaagccaaaatgaaaaatcatccactcgatattctaaatatgacctattaggttcaatattcccatgacctctaagt |
27778357 |
T |
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